AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0050320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0050320 MtrunA17_Chr1g0165651 98.634 952 12 1 3 954 4 954 0.0 1944
Msa0050320 MtrunA17_Chr7g0257921 34.993 683 373 17 256 928 13 634 4.24e-107 346
Msa0050320 MtrunA17_Chr5g0400101 35.205 463 260 15 472 925 470 901 8.18e-57 213
Msa0050320 MtrunA17_Chr5g0422511 31.306 444 239 12 490 911 330 729 2.78e-40 160
Msa0050320 MtrunA17_Chr7g0228141 28.482 481 258 12 447 905 336 752 1.16e-36 149
Msa0050320 MtrunA17_Chr5g0394941 28.898 481 260 18 469 923 385 809 1.50e-35 145
Msa0050320 MtrunA17_Chr2g0304151 28.810 479 260 17 470 923 387 809 3.16e-35 145
Msa0050320 MtrunA17_Chr8g0343741 25.628 597 290 22 486 950 707 1281 1.98e-30 130
Msa0050320 MtrunA17_Chr2g0334291 28.008 507 234 16 524 922 1578 2061 2.07e-30 130
Msa0050320 MtrunA17_Chr1g0173701 33.203 256 147 7 664 911 111 350 4.35e-27 115
Msa0050320 MtrunA17_Chr5g0433321 33.993 303 167 10 630 919 557 839 3.41e-26 115
Msa0050320 MtrunA17_Chr8g0375181 33.673 294 165 10 630 911 631 906 8.09e-26 115
Msa0050320 MtrunA17_Chr3g0109551 31.293 294 173 9 630 911 614 890 1.50e-25 114
Msa0050320 MtrunA17_Chr3g0109541 31.447 318 186 11 607 911 557 855 2.31e-25 113
Msa0050320 MtrunA17_Chr5g0433371 32.667 300 175 10 630 919 581 863 6.74e-25 112
Msa0050320 MtrunA17_Chr5g0433471 32.237 304 172 10 630 919 579 862 1.86e-24 110
Msa0050320 MtrunA17_Chr5g0433421 32.660 297 164 11 630 911 664 939 1.86e-23 107
Msa0050320 MtrunA17_Chr8g0375151 31.741 293 169 11 630 911 526 798 1.97e-23 107
Msa0050320 MtrunA17_Chr5g0433361 31.864 295 160 13 630 911 559 825 2.29e-21 100
Msa0050320 MtrunA17_Chr3g0094211 28.383 303 189 9 630 921 547 832 1.53e-20 97.8
Msa0050320 MtrunA17_Chr8g0375191 31.126 302 172 12 623 911 551 829 2.30e-20 97.8
Msa0050320 MtrunA17_Chr5g0433511 29.070 258 153 10 630 875 598 837 2.22e-12 71.2
Msa0050320 MtrunA17_Chr5g0433331 36.735 98 58 1 826 919 8 105 1.72e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0050320 AT5G35970.1 73.760 907 217 4 65 953 57 960 0.0 1347
Msa0050320 AT2G03270.1 34.307 685 376 16 256 928 7 629 1.60e-109 352
Msa0050320 AT5G47010.1 35.546 467 253 15 472 925 482 913 7.87e-58 217
Msa0050320 AT4G15570.3 30.508 472 249 17 489 933 337 756 2.12e-39 158
Msa0050320 AT4G15570.1 30.508 472 249 17 489 933 337 756 2.12e-39 158
Msa0050320 AT4G15570.2 30.508 472 249 17 489 933 248 667 3.77e-39 156
Msa0050320 AT4G15570.4 30.508 472 249 17 489 933 248 667 3.77e-39 156
Msa0050320 AT1G08840.1 29.158 463 255 12 473 925 882 1281 3.61e-38 155
Msa0050320 AT1G08840.4 29.158 463 255 12 473 925 914 1313 4.06e-38 155
Msa0050320 AT1G08840.3 29.158 463 255 12 473 925 917 1316 4.07e-38 155
Msa0050320 AT1G08840.2 29.158 463 255 12 473 925 901 1300 4.20e-38 155
Msa0050320 AT1G05460.2 29.333 450 245 16 493 921 412 809 5.12e-32 135
Msa0050320 AT1G05460.1 29.333 450 245 16 493 921 412 809 7.72e-32 134
Msa0050320 AT2G19120.1 32.738 336 189 12 633 952 753 1067 2.45e-30 130
Msa0050320 AT1G16800.3 27.976 504 218 19 525 911 1429 1904 1.55e-27 121
Msa0050320 AT1G16800.2 27.856 499 225 18 525 911 1499 1974 1.84e-27 121
Msa0050320 AT1G16800.1 27.856 499 225 18 525 911 1387 1862 2.05e-27 121
Msa0050320 AT4G30100.2 26.838 544 254 21 496 911 660 1187 9.83e-27 118
Msa0050320 AT4G30100.1 26.838 544 254 21 496 911 660 1187 9.83e-27 118
Msa0050320 AT5G52090.1 27.424 361 240 9 559 911 270 616 1.23e-26 117
Msa0050320 AT5G37150.1 30.743 296 172 10 630 911 503 779 2.55e-25 113
Msa0050320 AT5G37140.1 30.128 312 183 11 630 928 361 650 1.43e-23 107
Msa0050320 AT1G65780.1 32.787 305 180 8 626 919 536 826 2.46e-23 107
Msa0050320 AT1G65810.2 30.952 336 195 12 600 919 497 811 4.75e-23 106
Msa0050320 AT1G65810.1 30.952 336 195 12 600 919 497 811 5.36e-23 106
Msa0050320 AT1G65810.3 30.952 336 195 12 600 919 497 811 8.30e-23 105
Msa0050320 AT5G37030.1 27.174 460 259 19 473 912 198 601 1.17e-22 104
Msa0050320 AT4G05540.1 30.068 296 174 10 630 911 407 683 4.26e-22 102
Msa0050320 AT5G37165.1 26.207 290 194 5 630 911 89 366 6.33e-22 100

Find 209 sgRNAs with CRISPR-Local

Find 335 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTACTTTCTCTAAACTATT+TGG 0.122471 1_2:-4083803 Msa0050320:CDS
GTCGAAACCGATTGAGTTCT+TGG 0.178361 1_2:-4084326 Msa0050320:CDS
GAATCCAATGTTACCTTCTA+TGG 0.206751 1_2:-4080921 Msa0050320:CDS
CTTAAGGAGCTTGCCAATTC+AGG 0.260604 1_2:-4085318 Msa0050320:intron
CCCCTCAAACAATTGCTTAT+AGG 0.261799 1_2:+4080852 None:intergenic
ATACTCATGCATGAAAATTA+TGG 0.288033 1_2:-4080729 Msa0050320:three_prime_UTR
TGCTGAGTTACTTGAAGATT+TGG 0.290589 1_2:-4085574 Msa0050320:CDS
ATGCATAACACTTGCATCTA+TGG 0.290906 1_2:+4080639 None:intergenic
AGAAGAATAGTTTGGTAGAT+TGG 0.291762 1_2:-4083200 Msa0050320:CDS
TCTGTTGTTGCAACTCTATT+CGG 0.305233 1_2:-4083249 Msa0050320:CDS
ATCATTACCAGCATAAATTA+AGG 0.306461 1_2:+4081698 None:intergenic
TGAAGATGATGAAGCTAGTT+TGG 0.307407 1_2:+4085914 None:intergenic
TGAGAAGTTCTGACATGTTT+TGG 0.312836 1_2:+4084428 None:intergenic
CATCGTTTCGCCTGCAATAT+AGG 0.322895 1_2:+4082556 None:intergenic
CAATGCAGCTGTTGATAATA+TGG 0.324332 1_2:-4082977 Msa0050320:CDS
CTAGCTTCATCATCTTCATT+TGG 0.327143 1_2:-4085909 Msa0050320:CDS
GGGAAAGTCGCTAAAGAAAA+AGG 0.330531 1_2:-4082731 Msa0050320:CDS
AAGTGTTATGCATGATACTA+TGG 0.335856 1_2:-4080629 Msa0050320:three_prime_UTR
CCCTACCAAAGTGTCGAATA+TGG 0.337657 1_2:+4080993 None:intergenic
AAGGCATTAGAAGGTGGTTT+AGG 0.346964 1_2:-4082484 Msa0050320:CDS
CACTCTTTCACCCGGAGAAA+TGG 0.354961 1_2:-4083948 Msa0050320:CDS
GACTGAACTACAATAGCATT+TGG 0.358638 1_2:+4081518 None:intergenic
AGCATTTAGCTTTCGAATCA+TGG 0.361465 1_2:+4082636 None:intergenic
CCAACATCTTTCCATCCAAT+AGG 0.361650 1_2:+4085657 None:intergenic
GTTGCAACAACAGAAATTGA+TGG 0.369280 1_2:+4083258 None:intergenic
TCGGAAGCATCATCTTGTTT+AGG 0.371391 1_2:+4084352 None:intergenic
TATTGAAAGGGATGTTGAAT+TGG 0.371567 1_2:-4084404 Msa0050320:CDS
GTTGAAAAGCTTTCAAATGT+TGG 0.374768 1_2:-4082955 Msa0050320:CDS
CAACATCTTTCCATCCAATA+GGG 0.376611 1_2:+4085658 None:intergenic
ACTTCAGTACCGGCAGCTTC+AGG 0.378086 1_2:+4081446 None:intergenic
AACCCTCCTCCAAAACTATC+TGG 0.381690 1_2:+4080956 None:intergenic
TTGCTGGATTCCTATATTGC+AGG 0.383652 1_2:-4082566 Msa0050320:CDS
GGGATCGGCTGCTCCGGTAT+TGG 0.385776 1_2:+4082657 None:intergenic
TTTGGAGGAGGGTTTGGACT+TGG 0.385868 1_2:-4080947 Msa0050320:CDS
AGAGGAAGAAATCTGATCTA+AGG 0.393500 1_2:-4082822 Msa0050320:CDS
ATAGGAACAGCATTCAAATA+AGG 0.395012 1_2:+4085492 None:intergenic
GAAGAATAGTTTGGTAGATT+GGG 0.397230 1_2:-4083199 Msa0050320:CDS
CACGTAGAACCAGATAGTTT+TGG 0.398663 1_2:-4080965 Msa0050320:CDS
CGCATTTACAATTTCTCCTA+AGG 0.404693 1_2:+4082873 None:intergenic
GGAATAAATATTGTTCGAGT+TGG 0.408855 1_2:-4082934 Msa0050320:CDS
CACATAGCTCTTGCTGAGGC+TGG 0.409605 1_2:+4084293 None:intergenic
AAAACTCCTTGGACACTCTT+AGG 0.412479 1_2:+4084505 None:intergenic
ACAACTGGTGTCATGAGTTC+AGG 0.413264 1_2:+4080586 None:intergenic
AGGCAATTGAACCGTCTTGC+TGG 0.414062 1_2:-4082582 Msa0050320:CDS
ACGTGAGAGTATGAAATCTA+TGG 0.416536 1_2:-4085613 Msa0050320:CDS
GTAAAGGTTTGGTTGAAGAT+TGG 0.417519 1_2:-4085365 Msa0050320:CDS
TTGGGAGCTGTCGGATTCCT+TGG 0.417961 1_2:-4081124 Msa0050320:CDS
TTCCCAACTGTTTCAGAAGT+TGG 0.421180 1_2:+4082749 None:intergenic
ATGGCTTGAGAAGAATAGTT+TGG 0.421263 1_2:-4083208 Msa0050320:CDS
AGTTGAACTTGAGCAACATA+TGG 0.426082 1_2:+4081494 None:intergenic
AGATATGCAGAGTAAAGGTT+TGG 0.428977 1_2:-4085376 Msa0050320:CDS
TTCTGAAATGAAACAAAGAA+TGG 0.429448 1_2:-4085547 Msa0050320:CDS
GTGCGCATTGATCGTATTCA+AGG 0.431412 1_2:-4083773 Msa0050320:CDS
GAATGATGCCATTGCAAGTT+GGG 0.434868 1_2:-4082386 Msa0050320:CDS
TATTATTTGCTTGAGTAAAC+CGG 0.436762 1_2:+4083047 None:intergenic
CAGCAGAGAGCAATTGCGTT+AGG 0.442940 1_2:-4083126 Msa0050320:CDS
CATCTAGATCAGGCTGGAAC+AGG 0.444736 1_2:-4081771 Msa0050320:CDS
GAATAAGAAGAGGCCACTAT+TGG 0.445426 1_2:-4083100 Msa0050320:CDS
CTTCACGTGCATGAGAATAT+AGG 0.445779 1_2:-4085684 Msa0050320:CDS
GCGAAACGATGCATTCTTGT+TGG 0.447574 1_2:-4082544 Msa0050320:CDS
CAAGGAGTTGTGGAAAATCT+AGG 0.450398 1_2:-4083875 Msa0050320:CDS
GATAGAAATCAGTACCTCAT+AGG 0.456201 1_2:+4083733 None:intergenic
CTGGTGTTATTCAAGATTGA+AGG 0.459300 1_2:-4083992 Msa0050320:CDS
ATCCAAGGACCTCCCGGTAC+AGG 0.464985 1_2:-4083075 Msa0050320:CDS
GCCTATAAGCAATTGTTTGA+GGG 0.466799 1_2:-4080853 Msa0050320:three_prime_UTR
GCTCTTGCTGAGGCTGGCTA+TGG 0.468449 1_2:+4084299 None:intergenic
CTTCAAGATATGCAGAGTAA+AGG 0.468784 1_2:-4085381 Msa0050320:CDS
CATATTATCAACAGCTGCAT+TGG 0.469527 1_2:+4082978 None:intergenic
GCATTTCTAAATGTGTTTCA+AGG 0.470340 1_2:+4080874 None:intergenic
TTGCAACACTAATCCATAGA+AGG 0.470626 1_2:+4080908 None:intergenic
TGCCTATAAGCAATTGTTTG+AGG 0.471982 1_2:-4080854 Msa0050320:three_prime_UTR
CCAAATAGTTTAGAGAAAGT+AGG 0.472362 1_2:+4083803 None:intergenic
GAGTTTAATACCTTAACAAA+AGG 0.472809 1_2:+4082292 None:intergenic
TCAGTCTTGGAAGTTGCTTA+AGG 0.472856 1_2:-4085334 Msa0050320:CDS
GATGGCATTTAAATTACAAA+TGG 0.474378 1_2:+4084267 None:intergenic
CATTGATCGTATTCAAGGAT+TGG 0.479648 1_2:-4083768 Msa0050320:CDS
TTCTTGCATGCAAGGAGTTG+TGG 0.480322 1_2:-4083885 Msa0050320:CDS
TGCCTGTACCGGGAGGTCCT+TGG 0.481597 1_2:+4083073 None:intergenic
CATTGCAAGTTGGGCTTCGA+AGG 0.482049 1_2:-4082377 Msa0050320:CDS
CCGTATGGAAGTCTTTCAAT+TGG 0.483134 1_2:-4081804 Msa0050320:CDS
ACAGTAGCATCAAAGTCCTT+AGG 0.484479 1_2:-4082889 Msa0050320:CDS
AGGGATGATTCATTAGCTGC+AGG 0.486808 1_2:-4082778 Msa0050320:CDS
ACTGAACTACAATAGCATTT+GGG 0.487577 1_2:+4081519 None:intergenic
TGAAGTTCTATCTAGTGCTC+AGG 0.488890 1_2:-4082692 Msa0050320:CDS
AAGATCTAAGACAATGTTTG+AGG 0.490016 1_2:-4082798 Msa0050320:CDS
TCTGAAATGAAACAAAGAAT+GGG 0.491088 1_2:-4085546 Msa0050320:CDS
AAAATATCACAGGAGCTAGT+TGG 0.492157 1_2:+4082512 None:intergenic
TCTCACACAAACCATTTCTC+CGG 0.493829 1_2:+4083937 None:intergenic
GCATTTAGCTTTCGAATCAT+GGG 0.496716 1_2:+4082637 None:intergenic
GAGAATATAGGTGACCCTAT+TGG 0.497072 1_2:-4085672 Msa0050320:CDS
AATCATGGGATCGGCTGCTC+CGG 0.497771 1_2:+4082651 None:intergenic
GTTGAACTTGAGCAACATAT+GGG 0.498421 1_2:+4081495 None:intergenic
CGCCAACTTCTGAAACAGTT+GGG 0.498428 1_2:-4082751 Msa0050320:CDS
CTCAATCGGTTTCGACGGAT+CGG 0.498763 1_2:+4084333 None:intergenic
AACCCTTTCACCTTGTTCCA+CGG 0.498978 1_2:+4083017 None:intergenic
ATCGGCTGCTCCGGTATTGG+TGG 0.499889 1_2:+4082660 None:intergenic
TGATGTTGTTGCAGCCTACA+TGG 0.499973 1_2:-4081866 Msa0050320:intron
TAAACCGGTCTTGCCTGTAC+CGG 0.501079 1_2:+4083062 None:intergenic
ATTCTTGTTCATATTCTCAA+AGG 0.503307 1_2:+4085707 None:intergenic
GTTGTGCTTGCCACCAATAC+CGG 0.504279 1_2:-4082670 Msa0050320:CDS
CGCCGTGGAACAAGGTGAAA+GGG 0.506862 1_2:-4083019 Msa0050320:CDS
ATGCTTGCGCGCTCTTGTGA+TGG 0.509880 1_2:+4081078 None:intergenic
TGTCATAGATGAAGCTGGAC+AGG 0.510157 1_2:-4082602 Msa0050320:CDS
TAGGTACGATCAAACACATT+GGG 0.510293 1_2:-4081142 Msa0050320:CDS
AATGCTGTTCCTATGCCACT+TGG 0.510987 1_2:-4085483 Msa0050320:CDS
GGCTGATACACTTACCTATG+AGG 0.511446 1_2:-4083747 Msa0050320:intron
GCCATATTCGACACTTTGGT+AGG 0.513271 1_2:-4080994 Msa0050320:CDS
CAGAACTTCTCAATATTGAA+AGG 0.513339 1_2:-4084417 Msa0050320:CDS
TGTCCATTCCTAAAACTCCT+TGG 0.515753 1_2:+4084494 None:intergenic
AATGCCATCAGTACCTCTAC+AGG 0.516644 1_2:-4084253 Msa0050320:intron
ATGAGAAAAGACAGTCTTGG+AGG 0.517016 1_2:+4082330 None:intergenic
CCTCCCGGTACAGGCAAGAC+CGG 0.518071 1_2:-4083066 Msa0050320:CDS
AGGATTGGGAGGAATGCATC+TGG 0.522459 1_2:-4084011 Msa0050320:CDS
GTCTCATGTTACAATTATTG+TGG 0.524185 1_2:+4080696 None:intergenic
TGGCTAACCAAGAACTCAAT+CGG 0.529869 1_2:+4084319 None:intergenic
AGAACTTCTCAATATTGAAA+GGG 0.529997 1_2:-4084416 Msa0050320:CDS
TTCTTGTTCATATTCTCAAA+GGG 0.531283 1_2:+4085708 None:intergenic
TTGCGAAGAGCATCTAGATC+AGG 0.532387 1_2:-4081781 Msa0050320:CDS
GACGGGGTTCCTGAAGCTGC+CGG 0.532397 1_2:-4081455 Msa0050320:CDS
CTCACACAAACCATTTCTCC+GGG 0.532657 1_2:+4083938 None:intergenic
ATGCGCCATATTCGACACTT+TGG 0.533794 1_2:-4080998 Msa0050320:CDS
TGGGCTTCGAAGGAGATGTA+TGG 0.534352 1_2:-4082367 Msa0050320:CDS
ATTGGCGTCAAACTCAGTCT+TGG 0.534814 1_2:-4085347 Msa0050320:CDS
GTTACAACTTCTTGCATGCA+AGG 0.534893 1_2:-4083893 Msa0050320:CDS
CCTATTGGATGGAAAGATGT+TGG 0.535687 1_2:-4085657 Msa0050320:CDS
GTTCAATTGCAGCTCAGCAC+AGG 0.536033 1_2:-4084552 Msa0050320:intron
TTTAGGAATGGACAGAGAAA+GGG 0.536782 1_2:-4084485 Msa0050320:CDS
GCGCCGTGGAACAAGGTGAA+AGG 0.540009 1_2:-4083020 Msa0050320:CDS
CTTCGAAGCCCAACTTGCAA+TGG 0.540846 1_2:+4082378 None:intergenic
GGTCCTTGGATAACCAATAG+TGG 0.541765 1_2:+4083087 None:intergenic
AAAGAGTGGTAGGTGGCAAT+CGG 0.542226 1_2:+4083963 None:intergenic
CTCAGCACAGGGCAGTTGCA+AGG 0.542941 1_2:-4084540 Msa0050320:CDS
GAGCTGCAACTCTGCATGAA+GGG 0.544095 1_2:-4082444 Msa0050320:CDS
AGAGCTGCAACTCTGCATGA+AGG 0.548566 1_2:-4082445 Msa0050320:CDS
AAGATGAGAAAAGACAGTCT+TGG 0.548973 1_2:+4082327 None:intergenic
TGTTGAATTGGAGTTTACTC+AGG 0.549406 1_2:-4084392 Msa0050320:CDS
CCTATAAGCAATTGTTTGAG+GGG 0.551618 1_2:-4080852 Msa0050320:three_prime_UTR
AAACCGGTCTTGCCTGTACC+GGG 0.552229 1_2:+4083063 None:intergenic
ACAGGCTCGTTGTATAATGA+AGG 0.558434 1_2:-4081753 Msa0050320:CDS
GAGGATGTTGTTGACAAAGA+AGG 0.558454 1_2:+4086090 None:intergenic
TAGCTTTCGAATCATGGGAT+CGG 0.559505 1_2:+4082642 None:intergenic
ACGCCAACTTCTGAAACAGT+TGG 0.559556 1_2:-4082752 Msa0050320:CDS
ACTTCAAGACCAAGTGGCAT+AGG 0.563752 1_2:+4085474 None:intergenic
AGATCTAAGACAATGTTTGA+GGG 0.563780 1_2:-4082797 Msa0050320:CDS
CCACCTACCACTCTTTCACC+CGG 0.565373 1_2:-4083956 Msa0050320:CDS
TTGCAACTCTATTCGGCGAA+GGG 0.566204 1_2:-4083242 Msa0050320:CDS
GTTGCAACTCTATTCGGCGA+AGG 0.568653 1_2:-4083243 Msa0050320:CDS
ATAACATGCGCCGTGGAACA+AGG 0.575282 1_2:-4083027 Msa0050320:CDS
TTGGTTATCCAAGGACCTCC+CGG 0.575336 1_2:-4083081 Msa0050320:CDS
ACCTTGAAAACTATCAATTG+TGG 0.580698 1_2:+4081421 None:intergenic
AATTGTGGAAACTTCAGTAC+CGG 0.581431 1_2:+4081436 None:intergenic
TTGGTTGTCATAGATGAAGC+TGG 0.583914 1_2:-4082607 Msa0050320:CDS
GGGTCAAAGTGTTACAGCAA+AGG 0.584641 1_2:-4084465 Msa0050320:CDS
CGTTAGGTTTGAATAAGAAG+AGG 0.584662 1_2:-4083110 Msa0050320:CDS
CATTTCTCCGGGTGAAAGAG+TGG 0.585965 1_2:+4083949 None:intergenic
TTGCAATGGCATCATTCATA+CGG 0.586486 1_2:+4082392 None:intergenic
TCAAACACATTGGGAGCTGT+CGG 0.588322 1_2:-4081133 Msa0050320:CDS
CTTGACACTCGAATGCCGTA+TGG 0.588670 1_2:-4081819 Msa0050320:CDS
ACACAGCCTAAGAGTGTCCA+AGG 0.588984 1_2:-4084511 Msa0050320:CDS
TAATCCATAGAAGGTAACAT+TGG 0.591798 1_2:+4080917 None:intergenic
TATGGCGCATAAGTCTTGCT+AGG 0.591965 1_2:+4081011 None:intergenic
TGAATTGGAGTTTACTCAGG+AGG 0.593494 1_2:-4084389 Msa0050320:CDS
GCCTTTCTAGAAAATATCAC+AGG 0.593978 1_2:+4082502 None:intergenic
CCATATTCGACACTTTGGTA+GGG 0.594215 1_2:-4080993 Msa0050320:CDS
TGAATGATGCCATTGCAAGT+TGG 0.596245 1_2:-4082387 Msa0050320:CDS
TCTAGAAAGGCATTAGAAGG+TGG 0.596468 1_2:-4082490 Msa0050320:CDS
TTCAATTGCAGCTCAGCACA+GGG 0.597992 1_2:-4084551 Msa0050320:intron
ATATAGGTGACCCTATTGGA+TGG 0.598984 1_2:-4085668 Msa0050320:CDS
TTATCAACAGCTGCATTGGT+AGG 0.599783 1_2:+4082982 None:intergenic
CACAAACAGCAATGAAACAA+AGG 0.600512 1_2:-4085799 Msa0050320:CDS
GCGAAGGGGAAGATGCTGCA+TGG 0.603321 1_2:-4083227 Msa0050320:CDS
ACATCAACTTGCTTCTTCTG+TGG 0.603336 1_2:-4085954 Msa0050320:CDS
AATACCTGTAGAGGTACTGA+TGG 0.603865 1_2:+4084249 None:intergenic
AGTGGTTAAGTATATAAGCA+TGG 0.604206 1_2:+4086041 None:intergenic
CGAGTGTCAAGAAGTAGTAG+AGG 0.608622 1_2:+4081831 None:intergenic
AGTGTTATGCATGATACTAT+GGG 0.610221 1_2:-4080628 Msa0050320:three_prime_UTR
GAGTGGTAGGTGGCAATCGG+TGG 0.614362 1_2:+4083966 None:intergenic
TCTCCGGGTGAAAGAGTGGT+AGG 0.619341 1_2:+4083953 None:intergenic
AGGCCACTATTGGTTATCCA+AGG 0.620754 1_2:-4083090 Msa0050320:CDS
TGATTCTTCTGCTATCGCCA+AGG 0.624032 1_2:+4081107 None:intergenic
GGACACTGTGTTATCCATGT+AGG 0.625911 1_2:+4081852 None:intergenic
TGCAACTCTATTCGGCGAAG+GGG 0.630223 1_2:-4083241 Msa0050320:CDS
GTCTTGCTAGGAACGTGTTG+TGG 0.630547 1_2:+4081023 None:intergenic
TCTCTGCTGAGATTTATCAA+AGG 0.633256 1_2:+4083140 None:intergenic
AAGAACTCAATCGGTTTCGA+CGG 0.634115 1_2:+4084328 None:intergenic
TGTGAGAACATGTGACAGCA+AGG 0.642149 1_2:-4083921 Msa0050320:CDS
GCAAATAATAACATGCGCCG+TGG 0.645010 1_2:-4083034 Msa0050320:CDS
GTAAAAGAGAATACCTGTAG+AGG 0.649202 1_2:+4084240 None:intergenic
GAAGAGCATCTAGATCAGGC+TGG 0.650620 1_2:-4081777 Msa0050320:CDS
CAAGTAACTTCAAGACCAAG+TGG 0.651955 1_2:+4085468 None:intergenic
ATAGGTACGATCAAACACAT+TGG 0.652032 1_2:-4081143 Msa0050320:intron
ATGGCGTGACTCTAAAGCAA+CGG 0.653491 1_2:+4083832 None:intergenic
ATGAAGGGATTCTCACCACT+AGG 0.660150 1_2:-4082429 Msa0050320:CDS
AATATAGGAATCCAGCAAGA+CGG 0.662472 1_2:+4082571 None:intergenic
CCAATTGAAAGACTTCCATA+CGG 0.665067 1_2:+4081804 None:intergenic
GCTTCGAAGGAGATGTATGG+AGG 0.667867 1_2:-4082364 Msa0050320:CDS
TGAATAACAAACGTAAGACC+TGG 0.668047 1_2:+4085522 None:intergenic
ATGAAACAAAGAATGGGACC+AGG 0.673070 1_2:-4085540 Msa0050320:CDS
GTGGAAAATCTAGGTGACGA+TGG 0.673584 1_2:-4083866 Msa0050320:CDS
GTATTGTGTCGTTAACCTAG+TGG 0.677271 1_2:+4082414 None:intergenic
GTTGCTTTAGAGTCACGCCA+TGG 0.679288 1_2:-4083830 Msa0050320:CDS
GTGTCACATAGCTCTTGCTG+AGG 0.682419 1_2:+4084289 None:intergenic
TTGAACTTGAGCAACATATG+GGG 0.689568 1_2:+4081496 None:intergenic
TTTGAGGGACATGCTTGACG+GGG 0.689897 1_2:-4081471 Msa0050320:CDS
CCGGGTGAAAGAGTGGTAGG+TGG 0.693784 1_2:+4083956 None:intergenic
GTGTTATGCATGATACTATG+GGG 0.698502 1_2:-4080627 Msa0050320:three_prime_UTR
CCGGTCTTGCCTGTACCGGG+AGG 0.700623 1_2:+4083066 None:intergenic
TAGAGAAAGTAGGATCACCA+TGG 0.723561 1_2:+4083813 None:intergenic
GTGAGAACATGTGACAGCAA+GGG 0.734905 1_2:-4083920 Msa0050320:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATATTTTTATTTTTTT+GGG - chr1_2:4085880-4085899 Msa0050320:CDS 0.0%
!!! TAGTTTTTGATATTTATATA+AGG - chr1_2:4081837-4081856 Msa0050320:CDS 10.0%
!!! AGTTTTTGATATTTATATAA+GGG - chr1_2:4081838-4081857 Msa0050320:CDS 10.0%
!! TTTCAAATTAAAATAGAATT+TGG + chr1_2:4081969-4081988 None:intergenic 10.0%
!!! TTATATTTTTATTTTTTTGG+GGG - chr1_2:4085882-4085901 Msa0050320:CDS 10.0%
!!! TTTTAGATTTTTTTTGTTCA+TGG + chr1_2:4080644-4080663 None:intergenic 15.0%
!! TAAAAATATTCATCATTGTT+TGG - chr1_2:4085481-4085500 Msa0050320:CDS 15.0%
!!! TATATTTTTATTTTTTTGGG+GGG - chr1_2:4085883-4085902 Msa0050320:CDS 15.0%
!! TTCCAAAAAAAATTCAGTAA+TGG - chr1_2:4080727-4080746 Msa0050320:three_prime_UTR 20.0%
!!! TTCCATTACTGAATTTTTTT+TGG + chr1_2:4080732-4080751 None:intergenic 20.0%
!! ATAATCTCTAATAAGCTAAT+AGG + chr1_2:4081436-4081455 None:intergenic 20.0%
!! CTTATCTATTTATCTAAACA+TGG - chr1_2:4081626-4081645 Msa0050320:intron 20.0%
!! AAACAACATGAATAAGATTA+AGG - chr1_2:4081725-4081744 Msa0050320:CDS 20.0%
!! ACATGAAATACTTAAAGAAA+CGG - chr1_2:4081891-4081910 Msa0050320:intron 20.0%
!!! CATTTATGAACTTTTTAAAC+AGG - chr1_2:4082678-4082697 Msa0050320:CDS 20.0%
!!! TTATGTAAGTTGAAATTAAG+AGG - chr1_2:4083071-4083090 Msa0050320:CDS 20.0%
!! AAACTAAATTTATGCCAAAT+AGG + chr1_2:4083184-4083203 None:intergenic 20.0%
!! GAAAAATAATTAGCTCATAT+GGG + chr1_2:4083207-4083226 None:intergenic 20.0%
!! AGAAAAATAATTAGCTCATA+TGG + chr1_2:4083208-4083227 None:intergenic 20.0%
!! TCAAATAAATCAATCCTAAT+AGG - chr1_2:4084656-4084675 Msa0050320:intron 20.0%
!!! GCTTATTTTTATTACATGAA+TGG - chr1_2:4084808-4084827 Msa0050320:intron 20.0%
!!! GTTTCAACAAATTTTTTACT+TGG - chr1_2:4085372-4085391 Msa0050320:CDS 20.0%
!!! ACTTGGTGAAAAAAATAAAA+TGG - chr1_2:4085389-4085408 Msa0050320:CDS 20.0%
!! CTTGGTGAAAAAAATAAAAT+GGG - chr1_2:4085390-4085409 Msa0050320:CDS 20.0%
!! AACAAAGAAAATCAAGTATA+GGG + chr1_2:4085434-4085453 None:intergenic 20.0%
!! AAACAAAGAAAATCAAGTAT+AGG + chr1_2:4085435-4085454 None:intergenic 20.0%
!!! TAGATTTTTTTTGTTCATGG+AGG + chr1_2:4080641-4080660 None:intergenic 25.0%
!!! CAGTTTTTGTTATTCAATAG+TGG + chr1_2:4080689-4080708 None:intergenic 25.0%
! TTCTTGTTCATATTCTCAAA+GGG + chr1_2:4081004-4081023 None:intergenic 25.0%
! ATTCTTGTTCATATTCTCAA+AGG + chr1_2:4081005-4081024 None:intergenic 25.0%
!!! TTCTGAAATGAAACAAAGAA+TGG - chr1_2:4081162-4081181 Msa0050320:intron 25.0%
!! TCTGAAATGAAACAAAGAAT+GGG - chr1_2:4081163-4081182 Msa0050320:intron 25.0%
! TGAAAATGATCAAAAAGAGT+AGG + chr1_2:4081289-4081308 None:intergenic 25.0%
! AATCACTTGTAAGATTGTTT+AGG - chr1_2:4081466-4081485 Msa0050320:CDS 25.0%
! TTAAGGACTAATGATATGTT+TGG - chr1_2:4081742-4081761 Msa0050320:CDS 25.0%
!!! GAGGTTATTTTGAGTTTATT+TGG - chr1_2:4081767-4081786 Msa0050320:CDS 25.0%
!! TTAGTTCTTGTGTATTTCTT+TGG - chr1_2:4081800-4081819 Msa0050320:CDS 25.0%
! TATTTATATAAGGGTCTTCA+AGG - chr1_2:4081847-4081866 Msa0050320:CDS 25.0%
! AGAACTTCTCAATATTGAAA+GGG - chr1_2:4082293-4082312 Msa0050320:intron 25.0%
! GATGGCATTTAAATTACAAA+TGG + chr1_2:4082445-4082464 None:intergenic 25.0%
! TAATTATAAATGTGATCCAG+TGG - chr1_2:4082501-4082520 Msa0050320:CDS 25.0%
! AAGTTCATAAATGATCATAG+AGG + chr1_2:4082671-4082690 None:intergenic 25.0%
!! ATGAACTTTTTAAACAGGAT+TGG - chr1_2:4082683-4082702 Msa0050320:CDS 25.0%
!! TGAACTTTTTAAACAGGATT+GGG - chr1_2:4082684-4082703 Msa0050320:CDS 25.0%
!! ATTACAGCAACAAAATGTTT+TGG + chr1_2:4083023-4083042 None:intergenic 25.0%
! AATAGGTGAAGTTATATTGA+TGG + chr1_2:4083167-4083186 None:intergenic 25.0%
! TCAATATAACTTCACCTATT+TGG - chr1_2:4083167-4083186 Msa0050320:CDS 25.0%
! ATACGAACATGAATCTTATT+TGG + chr1_2:4083335-4083354 None:intergenic 25.0%
!! GAAAAAACAAATGGAGTATT+AGG - chr1_2:4083538-4083557 Msa0050320:intron 25.0%
! TATTATTTGCTTGAGTAAAC+CGG + chr1_2:4083665-4083684 None:intergenic 25.0%
! GAGTTTAATACCTTAACAAA+AGG + chr1_2:4084420-4084439 None:intergenic 25.0%
! TTTAGAGATGTAACTCAAAA+TGG - chr1_2:4084700-4084719 Msa0050320:intron 25.0%
!! CAAAAAGTACATGTAGTATA+TGG + chr1_2:4084784-4084803 None:intergenic 25.0%
!! GTATTTTCCTTAATTTATGC+TGG - chr1_2:4085004-4085023 Msa0050320:intron 25.0%
! ATCATTACCAGCATAAATTA+AGG + chr1_2:4085014-4085033 None:intergenic 25.0%
! TTCTTGGATCAAAGAATAAA+AGG + chr1_2:4085084-4085103 None:intergenic 25.0%
!! TGATGCTGTAATTTTATCAA+TGG - chr1_2:4085319-4085338 Msa0050320:CDS 25.0%
!!! TAAAAAATTTGTTGAAACCG+TGG + chr1_2:4085370-4085389 None:intergenic 25.0%
! ATACTCATGCATGAAAATTA+TGG - chr1_2:4085980-4085999 Msa0050320:exon 25.0%
AGTGGTTAAGTATATAAGCA+TGG + chr1_2:4080671-4080690 None:intergenic 30.0%
!! AAGCTAGTTTGGATTTTGAT+GGG + chr1_2:4080787-4080806 None:intergenic 30.0%
!! TTGTGATGTTTTGAACTACA+CGG + chr1_2:4080895-4080914 None:intergenic 30.0%
ATAGGAACAGCATTCAAATA+AGG + chr1_2:4081220-4081239 None:intergenic 30.0%
GAGAAAGAAAAAACCTGAAT+TGG + chr1_2:4081407-4081426 None:intergenic 30.0%
ACTAATGATATGTTTGGAAG+AGG - chr1_2:4081748-4081767 Msa0050320:CDS 30.0%
! GGTTTGAAATTGATTGAAGA+GGG + chr1_2:4081948-4081967 None:intergenic 30.0%
! TGGTTTGAAATTGATTGAAG+AGG + chr1_2:4081949-4081968 None:intergenic 30.0%
!! CGCACATCTTATATTTTTGT+TGG + chr1_2:4082075-4082094 None:intergenic 30.0%
CAGAACTTCTCAATATTGAA+AGG - chr1_2:4082292-4082311 Msa0050320:intron 30.0%
TATTGAAAGGGATGTTGAAT+TGG - chr1_2:4082305-4082324 Msa0050320:CDS 30.0%
ATTAGAACATATACATCCAC+TGG + chr1_2:4082520-4082539 None:intergenic 30.0%
!!! CCTTTTAAGTTACACACAAT+TGG + chr1_2:4082648-4082667 None:intergenic 30.0%
CCAATTGTGTGTAACTTAAA+AGG - chr1_2:4082645-4082664 Msa0050320:CDS 30.0%
CCAAATAGTTTAGAGAAAGT+AGG + chr1_2:4082909-4082928 None:intergenic 30.0%
CCTACTTTCTCTAAACTATT+TGG - chr1_2:4082906-4082925 Msa0050320:CDS 30.0%
CTTATTTGAACTGCAATACA+TGG + chr1_2:4083260-4083279 None:intergenic 30.0%
!!! ATTTTTCTGAAGCAGCATTA+GGG + chr1_2:4083413-4083432 None:intergenic 30.0%
AGAAGAATAGTTTGGTAGAT+TGG - chr1_2:4083509-4083528 Msa0050320:intron 30.0%
GAAGAATAGTTTGGTAGATT+GGG - chr1_2:4083510-4083529 Msa0050320:intron 30.0%
TGGGAAGAAGAAAAAACAAA+TGG - chr1_2:4083529-4083548 Msa0050320:intron 30.0%
GTTGAAAAGCTTTCAAATGT+TGG - chr1_2:4083754-4083773 Msa0050320:CDS 30.0%
GGAATAAATATTGTTCGAGT+TGG - chr1_2:4083775-4083794 Msa0050320:CDS 30.0%
!!! TACTGTTTTTGATATACGAG+CGG + chr1_2:4083806-4083825 None:intergenic 30.0%
! AAGATCTAAGACAATGTTTG+AGG - chr1_2:4083911-4083930 Msa0050320:CDS 30.0%
! AGATCTAAGACAATGTTTGA+GGG - chr1_2:4083912-4083931 Msa0050320:CDS 30.0%
!! AAAGCTAAATGCTTTTGACT+TGG - chr1_2:4084083-4084102 Msa0050320:intron 30.0%
!! TCCTGTGATATTTTCTAGAA+AGG - chr1_2:4084206-4084225 Msa0050320:intron 30.0%
!!! TTTTCTAGAAAGGCATTAGA+AGG - chr1_2:4084216-4084235 Msa0050320:intron 30.0%
AGAGAATGGAGATATCAATT+AGG + chr1_2:4084442-4084461 None:intergenic 30.0%
AGACTATTTAGGAGAACTTA+CGG + chr1_2:4084609-4084628 None:intergenic 30.0%
! ATGCGAAAATCTCTTTTTCT+TGG + chr1_2:4085100-4085119 None:intergenic 30.0%
CAGAAAACAGAAATGTCAAA+TGG + chr1_2:4085124-4085143 None:intergenic 30.0%
CCTGAATTTCAGATTCAAAT+TGG + chr1_2:4085164-4085183 None:intergenic 30.0%
! CCAATTTGAATCTGAAATTC+AGG - chr1_2:4085161-4085180 Msa0050320:intron 30.0%
ACTGAACTACAATAGCATTT+GGG + chr1_2:4085193-4085212 None:intergenic 30.0%
!! TCCACAATTGATAGTTTTCA+AGG - chr1_2:4085287-4085306 Msa0050320:intron 30.0%
ACCTTGAAAACTATCAATTG+TGG + chr1_2:4085291-4085310 None:intergenic 30.0%
!! CAATTGATAGTTTTCAAGGT+CGG - chr1_2:4085291-4085310 Msa0050320:intron 30.0%
!! AATTGATAGTTTTCAAGGTC+GGG - chr1_2:4085292-4085311 Msa0050320:intron 30.0%
TGCTAGTGAACTAACATAAT+TGG - chr1_2:4085507-4085526 Msa0050320:CDS 30.0%
TAATCCATAGAAGGTAACAT+TGG + chr1_2:4085795-4085814 None:intergenic 30.0%
GCATTTCTAAATGTGTTTCA+AGG + chr1_2:4085838-4085857 None:intergenic 30.0%
GTCTCATGTTACAATTATTG+TGG + chr1_2:4086016-4086035 None:intergenic 30.0%
AAGTGTTATGCATGATACTA+TGG - chr1_2:4086080-4086099 Msa0050320:five_prime_UTR 30.0%
AGTGTTATGCATGATACTAT+GGG - chr1_2:4086081-4086100 Msa0050320:five_prime_UTR 30.0%
ATGGGGTAAAAATTGTTTGA+TGG - chr1_2:4086099-4086118 Msa0050320:five_prime_UTR 30.0%
!! GAAGCTAGTTTGGATTTTGA+TGG + chr1_2:4080788-4080807 None:intergenic 35.0%
TGAAGATGATGAAGCTAGTT+TGG + chr1_2:4080798-4080817 None:intergenic 35.0%
CTAGCTTCATCATCTTCATT+TGG - chr1_2:4080800-4080819 Msa0050320:three_prime_UTR 35.0%
CACAAACAGCAATGAAACAA+AGG - chr1_2:4080910-4080929 Msa0050320:exon 35.0%
! TCTCCTTCTTCTTCTTTTTG+TGG + chr1_2:4080945-4080964 None:intergenic 35.0%
CAACATCTTTCCATCCAATA+GGG + chr1_2:4081054-4081073 None:intergenic 35.0%
GAAAGATGTTGGAAAAAGTG+TGG - chr1_2:4081063-4081082 Msa0050320:CDS 35.0%
! ACGTGAGAGTATGAAATCTA+TGG - chr1_2:4081096-4081115 Msa0050320:CDS 35.0%
TGCTGAGTTACTTGAAGATT+TGG - chr1_2:4081135-4081154 Msa0050320:CDS 35.0%
TGAATAACAAACGTAAGACC+TGG + chr1_2:4081190-4081209 None:intergenic 35.0%
CTTCAAGATATGCAGAGTAA+AGG - chr1_2:4081328-4081347 Msa0050320:intron 35.0%
AGATATGCAGAGTAAAGGTT+TGG - chr1_2:4081333-4081352 Msa0050320:intron 35.0%
! GTAAAGGTTTGGTTGAAGAT+TGG - chr1_2:4081344-4081363 Msa0050320:intron 35.0%
TTAAAGAAACGGTTTATCCG+AGG - chr1_2:4081902-4081921 Msa0050320:intron 35.0%
ACTGATAGGTTAATACACCT+CGG + chr1_2:4081922-4081941 None:intergenic 35.0%
!! TTTTAGGAATGGACAGAGAA+AGG - chr1_2:4082223-4082242 Msa0050320:intron 35.0%
TTTAGGAATGGACAGAGAAA+GGG - chr1_2:4082224-4082243 Msa0050320:intron 35.0%
!! GAGAAGTTCTGACATGTTTT+GGG + chr1_2:4082283-4082302 None:intergenic 35.0%
!! TGAGAAGTTCTGACATGTTT+TGG + chr1_2:4082284-4082303 None:intergenic 35.0%
TGTTGAATTGGAGTTTACTC+AGG - chr1_2:4082317-4082336 Msa0050320:CDS 35.0%
GTAAAAGAGAATACCTGTAG+AGG + chr1_2:4082472-4082491 None:intergenic 35.0%
! ACTTTTTAAACAGGATTGGG+AGG - chr1_2:4082687-4082706 Msa0050320:CDS 35.0%
!! CTGGTGTTATTCAAGATTGA+AGG - chr1_2:4082717-4082736 Msa0050320:CDS 35.0%
CATTGATCGTATTCAAGGAT+TGG - chr1_2:4082941-4082960 Msa0050320:CDS 35.0%
GATAGAAATCAGTACCTCAT+AGG + chr1_2:4082979-4082998 None:intergenic 35.0%
! AGGTTTTCTCTAGTCAAATG+AGG - chr1_2:4083091-4083110 Msa0050320:CDS 35.0%
! GGTTTTCTCTAGTCAAATGA+GGG - chr1_2:4083092-4083111 Msa0050320:CDS 35.0%
ACGATAATGATGAACAGAAG+CGG + chr1_2:4083130-4083149 None:intergenic 35.0%
!!! CATTTTTCTGAAGCAGCATT+AGG + chr1_2:4083414-4083433 None:intergenic 35.0%
! CTAATGCTGCTTCAGAAAAA+TGG - chr1_2:4083412-4083431 Msa0050320:intron 35.0%
GTTGCAACAACAGAAATTGA+TGG + chr1_2:4083454-4083473 None:intergenic 35.0%
TCTGTTGTTGCAACTCTATT+CGG - chr1_2:4083460-4083479 Msa0050320:intron 35.0%
ATGGCTTGAGAAGAATAGTT+TGG - chr1_2:4083501-4083520 Msa0050320:intron 35.0%
TCTCTGCTGAGATTTATCAA+AGG + chr1_2:4083572-4083591 None:intergenic 35.0%
CGTTAGGTTTGAATAAGAAG+AGG - chr1_2:4083599-4083618 Msa0050320:intron 35.0%
CATATTATCAACAGCTGCAT+TGG + chr1_2:4083734-4083753 None:intergenic 35.0%
!! CAATGCAGCTGTTGATAATA+TGG - chr1_2:4083732-4083751 Msa0050320:intron 35.0%
!!! ACTGTTTTTGATATACGAGC+GGG + chr1_2:4083805-4083824 None:intergenic 35.0%
CGCATTTACAATTTCTCCTA+AGG + chr1_2:4083839-4083858 None:intergenic 35.0%
AGAGGAAGAAATCTGATCTA+AGG - chr1_2:4083887-4083906 Msa0050320:CDS 35.0%
!! GCATTTAGCTTTCGAATCAT+GGG + chr1_2:4084075-4084094 None:intergenic 35.0%
!! AGCATTTAGCTTTCGAATCA+TGG + chr1_2:4084076-4084095 None:intergenic 35.0%
AATATAGGAATCCAGCAAGA+CGG + chr1_2:4084141-4084160 None:intergenic 35.0%
AAAATATCACAGGAGCTAGT+TGG + chr1_2:4084200-4084219 None:intergenic 35.0%
! GCCTTTCTAGAAAATATCAC+AGG + chr1_2:4084210-4084229 None:intergenic 35.0%
TTGCAATGGCATCATTCATA+CGG + chr1_2:4084320-4084339 None:intergenic 35.0%
AAGATGAGAAAAGACAGTCT+TGG + chr1_2:4084385-4084404 None:intergenic 35.0%
! TGTAGACTCTCCTTTTGTTA+AGG - chr1_2:4084407-4084426 Msa0050320:CDS 35.0%
! AAGGCTGCTATTTACATCTT+GGG - chr1_2:4084472-4084491 Msa0050320:CDS 35.0%
TTAAGCTGCTTATCCAAACA+AGG + chr1_2:4084498-4084517 None:intergenic 35.0%
AAACTCCTATAGTTAGAGCA+AGG + chr1_2:4084683-4084702 None:intergenic 35.0%
CCAATTGAAAGACTTCCATA+CGG + chr1_2:4084908-4084927 None:intergenic 35.0%
GACTGAACTACAATAGCATT+TGG + chr1_2:4085194-4085213 None:intergenic 35.0%
TTGAACTTGAGCAACATATG+GGG + chr1_2:4085216-4085235 None:intergenic 35.0%
GTTGAACTTGAGCAACATAT+GGG + chr1_2:4085217-4085236 None:intergenic 35.0%
AGTTGAACTTGAGCAACATA+TGG + chr1_2:4085218-4085237 None:intergenic 35.0%
! TTGCTCAAGTTCAACTTTTG+AGG - chr1_2:4085222-4085241 Msa0050320:intron 35.0%
! TGCTCAAGTTCAACTTTTGA+GGG - chr1_2:4085223-4085242 Msa0050320:intron 35.0%
AATTGTGGAAACTTCAGTAC+CGG + chr1_2:4085276-4085295 None:intergenic 35.0%
! CTTTGTTTCATAAGTGTTGC+TGG - chr1_2:4085447-4085466 Msa0050320:CDS 35.0%
ATAGGTACGATCAAACACAT+TGG - chr1_2:4085566-4085585 Msa0050320:CDS 35.0%
GAATCCAATGTTACCTTCTA+TGG - chr1_2:4085788-4085807 Msa0050320:CDS 35.0%
TTGCAACACTAATCCATAGA+AGG + chr1_2:4085804-4085823 None:intergenic 35.0%
TGCCTATAAGCAATTGTTTG+AGG - chr1_2:4085855-4085874 Msa0050320:CDS 35.0%
GCCTATAAGCAATTGTTTGA+GGG - chr1_2:4085856-4085875 Msa0050320:CDS 35.0%
CCTATAAGCAATTGTTTGAG+GGG - chr1_2:4085857-4085876 Msa0050320:CDS 35.0%
ATGCATAACACTTGCATCTA+TGG + chr1_2:4086073-4086092 None:intergenic 35.0%
GTGTTATGCATGATACTATG+GGG - chr1_2:4086082-4086101 Msa0050320:five_prime_UTR 35.0%
GAGGATGTTGTTGACAAAGA+AGG + chr1_2:4080622-4080641 None:intergenic 40.0%
! ACATCAACTTGCTTCTTCTG+TGG - chr1_2:4080755-4080774 Msa0050320:three_prime_UTR 40.0%
! CTTCTTCTTTTTGTGGTGCT+TGG + chr1_2:4080938-4080957 None:intergenic 40.0%
GCACCACAAAAAGAAGAAGA+AGG - chr1_2:4080939-4080958 Msa0050320:CDS 40.0%
CTTCACGTGCATGAGAATAT+AGG - chr1_2:4081025-4081044 Msa0050320:CDS 40.0%
GAGAATATAGGTGACCCTAT+TGG - chr1_2:4081037-4081056 Msa0050320:CDS 40.0%
ATATAGGTGACCCTATTGGA+TGG - chr1_2:4081041-4081060 Msa0050320:CDS 40.0%
CCAACATCTTTCCATCCAAT+AGG + chr1_2:4081055-4081074 None:intergenic 40.0%
CCTATTGGATGGAAAGATGT+TGG - chr1_2:4081052-4081071 Msa0050320:CDS 40.0%
! TTGGAAAAAGTGTGGTGAGT+TGG - chr1_2:4081071-4081090 Msa0050320:CDS 40.0%
ATGAAACAAAGAATGGGACC+AGG - chr1_2:4081169-4081188 Msa0050320:intron 40.0%
CAAGTAACTTCAAGACCAAG+TGG + chr1_2:4081244-4081263 None:intergenic 40.0%
TCAGTCTTGGAAGTTGCTTA+AGG - chr1_2:4081375-4081394 Msa0050320:intron 40.0%
ATTGAAGAGGGCAAACTGAT+AGG + chr1_2:4081936-4081955 None:intergenic 40.0%
CAACGCGATAAGATTGAGAA+TGG - chr1_2:4082135-4082154 Msa0050320:intron 40.0%
AAAACTCCTTGGACACTCTT+AGG + chr1_2:4082207-4082226 None:intergenic 40.0%
!!! AAGAGTGTCCAAGGAGTTTT+AGG - chr1_2:4082207-4082226 Msa0050320:intron 40.0%
!!! TGTCCAAGGAGTTTTAGGAA+TGG - chr1_2:4082212-4082231 Msa0050320:intron 40.0%
TGTCCATTCCTAAAACTCCT+TGG + chr1_2:4082218-4082237 None:intergenic 40.0%
TGAATTGGAGTTTACTCAGG+AGG - chr1_2:4082320-4082339 Msa0050320:CDS 40.0%
!! TCGGAAGCATCATCTTGTTT+AGG + chr1_2:4082360-4082379 None:intergenic 40.0%
! AAGAACTCAATCGGTTTCGA+CGG + chr1_2:4082384-4082403 None:intergenic 40.0%
TGGCTAACCAAGAACTCAAT+CGG + chr1_2:4082393-4082412 None:intergenic 40.0%
!! AATACCTGTAGAGGTACTGA+TGG + chr1_2:4082463-4082482 None:intergenic 40.0%
TCTCACACAAACCATTTCTC+CGG + chr1_2:4082775-4082794 None:intergenic 40.0%
GTTACAACTTCTTGCATGCA+AGG - chr1_2:4082816-4082835 Msa0050320:CDS 40.0%
CAAGGAGTTGTGGAAAATCT+AGG - chr1_2:4082834-4082853 Msa0050320:CDS 40.0%
TAGAGAAAGTAGGATCACCA+TGG + chr1_2:4082899-4082918 None:intergenic 40.0%
GAATAAGAAGAGGCCACTAT+TGG - chr1_2:4083609-4083628 Msa0050320:intron 40.0%
! TTATCAACAGCTGCATTGGT+AGG + chr1_2:4083730-4083749 None:intergenic 40.0%
ACAGTAGCATCAAAGTCCTT+AGG - chr1_2:4083820-4083839 Msa0050320:CDS 40.0%
TTCCCAACTGTTTCAGAAGT+TGG + chr1_2:4083963-4083982 None:intergenic 40.0%
GGGAAAGTCGCTAAAGAAAA+AGG - chr1_2:4083978-4083997 Msa0050320:CDS 40.0%
TGAAGTTCTATCTAGTGCTC+AGG - chr1_2:4084017-4084036 Msa0050320:intron 40.0%
TAGCTTTCGAATCATGGGAT+CGG + chr1_2:4084070-4084089 None:intergenic 40.0%
TTGGTTGTCATAGATGAAGC+TGG - chr1_2:4084102-4084121 Msa0050320:intron 40.0%
TTGCTGGATTCCTATATTGC+AGG - chr1_2:4084143-4084162 Msa0050320:intron 40.0%
!! TCTAGAAAGGCATTAGAAGG+TGG - chr1_2:4084219-4084238 Msa0050320:intron 40.0%
! AAGGCATTAGAAGGTGGTTT+AGG - chr1_2:4084225-4084244 Msa0050320:intron 40.0%
! GTATTGTGTCGTTAACCTAG+TGG + chr1_2:4084298-4084317 None:intergenic 40.0%
TGAATGATGCCATTGCAAGT+TGG - chr1_2:4084322-4084341 Msa0050320:CDS 40.0%
GAATGATGCCATTGCAAGTT+GGG - chr1_2:4084323-4084342 Msa0050320:CDS 40.0%
ATGAGAAAAGACAGTCTTGG+AGG + chr1_2:4084382-4084401 None:intergenic 40.0%
CCTTCACTTCACAAAGAGAA+TGG + chr1_2:4084456-4084475 None:intergenic 40.0%
CCATTCTCTTTGTGAAGTGA+AGG - chr1_2:4084453-4084472 Msa0050320:CDS 40.0%
! GAAGGCTGCTATTTACATCT+TGG - chr1_2:4084471-4084490 Msa0050320:CDS 40.0%
!! TTTACATCTTGGGCCTTGTT+TGG - chr1_2:4084482-4084501 Msa0050320:CDS 40.0%
GTTCTCCTAAATAGTCTCAC+AGG - chr1_2:4084612-4084631 Msa0050320:intron 40.0%
AAGCACCTGTGAGACTATTT+AGG + chr1_2:4084620-4084639 None:intergenic 40.0%
AGTTAGAGCAAGGACCTATT+AGG + chr1_2:4084673-4084692 None:intergenic 40.0%
TAGGTCCTTGCTCTAACTAT+AGG - chr1_2:4084675-4084694 Msa0050320:intron 40.0%
CCGTATGGAAGTCTTTCAAT+TGG - chr1_2:4084905-4084924 Msa0050320:intron 40.0%
ACAGGCTCGTTGTATAATGA+AGG - chr1_2:4084956-4084975 Msa0050320:intron 40.0%
GAATCCAAACTCTACAACCA+CGG - chr1_2:4085350-4085369 Msa0050320:CDS 40.0%
CCATATTCGACACTTTGGTA+GGG - chr1_2:4085716-4085735 Msa0050320:CDS 40.0%
! CACGTAGAACCAGATAGTTT+TGG - chr1_2:4085744-4085763 Msa0050320:CDS 40.0%
!!! GTAGAACCAGATAGTTTTGG+AGG - chr1_2:4085747-4085766 Msa0050320:CDS 40.0%
!!! AACCAGATAGTTTTGGAGGA+GGG - chr1_2:4085751-4085770 Msa0050320:CDS 40.0%
CCCCTCAAACAATTGCTTAT+AGG + chr1_2:4085860-4085879 None:intergenic 40.0%
!! TTTGGGGGGTATTCATAAAC+TGG - chr1_2:4085897-4085916 Msa0050320:CDS 40.0%
AATGCTGTTCCTATGCCACT+TGG - chr1_2:4081226-4081245 Msa0050320:intron 45.0%
ACTTCAAGACCAAGTGGCAT+AGG + chr1_2:4081238-4081257 None:intergenic 45.0%
ATTGGCGTCAAACTCAGTCT+TGG - chr1_2:4081362-4081381 Msa0050320:intron 45.0%
CTTAAGGAGCTTGCCAATTC+AGG - chr1_2:4081391-4081410 Msa0050320:CDS 45.0%
TTCAATTGCAGCTCAGCACA+GGG - chr1_2:4082158-4082177 Msa0050320:intron 45.0%
! GGGTCAAAGTGTTACAGCAA+AGG - chr1_2:4082244-4082263 Msa0050320:intron 45.0%
GTCGAAACCGATTGAGTTCT+TGG - chr1_2:4082383-4082402 Msa0050320:CDS 45.0%
AATGCCATCAGTACCTCTAC+AGG - chr1_2:4082456-4082475 Msa0050320:CDS 45.0%
AAAGAGTGGTAGGTGGCAAT+CGG + chr1_2:4082749-4082768 None:intergenic 45.0%
CTCACACAAACCATTTCTCC+GGG + chr1_2:4082774-4082793 None:intergenic 45.0%
TGTGAGAACATGTGACAGCA+AGG - chr1_2:4082788-4082807 Msa0050320:CDS 45.0%
GTGAGAACATGTGACAGCAA+GGG - chr1_2:4082789-4082808 Msa0050320:CDS 45.0%
TTCTTGCATGCAAGGAGTTG+TGG - chr1_2:4082824-4082843 Msa0050320:CDS 45.0%
GTGGAAAATCTAGGTGACGA+TGG - chr1_2:4082843-4082862 Msa0050320:CDS 45.0%
!! ATGGCGTGACTCTAAAGCAA+CGG + chr1_2:4082880-4082899 None:intergenic 45.0%
! GTGCGCATTGATCGTATTCA+AGG - chr1_2:4082936-4082955 Msa0050320:CDS 45.0%
GGCTGATACACTTACCTATG+AGG - chr1_2:4082962-4082981 Msa0050320:CDS 45.0%
ATGATGAACAGAAGCGGCAA+GGG + chr1_2:4083124-4083143 None:intergenic 45.0%
AATGATGAACAGAAGCGGCA+AGG + chr1_2:4083125-4083144 None:intergenic 45.0%
TTGCAACTCTATTCGGCGAA+GGG - chr1_2:4083467-4083486 Msa0050320:intron 45.0%
! AGGCCACTATTGGTTATCCA+AGG - chr1_2:4083619-4083638 Msa0050320:intron 45.0%
GGTCCTTGGATAACCAATAG+TGG + chr1_2:4083625-4083644 None:intergenic 45.0%
GCAAATAATAACATGCGCCG+TGG - chr1_2:4083675-4083694 Msa0050320:intron 45.0%
AACCCTTTCACCTTGTTCCA+CGG + chr1_2:4083695-4083714 None:intergenic 45.0%
AGGGATGATTCATTAGCTGC+AGG - chr1_2:4083931-4083950 Msa0050320:CDS 45.0%
!! ACGCCAACTTCTGAAACAGT+TGG - chr1_2:4083957-4083976 Msa0050320:CDS 45.0%
!! CGCCAACTTCTGAAACAGTT+GGG - chr1_2:4083958-4083977 Msa0050320:CDS 45.0%
TGTCATAGATGAAGCTGGAC+AGG - chr1_2:4084107-4084126 Msa0050320:intron 45.0%
CATCGTTTCGCCTGCAATAT+AGG + chr1_2:4084156-4084175 None:intergenic 45.0%
GCGAAACGATGCATTCTTGT+TGG - chr1_2:4084165-4084184 Msa0050320:intron 45.0%
ATGAAGGGATTCTCACCACT+AGG - chr1_2:4084280-4084299 Msa0050320:CDS 45.0%
TGTAGGCTGCAACAACATCA+AGG + chr1_2:4084843-4084862 None:intergenic 45.0%
TGATGTTGTTGCAGCCTACA+TGG - chr1_2:4084843-4084862 Msa0050320:intron 45.0%
GGACACTGTGTTATCCATGT+AGG + chr1_2:4084860-4084879 None:intergenic 45.0%
CGAGTGTCAAGAAGTAGTAG+AGG + chr1_2:4084881-4084900 None:intergenic 45.0%
!! TTGCGAAGAGCATCTAGATC+AGG - chr1_2:4084928-4084947 Msa0050320:intron 45.0%
!! CTTTTGAGGGACATGCTTGA+CGG - chr1_2:4085236-4085255 Msa0050320:intron 45.0%
!! TTTTGAGGGACATGCTTGAC+GGG - chr1_2:4085237-4085256 Msa0050320:intron 45.0%
GAAACCGTGGTTGTAGAGTT+TGG + chr1_2:4085357-4085376 None:intergenic 45.0%
TGATTCTTCTGCTATCGCCA+AGG + chr1_2:4085605-4085624 None:intergenic 45.0%
TATGGCGCATAAGTCTTGCT+AGG + chr1_2:4085701-4085720 None:intergenic 45.0%
ATGCGCCATATTCGACACTT+TGG - chr1_2:4085711-4085730 Msa0050320:CDS 45.0%
GCCATATTCGACACTTTGGT+AGG - chr1_2:4085715-4085734 Msa0050320:CDS 45.0%
!! CCCTACCAAAGTGTCGAATA+TGG + chr1_2:4085719-4085738 None:intergenic 45.0%
!!! GAACCAGATAGTTTTGGAGG+AGG - chr1_2:4085750-4085769 Msa0050320:CDS 45.0%
AACCCTCCTCCAAAACTATC+TGG + chr1_2:4085756-4085775 None:intergenic 45.0%
!!! GATAGTTTTGGAGGAGGGTT+TGG - chr1_2:4085756-4085775 Msa0050320:CDS 45.0%
!! TTCAAAAAATATAATAAAAT+AGG - chr1_2:4085548-4085567 Msa0050320:CDS 5.0%
!!! GATTTATATTTTTATTTTTT+TGG - chr1_2:4085879-4085898 Msa0050320:CDS 5.0%
!!! TTTATATTTTTATTTTTTTG+GGG - chr1_2:4085881-4085900 Msa0050320:CDS 5.0%
GTTCAATTGCAGCTCAGCAC+AGG - chr1_2:4082157-4082176 Msa0050320:intron 50.0%
!! ACACAGCCTAAGAGTGTCCA+AGG - chr1_2:4082198-4082217 Msa0050320:intron 50.0%
! CTCAATCGGTTTCGACGGAT+CGG + chr1_2:4082379-4082398 None:intergenic 50.0%
GTGTCACATAGCTCTTGCTG+AGG + chr1_2:4082423-4082442 None:intergenic 50.0%
AGGATTGGGAGGAATGCATC+TGG - chr1_2:4082698-4082717 Msa0050320:CDS 50.0%
CATTTCTCCGGGTGAAAGAG+TGG + chr1_2:4082763-4082782 None:intergenic 50.0%
CACTCTTTCACCCGGAGAAA+TGG - chr1_2:4082761-4082780 Msa0050320:CDS 50.0%
!! GTTGCTTTAGAGTCACGCCA+TGG - chr1_2:4082879-4082898 Msa0050320:CDS 50.0%
GTTGCAACTCTATTCGGCGA+AGG - chr1_2:4083466-4083485 Msa0050320:intron 50.0%
TGCAACTCTATTCGGCGAAG+GGG - chr1_2:4083468-4083487 Msa0050320:intron 50.0%
CAGCAGAGAGCAATTGCGTT+AGG - chr1_2:4083583-4083602 Msa0050320:intron 50.0%
TTGGTTATCCAAGGACCTCC+CGG - chr1_2:4083628-4083647 Msa0050320:intron 50.0%
TAAACCGGTCTTGCCTGTAC+CGG + chr1_2:4083650-4083669 None:intergenic 50.0%
ATAACATGCGCCGTGGAACA+AGG - chr1_2:4083682-4083701 Msa0050320:intron 50.0%
!! GTTTTCGCGAAGAGTGTGAG+AGG - chr1_2:4083869-4083888 Msa0050320:CDS 50.0%
GTTGTGCTTGCCACCAATAC+CGG - chr1_2:4084039-4084058 Msa0050320:intron 50.0%
AGGCAATTGAACCGTCTTGC+TGG - chr1_2:4084127-4084146 Msa0050320:intron 50.0%
AGAGCTGCAACTCTGCATGA+AGG - chr1_2:4084264-4084283 Msa0050320:CDS 50.0%
GAGCTGCAACTCTGCATGAA+GGG - chr1_2:4084265-4084284 Msa0050320:CDS 50.0%
CTTCGAAGCCCAACTTGCAA+TGG + chr1_2:4084334-4084353 None:intergenic 50.0%
! CATTGCAAGTTGGGCTTCGA+AGG - chr1_2:4084332-4084351 Msa0050320:CDS 50.0%
TGGGCTTCGAAGGAGATGTA+TGG - chr1_2:4084342-4084361 Msa0050320:CDS 50.0%
GCTTCGAAGGAGATGTATGG+AGG - chr1_2:4084345-4084364 Msa0050320:CDS 50.0%
CTTGACACTCGAATGCCGTA+TGG - chr1_2:4084890-4084909 Msa0050320:intron 50.0%
!! GAAGAGCATCTAGATCAGGC+TGG - chr1_2:4084932-4084951 Msa0050320:intron 50.0%
CATCTAGATCAGGCTGGAAC+AGG - chr1_2:4084938-4084957 Msa0050320:intron 50.0%
TTTGAGGGACATGCTTGACG+GGG - chr1_2:4085238-4085257 Msa0050320:intron 50.0%
GTCTTGCTAGGAACGTGTTG+TGG + chr1_2:4085689-4085708 None:intergenic 50.0%
TTTGGAGGAGGGTTTGGACT+TGG - chr1_2:4085762-4085781 Msa0050320:CDS 50.0%
CACATAGCTCTTGCTGAGGC+TGG + chr1_2:4082419-4082438 None:intergenic 55.0%
CCACCTACCACTCTTTCACC+CGG - chr1_2:4082753-4082772 Msa0050320:CDS 55.0%
TCTCCGGGTGAAAGAGTGGT+AGG + chr1_2:4082759-4082778 None:intergenic 55.0%
TTAGGGCTTCACAGTTGCGC+TGG + chr1_2:4083396-4083415 None:intergenic 55.0%
AAACCGGTCTTGCCTGTACC+GGG + chr1_2:4083649-4083668 None:intergenic 55.0%
CGCCGTGGAACAAGGTGAAA+GGG - chr1_2:4083690-4083709 Msa0050320:intron 55.0%
AATCATGGGATCGGCTGCTC+CGG + chr1_2:4084061-4084080 None:intergenic 55.0%
!! ACTTCAGTACCGGCAGCTTC+AGG + chr1_2:4085266-4085285 None:intergenic 55.0%
ATGCTTGCGCGCTCTTGTGA+TGG + chr1_2:4085634-4085653 None:intergenic 55.0%
CTCAGCACAGGGCAGTTGCA+AGG - chr1_2:4082169-4082188 Msa0050320:intron 60.0%
! GCTCTTGCTGAGGCTGGCTA+TGG + chr1_2:4082413-4082432 None:intergenic 60.0%
GAGTGGTAGGTGGCAATCGG+TGG + chr1_2:4082746-4082765 None:intergenic 60.0%
CCGGGTGAAAGAGTGGTAGG+TGG + chr1_2:4082756-4082775 None:intergenic 60.0%
GCGAAGGGGAAGATGCTGCA+TGG - chr1_2:4083482-4083501 Msa0050320:intron 60.0%
ATCCAAGGACCTCCCGGTAC+AGG - chr1_2:4083634-4083653 Msa0050320:intron 60.0%
GCGCCGTGGAACAAGGTGAA+AGG - chr1_2:4083689-4083708 Msa0050320:intron 60.0%
! ATCGGCTGCTCCGGTATTGG+TGG + chr1_2:4084052-4084071 None:intergenic 60.0%
TGCCTGTACCGGGAGGTCCT+TGG + chr1_2:4083639-4083658 None:intergenic 65.0%
CCTCCCGGTACAGGCAAGAC+CGG - chr1_2:4083643-4083662 Msa0050320:intron 65.0%
GGGATCGGCTGCTCCGGTAT+TGG + chr1_2:4084055-4084074 None:intergenic 65.0%
GACGGGGTTCCTGAAGCTGC+CGG - chr1_2:4085254-4085273 Msa0050320:intron 65.0%
CCGGTCTTGCCTGTACCGGG+AGG + chr1_2:4083646-4083665 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 4080590 4086141 4080590 ID=Msa0050320;Name=Msa0050320
chr1_2 mRNA 4080590 4086141 4080590 ID=Msa0050320-mRNA-1;Parent=Msa0050320;Name=Msa0050320-mRNA-1;_AED=0.02;_eAED=0.02;_QI=156|1|1|1|1|1|7|326|954
chr1_2 exon 4080590 4081161 4080590 ID=Msa0050320-mRNA-1:exon:1024;Parent=Msa0050320-mRNA-1
chr1_2 exon 4081391 4081548 4081391 ID=Msa0050320-mRNA-1:exon:1023;Parent=Msa0050320-mRNA-1
chr1_2 exon 4081706 4081874 4081706 ID=Msa0050320-mRNA-1:exon:1022;Parent=Msa0050320-mRNA-1
chr1_2 exon 4082303 4083334 4082303 ID=Msa0050320-mRNA-1:exon:1021;Parent=Msa0050320-mRNA-1
chr1_2 exon 4083748 4084031 4083748 ID=Msa0050320-mRNA-1:exon:1020;Parent=Msa0050320-mRNA-1
chr1_2 exon 4084254 4084562 4084254 ID=Msa0050320-mRNA-1:exon:1019;Parent=Msa0050320-mRNA-1
chr1_2 exon 4085319 4086141 4085319 ID=Msa0050320-mRNA-1:exon:1018;Parent=Msa0050320-mRNA-1
chr1_2 five_prime_UTR 4085986 4086141 4085986 ID=Msa0050320-mRNA-1:five_prime_utr;Parent=Msa0050320-mRNA-1
chr1_2 CDS 4085319 4085985 4085319 ID=Msa0050320-mRNA-1:cds;Parent=Msa0050320-mRNA-1
chr1_2 CDS 4084254 4084562 4084254 ID=Msa0050320-mRNA-1:cds;Parent=Msa0050320-mRNA-1
chr1_2 CDS 4083748 4084031 4083748 ID=Msa0050320-mRNA-1:cds;Parent=Msa0050320-mRNA-1
chr1_2 CDS 4082303 4083334 4082303 ID=Msa0050320-mRNA-1:cds;Parent=Msa0050320-mRNA-1
chr1_2 CDS 4081706 4081874 4081706 ID=Msa0050320-mRNA-1:cds;Parent=Msa0050320-mRNA-1
chr1_2 CDS 4081391 4081548 4081391 ID=Msa0050320-mRNA-1:cds;Parent=Msa0050320-mRNA-1
chr1_2 CDS 4080916 4081161 4080916 ID=Msa0050320-mRNA-1:cds;Parent=Msa0050320-mRNA-1
chr1_2 three_prime_UTR 4080590 4080915 4080590 ID=Msa0050320-mRNA-1:three_prime_utr;Parent=Msa0050320-mRNA-1
Gene Sequence

>Msa0050320

ATGGAAGCAACATCAACTTGCTTCTTCTGTGGTAGAATCCCATCAAAATCCAAACTAGCTTCATCATCTTCATTTGGATCATTTTGTTTATTAACACGCAACAATATTACTACAATCATGTGCAAAACATCATTGAAAACACACAACCGTGTAGTTCAAAACATCACAAACAGCAATGAAACAAAGGCTCCAAGCACCACAAAAAGAAGAAGAAGGAGAAGAAAAAACGATGCAGCAGCAATAGAAATTCAACTACCCTTTGAGAATATGAACAAGAATCTTCACGTGCATGAGAATATAGGTGACCCTATTGGATGGAAAGATGTTGGAAAAAGTGTGGTGAGTTGGATACGTGAGAGTATGAAATCTATGGCTTTTGAGATTGCTTCTGCTGAGTTACTTGAAGATTTGGAGTTTTCTGAAATGAAACAAAGAATGGGACCAGGTCTTACGTTTGTTATTCAAGCACAACCTTATTTGAATGCTGTTCCTATGCCACTTGGTCTTGAAGTTACTTGTTTGAAAGCTTGTACTCATTATCCTACTCTTTTTGATCATTTTCAAAGAGAGTTGCGTGATGTTCTTCAAGATATGCAGAGTAAAGGTTTGGTTGAAGATTGGCGTCAAACTCAGTCTTGGAAGTTGCTTAAGGAGCTTGCCAATTCAGCTCAGCACAGGGCAGTTGCAAGGAATGTAACACAGCCTAAGAGTGTCCAAGGAGTTTTAGGAATGGACAGAGAAAGGGTCAAAGTGTTACAGCAAAGGATCGATGAATTCACCCAAAACATGTCAGAACTTCTCAATATTGAAAGGGATGTTGAATTGGAGTTTACTCAGGAGGAATTAGATGCTGTTCCTAAACAAGATGATGCTTCCGATCCGTCGAAACCGATTGAGTTCTTGGTTAGCCATAGCCAGCCTCAGCAAGAGCTATGTGACACCATTTGTAATTTAAATGCCATCAGTACCTCTACAGGATTGGGAGGAATGCATCTGGTGTTATTCAAGATTGAAGGAAACCACCGATTGCCACCTACCACTCTTTCACCCGGAGAAATGGTTTGTGTGAGAACATGTGACAGCAAGGGTGCAGTTACAACTTCTTGCATGCAAGGAGTTGTGGAAAATCTAGGTGACGATGGCTATAGCATTACCGTTGCTTTAGAGTCACGCCATGGTGATCCTACTTTCTCTAAACTATTTGGAAAGAATGTGCGCATTGATCGTATTCAAGGATTGGCTGATACACTTACCTATGAGCGCAACTGTGAAGCCCTAATGCTGCTTCAGAAAAATGGTTTGCAAAAGAAAAATCCATCAATTTCTGTTGTTGCAACTCTATTCGGCGAAGGGGAAGATGCTGCATGGCTTGAGAAGAATAGTTTGGTAGATTGGGAAGAAGAAAAAACAAATGGAGTATTAGGAAGTGAATCCTTTGATAAATCTCAGCAGAGAGCAATTGCGTTAGGTTTGAATAAGAAGAGGCCACTATTGGTTATCCAAGGACCTCCCGGTACAGGCAAGACCGGTTTACTCAAGCAAATAATAACATGCGCCGTGGAACAAGGTGAAAGGGTTCTTGTCACAGCACCTACCAATGCAGCTGTTGATAATATGGTTGAAAAGCTTTCAAATGTTGGAATAAATATTGTTCGAGTTGGAAATCCCGCTCGTATATCAAAAACAGTAGCATCAAAGTCCTTAGGAGAAATTGTAAATGCGAAGCTTGCAAGTTTTCGCGAAGAGTGTGAGAGGAAGAAATCTGATCTAAGGAAAGATCTAAGACAATGTTTGAGGGATGATTCATTAGCTGCAGGCATACGCCAACTTCTGAAACAGTTGGGAAAGTCGCTAAAGAAAAAGGAAAAGCAGACTATTATTGAAGTTCTATCTAGTGCTCAGGTTGTGCTTGCCACCAATACCGGAGCAGCCGATCCCATGATTCGAAAGCTAAATGCTTTTGACTTGGTTGTCATAGATGAAGCTGGACAGGCAATTGAACCGTCTTGCTGGATTCCTATATTGCAGGCGAAACGATGCATTCTTGTTGGTGATCAATGCCAACTAGCTCCTGTGATATTTTCTAGAAAGGCATTAGAAGGTGGTTTAGGAATATCGCTACTCGAGAGAGCTGCAACTCTGCATGAAGGGATTCTCACCACTAGGTTAACGACACAATACCGTATGAATGATGCCATTGCAAGTTGGGCTTCGAAGGAGATGTATGGAGGATTATTGAAGTCCTCCAAGACTGTCTTTTCTCATCTTCTTGTAGACTCTCCTTTTGTTAAGCCTACATGGATAACACAGTGTCCTCTACTACTTCTTGACACTCGAATGCCGTATGGAAGTCTTTCAATTGGTTGCGAAGAGCATCTAGATCAGGCTGGAACAGGCTCGTTGTATAATGAAGGAGAAGCTGATATAGTTTTGCAGCATGTATTTTCCTTAATTTATGCTGGTGTTAGCCCAAATGCTATTGTAGTTCAGTCCCCATATGTTGCTCAAGTTCAACTTTTGAGGGACATGCTTGACGGGGTTCCTGAAGCTGCCGGTACTGAAGTTTCCACAATTGATAGTTTTCAAGGTCGGGAAGCTGATGCTGTAATTTTATCAATGGTACGATCAAACACATTGGGAGCTGTCGGATTCCTTGGCGATAGCAGAAGAATCAACGTTGCCATCACAAGAGCGCGCAAGCATTTAGCTGTAGTCTGTGACAGCTCAACTATATGCCACAACACGTTCCTAGCAAGACTTATGCGCCATATTCGACACTTTGGTAGGGTGAAGCACGTAGAACCAGATAGTTTTGGAGGAGGGTTTGGACTTGGCATGAATCCAATGTTACCTTCTATGGATTAG
Protein sequence

>Msa0050320

MEATSTCFFCGRIPSKSKLASSSSFGSFCLLTRNNITTIMCKTSLKTHNRVVQNITNSNETKAPSTTKRRRRRRKNDAAAIEIQLPFENMNKNLHVHENIGDPIGWKDVGKSVVSWIRESMKSMAFEIASAELLEDLEFSEMKQRMGPGLTFVIQAQPYLNAVPMPLGLEVTCLKACTHYPTLFDHFQRELRDVLQDMQSKGLVEDWRQTQSWKLLKELANSAQHRAVARNVTQPKSVQGVLGMDRERVKVLQQRIDEFTQNMSELLNIERDVELEFTQEELDAVPKQDDASDPSKPIEFLVSHSQPQQELCDTICNLNAISTSTGLGGMHLVLFKIEGNHRLPPTTLSPGEMVCVRTCDSKGAVTTSCMQGVVENLGDDGYSITVALESRHGDPTFSKLFGKNVRIDRIQGLADTLTYERNCEALMLLQKNGLQKKNPSISVVATLFGEGEDAAWLEKNSLVDWEEEKTNGVLGSESFDKSQQRAIALGLNKKRPLLVIQGPPGTGKTGLLKQIITCAVEQGERVLVTAPTNAAVDNMVEKLSNVGINIVRVGNPARISKTVASKSLGEIVNAKLASFREECERKKSDLRKDLRQCLRDDSLAAGIRQLLKQLGKSLKKKEKQTIIEVLSSAQVVLATNTGAADPMIRKLNAFDLVVIDEAGQAIEPSCWIPILQAKRCILVGDQCQLAPVIFSRKALEGGLGISLLERAATLHEGILTTRLTTQYRMNDAIASWASKEMYGGLLKSSKTVFSHLLVDSPFVKPTWITQCPLLLLDTRMPYGSLSIGCEEHLDQAGTGSLYNEGEADIVLQHVFSLIYAGVSPNAIVVQSPYVAQVQLLRDMLDGVPEAAGTEVSTIDSFQGREADAVILSMVRSNTLGAVGFLGDSRRINVAITRARKHLAVVCDSSTICHNTFLARLMRHIRHFGRVKHVEPDSFGGGFGLGMNPMLPSMD*