Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0655970 | XP_039685462.1 | 94.156 | 616 | 7 | 1 | 1 | 616 | 35 | 621 | 0.0 | 1179 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0655970 | A0A396GMQ1 | 94.156 | 616 | 7 | 1 | 1 | 616 | 35 | 621 | 0.0 | 1179 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012770 | Msa0655970 | 0.808511 | 2.987668e-50 | -8.615850e-47 |
| Msa0113920 | Msa0655970 | 0.807828 | 4.176466e-50 | -8.615850e-47 |
| Msa0616580 | Msa0655970 | 0.886826 | 2.437761e-72 | -8.615850e-47 |
| Msa0655970 | Msa0699910 | 0.909744 | 4.060426e-82 | -8.615850e-47 |
| Msa0655970 | Msa0709380 | 0.808660 | 2.776304e-50 | -8.615850e-47 |
| Msa0655970 | Msa0880050 | 0.842039 | 3.298233e-58 | -8.615850e-47 |
| Msa0655970 | Msa1041830 | 0.844724 | 6.331588e-59 | -8.615850e-47 |
| Msa0655970 | Msa1052000 | 0.802649 | 5.074408e-49 | -8.615850e-47 |
| Msa0655970 | Msa1124980 | 0.829939 | 3.886983e-55 | -8.615850e-47 |
| Msa0655970 | Msa1129600 | 0.832132 | 1.125387e-55 | -8.615850e-47 |
| Msa0655970 | Msa1167360 | 0.830905 | 2.256382e-55 | -8.615850e-47 |
| Msa0655970 | Msa1383500 | 0.807837 | 4.158479e-50 | -8.615850e-47 |
| Msa0655970 | Msa1401070 | 0.821670 | 3.569311e-53 | -8.615850e-47 |
| Msa0655970 | Msa1423050 | 0.841655 | 4.166060e-58 | -8.615850e-47 |
| Msa0416340 | Msa0655970 | 0.809084 | 2.253541e-50 | -8.615850e-47 |
| Msa0463970 | Msa0655970 | 0.819399 | 1.185206e-52 | -8.615850e-47 |
| Msa0468660 | Msa0655970 | 0.804192 | 2.430404e-49 | -8.615850e-47 |
| Msa0564160 | Msa0655970 | -0.844223 | 8.636677e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0655970 | MtrunA17_Chr8g0376181 | 94.156 | 616 | 7 | 1 | 1 | 616 | 35 | 621 | 0.0 | 1179 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0655970 | AT1G23170.2 | 57.093 | 578 | 201 | 8 | 17 | 578 | 15 | 561 | 0.0 | 613 |
| Msa0655970 | AT1G70770.2 | 57.793 | 571 | 198 | 7 | 19 | 578 | 14 | 552 | 0.0 | 595 |
| Msa0655970 | AT1G70770.1 | 57.793 | 571 | 198 | 7 | 19 | 578 | 14 | 552 | 0.0 | 595 |
| Msa0655970 | AT1G23170.1 | 52.422 | 578 | 182 | 9 | 17 | 578 | 15 | 515 | 0.0 | 527 |
| Msa0655970 | AT3G11880.2 | 45.661 | 484 | 198 | 14 | 111 | 578 | 3 | 437 | 4.47e-119 | 362 |
| Msa0655970 | AT3G11880.1 | 46.855 | 461 | 187 | 13 | 134 | 578 | 3 | 421 | 4.11e-118 | 358 |
| Msa0655970 | AT3G11880.3 | 46.774 | 372 | 141 | 10 | 111 | 471 | 3 | 328 | 2.48e-93 | 291 |
| Msa0655970 | AT3G11880.4 | 43.769 | 329 | 128 | 10 | 111 | 428 | 3 | 285 | 8.48e-69 | 226 |
Find 201 sgRNAs with CRISPR-Local
Find 394 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAAGTGTTGTTCCATTAAA+AGG | 0.106037 | 4_3:-65001043 | None:intergenic |
| TTCCTTTCTGCTTTGGTCTT+TGG | 0.139887 | 4_3:+64997753 | Msa0655970:CDS |
| TCTCAGTTGGTTTGTATTCT+TGG | 0.158367 | 4_3:+64999189 | Msa0655970:CDS |
| ATGCGGTTTGCGGATTATTT+TGG | 0.187926 | 4_3:+64996627 | Msa0655970:CDS |
| CTTACGAAGAGTTGACTTAT+AGG | 0.199809 | 4_3:-64995872 | None:intergenic |
| CTACCCCAACATGGAATCTT+TGG | 0.234838 | 4_3:+65000504 | Msa0655970:CDS |
| CCCTAAAGCACGGGCTGTTT+TGG | 0.242352 | 4_3:+64999393 | Msa0655970:CDS |
| AGTGAGAGAGATATGAAAAT+TGG | 0.252190 | 4_3:-64995930 | None:intergenic |
| CTCTCTCAGAATGGGATATA+TGG | 0.269677 | 4_3:-64999625 | None:intergenic |
| CCAAAACAGCCCGTGCTTTA+GGG | 0.272787 | 4_3:-64999393 | None:intergenic |
| TTCCTTGGGTGAAATTGTTC+AGG | 0.284035 | 4_3:+64996682 | Msa0655970:CDS |
| CACTTAGTTCCTTTCTGCTT+TGG | 0.285709 | 4_3:+64997746 | Msa0655970:CDS |
| ACCAAAACAGCCCGTGCTTT+AGG | 0.295717 | 4_3:-64999394 | None:intergenic |
| TGTTTCATTGCTTTACTTCC+AGG | 0.297609 | 4_3:-64999666 | None:intergenic |
| AACCCTTGGTCACAGTTTGC+TGG | 0.323214 | 4_3:-64997801 | None:intergenic |
| CTAGTTCTTTCAACTTTAAG+AGG | 0.329557 | 4_3:-64998596 | None:intergenic |
| CAACCCGCAATCCAGGGATT+TGG | 0.335667 | 4_3:+64999250 | Msa0655970:CDS |
| TCAGCGCTGCTCAGTTTCCT+TGG | 0.337666 | 4_3:+64996667 | Msa0655970:CDS |
| ACCTTAGGTTTCTTCACCTT+TGG | 0.337808 | 4_3:-64996379 | None:intergenic |
| GTGGCTCTTGGCGGTTCTCC+TGG | 0.348034 | 4_3:+64999648 | Msa0655970:CDS |
| AAATCCAAAGATTCCATGTT+GGG | 0.364480 | 4_3:-65000508 | None:intergenic |
| TCGAGAATATTGTGCATTAC+CGG | 0.366695 | 4_3:+65000572 | Msa0655970:three_prime_UTR |
| TCGATAAAGATCCGGAATTC+AGG | 0.372452 | 4_3:+65001082 | Msa0655970:three_prime_UTR |
| ACATCAAATAAATTATAAAA+TGG | 0.373047 | 4_3:-65000773 | None:intergenic |
| GTTGAAGGTGAGTTTGTTAC+CGG | 0.374708 | 4_3:-64996137 | None:intergenic |
| AAACCAAATCCCTGGATTGC+GGG | 0.379701 | 4_3:-64999253 | None:intergenic |
| ATGAAGAACCGAGAAAAGAT+AGG | 0.379893 | 4_3:-65001014 | None:intergenic |
| TGTGACCAAGGGTTCCAAAA+AGG | 0.391826 | 4_3:+64997810 | Msa0655970:CDS |
| GCTTGTAGCATTCAGTGCTT+TGG | 0.393155 | 4_3:-64999891 | None:intergenic |
| TATTCTCGAATGCTCAGAAC+TGG | 0.397435 | 4_3:-65000558 | None:intergenic |
| AGCAGCGTCGTTTCCGTTGA+AGG | 0.401884 | 4_3:-64996152 | None:intergenic |
| TACAGGTGTAGTTGCCTCAT+TGG | 0.408090 | 4_3:-65000866 | None:intergenic |
| TAATAAGAGCATCAGGCTTT+CGG | 0.411863 | 4_3:-64998930 | None:intergenic |
| GTTGAGGTCAATCTACTTTG+AGG | 0.412827 | 4_3:+65000735 | Msa0655970:three_prime_UTR |
| CACTTGTTGAGCTTGTCATT+TGG | 0.414490 | 4_3:+65001059 | Msa0655970:three_prime_UTR |
| GCTTCCGCCACCGTCACCTT+AGG | 0.420485 | 4_3:-64996394 | None:intergenic |
| GATCGCTGCTTCGATCTAAC+TGG | 0.421839 | 4_3:-64996262 | None:intergenic |
| CAGCGCTGCTCAGTTTCCTT+GGG | 0.422296 | 4_3:+64996668 | Msa0655970:CDS |
| GGGAGATCCTAAAGAACTTT+AGG | 0.423156 | 4_3:+65000204 | Msa0655970:CDS |
| CCTATAGTGGTTAGCAAAAG+TGG | 0.424512 | 4_3:+64999227 | Msa0655970:CDS |
| GTGGGAGATGGATCCGGAGG+GGG | 0.426014 | 4_3:-64996011 | None:intergenic |
| GAAGATTGATGCAGCTGATC+TGG | 0.427235 | 4_3:+64996423 | Msa0655970:CDS |
| AAAGTGGCAACCCGCAATCC+AGG | 0.430699 | 4_3:+64999243 | Msa0655970:CDS |
| CAAGTCGCTTGAGTTGCATT+CGG | 0.432376 | 4_3:+64996177 | Msa0655970:CDS |
| TACTGTATTGCCCAAATTGA+GGG | 0.436105 | 4_3:+64998951 | Msa0655970:CDS |
| GCACTTTATTACGAGGCAAT+TGG | 0.442187 | 4_3:-65000659 | None:intergenic |
| CCTAAAGAACTTTAGGCAAA+AGG | 0.442468 | 4_3:+65000211 | Msa0655970:CDS |
| ATCTCCCTGAGTGGCTCATA+AGG | 0.444202 | 4_3:-65000188 | None:intergenic |
| TCACTCAGTATCCTGAATTC+CGG | 0.445294 | 4_3:-65001093 | None:intergenic |
| CTCTTAAAGTTGAAAGAACT+AGG | 0.447191 | 4_3:+64998597 | Msa0655970:CDS |
| CAAGTGTTGTTCCATTAAAA+GGG | 0.449078 | 4_3:-65001042 | None:intergenic |
| GATGATGATGTGGATCGGTC+AGG | 0.450841 | 4_3:+64996316 | Msa0655970:CDS |
| TGAGGCGAGGACTGCGGCGG+AGG | 0.454431 | 4_3:+64996222 | Msa0655970:CDS |
| GGCGGTGTGGGAGATGGATC+CGG | 0.460314 | 4_3:-64996017 | None:intergenic |
| CTAAATTAACTTCATAATAC+AGG | 0.461268 | 4_3:-65000883 | None:intergenic |
| ACAAGTAACTTCAAAATCTC+AGG | 0.462196 | 4_3:+64997840 | Msa0655970:CDS |
| CTCACGGCGCCGATCACGGC+TGG | 0.463140 | 4_3:+64996056 | Msa0655970:CDS |
| CAGCTTACATCAACCACAAT+GGG | 0.464866 | 4_3:+65000627 | Msa0655970:three_prime_UTR |
| GACCTTCTGCCAGCCGTGAT+CGG | 0.468288 | 4_3:-64996065 | None:intergenic |
| GGTGAGTTTGTTACCGGTAC+CGG | 0.468566 | 4_3:-64996131 | None:intergenic |
| GCACTGAATGCTACAAGCTA+TGG | 0.469110 | 4_3:+64999896 | Msa0655970:CDS |
| CTGAGAGAGGTGGCTCTTGG+CGG | 0.469550 | 4_3:+64999639 | Msa0655970:CDS |
| ATTGATTCCTCCTCCAGCAT+TGG | 0.470236 | 4_3:+64999444 | Msa0655970:CDS |
| TCAGTAGGAGATCTCTCAGT+TGG | 0.471593 | 4_3:+64999176 | Msa0655970:CDS |
| GGACAGTATTCTTACTGACT+TGG | 0.473081 | 4_3:+64997774 | Msa0655970:CDS |
| TGTGGGAGATGGATCCGGAG+GGG | 0.474914 | 4_3:-64996012 | None:intergenic |
| GTGGATCGGTCAGGGGAGAA+TGG | 0.475403 | 4_3:+64996325 | Msa0655970:CDS |
| ACCTTTACTCTAGCTGAAGA+TGG | 0.476260 | 4_3:-64999493 | None:intergenic |
| AATACAGTAATAAGAGCATC+AGG | 0.478128 | 4_3:-64998937 | None:intergenic |
| CGCTTGCTACAATGTTCTCC+TGG | 0.480089 | 4_3:-65000109 | None:intergenic |
| CGGATCAAAGTTTCCAATGC+TGG | 0.481600 | 4_3:-64999457 | None:intergenic |
| GTTAACGGTGCTGTAAGAAA+AGG | 0.482437 | 4_3:+64999415 | Msa0655970:CDS |
| AGTTAATTTAGTTGAATCAA+AGG | 0.483236 | 4_3:+65000921 | Msa0655970:three_prime_UTR |
| ACCGTGCTTGCTGTGGCTGT+TGG | 0.484447 | 4_3:+65000469 | Msa0655970:CDS |
| TTACTGTATTGCCCAAATTG+AGG | 0.486297 | 4_3:+64998950 | Msa0655970:CDS |
| AAGAGCCACCTCTCTCAGAA+TGG | 0.486370 | 4_3:-64999634 | None:intergenic |
| ATTCTGAGAGAGGTGGCTCT+TGG | 0.487210 | 4_3:+64999636 | Msa0655970:CDS |
| TGAAGAACCGAGAAAAGATA+GGG | 0.488422 | 4_3:-65001013 | None:intergenic |
| GGAAGAGTTTCACGAGGCCA+TGG | 0.488867 | 4_3:+65000424 | Msa0655970:CDS |
| TAGCCAGCAAACTGTGACCA+AGG | 0.494511 | 4_3:+64997798 | Msa0655970:CDS |
| GCGGAATCTCCTACCTATAG+TGG | 0.495190 | 4_3:+64999214 | Msa0655970:CDS |
| AGATTCGGCGGTGTGGGAGA+TGG | 0.497613 | 4_3:-64996023 | None:intergenic |
| TCATTTGGTCGATAAAGATC+CGG | 0.497766 | 4_3:+65001074 | Msa0655970:three_prime_UTR |
| GCTGCTTCTTTCGATACTCC+AGG | 0.497984 | 4_3:-64999844 | None:intergenic |
| TGAGCAGGAGAAAGTTTACC+AGG | 0.499942 | 4_3:+65000091 | Msa0655970:intron |
| GCAACCATCCATACAATCAC+TGG | 0.500036 | 4_3:-64999006 | None:intergenic |
| TCCTTGGGTGAAATTGTTCA+GGG | 0.500312 | 4_3:+64996683 | Msa0655970:CDS |
| AAGCAGCTTCTATTGCACTT+TGG | 0.504270 | 4_3:+64999860 | Msa0655970:CDS |
| AAGGAAGCTAACGGCGTCGC+CGG | 0.508318 | 4_3:+64996112 | Msa0655970:CDS |
| GATACAGATGATGCGGTTTG+CGG | 0.509299 | 4_3:+64996617 | Msa0655970:CDS |
| GTCTCAGATATGTGAGAAAG+TGG | 0.510412 | 4_3:-64997676 | None:intergenic |
| AGAGCCACCTCTCTCAGAAT+GGG | 0.511188 | 4_3:-64999633 | None:intergenic |
| CTTCTTATGCTTCTTCGCGT+AGG | 0.511297 | 4_3:-64996089 | None:intergenic |
| TTGCCAGCATGGTGATGTAA+AGG | 0.515042 | 4_3:-65000839 | None:intergenic |
| AATTTCGCTATCATAGCAGC+AGG | 0.515210 | 4_3:+64999708 | Msa0655970:CDS |
| GGTGTGGGAGATGGATCCGG+AGG | 0.515556 | 4_3:-64996014 | None:intergenic |
| TGTCTCCTTATGAGCCACTC+AGG | 0.516916 | 4_3:+65000183 | Msa0655970:CDS |
| AAATATTGCAAGATAATCTC+AGG | 0.519787 | 4_3:+65000403 | Msa0655970:CDS |
| CCTTTACTCTAGCTGAAGAT+GGG | 0.524391 | 4_3:-64999492 | None:intergenic |
| GCATATCAGATGAGAGAATA+CGG | 0.525068 | 4_3:-65001190 | None:intergenic |
| GATTGTATGGATGGTTGCTC+AGG | 0.525541 | 4_3:+64999011 | Msa0655970:CDS |
| GGTGAGAAAGTGATTGAAAG+AGG | 0.526675 | 4_3:-64995960 | None:intergenic |
| GGAGTTAGATTCGGCGGTGT+GGG | 0.527264 | 4_3:-64996029 | None:intergenic |
| CAGAAAGGAACTAAGTGCCT+CGG | 0.527844 | 4_3:-64997740 | None:intergenic |
| TCAAATTTAACCTACTGGAA+TGG | 0.528782 | 4_3:-64998660 | None:intergenic |
| ACCAACAGCCACAGCAAGCA+CGG | 0.529034 | 4_3:-65000470 | None:intergenic |
| CGCGAAGAAGCATAAGAAGA+AGG | 0.529676 | 4_3:+64996093 | Msa0655970:CDS |
| TATACAAGACATCAGTTGAC+TGG | 0.531046 | 4_3:+64997701 | Msa0655970:CDS |
| ATGATGATGTGGATCGGTCA+GGG | 0.531980 | 4_3:+64996317 | Msa0655970:CDS |
| AAAAGCTGAAGAGGTGAAGA+AGG | 0.533059 | 4_3:+64996348 | Msa0655970:CDS |
| AAGCTGCAAAACCAAATCCC+TGG | 0.534627 | 4_3:-64999261 | None:intergenic |
| GTGTGGGAGATGGATCCGGA+GGG | 0.536705 | 4_3:-64996013 | None:intergenic |
| AGAAAGGAACTAAGTGCCTC+GGG | 0.536775 | 4_3:-64997739 | None:intergenic |
| GCTAACGGCGTCGCCGGTAC+CGG | 0.537790 | 4_3:+64996118 | Msa0655970:CDS |
| CGCCGATCACGGCTGGCAGA+AGG | 0.538888 | 4_3:+64996063 | Msa0655970:CDS |
| TTAACCTACTGGAATGGAGA+TGG | 0.539815 | 4_3:-64998654 | None:intergenic |
| AAAGATAGGGGAAAGGACAC+AGG | 0.540151 | 4_3:-65001000 | None:intergenic |
| GTGAGATGAGGAGTTAGATT+CGG | 0.541523 | 4_3:-64996038 | None:intergenic |
| GACAGTATTCTTACTGACTT+GGG | 0.542880 | 4_3:+64997775 | Msa0655970:CDS |
| TCATCTCACGGCGCCGATCA+CGG | 0.544498 | 4_3:+64996052 | Msa0655970:CDS |
| TTCATCCATGATTGAAAAGG+GGG | 0.544826 | 4_3:-64995981 | None:intergenic |
| CCCATCTTCAGCTAGAGTAA+AGG | 0.544992 | 4_3:+64999492 | Msa0655970:CDS |
| TGCATTCGGAGGATCGGAGA+AGG | 0.547304 | 4_3:+64996191 | Msa0655970:CDS |
| AATATTTGTTGCTTTAGCGT+TGG | 0.547458 | 4_3:+64998900 | Msa0655970:CDS |
| AGCTATTGTACTATTTACAT+TGG | 0.548646 | 4_3:+65000977 | Msa0655970:three_prime_UTR |
| TTGGTTTGTATTCTTGGTCG+CGG | 0.548699 | 4_3:+64999195 | Msa0655970:CDS |
| GGTAACAAACTCACCTTCAA+CGG | 0.548782 | 4_3:+64996139 | Msa0655970:CDS |
| AAAGTTTCCAATGCTGGAGG+AGG | 0.556105 | 4_3:-64999451 | None:intergenic |
| TTTGTCCACCCCTAAAGCAC+GGG | 0.556433 | 4_3:+64999384 | Msa0655970:CDS |
| ATGCCTTTACATCACCATGC+TGG | 0.557569 | 4_3:+65000836 | Msa0655970:three_prime_UTR |
| GACCTTTACCGTGCTTGCTG+TGG | 0.557982 | 4_3:+65000462 | Msa0655970:CDS |
| GAAATCCAAAGATTCCATGT+TGG | 0.561519 | 4_3:-65000509 | None:intergenic |
| ACAGGCTACAGAAAGATTTG+AGG | 0.563848 | 4_3:+64999602 | Msa0655970:intron |
| TATTGTGCATTACCGGCAGT+TGG | 0.567491 | 4_3:+65000579 | Msa0655970:three_prime_UTR |
| TTGAGTTGCATTCGGAGGAT+CGG | 0.568593 | 4_3:+64996185 | Msa0655970:CDS |
| CACTGAATGCTACAAGCTAT+GGG | 0.569907 | 4_3:+64999897 | Msa0655970:CDS |
| CAAAACAGCCCGTGCTTTAG+GGG | 0.574054 | 4_3:-64999392 | None:intergenic |
| GGCATCGTTTGAGCAGAATG+AGG | 0.575026 | 4_3:+64996593 | Msa0655970:intron |
| AAAACCAAATCCCTGGATTG+CGG | 0.578328 | 4_3:-64999254 | None:intergenic |
| AGCCACAGCAAGCACGGTAA+AGG | 0.579436 | 4_3:-65000464 | None:intergenic |
| TATTTGATGCAACCAACTGC+CGG | 0.580342 | 4_3:-65000591 | None:intergenic |
| GCTATCATAGCAGCAGGAGA+AGG | 0.581836 | 4_3:+64999714 | Msa0655970:CDS |
| ACTCCCAGTGATTGTATGGA+TGG | 0.582697 | 4_3:+64999002 | Msa0655970:CDS |
| GAAACCTAAGGTGACGGTGG+CGG | 0.583163 | 4_3:+64996390 | Msa0655970:CDS |
| ATCTATGTGCAGGCTTCAGT+AGG | 0.583240 | 4_3:+64999161 | Msa0655970:intron |
| ACCGAGAAAAGATAGGGGAA+AGG | 0.583495 | 4_3:-65001007 | None:intergenic |
| AGGAGTTAGATTCGGCGGTG+TGG | 0.588248 | 4_3:-64996030 | None:intergenic |
| GTCCAAAGACCAAAGCAGAA+AGG | 0.592435 | 4_3:-64997755 | None:intergenic |
| GAAGAGTTTCACGAGGCCAT+GGG | 0.594706 | 4_3:+65000425 | Msa0655970:CDS |
| GGAGAATGGAAAAGCTGAAG+AGG | 0.595415 | 4_3:+64996339 | Msa0655970:CDS |
| AACAGCCCGTGCTTTAGGGG+TGG | 0.598573 | 4_3:-64999389 | None:intergenic |
| GTCGCTTGAGTTGCATTCGG+AGG | 0.598827 | 4_3:+64996180 | Msa0655970:CDS |
| CATATATCCCATTCTGAGAG+AGG | 0.602504 | 4_3:+64999626 | Msa0655970:CDS |
| ACATCAACAATCTTAGCCAC+AGG | 0.603144 | 4_3:-64996711 | None:intergenic |
| CAACCATCCATACAATCACT+GGG | 0.608838 | 4_3:-64999005 | None:intergenic |
| GAAGGAAAATTCTTGAGGCG+AGG | 0.609341 | 4_3:+64996209 | Msa0655970:CDS |
| AAGTGGCAACCCGCAATCCA+GGG | 0.609912 | 4_3:+64999244 | Msa0655970:CDS |
| GTCTCCTTATGAGCCACTCA+GGG | 0.610196 | 4_3:+65000184 | Msa0655970:CDS |
| GTGATCGGCGCCGTGAGATG+AGG | 0.611262 | 4_3:-64996050 | None:intergenic |
| TCAGCTTACATCAACCACAA+TGG | 0.615351 | 4_3:+65000626 | Msa0655970:three_prime_UTR |
| GCGGAGGCTGAATTTGATGA+TGG | 0.617872 | 4_3:+64996238 | Msa0655970:CDS |
| TCCCTGAACAATTTCACCCA+AGG | 0.618599 | 4_3:-64996684 | None:intergenic |
| TTGGTTTGCTGAACCCATTG+TGG | 0.624346 | 4_3:-65000640 | None:intergenic |
| CGATGAAGACGATGATGATG+TGG | 0.624368 | 4_3:+64996306 | Msa0655970:CDS |
| ATTCTCGAATGCTCAGAACT+GGG | 0.627893 | 4_3:-65000557 | None:intergenic |
| TTTCATCCATGATTGAAAAG+GGG | 0.629081 | 4_3:-64995982 | None:intergenic |
| CAGATGACACAGAATAGTTG+AGG | 0.629463 | 4_3:+65000719 | Msa0655970:three_prime_UTR |
| TCTTGAGGCGAGGACTGCGG+CGG | 0.630323 | 4_3:+64996219 | Msa0655970:CDS |
| CTTTACTCTAGCTGAAGATG+GGG | 0.634564 | 4_3:-64999491 | None:intergenic |
| TGATGATGTGGATCGGTCAG+GGG | 0.634863 | 4_3:+64996318 | Msa0655970:CDS |
| ATGCTGGCAAAATGCCAATG+AGG | 0.634948 | 4_3:+65000852 | Msa0655970:three_prime_UTR |
| TTTACTCTAGCTGAAGATGG+GGG | 0.635009 | 4_3:-64999490 | None:intergenic |
| GTAATTCCGTGTTGATAGTG+AGG | 0.635327 | 4_3:+64995843 | Msa0655970:five_prime_UTR |
| CAGTTGACTGGATCAATCGT+CGG | 0.638176 | 4_3:+64997713 | Msa0655970:CDS |
| TCAGGATACTGAGTGAGCGA+AGG | 0.638319 | 4_3:+65001100 | Msa0655970:three_prime_UTR |
| GAATCTAACTCCTCATCTCA+CGG | 0.640221 | 4_3:+64996040 | Msa0655970:CDS |
| ACCAAAGGTGAAGAAACCTA+AGG | 0.640238 | 4_3:+64996378 | Msa0655970:CDS |
| AATCCAAAGATTCCATGTTG+GGG | 0.642323 | 4_3:-65000507 | None:intergenic |
| ATCAAAGTTTCCAATGCTGG+AGG | 0.642389 | 4_3:-64999454 | None:intergenic |
| GATCAATCGTCGGTCTCCCG+AGG | 0.644658 | 4_3:+64997723 | Msa0655970:CDS |
| TTCTTTAGGATCTCCCTGAG+TGG | 0.645060 | 4_3:-65000197 | None:intergenic |
| AATTCTTGAGGCGAGGACTG+CGG | 0.646090 | 4_3:+64996216 | Msa0655970:CDS |
| CATAAGAAGAAGGAAGCTAA+CGG | 0.647003 | 4_3:+64996103 | Msa0655970:CDS |
| AGCCAGCAAACTGTGACCAA+GGG | 0.647478 | 4_3:+64997799 | Msa0655970:CDS |
| TGTATTGCCCAAATTGAGGG+AGG | 0.648811 | 4_3:+64998954 | Msa0655970:CDS |
| GAAGAAGGTTAAGAAACCAA+AGG | 0.649224 | 4_3:+64996363 | Msa0655970:CDS |
| TCGGAGAAGGAAAATTCTTG+AGG | 0.649487 | 4_3:+64996204 | Msa0655970:CDS |
| GAAGAACCGAGAAAAGATAG+GGG | 0.649827 | 4_3:-65001012 | None:intergenic |
| ATGAGGAGATACAGATGATG+CGG | 0.649967 | 4_3:+64996610 | Msa0655970:CDS |
| GCATTATGCACTTTATTACG+AGG | 0.653396 | 4_3:-65000666 | None:intergenic |
| ATATCCCATTCTGAGAGAGG+TGG | 0.657382 | 4_3:+64999629 | Msa0655970:CDS |
| GGTGAAGAAACCTAAGGTGA+CGG | 0.658046 | 4_3:+64996384 | Msa0655970:CDS |
| TTACTCTAGCTGAAGATGGG+GGG | 0.666207 | 4_3:-64999489 | None:intergenic |
| ATTGTTCAGGGAGTCACCTG+TGG | 0.666973 | 4_3:+64996695 | Msa0655970:CDS |
| GAATGAGAAAGCATTGACAA+CGG | 0.668814 | 4_3:+65000339 | Msa0655970:intron |
| AAGACGATGATGATGTGGAT+CGG | 0.676350 | 4_3:+64996311 | Msa0655970:CDS |
| AGATGAGGAGTTAGATTCGG+CGG | 0.685801 | 4_3:-64996035 | None:intergenic |
| GAAGAAACCTAAGGTGACGG+TGG | 0.705385 | 4_3:+64996387 | Msa0655970:CDS |
| TCGTAATAAAGTGCATAATG+CGG | 0.707183 | 4_3:+65000668 | Msa0655970:three_prime_UTR |
| ATTTGACCTCACTATCAACA+CGG | 0.710546 | 4_3:-64995849 | None:intergenic |
| ATCTCAGGAAGAGTTTCACG+AGG | 0.743689 | 4_3:+65000418 | Msa0655970:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACATCAAATAAATTATAAAA+TGG | - | chr4_3:65000776-65000795 | None:intergenic | 10.0% |
| !! | TTAATGTTGAGATTTAATTA+CGG | + | chr4_3:64996487-64996506 | Msa0655970:intron | 15.0% |
| !! | ACTGATTATTATTATTTAGT+GGG | + | chr4_3:64996859-64996878 | Msa0655970:intron | 15.0% |
| !! | TATATAAGTTCACATTATAA+AGG | - | chr4_3:64997307-64997326 | None:intergenic | 15.0% |
| !!! | GAACTTATATAGTTTTTTTA+AGG | + | chr4_3:64997316-64997335 | Msa0655970:intron | 15.0% |
| !!! | TATATAGTTTTTTTAAGGTT+TGG | + | chr4_3:64997321-64997340 | Msa0655970:intron | 15.0% |
| !! | GTGTTAATTAAACATTATTT+GGG | - | chr4_3:64998092-64998111 | None:intergenic | 15.0% |
| !! | TGTGTTAATTAAACATTATT+TGG | - | chr4_3:64998093-64998112 | None:intergenic | 15.0% |
| !!! | ATATTATTTTACCAACTATT+CGG | - | chr4_3:64998536-64998555 | None:intergenic | 15.0% |
| !!! | TGAATATGAATATGATTTTA+GGG | - | chr4_3:64998779-64998798 | None:intergenic | 15.0% |
| !!! | TTGAATATGAATATGATTTT+AGG | - | chr4_3:64998780-64998799 | None:intergenic | 15.0% |
| !!! | TTTATTTTGATGACAAATCA+TGG | + | chr4_3:64996747-64996766 | Msa0655970:intron | 20.0% |
| !!! | CACTGATTATTATTATTTAG+TGG | + | chr4_3:64996858-64996877 | Msa0655970:intron | 20.0% |
| !! | ATCATACTTATATCTTAACT+AGG | + | chr4_3:64997004-64997023 | Msa0655970:intron | 20.0% |
| !! | TCATACTTATATTCTTAACT+AGG | + | chr4_3:64997047-64997066 | Msa0655970:intron | 20.0% |
| !! | ATAGAGCTAAATAATATGTT+TGG | + | chr4_3:64997075-64997094 | Msa0655970:intron | 20.0% |
| !!! | TATTTTAACTTGGTAGAAAA+AGG | - | chr4_3:64997385-64997404 | None:intergenic | 20.0% |
| !!! | GACACATTAATATTTTAACT+TGG | - | chr4_3:64997395-64997414 | None:intergenic | 20.0% |
| !! | CCTGATAAAACATAAATATT+CGG | - | chr4_3:64997654-64997673 | None:intergenic | 20.0% |
| !!! | GTTATTATTGGATTTTGTTT+AGG | - | chr4_3:64997940-64997959 | None:intergenic | 20.0% |
| !!! | GTTTTTTTGTTCACTATTAA+GGG | + | chr4_3:64998004-64998023 | Msa0655970:intron | 20.0% |
| !! | ATCAATATCAAGACAAATAA+AGG | + | chr4_3:64998261-64998280 | Msa0655970:intron | 20.0% |
| !! | AAGTAAAATTCACATAAACA+GGG | - | chr4_3:64998703-64998722 | None:intergenic | 20.0% |
| !! | TAAGTAAAATTCACATAAAC+AGG | - | chr4_3:64998704-64998723 | None:intergenic | 20.0% |
| !! | GACTTGTAAAAAAAACTTAT+TGG | + | chr4_3:64998729-64998748 | Msa0655970:intron | 20.0% |
| !!! | AACATATTCTTCATTTTGAA+AGG | - | chr4_3:64998822-64998841 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTACCCTTTCAAA+AGG | + | chr4_3:64999089-64999108 | Msa0655970:intron | 20.0% |
| !! | AATATTAAAAATCTATGTGC+AGG | + | chr4_3:64999151-64999170 | Msa0655970:intron | 20.0% |
| !! | AAGCAAATAACAAAACATAA+TGG | - | chr4_3:64999357-64999376 | None:intergenic | 20.0% |
| !! | AGAAATCAAACAATAAAATC+AGG | - | chr4_3:64999747-64999766 | None:intergenic | 20.0% |
| !!! | TTTTTGTAATCTTTTTTACG+AGG | + | chr4_3:64999957-64999976 | Msa0655970:intron | 20.0% |
| !! | AATAAGTATATAGAGTTTCA+TGG | - | chr4_3:65000049-65000068 | None:intergenic | 20.0% |
| !! | TATTTGCTCTTATTCTTTAT+TGG | + | chr4_3:65000065-65000084 | Msa0655970:intron | 20.0% |
| !! | CTAAATTAACTTCATAATAC+AGG | - | chr4_3:65000886-65000905 | None:intergenic | 20.0% |
| !! | AGTTAATTTAGTTGAATCAA+AGG | + | chr4_3:65000921-65000940 | Msa0655970:three_prime_UTR | 20.0% |
| !!! | CATTTAACTCTAAAAAGTTA+TGG | - | chr4_3:65001158-65001177 | None:intergenic | 20.0% |
| !!! | CATAACTTTTTAGAGTTAAA+TGG | + | chr4_3:65001156-65001175 | Msa0655970:three_prime_UTR | 20.0% |
| !! | TTTTCATCCATGATTGAAAA+GGG | - | chr4_3:64995986-64996005 | None:intergenic | 25.0% |
| !!! | TTTAATTACGGTTTTGTGAT+TGG | + | chr4_3:64996499-64996518 | Msa0655970:intron | 25.0% |
| !!! | TGCATGTTTGTTTTTGAATT+AGG | + | chr4_3:64996572-64996591 | Msa0655970:intron | 25.0% |
| ! | TTCAACTGTTATATATGTTC+TGG | + | chr4_3:64996820-64996839 | Msa0655970:intron | 25.0% |
| !! | TATATATGTTCTGGTGTTTT+TGG | + | chr4_3:64996829-64996848 | Msa0655970:intron | 25.0% |
| ! | CAAATCTTGTAACAGAAATT+GGG | - | chr4_3:64996915-64996934 | None:intergenic | 25.0% |
| ! | ACAAATCTTGTAACAGAAAT+TGG | - | chr4_3:64996916-64996935 | None:intergenic | 25.0% |
| !!! | TATGTTTGGAGCTTTTAATT+TGG | + | chr4_3:64997089-64997108 | Msa0655970:intron | 25.0% |
| ! | TATAAAACATTTCAGTACTG+TGG | - | chr4_3:64997466-64997485 | None:intergenic | 25.0% |
| !! | GATGTTGTTTATCATAATCT+TGG | + | chr4_3:64997594-64997613 | Msa0655970:intron | 25.0% |
| !! | CCGAATATTTATGTTTTATC+AGG | + | chr4_3:64997651-64997670 | Msa0655970:intron | 25.0% |
| !!! | GGTTTTTTTGTTCACTATTA+AGG | + | chr4_3:64998003-64998022 | Msa0655970:intron | 25.0% |
| ! | AATGAAGATCCAATAGAAAA+GGG | - | chr4_3:64998207-64998226 | None:intergenic | 25.0% |
| ! | AAATGAAGATCCAATAGAAA+AGG | - | chr4_3:64998208-64998227 | None:intergenic | 25.0% |
| !!! | TTGTACTTATCCTTTTGAAA+GGG | - | chr4_3:64999102-64999121 | None:intergenic | 25.0% |
| !! | GAAAAGTATGTAAATGTTTC+TGG | + | chr4_3:64999287-64999306 | Msa0655970:intron | 25.0% |
| !! | TCAATATGTTGCTATTATAC+AGG | + | chr4_3:64999584-64999603 | Msa0655970:intron | 25.0% |
| !!! | ATGGACTGATTTAACTATTT+TGG | + | chr4_3:65000311-65000330 | Msa0655970:intron | 25.0% |
| ! | AAATATTGCAAGATAATCTC+AGG | + | chr4_3:65000403-65000422 | Msa0655970:CDS | 25.0% |
| ! | AGCTATTGTACTATTTACAT+TGG | + | chr4_3:65000977-65000996 | Msa0655970:three_prime_UTR | 25.0% |
| AATTGGAACAGAAAAAACGA+AGG | - | chr4_3:64995916-64995935 | None:intergenic | 30.0% | |
| AGTGAGAGAGATATGAAAAT+TGG | - | chr4_3:64995933-64995952 | None:intergenic | 30.0% | |
| TTTCATCCATGATTGAAAAG+GGG | - | chr4_3:64995985-64996004 | None:intergenic | 30.0% | |
| ! | GTTTTCATCCATGATTGAAA+AGG | - | chr4_3:64995987-64996006 | None:intergenic | 30.0% |
| ! | GACTTTTCTCGTTGATATAT+CGG | + | chr4_3:64996447-64996466 | Msa0655970:CDS | 30.0% |
| TATATCTTAACTAGGAACTC+AGG | + | chr4_3:64997012-64997031 | Msa0655970:intron | 30.0% | |
| ATATCTTAACTAGGAACTCA+GGG | + | chr4_3:64997013-64997032 | Msa0655970:intron | 30.0% | |
| AGAAAGAAACGTGTTAAACT+TGG | + | chr4_3:64997130-64997149 | Msa0655970:intron | 30.0% | |
| GACTTATAAAAACTGCTACA+TGG | - | chr4_3:64997162-64997181 | None:intergenic | 30.0% | |
| ACAAGTAACTTCAAAATCTC+AGG | + | chr4_3:64997840-64997859 | Msa0655970:CDS | 30.0% | |
| ! | TTAGCTAGTTTGGTTTATGT+TGG | - | chr4_3:64997971-64997990 | None:intergenic | 30.0% |
| AACATAAACCAAACTAGCTA+AGG | + | chr4_3:64997970-64997989 | Msa0655970:intron | 30.0% | |
| TTGGGACAAGATTATTTACT+AGG | - | chr4_3:64998074-64998093 | None:intergenic | 30.0% | |
| ACAAATAAAGGAACTTCTGT+AGG | + | chr4_3:64998273-64998292 | Msa0655970:intron | 30.0% | |
| ACGAATATTCTGATATTTCC+AGG | - | chr4_3:64998339-64998358 | None:intergenic | 30.0% | |
| !! | TTGAAGTATTTTTCCCCTTT+TGG | + | chr4_3:64998367-64998386 | Msa0655970:intron | 30.0% |
| ! | CTAGTTCTTTCAACTTTAAG+AGG | - | chr4_3:64998599-64998618 | None:intergenic | 30.0% |
| CTCTTAAAGTTGAAAGAACT+AGG | + | chr4_3:64998597-64998616 | Msa0655970:CDS | 30.0% | |
| TCAAATTTAACCTACTGGAA+TGG | - | chr4_3:64998663-64998682 | None:intergenic | 30.0% | |
| CCAAATCAAATTTAACCTAC+TGG | - | chr4_3:64998668-64998687 | None:intergenic | 30.0% | |
| CCAGTAGGTTAAATTTGATT+TGG | + | chr4_3:64998665-64998684 | Msa0655970:intron | 30.0% | |
| !! | ATATGATTTTAGGGACCAAA+AGG | - | chr4_3:64998770-64998789 | None:intergenic | 30.0% |
| CTCAATCTACATCTAAATCA+GGG | - | chr4_3:64998853-64998872 | None:intergenic | 30.0% | |
| TCTCAATCTACATCTAAATC+AGG | - | chr4_3:64998854-64998873 | None:intergenic | 30.0% | |
| !! | AATATTTGTTGCTTTAGCGT+TGG | + | chr4_3:64998900-64998919 | Msa0655970:CDS | 30.0% |
| !! | AATACAGTAATAAGAGCATC+AGG | - | chr4_3:64998940-64998959 | None:intergenic | 30.0% |
| ! | TTTTTATCCTCCCTCAATTT+GGG | - | chr4_3:64998964-64998983 | None:intergenic | 30.0% |
| !!! | TTTTTTATCCTCCCTCAATT+TGG | - | chr4_3:64998965-64998984 | None:intergenic | 30.0% |
| AGGGAGGATAAAAAATATCA+AGG | + | chr4_3:64998970-64998989 | Msa0655970:CDS | 30.0% | |
| TAGATGCCATATCAACTAAA+TGG | + | chr4_3:64999041-64999060 | Msa0655970:intron | 30.0% | |
| AGATGCCATATCAACTAAAT+GGG | + | chr4_3:64999042-64999061 | Msa0655970:intron | 30.0% | |
| ! | GTTGTACTTATCCTTTTGAA+AGG | - | chr4_3:64999103-64999122 | None:intergenic | 30.0% |
| ACAAAACATAATGGTGAAGA+TGG | - | chr4_3:64999348-64999367 | None:intergenic | 30.0% | |
| CAAAATACCTTCTAAACACT+TGG | - | chr4_3:64999794-64999813 | None:intergenic | 30.0% | |
| ATTCTTTATTGGATATGAGC+AGG | + | chr4_3:65000076-65000095 | Msa0655970:intron | 30.0% | |
| AAATCCAAAGATTCCATGTT+GGG | - | chr4_3:65000511-65000530 | None:intergenic | 30.0% | |
| TCGTAATAAAGTGCATAATG+CGG | + | chr4_3:65000668-65000687 | Msa0655970:three_prime_UTR | 30.0% | |
| ! | CTTCATTTGTTCCCTTTTAA+TGG | + | chr4_3:65001031-65001050 | Msa0655970:three_prime_UTR | 30.0% |
| ! | CAAGTGTTGTTCCATTAAAA+GGG | - | chr4_3:65001045-65001064 | None:intergenic | 30.0% |
| ! | ACAAGTGTTGTTCCATTAAA+AGG | - | chr4_3:65001046-65001065 | None:intergenic | 30.0% |
| ATTTGACCTCACTATCAACA+CGG | - | chr4_3:64995852-64995871 | None:intergenic | 35.0% | |
| ! | CTTACGAAGAGTTGACTTAT+AGG | - | chr4_3:64995875-64995894 | None:intergenic | 35.0% |
| CAGAAAAAACGAAGGTGAAA+GGG | - | chr4_3:64995908-64995927 | None:intergenic | 35.0% | |
| ACAGAAAAAACGAAGGTGAA+AGG | - | chr4_3:64995909-64995928 | None:intergenic | 35.0% | |
| TTCATCCATGATTGAAAAGG+GGG | - | chr4_3:64995984-64996003 | None:intergenic | 35.0% | |
| CATAAGAAGAAGGAAGCTAA+CGG | + | chr4_3:64996103-64996122 | Msa0655970:CDS | 35.0% | |
| GAAGAAGGTTAAGAAACCAA+AGG | + | chr4_3:64996363-64996382 | Msa0655970:CDS | 35.0% | |
| TTTCTCGTTGATATATCGGT+AGG | + | chr4_3:64996451-64996470 | Msa0655970:intron | 35.0% | |
| TTCTCGTTGATATATCGGTA+GGG | + | chr4_3:64996452-64996471 | Msa0655970:intron | 35.0% | |
| TATCGGTAGGGTTATTGAAT+TGG | + | chr4_3:64996464-64996483 | Msa0655970:intron | 35.0% | |
| TGTTGTTATGTGAATTGTGC+TGG | + | chr4_3:64996785-64996804 | Msa0655970:intron | 35.0% | |
| !!! | TATGTTCTGGTGTTTTTGGA+TGG | + | chr4_3:64996833-64996852 | Msa0655970:intron | 35.0% |
| TATCATAAACCCTCATCGTA+TGG | - | chr4_3:64996980-64996999 | None:intergenic | 35.0% | |
| TGCTACTCAAATTTGCAGAA+AGG | - | chr4_3:64997189-64997208 | None:intergenic | 35.0% | |
| TAGCAAAAGTCATTGATCCT+CGG | + | chr4_3:64997204-64997223 | Msa0655970:intron | 35.0% | |
| ! | CCAACAATTTCATTTGAAGC+TGG | - | chr4_3:64997243-64997262 | None:intergenic | 35.0% |
| CCAGCTTCAAATGAAATTGT+TGG | + | chr4_3:64997240-64997259 | Msa0655970:intron | 35.0% | |
| ACATTTCAGTACTGTGGTAT+GGG | - | chr4_3:64997460-64997479 | None:intergenic | 35.0% | |
| AACATTTCAGTACTGTGGTA+TGG | - | chr4_3:64997461-64997480 | None:intergenic | 35.0% | |
| ! | CTGAATCTGTTTCGATGTTT+TGG | + | chr4_3:64997517-64997536 | Msa0655970:intron | 35.0% |
| TATACAAGACATCAGTTGAC+TGG | + | chr4_3:64997701-64997720 | Msa0655970:CDS | 35.0% | |
| !! | GACAGTATTCTTACTGACTT+GGG | + | chr4_3:64997775-64997794 | Msa0655970:CDS | 35.0% |
| GATTCAGGATATGGATTCTT+CGG | - | chr4_3:64998040-64998059 | None:intergenic | 35.0% | |
| TGTCTTTGTGATTCAGGATA+TGG | - | chr4_3:64998049-64998068 | None:intergenic | 35.0% | |
| ATATCCTGAATCACAAAGAC+AGG | + | chr4_3:64998048-64998067 | Msa0655970:intron | 35.0% | |
| ! | CCAGAAATTTTACACCATTG+TGG | - | chr4_3:64998138-64998157 | None:intergenic | 35.0% |
| CCACAATGGTGTAAAATTTC+TGG | + | chr4_3:64998135-64998154 | Msa0655970:intron | 35.0% | |
| ! | CAATGGTGTAAAATTTCTGG+AGG | + | chr4_3:64998138-64998157 | Msa0655970:intron | 35.0% |
| ! | CTTTTCTCACCCTTTTCTAT+TGG | + | chr4_3:64998195-64998214 | Msa0655970:intron | 35.0% |
| ! | AAGTATTTTTCCCCTTTTGG+AGG | + | chr4_3:64998370-64998389 | Msa0655970:intron | 35.0% |
| ! | AGTATTTTTCCCCTTTTGGA+GGG | + | chr4_3:64998371-64998390 | Msa0655970:intron | 35.0% |
| AATCAAATGACCCTCCAAAA+GGG | - | chr4_3:64998384-64998403 | None:intergenic | 35.0% | |
| ATTTGATTCATGTTGCCAAC+CGG | + | chr4_3:64998396-64998415 | Msa0655970:intron | 35.0% | |
| AAGACTTATCTTACTAGGTC+CGG | - | chr4_3:64998418-64998437 | None:intergenic | 35.0% | |
| ACAATGGCAAACAAAGAACA+TGG | - | chr4_3:64998492-64998511 | None:intergenic | 35.0% | |
| CTGAATAATGAAAGTCAAGC+AGG | - | chr4_3:64998561-64998580 | None:intergenic | 35.0% | |
| !! | ATTTGATTTGGAGAGTTGCA+TGG | + | chr4_3:64998677-64998696 | Msa0655970:intron | 35.0% |
| ! | ATTTTGTGACCTTTGCCTTT+TGG | + | chr4_3:64998752-64998771 | Msa0655970:intron | 35.0% |
| !! | ATTGATTTTACATGACCTGC+AGG | + | chr4_3:64998873-64998892 | Msa0655970:intron | 35.0% |
| !! | TAATAAGAGCATCAGGCTTT+CGG | - | chr4_3:64998933-64998952 | None:intergenic | 35.0% |
| TTACTGTATTGCCCAAATTG+AGG | + | chr4_3:64998950-64998969 | Msa0655970:CDS | 35.0% | |
| TACTGTATTGCCCAAATTGA+GGG | + | chr4_3:64998951-64998970 | Msa0655970:CDS | 35.0% | |
| AAAAACTCCCAGTGATTGTA+TGG | + | chr4_3:64998998-64999017 | Msa0655970:CDS | 35.0% | |
| ! | ATGAGCCCATTTAGTTGATA+TGG | - | chr4_3:64999050-64999069 | None:intergenic | 35.0% |
| TTAAGCATTAGCGAGATGAA+GGG | - | chr4_3:64999133-64999152 | None:intergenic | 35.0% | |
| ATTAAGCATTAGCGAGATGA+AGG | - | chr4_3:64999134-64999153 | None:intergenic | 35.0% | |
| !! | TCTCAGTTGGTTTGTATTCT+TGG | + | chr4_3:64999189-64999208 | Msa0655970:CDS | 35.0% |
| ! | TTTTGCTAACCACTATAGGT+AGG | - | chr4_3:64999226-64999245 | None:intergenic | 35.0% |
| TGTTTCATTGCTTTACTTCC+AGG | - | chr4_3:64999669-64999688 | None:intergenic | 35.0% | |
| AGATGAACCAAGTGTTTAGA+AGG | + | chr4_3:64999784-64999803 | Msa0655970:intron | 35.0% | |
| TGAAAAAGCTTTCTGATGAC+TGG | + | chr4_3:65000141-65000160 | Msa0655970:CDS | 35.0% | |
| ! | CCTTTTGCCTAAAGTTCTTT+AGG | - | chr4_3:65000214-65000233 | None:intergenic | 35.0% |
| CCTAAAGAACTTTAGGCAAA+AGG | + | chr4_3:65000211-65000230 | Msa0655970:CDS | 35.0% | |
| TTAAATCAGTCCATGTCAAG+GGG | - | chr4_3:65000305-65000324 | None:intergenic | 35.0% | |
| GTTAAATCAGTCCATGTCAA+GGG | - | chr4_3:65000306-65000325 | None:intergenic | 35.0% | |
| AGTTAAATCAGTCCATGTCA+AGG | - | chr4_3:65000307-65000326 | None:intergenic | 35.0% | |
| !! | GAATGAGAAAGCATTGACAA+CGG | + | chr4_3:65000339-65000358 | Msa0655970:intron | 35.0% |
| AATCCAAAGATTCCATGTTG+GGG | - | chr4_3:65000510-65000529 | None:intergenic | 35.0% | |
| GAAATCCAAAGATTCCATGT+TGG | - | chr4_3:65000512-65000531 | None:intergenic | 35.0% | |
| TCGAGAATATTGTGCATTAC+CGG | + | chr4_3:65000572-65000591 | Msa0655970:three_prime_UTR | 35.0% | |
| GCATTATGCACTTTATTACG+AGG | - | chr4_3:65000669-65000688 | None:intergenic | 35.0% | |
| TGAAGAACCGAGAAAAGATA+GGG | - | chr4_3:65001016-65001035 | None:intergenic | 35.0% | |
| ATGAAGAACCGAGAAAAGAT+AGG | - | chr4_3:65001017-65001036 | None:intergenic | 35.0% | |
| TCATTTGGTCGATAAAGATC+CGG | + | chr4_3:65001074-65001093 | Msa0655970:three_prime_UTR | 35.0% | |
| ! | GTTTTCTGTATTACGTTGAC+AGG | + | chr4_3:65001132-65001151 | Msa0655970:three_prime_UTR | 35.0% |
| !! | GTAATTCCGTGTTGATAGTG+AGG | + | chr4_3:64995843-64995862 | Msa0655970:five_prime_UTR | 40.0% |
| GGTGAGAAAGTGATTGAAAG+AGG | - | chr4_3:64995963-64995982 | None:intergenic | 40.0% | |
| GTGAGATGAGGAGTTAGATT+CGG | - | chr4_3:64996041-64996060 | None:intergenic | 40.0% | |
| GAATCTAACTCCTCATCTCA+CGG | + | chr4_3:64996040-64996059 | Msa0655970:CDS | 40.0% | |
| !! | GTTGAAGGTGAGTTTGTTAC+CGG | - | chr4_3:64996140-64996159 | None:intergenic | 40.0% |
| GGTAACAAACTCACCTTCAA+CGG | + | chr4_3:64996139-64996158 | Msa0655970:CDS | 40.0% | |
| TCGGAGAAGGAAAATTCTTG+AGG | + | chr4_3:64996204-64996223 | Msa0655970:CDS | 40.0% | |
| ! | AAGACGATGATGATGTGGAT+CGG | + | chr4_3:64996311-64996330 | Msa0655970:CDS | 40.0% |
| AAAAGCTGAAGAGGTGAAGA+AGG | + | chr4_3:64996348-64996367 | Msa0655970:CDS | 40.0% | |
| ACCAAAGGTGAAGAAACCTA+AGG | + | chr4_3:64996378-64996397 | Msa0655970:CDS | 40.0% | |
| ACCTTAGGTTTCTTCACCTT+TGG | - | chr4_3:64996382-64996401 | None:intergenic | 40.0% | |
| ATGAGGAGATACAGATGATG+CGG | + | chr4_3:64996610-64996629 | Msa0655970:CDS | 40.0% | |
| !! | ATGCGGTTTGCGGATTATTT+TGG | + | chr4_3:64996627-64996646 | Msa0655970:CDS | 40.0% |
| TTCCTTGGGTGAAATTGTTC+AGG | + | chr4_3:64996682-64996701 | Msa0655970:CDS | 40.0% | |
| TCCTTGGGTGAAATTGTTCA+GGG | + | chr4_3:64996683-64996702 | Msa0655970:CDS | 40.0% | |
| ACATCAACAATCTTAGCCAC+AGG | - | chr4_3:64996714-64996733 | None:intergenic | 40.0% | |
| TGGAGTTTCACAATGCAAAG+AGG | - | chr4_3:64996960-64996979 | None:intergenic | 40.0% | |
| TTGTGAAACTCCATACGATG+AGG | + | chr4_3:64996967-64996986 | Msa0655970:intron | 40.0% | |
| TGTGAAACTCCATACGATGA+GGG | + | chr4_3:64996968-64996987 | Msa0655970:intron | 40.0% | |
| AAAGTCATTGATCCTCGGAA+AGG | + | chr4_3:64997209-64997228 | Msa0655970:intron | 40.0% | |
| GTCTCAGATATGTGAGAAAG+TGG | - | chr4_3:64997679-64997698 | None:intergenic | 40.0% | |
| CACTTAGTTCCTTTCTGCTT+TGG | + | chr4_3:64997746-64997765 | Msa0655970:CDS | 40.0% | |
| ! | TTCCTTTCTGCTTTGGTCTT+TGG | + | chr4_3:64997753-64997772 | Msa0655970:CDS | 40.0% |
| ! | GGACAGTATTCTTACTGACT+TGG | + | chr4_3:64997774-64997793 | Msa0655970:CDS | 40.0% |
| !! | TACTTGTTGCACAGCCTTTT+TGG | - | chr4_3:64997827-64997846 | None:intergenic | 40.0% |
| TCTTTGTCATGAAACTGCTG+TGG | + | chr4_3:64997879-64997898 | Msa0655970:intron | 40.0% | |
| !! | TTGGTGGCTGGTGTTATTAT+TGG | - | chr4_3:64997952-64997971 | None:intergenic | 40.0% |
| ! | GCTAGTTTGGTTTATGTTGG+TGG | - | chr4_3:64997968-64997987 | None:intergenic | 40.0% |
| TTGTTCTGCCTTAGCTAGTT+TGG | - | chr4_3:64997981-64998000 | None:intergenic | 40.0% | |
| ACTAGCTAAGGCAGAACAAT+AGG | + | chr4_3:64997982-64998001 | Msa0655970:intron | 40.0% | |
| ! | TGGTGTAAAATTTCTGGAGG+AGG | + | chr4_3:64998141-64998160 | Msa0655970:intron | 40.0% |
| ! | TCATGAGTGCTTTTATGACC+TGG | + | chr4_3:64998318-64998337 | Msa0655970:intron | 40.0% |
| ATCAAATGACCCTCCAAAAG+GGG | - | chr4_3:64998383-64998402 | None:intergenic | 40.0% | |
| GAATCAAATGACCCTCCAAA+AGG | - | chr4_3:64998385-64998404 | None:intergenic | 40.0% | |
| GGACCTAGTAAGATAAGTCT+TGG | + | chr4_3:64998417-64998436 | Msa0655970:intron | 40.0% | |
| CCACCAAGACTTATCTTACT+AGG | - | chr4_3:64998423-64998442 | None:intergenic | 40.0% | |
| CCTAGTAAGATAAGTCTTGG+TGG | + | chr4_3:64998420-64998439 | Msa0655970:intron | 40.0% | |
| ! | GTGGTTGTTGTTAGTTGTGA+CGG | + | chr4_3:64998439-64998458 | Msa0655970:intron | 40.0% |
| ! | TGACGGCATTTTGTGACTTT+GGG | + | chr4_3:64998456-64998475 | Msa0655970:intron | 40.0% |
| CAACTATTCGGAACTACCAA+AGG | - | chr4_3:64998524-64998543 | None:intergenic | 40.0% | |
| ! | CTTTGGTAGTTCCGAATAGT+TGG | + | chr4_3:64998522-64998541 | Msa0655970:intron | 40.0% |
| TTAACCTACTGGAATGGAGA+TGG | - | chr4_3:64998657-64998676 | None:intergenic | 40.0% | |
| !! | TTTTAGGGACCAAAAGGCAA+AGG | - | chr4_3:64998764-64998783 | None:intergenic | 40.0% |
| CAACAAATATTGCAACCTGC+AGG | - | chr4_3:64998891-64998910 | None:intergenic | 40.0% | |
| CAACCATCCATACAATCACT+GGG | - | chr4_3:64999008-64999027 | None:intergenic | 40.0% | |
| TAAGCATTAGCGAGATGAAG+GGG | - | chr4_3:64999132-64999151 | None:intergenic | 40.0% | |
| !! | TTGGTTTGTATTCTTGGTCG+CGG | + | chr4_3:64999195-64999214 | Msa0655970:CDS | 40.0% |
| !! | CCACTTTTGCTAACCACTAT+AGG | - | chr4_3:64999230-64999249 | None:intergenic | 40.0% |
| CCTATAGTGGTTAGCAAAAG+TGG | + | chr4_3:64999227-64999246 | Msa0655970:CDS | 40.0% | |
| AAAACCAAATCCCTGGATTG+CGG | - | chr4_3:64999257-64999276 | None:intergenic | 40.0% | |
| AACAGCTATGGTACGAAAAG+GGG | - | chr4_3:64999324-64999343 | None:intergenic | 40.0% | |
| CAACAGCTATGGTACGAAAA+GGG | - | chr4_3:64999325-64999344 | None:intergenic | 40.0% | |
| !! | GTTAACGGTGCTGTAAGAAA+AGG | + | chr4_3:64999415-64999434 | Msa0655970:CDS | 40.0% |
| ATCAAAGTTTCCAATGCTGG+AGG | - | chr4_3:64999457-64999476 | None:intergenic | 40.0% | |
| TTTACTCTAGCTGAAGATGG+GGG | - | chr4_3:64999493-64999512 | None:intergenic | 40.0% | |
| CTTTACTCTAGCTGAAGATG+GGG | - | chr4_3:64999494-64999513 | None:intergenic | 40.0% | |
| CCTTTACTCTAGCTGAAGAT+GGG | - | chr4_3:64999495-64999514 | None:intergenic | 40.0% | |
| ACCTTTACTCTAGCTGAAGA+TGG | - | chr4_3:64999496-64999515 | None:intergenic | 40.0% | |
| TCTTCAGCTAGAGTAAAGGT+AGG | + | chr4_3:64999496-64999515 | Msa0655970:intron | 40.0% | |
| ACAGGCTACAGAAAGATTTG+AGG | + | chr4_3:64999602-64999621 | Msa0655970:intron | 40.0% | |
| CTCTCTCAGAATGGGATATA+TGG | - | chr4_3:64999628-64999647 | None:intergenic | 40.0% | |
| ! | CATATATCCCATTCTGAGAG+AGG | + | chr4_3:64999626-64999645 | Msa0655970:CDS | 40.0% |
| AATTTCGCTATCATAGCAGC+AGG | + | chr4_3:64999708-64999727 | Msa0655970:CDS | 40.0% | |
| AAGCAGCTTCTATTGCACTT+TGG | + | chr4_3:64999860-64999879 | Msa0655970:CDS | 40.0% | |
| CACTGAATGCTACAAGCTAT+GGG | + | chr4_3:64999897-64999916 | Msa0655970:CDS | 40.0% | |
| GGGAGATCCTAAAGAACTTT+AGG | + | chr4_3:65000204-65000223 | Msa0655970:CDS | 40.0% | |
| TCTATCCGTCTATTGCATCT+AGG | + | chr4_3:65000266-65000285 | Msa0655970:intron | 40.0% | |
| GTGATCCTAGATGCAATAGA+CGG | - | chr4_3:65000274-65000293 | None:intergenic | 40.0% | |
| ACTTACAAATCCCCTTGACA+TGG | + | chr4_3:65000292-65000311 | Msa0655970:intron | 40.0% | |
| ! | TCAAAAATGACTTGCACCCA+TGG | - | chr4_3:65000444-65000463 | None:intergenic | 40.0% |
| !!! | TGTTGTTTTCTACCCCAACA+TGG | + | chr4_3:65000495-65000514 | Msa0655970:CDS | 40.0% |
| ATTCTCGAATGCTCAGAACT+GGG | - | chr4_3:65000560-65000579 | None:intergenic | 40.0% | |
| TATTCTCGAATGCTCAGAAC+TGG | - | chr4_3:65000561-65000580 | None:intergenic | 40.0% | |
| TATTTGATGCAACCAACTGC+CGG | - | chr4_3:65000594-65000613 | None:intergenic | 40.0% | |
| TCAGCTTACATCAACCACAA+TGG | + | chr4_3:65000626-65000645 | Msa0655970:three_prime_UTR | 40.0% | |
| CAGCTTACATCAACCACAAT+GGG | + | chr4_3:65000627-65000646 | Msa0655970:three_prime_UTR | 40.0% | |
| GCACTTTATTACGAGGCAAT+TGG | - | chr4_3:65000662-65000681 | None:intergenic | 40.0% | |
| CAGATGACACAGAATAGTTG+AGG | + | chr4_3:65000719-65000738 | Msa0655970:three_prime_UTR | 40.0% | |
| GTTGAGGTCAATCTACTTTG+AGG | + | chr4_3:65000735-65000754 | Msa0655970:three_prime_UTR | 40.0% | |
| ! | TCCTTTCCCCTATCTTTTCT+CGG | + | chr4_3:65001006-65001025 | Msa0655970:three_prime_UTR | 40.0% |
| GAAGAACCGAGAAAAGATAG+GGG | - | chr4_3:65001015-65001034 | None:intergenic | 40.0% | |
| ! | CACTTGTTGAGCTTGTCATT+TGG | + | chr4_3:65001059-65001078 | Msa0655970:three_prime_UTR | 40.0% |
| TCGATAAAGATCCGGAATTC+AGG | + | chr4_3:65001082-65001101 | Msa0655970:three_prime_UTR | 40.0% | |
| TCACTCAGTATCCTGAATTC+CGG | - | chr4_3:65001096-65001115 | None:intergenic | 40.0% | |
| ! | TCTCACCCCCTTTTCAATCA+TGG | + | chr4_3:64995976-64995995 | Msa0655970:exon | 45.0% |
| AGATGAGGAGTTAGATTCGG+CGG | - | chr4_3:64996038-64996057 | None:intergenic | 45.0% | |
| CTTCTTATGCTTCTTCGCGT+AGG | - | chr4_3:64996092-64996111 | None:intergenic | 45.0% | |
| ! | CGCGAAGAAGCATAAGAAGA+AGG | + | chr4_3:64996093-64996112 | Msa0655970:CDS | 45.0% |
| ! | CAAGTCGCTTGAGTTGCATT+CGG | + | chr4_3:64996177-64996196 | Msa0655970:CDS | 45.0% |
| ! | TTGAGTTGCATTCGGAGGAT+CGG | + | chr4_3:64996185-64996204 | Msa0655970:CDS | 45.0% |
| GAAGGAAAATTCTTGAGGCG+AGG | + | chr4_3:64996209-64996228 | Msa0655970:CDS | 45.0% | |
| ! | CGATGAAGACGATGATGATG+TGG | + | chr4_3:64996306-64996325 | Msa0655970:CDS | 45.0% |
| ! | ATGATGATGTGGATCGGTCA+GGG | + | chr4_3:64996317-64996336 | Msa0655970:CDS | 45.0% |
| GGAGAATGGAAAAGCTGAAG+AGG | + | chr4_3:64996339-64996358 | Msa0655970:CDS | 45.0% | |
| GGTGAAGAAACCTAAGGTGA+CGG | + | chr4_3:64996384-64996403 | Msa0655970:CDS | 45.0% | |
| GAAGATTGATGCAGCTGATC+TGG | + | chr4_3:64996423-64996442 | Msa0655970:CDS | 45.0% | |
| GATACAGATGATGCGGTTTG+CGG | + | chr4_3:64996617-64996636 | Msa0655970:CDS | 45.0% | |
| TCCCTGAACAATTTCACCCA+AGG | - | chr4_3:64996687-64996706 | None:intergenic | 45.0% | |
| CAGTTGACTGGATCAATCGT+CGG | + | chr4_3:64997713-64997732 | Msa0655970:CDS | 45.0% | |
| AGAAAGGAACTAAGTGCCTC+GGG | - | chr4_3:64997742-64997761 | None:intergenic | 45.0% | |
| CAGAAAGGAACTAAGTGCCT+CGG | - | chr4_3:64997743-64997762 | None:intergenic | 45.0% | |
| GTCCAAAGACCAAAGCAGAA+AGG | - | chr4_3:64997758-64997777 | None:intergenic | 45.0% | |
| TGTGACCAAGGGTTCCAAAA+AGG | + | chr4_3:64997810-64997829 | Msa0655970:CDS | 45.0% | |
| !! | GTTTGGTTTATGTTGGTGGC+TGG | - | chr4_3:64997964-64997983 | None:intergenic | 45.0% |
| TGTTCACTATTAAGGGCCAG+TGG | + | chr4_3:64998011-64998030 | Msa0655970:intron | 45.0% | |
| ATGGATTCTTCGGATTCCAC+TGG | - | chr4_3:64998030-64998049 | None:intergenic | 45.0% | |
| TAGGCCTGTCTTTGTGATTC+AGG | - | chr4_3:64998055-64998074 | None:intergenic | 45.0% | |
| ! | GGAACTTCTGTAGGTGCTAT+CGG | + | chr4_3:64998282-64998301 | Msa0655970:intron | 45.0% |
| ! | GAACTTCTGTAGGTGCTATC+GGG | + | chr4_3:64998283-64998302 | Msa0655970:intron | 45.0% |
| CTTATCTTACTAGGTCCGGT+TGG | - | chr4_3:64998414-64998433 | None:intergenic | 45.0% | |
| ! | GTGACGGCATTTTGTGACTT+TGG | + | chr4_3:64998455-64998474 | Msa0655970:intron | 45.0% |
| ! | GACGGCATTTTGTGACTTTG+GGG | + | chr4_3:64998457-64998476 | Msa0655970:intron | 45.0% |
| ! | ACGGCATTTTGTGACTTTGG+GGG | + | chr4_3:64998458-64998477 | Msa0655970:intron | 45.0% |
| CCAAAGGTGGACAAAGACAA+TGG | - | chr4_3:64998508-64998527 | None:intergenic | 45.0% | |
| CCATTGTCTTTGTCCACCTT+TGG | + | chr4_3:64998505-64998524 | Msa0655970:intron | 45.0% | |
| CTATTCGGAACTACCAAAGG+TGG | - | chr4_3:64998521-64998540 | None:intergenic | 45.0% | |
| GTTTCCATCTCCATTCCAGT+AGG | + | chr4_3:64998650-64998669 | Msa0655970:intron | 45.0% | |
| TGTATTGCCCAAATTGAGGG+AGG | + | chr4_3:64998954-64998973 | Msa0655970:CDS | 45.0% | |
| ACTCCCAGTGATTGTATGGA+TGG | + | chr4_3:64999002-64999021 | Msa0655970:CDS | 45.0% | |
| GCAACCATCCATACAATCAC+TGG | - | chr4_3:64999009-64999028 | None:intergenic | 45.0% | |
| GATTGTATGGATGGTTGCTC+AGG | + | chr4_3:64999011-64999030 | Msa0655970:CDS | 45.0% | |
| ATCTATGTGCAGGCTTCAGT+AGG | + | chr4_3:64999161-64999180 | Msa0655970:intron | 45.0% | |
| TCAGTAGGAGATCTCTCAGT+TGG | + | chr4_3:64999176-64999195 | Msa0655970:CDS | 45.0% | |
| AAACCAAATCCCTGGATTGC+GGG | - | chr4_3:64999256-64999275 | None:intergenic | 45.0% | |
| AAGCTGCAAAACCAAATCCC+TGG | - | chr4_3:64999264-64999283 | None:intergenic | 45.0% | |
| !!! | GGATTTGGTTTTGCAGCTTG+TGG | + | chr4_3:64999265-64999284 | Msa0655970:CDS | 45.0% |
| GCAACAGCTATGGTACGAAA+AGG | - | chr4_3:64999326-64999345 | None:intergenic | 45.0% | |
| ! | TTTTGTCCACCCCTAAAGCA+CGG | + | chr4_3:64999383-64999402 | Msa0655970:CDS | 45.0% |
| ! | ATTGATTCCTCCTCCAGCAT+TGG | + | chr4_3:64999444-64999463 | Msa0655970:CDS | 45.0% |
| AAAGTTTCCAATGCTGGAGG+AGG | - | chr4_3:64999454-64999473 | None:intergenic | 45.0% | |
| CGGATCAAAGTTTCCAATGC+TGG | - | chr4_3:64999460-64999479 | None:intergenic | 45.0% | |
| AAGATGGGGGGAAAGTAACA+CGG | - | chr4_3:64999480-64999499 | None:intergenic | 45.0% | |
| TTACTCTAGCTGAAGATGGG+GGG | - | chr4_3:64999492-64999511 | None:intergenic | 45.0% | |
| CCCATCTTCAGCTAGAGTAA+AGG | + | chr4_3:64999492-64999511 | Msa0655970:CDS | 45.0% | |
| AGTAAAGGTAGGTGTTCAGC+TGG | + | chr4_3:64999507-64999526 | Msa0655970:intron | 45.0% | |
| !! | GGCTCTGGTGTTTTTGCATT+TGG | + | chr4_3:64999528-64999547 | Msa0655970:intron | 45.0% |
| ! | ATATCCCATTCTGAGAGAGG+TGG | + | chr4_3:64999629-64999648 | Msa0655970:CDS | 45.0% |
| GCTTGTAGCATTCAGTGCTT+TGG | - | chr4_3:64999894-64999913 | None:intergenic | 45.0% | |
| GCACTGAATGCTACAAGCTA+TGG | + | chr4_3:64999896-64999915 | Msa0655970:CDS | 45.0% | |
| TGAGCAGGAGAAAGTTTACC+AGG | + | chr4_3:65000091-65000110 | Msa0655970:intron | 45.0% | |
| !! | TTCTTTAGGATCTCCCTGAG+TGG | - | chr4_3:65000200-65000219 | None:intergenic | 45.0% |
| GAATATATCGCGCAGACAGA+TGG | - | chr4_3:65000248-65000267 | None:intergenic | 45.0% | |
| ATCTCAGGAAGAGTTTCACG+AGG | + | chr4_3:65000418-65000437 | Msa0655970:CDS | 45.0% | |
| CTACCCCAACATGGAATCTT+TGG | + | chr4_3:65000504-65000523 | Msa0655970:CDS | 45.0% | |
| TATTGTGCATTACCGGCAGT+TGG | + | chr4_3:65000579-65000598 | Msa0655970:three_prime_UTR | 45.0% | |
| !! | TTGGTTTGCTGAACCCATTG+TGG | - | chr4_3:65000643-65000662 | None:intergenic | 45.0% |
| ATGCCTTTACATCACCATGC+TGG | + | chr4_3:65000836-65000855 | Msa0655970:three_prime_UTR | 45.0% | |
| ! | TTGCCAGCATGGTGATGTAA+AGG | - | chr4_3:65000842-65000861 | None:intergenic | 45.0% |
| ! | TCATTGGCATTTTGCCAGCA+TGG | - | chr4_3:65000853-65000872 | None:intergenic | 45.0% |
| ATGCTGGCAAAATGCCAATG+AGG | + | chr4_3:65000852-65000871 | Msa0655970:three_prime_UTR | 45.0% | |
| TACAGGTGTAGTTGCCTCAT+TGG | - | chr4_3:65000869-65000888 | None:intergenic | 45.0% | |
| AAAGATAGGGGAAAGGACAC+AGG | - | chr4_3:65001003-65001022 | None:intergenic | 45.0% | |
| ACCGAGAAAAGATAGGGGAA+AGG | - | chr4_3:65001010-65001029 | None:intergenic | 45.0% | |
| GATGAAAACTACACCCCCTC+CGG | + | chr4_3:64995998-64996017 | Msa0655970:CDS | 50.0% | |
| !! | GGTGAGTTTGTTACCGGTAC+CGG | - | chr4_3:64996134-64996153 | None:intergenic | 50.0% |
| AATTCTTGAGGCGAGGACTG+CGG | + | chr4_3:64996216-64996235 | Msa0655970:CDS | 50.0% | |
| GCGGAGGCTGAATTTGATGA+TGG | + | chr4_3:64996238-64996257 | Msa0655970:CDS | 50.0% | |
| GATCGCTGCTTCGATCTAAC+TGG | - | chr4_3:64996265-64996284 | None:intergenic | 50.0% | |
| ! | GATGATGATGTGGATCGGTC+AGG | + | chr4_3:64996316-64996335 | Msa0655970:CDS | 50.0% |
| ! | TGATGATGTGGATCGGTCAG+GGG | + | chr4_3:64996318-64996337 | Msa0655970:CDS | 50.0% |
| ! | GAAGAAACCTAAGGTGACGG+TGG | + | chr4_3:64996387-64996406 | Msa0655970:CDS | 50.0% |
| GGCATCGTTTGAGCAGAATG+AGG | + | chr4_3:64996593-64996612 | Msa0655970:intron | 50.0% | |
| ATTGTTCAGGGAGTCACCTG+TGG | + | chr4_3:64996695-64996714 | Msa0655970:CDS | 50.0% | |
| TAGCCAGCAAACTGTGACCA+AGG | + | chr4_3:64997798-64997817 | Msa0655970:CDS | 50.0% | |
| AGCCAGCAAACTGTGACCAA+GGG | + | chr4_3:64997799-64997818 | Msa0655970:CDS | 50.0% | |
| AACCCTTGGTCACAGTTTGC+TGG | - | chr4_3:64997804-64997823 | None:intergenic | 50.0% | |
| !!! | CACAGCCTTTTTGGAACCCT+TGG | - | chr4_3:64997818-64997837 | None:intergenic | 50.0% |
| ACCATTGTGGCACGTGTGAA+GGG | - | chr4_3:64998125-64998144 | None:intergenic | 50.0% | |
| TATGGATGGTTGCTCAGGTG+AGG | + | chr4_3:64999016-64999035 | Msa0655970:intron | 50.0% | |
| GCGGAATCTCCTACCTATAG+TGG | + | chr4_3:64999214-64999233 | Msa0655970:CDS | 50.0% | |
| TGGTACGAAAAGGGGTGGAA+AGG | - | chr4_3:64999316-64999335 | None:intergenic | 50.0% | |
| AGCTATGGTACGAAAAGGGG+TGG | - | chr4_3:64999321-64999340 | None:intergenic | 50.0% | |
| GGTGAAGATGGCAACAGCTA+TGG | - | chr4_3:64999336-64999355 | None:intergenic | 50.0% | |
| TTTGTCCACCCCTAAAGCAC+GGG | + | chr4_3:64999384-64999403 | Msa0655970:CDS | 50.0% | |
| CAAAACAGCCCGTGCTTTAG+GGG | - | chr4_3:64999395-64999414 | None:intergenic | 50.0% | |
| CCAAAACAGCCCGTGCTTTA+GGG | - | chr4_3:64999396-64999415 | None:intergenic | 50.0% | |
| ACCAAAACAGCCCGTGCTTT+AGG | - | chr4_3:64999397-64999416 | None:intergenic | 50.0% | |
| !!! | GCACGGGCTGTTTTGGTTAA+CGG | + | chr4_3:64999400-64999419 | Msa0655970:CDS | 50.0% |
| AGAGCCACCTCTCTCAGAAT+GGG | - | chr4_3:64999636-64999655 | None:intergenic | 50.0% | |
| AAGAGCCACCTCTCTCAGAA+TGG | - | chr4_3:64999637-64999656 | None:intergenic | 50.0% | |
| ! | ATTCTGAGAGAGGTGGCTCT+TGG | + | chr4_3:64999636-64999655 | Msa0655970:CDS | 50.0% |
| GCTATCATAGCAGCAGGAGA+AGG | + | chr4_3:64999714-64999733 | Msa0655970:CDS | 50.0% | |
| TCATAGCAGCAGGAGAAGGT+TGG | + | chr4_3:64999718-64999737 | Msa0655970:intron | 50.0% | |
| GCTGCTTCTTTCGATACTCC+AGG | - | chr4_3:64999847-64999866 | None:intergenic | 50.0% | |
| ! | CGCTTGCTACAATGTTCTCC+TGG | - | chr4_3:65000112-65000131 | None:intergenic | 50.0% |
| TGTCTCCTTATGAGCCACTC+AGG | + | chr4_3:65000183-65000202 | Msa0655970:CDS | 50.0% | |
| GTCTCCTTATGAGCCACTCA+GGG | + | chr4_3:65000184-65000203 | Msa0655970:CDS | 50.0% | |
| ATCTCCCTGAGTGGCTCATA+AGG | - | chr4_3:65000191-65000210 | None:intergenic | 50.0% | |
| GAAGAGTTTCACGAGGCCAT+GGG | + | chr4_3:65000425-65000444 | Msa0655970:CDS | 50.0% | |
| TCAGGATACTGAGTGAGCGA+AGG | + | chr4_3:65001100-65001119 | Msa0655970:three_prime_UTR | 50.0% | |
| GGAGTTAGATTCGGCGGTGT+GGG | - | chr4_3:64996032-64996051 | None:intergenic | 55.0% | |
| AGGAGTTAGATTCGGCGGTG+TGG | - | chr4_3:64996033-64996052 | None:intergenic | 55.0% | |
| AGCAGCGTCGTTTCCGTTGA+AGG | - | chr4_3:64996155-64996174 | None:intergenic | 55.0% | |
| ! | GTCGCTTGAGTTGCATTCGG+AGG | + | chr4_3:64996180-64996199 | Msa0655970:CDS | 55.0% |
| TGCATTCGGAGGATCGGAGA+AGG | + | chr4_3:64996191-64996210 | Msa0655970:CDS | 55.0% | |
| ! | GAAACCTAAGGTGACGGTGG+CGG | + | chr4_3:64996390-64996409 | Msa0655970:CDS | 55.0% |
| TCAGCGCTGCTCAGTTTCCT+TGG | + | chr4_3:64996667-64996686 | Msa0655970:CDS | 55.0% | |
| CAGCGCTGCTCAGTTTCCTT+GGG | + | chr4_3:64996668-64996687 | Msa0655970:CDS | 55.0% | |
| ! | CTGGCACGTTTTCCTTTCCG+AGG | - | chr4_3:64997224-64997243 | None:intergenic | 55.0% |
| ACCCTTCACACGTGCCACAA+TGG | + | chr4_3:64998121-64998140 | Msa0655970:intron | 55.0% | |
| CACCATTGTGGCACGTGTGA+AGG | - | chr4_3:64998126-64998145 | None:intergenic | 55.0% | |
| AAAGTGGCAACCCGCAATCC+AGG | + | chr4_3:64999243-64999262 | Msa0655970:CDS | 55.0% | |
| AAGTGGCAACCCGCAATCCA+GGG | + | chr4_3:64999244-64999263 | Msa0655970:CDS | 55.0% | |
| CAACCCGCAATCCAGGGATT+TGG | + | chr4_3:64999250-64999269 | Msa0655970:CDS | 55.0% | |
| !! | CCCTAAAGCACGGGCTGTTT+TGG | + | chr4_3:64999393-64999412 | Msa0655970:CDS | 55.0% |
| GGAAGAGTTTCACGAGGCCA+TGG | + | chr4_3:65000424-65000443 | Msa0655970:CDS | 55.0% | |
| ! | GACCTTTACCGTGCTTGCTG+TGG | + | chr4_3:65000462-65000481 | Msa0655970:CDS | 55.0% |
| AGCCACAGCAAGCACGGTAA+AGG | - | chr4_3:65000467-65000486 | None:intergenic | 55.0% | |
| ACCAACAGCCACAGCAAGCA+CGG | - | chr4_3:65000473-65000492 | None:intergenic | 55.0% | |
| TGTGGGAGATGGATCCGGAG+GGG | - | chr4_3:64996015-64996034 | None:intergenic | 60.0% | |
| GTGTGGGAGATGGATCCGGA+GGG | - | chr4_3:64996016-64996035 | None:intergenic | 60.0% | |
| AGATTCGGCGGTGTGGGAGA+TGG | - | chr4_3:64996026-64996045 | None:intergenic | 60.0% | |
| !! | TCATCTCACGGCGCCGATCA+CGG | + | chr4_3:64996052-64996071 | Msa0655970:CDS | 60.0% |
| GACCTTCTGCCAGCCGTGAT+CGG | - | chr4_3:64996068-64996087 | None:intergenic | 60.0% | |
| AAGGAAGCTAACGGCGTCGC+CGG | + | chr4_3:64996112-64996131 | Msa0655970:CDS | 60.0% | |
| GTGGATCGGTCAGGGGAGAA+TGG | + | chr4_3:64996325-64996344 | Msa0655970:CDS | 60.0% | |
| GATCAATCGTCGGTCTCCCG+AGG | + | chr4_3:64997723-64997742 | Msa0655970:CDS | 60.0% | |
| !! | AACAGCCCGTGCTTTAGGGG+TGG | - | chr4_3:64999392-64999411 | None:intergenic | 60.0% |
| ! | GGTAGGTGTTCAGCTGGCTC+TGG | + | chr4_3:64999513-64999532 | Msa0655970:intron | 60.0% |
| CTGAGAGAGGTGGCTCTTGG+CGG | + | chr4_3:64999639-64999658 | Msa0655970:CDS | 60.0% | |
| !! | ACCGTGCTTGCTGTGGCTGT+TGG | + | chr4_3:65000469-65000488 | Msa0655970:CDS | 60.0% |
| GTGGGAGATGGATCCGGAGG+GGG | - | chr4_3:64996014-64996033 | None:intergenic | 65.0% | |
| GGTGTGGGAGATGGATCCGG+AGG | - | chr4_3:64996017-64996036 | None:intergenic | 65.0% | |
| GGCGGTGTGGGAGATGGATC+CGG | - | chr4_3:64996020-64996039 | None:intergenic | 65.0% | |
| GTGATCGGCGCCGTGAGATG+AGG | - | chr4_3:64996053-64996072 | None:intergenic | 65.0% | |
| TCTTGAGGCGAGGACTGCGG+CGG | + | chr4_3:64996219-64996238 | Msa0655970:CDS | 65.0% | |
| GCTTCCGCCACCGTCACCTT+AGG | - | chr4_3:64996397-64996416 | None:intergenic | 65.0% | |
| GTGGCTCTTGGCGGTTCTCC+TGG | + | chr4_3:64999648-64999667 | Msa0655970:CDS | 65.0% | |
| CGCCGATCACGGCTGGCAGA+AGG | + | chr4_3:64996063-64996082 | Msa0655970:CDS | 70.0% | |
| GCTAACGGCGTCGCCGGTAC+CGG | + | chr4_3:64996118-64996137 | Msa0655970:CDS | 70.0% | |
| !! | CTCACGGCGCCGATCACGGC+TGG | + | chr4_3:64996056-64996075 | Msa0655970:CDS | 75.0% |
| TGAGGCGAGGACTGCGGCGG+AGG | + | chr4_3:64996222-64996241 | Msa0655970:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 64995842 | 65001200 | 64995842 | ID=Msa0655970;Name=Msa0655970 |
| chr4_3 | mRNA | 64995842 | 65001200 | 64995842 | ID=Msa0655970-mRNA-1;Parent=Msa0655970;Name=Msa0655970-mRNA-1;_AED=0.02;_eAED=0.02;_QI=153|0.8|0.90|0.90|1|1|11|633|616 |
| chr4_3 | exon | 64995842 | 64996468 | 64995842 | ID=Msa0655970-mRNA-1:exon:18404;Parent=Msa0655970-mRNA-1 |
| chr4_3 | exon | 64996594 | 64996731 | 64996594 | ID=Msa0655970-mRNA-1:exon:18405;Parent=Msa0655970-mRNA-1 |
| chr4_3 | exon | 64997673 | 64997861 | 64997673 | ID=Msa0655970-mRNA-1:exon:18406;Parent=Msa0655970-mRNA-1 |
| chr4_3 | exon | 64998581 | 64998667 | 64998581 | ID=Msa0655970-mRNA-1:exon:18407;Parent=Msa0655970-mRNA-1 |
| chr4_3 | exon | 64998895 | 64999032 | 64998895 | ID=Msa0655970-mRNA-1:exon:18408;Parent=Msa0655970-mRNA-1 |
| chr4_3 | exon | 64999173 | 64999291 | 64999173 | ID=Msa0655970-mRNA-1:exon:18409;Parent=Msa0655970-mRNA-1 |
| chr4_3 | exon | 64999381 | 64999513 | 64999381 | ID=Msa0655970-mRNA-1:exon:18410;Parent=Msa0655970-mRNA-1 |
| chr4_3 | exon | 64999606 | 64999735 | 64999606 | ID=Msa0655970-mRNA-1:exon:18411;Parent=Msa0655970-mRNA-1 |
| chr4_3 | exon | 64999839 | 64999918 | 64999839 | ID=Msa0655970-mRNA-1:exon:18412;Parent=Msa0655970-mRNA-1 |
| chr4_3 | exon | 65000098 | 65000232 | 65000098 | ID=Msa0655970-mRNA-1:exon:18413;Parent=Msa0655970-mRNA-1 |
| chr4_3 | exon | 65000340 | 65001200 | 65000340 | ID=Msa0655970-mRNA-1:exon:18414;Parent=Msa0655970-mRNA-1 |
| chr4_3 | five_prime_UTR | 64995842 | 64995994 | 64995842 | ID=Msa0655970-mRNA-1:five_prime_utr;Parent=Msa0655970-mRNA-1 |
| chr4_3 | CDS | 64995995 | 64996468 | 64995995 | ID=Msa0655970-mRNA-1:cds;Parent=Msa0655970-mRNA-1 |
| chr4_3 | CDS | 64996594 | 64996731 | 64996594 | ID=Msa0655970-mRNA-1:cds;Parent=Msa0655970-mRNA-1 |
| chr4_3 | CDS | 64997673 | 64997861 | 64997673 | ID=Msa0655970-mRNA-1:cds;Parent=Msa0655970-mRNA-1 |
| chr4_3 | CDS | 64998581 | 64998667 | 64998581 | ID=Msa0655970-mRNA-1:cds;Parent=Msa0655970-mRNA-1 |
| chr4_3 | CDS | 64998895 | 64999032 | 64998895 | ID=Msa0655970-mRNA-1:cds;Parent=Msa0655970-mRNA-1 |
| chr4_3 | CDS | 64999173 | 64999291 | 64999173 | ID=Msa0655970-mRNA-1:cds;Parent=Msa0655970-mRNA-1 |
| chr4_3 | CDS | 64999381 | 64999513 | 64999381 | ID=Msa0655970-mRNA-1:cds;Parent=Msa0655970-mRNA-1 |
| chr4_3 | CDS | 64999606 | 64999735 | 64999606 | ID=Msa0655970-mRNA-1:cds;Parent=Msa0655970-mRNA-1 |
| chr4_3 | CDS | 64999839 | 64999918 | 64999839 | ID=Msa0655970-mRNA-1:cds;Parent=Msa0655970-mRNA-1 |
| chr4_3 | CDS | 65000098 | 65000232 | 65000098 | ID=Msa0655970-mRNA-1:cds;Parent=Msa0655970-mRNA-1 |
| chr4_3 | CDS | 65000340 | 65000567 | 65000340 | ID=Msa0655970-mRNA-1:cds;Parent=Msa0655970-mRNA-1 |
| chr4_3 | three_prime_UTR | 65000568 | 65001200 | 65000568 | ID=Msa0655970-mRNA-1:three_prime_utr;Parent=Msa0655970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
