AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0154720

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0154720 MtrunA17_Chr1g0165651 98.634 952 12 1 3 954 4 954 0.0 1944
Msa0154720 MtrunA17_Chr7g0257921 34.993 683 373 17 256 928 13 634 4.24e-107 346
Msa0154720 MtrunA17_Chr5g0400101 35.205 463 260 15 472 925 470 901 8.18e-57 213
Msa0154720 MtrunA17_Chr5g0422511 31.306 444 239 12 490 911 330 729 2.78e-40 160
Msa0154720 MtrunA17_Chr7g0228141 28.482 481 258 12 447 905 336 752 1.16e-36 149
Msa0154720 MtrunA17_Chr5g0394941 28.898 481 260 18 469 923 385 809 1.50e-35 145
Msa0154720 MtrunA17_Chr2g0304151 28.810 479 260 17 470 923 387 809 3.16e-35 145
Msa0154720 MtrunA17_Chr8g0343741 25.628 597 290 22 486 950 707 1281 1.98e-30 130
Msa0154720 MtrunA17_Chr2g0334291 28.008 507 234 16 524 922 1578 2061 2.07e-30 130
Msa0154720 MtrunA17_Chr1g0173701 33.203 256 147 7 664 911 111 350 4.35e-27 115
Msa0154720 MtrunA17_Chr5g0433321 33.993 303 167 10 630 919 557 839 3.41e-26 115
Msa0154720 MtrunA17_Chr8g0375181 33.673 294 165 10 630 911 631 906 8.09e-26 115
Msa0154720 MtrunA17_Chr3g0109551 31.293 294 173 9 630 911 614 890 1.50e-25 114
Msa0154720 MtrunA17_Chr3g0109541 31.447 318 186 11 607 911 557 855 2.31e-25 113
Msa0154720 MtrunA17_Chr5g0433371 32.667 300 175 10 630 919 581 863 6.74e-25 112
Msa0154720 MtrunA17_Chr5g0433471 32.237 304 172 10 630 919 579 862 1.86e-24 110
Msa0154720 MtrunA17_Chr5g0433421 32.660 297 164 11 630 911 664 939 1.86e-23 107
Msa0154720 MtrunA17_Chr8g0375151 31.741 293 169 11 630 911 526 798 1.97e-23 107
Msa0154720 MtrunA17_Chr5g0433361 31.864 295 160 13 630 911 559 825 2.29e-21 100
Msa0154720 MtrunA17_Chr3g0094211 28.383 303 189 9 630 921 547 832 1.53e-20 97.8
Msa0154720 MtrunA17_Chr8g0375191 31.126 302 172 12 623 911 551 829 2.30e-20 97.8
Msa0154720 MtrunA17_Chr5g0433511 29.070 258 153 10 630 875 598 837 2.22e-12 71.2
Msa0154720 MtrunA17_Chr5g0433331 36.735 98 58 1 826 919 8 105 1.72e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0154720 AT5G35970.1 73.760 907 217 4 65 953 57 960 0.0 1347
Msa0154720 AT2G03270.1 34.307 685 376 16 256 928 7 629 1.60e-109 352
Msa0154720 AT5G47010.1 35.546 467 253 15 472 925 482 913 7.87e-58 217
Msa0154720 AT4G15570.3 30.508 472 249 17 489 933 337 756 2.12e-39 158
Msa0154720 AT4G15570.1 30.508 472 249 17 489 933 337 756 2.12e-39 158
Msa0154720 AT4G15570.2 30.508 472 249 17 489 933 248 667 3.77e-39 156
Msa0154720 AT4G15570.4 30.508 472 249 17 489 933 248 667 3.77e-39 156
Msa0154720 AT1G08840.1 29.158 463 255 12 473 925 882 1281 3.61e-38 155
Msa0154720 AT1G08840.4 29.158 463 255 12 473 925 914 1313 4.06e-38 155
Msa0154720 AT1G08840.3 29.158 463 255 12 473 925 917 1316 4.07e-38 155
Msa0154720 AT1G08840.2 29.158 463 255 12 473 925 901 1300 4.20e-38 155
Msa0154720 AT1G05460.2 29.333 450 245 16 493 921 412 809 5.12e-32 135
Msa0154720 AT1G05460.1 29.333 450 245 16 493 921 412 809 7.72e-32 134
Msa0154720 AT2G19120.1 32.738 336 189 12 633 952 753 1067 2.45e-30 130
Msa0154720 AT1G16800.3 27.976 504 218 19 525 911 1429 1904 1.55e-27 121
Msa0154720 AT1G16800.2 27.856 499 225 18 525 911 1499 1974 1.84e-27 121
Msa0154720 AT1G16800.1 27.856 499 225 18 525 911 1387 1862 2.05e-27 121
Msa0154720 AT4G30100.2 26.838 544 254 21 496 911 660 1187 9.83e-27 118
Msa0154720 AT4G30100.1 26.838 544 254 21 496 911 660 1187 9.83e-27 118
Msa0154720 AT5G52090.1 27.424 361 240 9 559 911 270 616 1.23e-26 117
Msa0154720 AT5G37150.1 30.743 296 172 10 630 911 503 779 2.55e-25 113
Msa0154720 AT5G37140.1 30.128 312 183 11 630 928 361 650 1.43e-23 107
Msa0154720 AT1G65780.1 32.787 305 180 8 626 919 536 826 2.46e-23 107
Msa0154720 AT1G65810.2 30.952 336 195 12 600 919 497 811 4.75e-23 106
Msa0154720 AT1G65810.1 30.952 336 195 12 600 919 497 811 5.36e-23 106
Msa0154720 AT1G65810.3 30.952 336 195 12 600 919 497 811 8.30e-23 105
Msa0154720 AT5G37030.1 27.174 460 259 19 473 912 198 601 1.17e-22 104
Msa0154720 AT4G05540.1 30.068 296 174 10 630 911 407 683 4.26e-22 102
Msa0154720 AT5G37165.1 26.207 290 194 5 630 911 89 366 6.33e-22 100

Find 209 sgRNAs with CRISPR-Local

Find 335 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTACTTTCTCTAAACTATT+TGG 0.122471 1_4:-19434664 Msa0154720:CDS
GTCGAAACCGATTGAGTTCT+TGG 0.178361 1_4:-19435187 Msa0154720:CDS
GAATCCAATGTTACCTTCTA+TGG 0.206751 1_4:-19431782 Msa0154720:CDS
CTTAAGGAGCTTGCCAATTC+AGG 0.260604 1_4:-19436179 Msa0154720:intron
CCCCTCAAACAATTGCTTAT+AGG 0.261799 1_4:+19431713 None:intergenic
ATACTCATGCATGAAAATTA+TGG 0.288033 1_4:-19431590 Msa0154720:three_prime_UTR
TGCTGAGTTACTTGAAGATT+TGG 0.290589 1_4:-19436435 Msa0154720:CDS
ATGCATAACACTTGCATCTA+TGG 0.290906 1_4:+19431500 None:intergenic
AGAAGAATAGTTTGGTAGAT+TGG 0.291762 1_4:-19434061 Msa0154720:CDS
TCTGTTGTTGCAACTCTATT+CGG 0.305233 1_4:-19434110 Msa0154720:CDS
ATCATTACCAGCATAAATTA+AGG 0.306461 1_4:+19432559 None:intergenic
TGAAGATGATGAAGCTAGTT+TGG 0.307407 1_4:+19436775 None:intergenic
TGAGAAGTTCTGACATGTTT+TGG 0.312836 1_4:+19435289 None:intergenic
CATCGTTTCGCCTGCAATAT+AGG 0.322895 1_4:+19433417 None:intergenic
CAATGCAGCTGTTGATAATA+TGG 0.324332 1_4:-19433838 Msa0154720:CDS
CTAGCTTCATCATCTTCATT+TGG 0.327143 1_4:-19436770 Msa0154720:CDS
GGGAAAGTCGCTAAAGAAAA+AGG 0.330531 1_4:-19433592 Msa0154720:CDS
AAGTGTTATGCATGATACTA+TGG 0.335856 1_4:-19431490 Msa0154720:three_prime_UTR
CCCTACCAAAGTGTCGAATA+TGG 0.337657 1_4:+19431854 None:intergenic
AAGGCATTAGAAGGTGGTTT+AGG 0.346964 1_4:-19433345 Msa0154720:CDS
CACTCTTTCACCCGGAGAAA+TGG 0.354961 1_4:-19434809 Msa0154720:CDS
GACTGAACTACAATAGCATT+TGG 0.358638 1_4:+19432379 None:intergenic
AGCATTTAGCTTTCGAATCA+TGG 0.361465 1_4:+19433497 None:intergenic
CCAACATCTTTCCATCCAAT+AGG 0.361650 1_4:+19436518 None:intergenic
GTTGCAACAACAGAAATTGA+TGG 0.369280 1_4:+19434119 None:intergenic
TCGGAAGCATCATCTTGTTT+AGG 0.371391 1_4:+19435213 None:intergenic
TATTGAAAGGGATGTTGAAT+TGG 0.371567 1_4:-19435265 Msa0154720:CDS
GTTGAAAAGCTTTCAAATGT+TGG 0.374768 1_4:-19433816 Msa0154720:CDS
CAACATCTTTCCATCCAATA+GGG 0.376611 1_4:+19436519 None:intergenic
ACTTCAGTACCGGCAGCTTC+AGG 0.378086 1_4:+19432307 None:intergenic
AACCCTCCTCCAAAACTATC+TGG 0.381690 1_4:+19431817 None:intergenic
TTGCTGGATTCCTATATTGC+AGG 0.383652 1_4:-19433427 Msa0154720:CDS
GGGATCGGCTGCTCCGGTAT+TGG 0.385776 1_4:+19433518 None:intergenic
TTTGGAGGAGGGTTTGGACT+TGG 0.385868 1_4:-19431808 Msa0154720:CDS
AGAGGAAGAAATCTGATCTA+AGG 0.393500 1_4:-19433683 Msa0154720:CDS
ATAGGAACAGCATTCAAATA+AGG 0.395012 1_4:+19436353 None:intergenic
GAAGAATAGTTTGGTAGATT+GGG 0.397230 1_4:-19434060 Msa0154720:CDS
CACGTAGAACCAGATAGTTT+TGG 0.398663 1_4:-19431826 Msa0154720:CDS
CGCATTTACAATTTCTCCTA+AGG 0.404693 1_4:+19433734 None:intergenic
GGAATAAATATTGTTCGAGT+TGG 0.408855 1_4:-19433795 Msa0154720:CDS
CACATAGCTCTTGCTGAGGC+TGG 0.409605 1_4:+19435154 None:intergenic
AAAACTCCTTGGACACTCTT+AGG 0.412479 1_4:+19435366 None:intergenic
ACAACTGGTGTCATGAGTTC+AGG 0.413264 1_4:+19431447 None:intergenic
AGGCAATTGAACCGTCTTGC+TGG 0.414062 1_4:-19433443 Msa0154720:CDS
ACGTGAGAGTATGAAATCTA+TGG 0.416536 1_4:-19436474 Msa0154720:CDS
GTAAAGGTTTGGTTGAAGAT+TGG 0.417519 1_4:-19436226 Msa0154720:CDS
TTGGGAGCTGTCGGATTCCT+TGG 0.417961 1_4:-19431985 Msa0154720:CDS
TTCCCAACTGTTTCAGAAGT+TGG 0.421180 1_4:+19433610 None:intergenic
ATGGCTTGAGAAGAATAGTT+TGG 0.421263 1_4:-19434069 Msa0154720:CDS
AGTTGAACTTGAGCAACATA+TGG 0.426082 1_4:+19432355 None:intergenic
AGATATGCAGAGTAAAGGTT+TGG 0.428977 1_4:-19436237 Msa0154720:CDS
TTCTGAAATGAAACAAAGAA+TGG 0.429448 1_4:-19436408 Msa0154720:CDS
GTGCGCATTGATCGTATTCA+AGG 0.431412 1_4:-19434634 Msa0154720:CDS
GAATGATGCCATTGCAAGTT+GGG 0.434868 1_4:-19433247 Msa0154720:CDS
TATTATTTGCTTGAGTAAAC+CGG 0.436762 1_4:+19433908 None:intergenic
CAGCAGAGAGCAATTGCGTT+AGG 0.442940 1_4:-19433987 Msa0154720:CDS
CATCTAGATCAGGCTGGAAC+AGG 0.444736 1_4:-19432632 Msa0154720:CDS
GAATAAGAAGAGGCCACTAT+TGG 0.445426 1_4:-19433961 Msa0154720:CDS
CTTCACGTGCATGAGAATAT+AGG 0.445779 1_4:-19436545 Msa0154720:CDS
GCGAAACGATGCATTCTTGT+TGG 0.447574 1_4:-19433405 Msa0154720:CDS
CAAGGAGTTGTGGAAAATCT+AGG 0.450398 1_4:-19434736 Msa0154720:CDS
GATAGAAATCAGTACCTCAT+AGG 0.456201 1_4:+19434594 None:intergenic
CTGGTGTTATTCAAGATTGA+AGG 0.459300 1_4:-19434853 Msa0154720:CDS
ATCCAAGGACCTCCCGGTAC+AGG 0.464985 1_4:-19433936 Msa0154720:CDS
GCCTATAAGCAATTGTTTGA+GGG 0.466799 1_4:-19431714 Msa0154720:three_prime_UTR
GCTCTTGCTGAGGCTGGCTA+TGG 0.468449 1_4:+19435160 None:intergenic
CTTCAAGATATGCAGAGTAA+AGG 0.468784 1_4:-19436242 Msa0154720:CDS
CATATTATCAACAGCTGCAT+TGG 0.469527 1_4:+19433839 None:intergenic
GCATTTCTAAATGTGTTTCA+AGG 0.470340 1_4:+19431735 None:intergenic
TTGCAACACTAATCCATAGA+AGG 0.470626 1_4:+19431769 None:intergenic
TGCCTATAAGCAATTGTTTG+AGG 0.471982 1_4:-19431715 Msa0154720:three_prime_UTR
CCAAATAGTTTAGAGAAAGT+AGG 0.472362 1_4:+19434664 None:intergenic
GAGTTTAATACCTTAACAAA+AGG 0.472809 1_4:+19433153 None:intergenic
TCAGTCTTGGAAGTTGCTTA+AGG 0.472856 1_4:-19436195 Msa0154720:CDS
GATGGCATTTAAATTACAAA+TGG 0.474378 1_4:+19435128 None:intergenic
CATTGATCGTATTCAAGGAT+TGG 0.479648 1_4:-19434629 Msa0154720:CDS
TTCTTGCATGCAAGGAGTTG+TGG 0.480322 1_4:-19434746 Msa0154720:CDS
TGCCTGTACCGGGAGGTCCT+TGG 0.481597 1_4:+19433934 None:intergenic
CATTGCAAGTTGGGCTTCGA+AGG 0.482049 1_4:-19433238 Msa0154720:CDS
CCGTATGGAAGTCTTTCAAT+TGG 0.483134 1_4:-19432665 Msa0154720:CDS
ACAGTAGCATCAAAGTCCTT+AGG 0.484479 1_4:-19433750 Msa0154720:CDS
AGGGATGATTCATTAGCTGC+AGG 0.486808 1_4:-19433639 Msa0154720:CDS
ACTGAACTACAATAGCATTT+GGG 0.487577 1_4:+19432380 None:intergenic
TGAAGTTCTATCTAGTGCTC+AGG 0.488890 1_4:-19433553 Msa0154720:CDS
AAGATCTAAGACAATGTTTG+AGG 0.490016 1_4:-19433659 Msa0154720:CDS
TCTGAAATGAAACAAAGAAT+GGG 0.491088 1_4:-19436407 Msa0154720:CDS
AAAATATCACAGGAGCTAGT+TGG 0.492157 1_4:+19433373 None:intergenic
TCTCACACAAACCATTTCTC+CGG 0.493829 1_4:+19434798 None:intergenic
GCATTTAGCTTTCGAATCAT+GGG 0.496716 1_4:+19433498 None:intergenic
GAGAATATAGGTGACCCTAT+TGG 0.497072 1_4:-19436533 Msa0154720:CDS
AATCATGGGATCGGCTGCTC+CGG 0.497771 1_4:+19433512 None:intergenic
GTTGAACTTGAGCAACATAT+GGG 0.498421 1_4:+19432356 None:intergenic
CGCCAACTTCTGAAACAGTT+GGG 0.498428 1_4:-19433612 Msa0154720:CDS
CTCAATCGGTTTCGACGGAT+CGG 0.498763 1_4:+19435194 None:intergenic
AACCCTTTCACCTTGTTCCA+CGG 0.498978 1_4:+19433878 None:intergenic
ATCGGCTGCTCCGGTATTGG+TGG 0.499889 1_4:+19433521 None:intergenic
TGATGTTGTTGCAGCCTACA+TGG 0.499973 1_4:-19432727 Msa0154720:intron
TAAACCGGTCTTGCCTGTAC+CGG 0.501079 1_4:+19433923 None:intergenic
ATTCTTGTTCATATTCTCAA+AGG 0.503307 1_4:+19436568 None:intergenic
GTTGTGCTTGCCACCAATAC+CGG 0.504279 1_4:-19433531 Msa0154720:CDS
CGCCGTGGAACAAGGTGAAA+GGG 0.506862 1_4:-19433880 Msa0154720:CDS
ATGCTTGCGCGCTCTTGTGA+TGG 0.509880 1_4:+19431939 None:intergenic
TGTCATAGATGAAGCTGGAC+AGG 0.510157 1_4:-19433463 Msa0154720:CDS
TAGGTACGATCAAACACATT+GGG 0.510293 1_4:-19432003 Msa0154720:CDS
AATGCTGTTCCTATGCCACT+TGG 0.510987 1_4:-19436344 Msa0154720:CDS
GGCTGATACACTTACCTATG+AGG 0.511446 1_4:-19434608 Msa0154720:intron
GCCATATTCGACACTTTGGT+AGG 0.513271 1_4:-19431855 Msa0154720:CDS
CAGAACTTCTCAATATTGAA+AGG 0.513339 1_4:-19435278 Msa0154720:CDS
TGTCCATTCCTAAAACTCCT+TGG 0.515753 1_4:+19435355 None:intergenic
AATGCCATCAGTACCTCTAC+AGG 0.516644 1_4:-19435114 Msa0154720:intron
ATGAGAAAAGACAGTCTTGG+AGG 0.517016 1_4:+19433191 None:intergenic
CCTCCCGGTACAGGCAAGAC+CGG 0.518071 1_4:-19433927 Msa0154720:CDS
AGGATTGGGAGGAATGCATC+TGG 0.522459 1_4:-19434872 Msa0154720:CDS
GTCTCATGTTACAATTATTG+TGG 0.524185 1_4:+19431557 None:intergenic
TGGCTAACCAAGAACTCAAT+CGG 0.529869 1_4:+19435180 None:intergenic
AGAACTTCTCAATATTGAAA+GGG 0.529997 1_4:-19435277 Msa0154720:CDS
TTCTTGTTCATATTCTCAAA+GGG 0.531283 1_4:+19436569 None:intergenic
TTGCGAAGAGCATCTAGATC+AGG 0.532387 1_4:-19432642 Msa0154720:CDS
GACGGGGTTCCTGAAGCTGC+CGG 0.532397 1_4:-19432316 Msa0154720:CDS
CTCACACAAACCATTTCTCC+GGG 0.532657 1_4:+19434799 None:intergenic
ATGCGCCATATTCGACACTT+TGG 0.533794 1_4:-19431859 Msa0154720:CDS
TGGGCTTCGAAGGAGATGTA+TGG 0.534352 1_4:-19433228 Msa0154720:CDS
ATTGGCGTCAAACTCAGTCT+TGG 0.534814 1_4:-19436208 Msa0154720:CDS
GTTACAACTTCTTGCATGCA+AGG 0.534893 1_4:-19434754 Msa0154720:CDS
CCTATTGGATGGAAAGATGT+TGG 0.535687 1_4:-19436518 Msa0154720:CDS
GTTCAATTGCAGCTCAGCAC+AGG 0.536033 1_4:-19435413 Msa0154720:intron
TTTAGGAATGGACAGAGAAA+GGG 0.536782 1_4:-19435346 Msa0154720:CDS
GCGCCGTGGAACAAGGTGAA+AGG 0.540009 1_4:-19433881 Msa0154720:CDS
CTTCGAAGCCCAACTTGCAA+TGG 0.540846 1_4:+19433239 None:intergenic
GGTCCTTGGATAACCAATAG+TGG 0.541765 1_4:+19433948 None:intergenic
AAAGAGTGGTAGGTGGCAAT+CGG 0.542226 1_4:+19434824 None:intergenic
CTCAGCACAGGGCAGTTGCA+AGG 0.542941 1_4:-19435401 Msa0154720:CDS
GAGCTGCAACTCTGCATGAA+GGG 0.544095 1_4:-19433305 Msa0154720:CDS
AGAGCTGCAACTCTGCATGA+AGG 0.548566 1_4:-19433306 Msa0154720:CDS
AAGATGAGAAAAGACAGTCT+TGG 0.548973 1_4:+19433188 None:intergenic
TGTTGAATTGGAGTTTACTC+AGG 0.549406 1_4:-19435253 Msa0154720:CDS
CCTATAAGCAATTGTTTGAG+GGG 0.551618 1_4:-19431713 Msa0154720:three_prime_UTR
AAACCGGTCTTGCCTGTACC+GGG 0.552229 1_4:+19433924 None:intergenic
ACAGGCTCGTTGTATAATGA+AGG 0.558434 1_4:-19432614 Msa0154720:CDS
GAGGATGTTGTTGACAAAGA+AGG 0.558454 1_4:+19436951 None:intergenic
TAGCTTTCGAATCATGGGAT+CGG 0.559505 1_4:+19433503 None:intergenic
ACGCCAACTTCTGAAACAGT+TGG 0.559556 1_4:-19433613 Msa0154720:CDS
ACTTCAAGACCAAGTGGCAT+AGG 0.563752 1_4:+19436335 None:intergenic
AGATCTAAGACAATGTTTGA+GGG 0.563780 1_4:-19433658 Msa0154720:CDS
CCACCTACCACTCTTTCACC+CGG 0.565373 1_4:-19434817 Msa0154720:CDS
TTGCAACTCTATTCGGCGAA+GGG 0.566204 1_4:-19434103 Msa0154720:CDS
GTTGCAACTCTATTCGGCGA+AGG 0.568653 1_4:-19434104 Msa0154720:CDS
ATAACATGCGCCGTGGAACA+AGG 0.575282 1_4:-19433888 Msa0154720:CDS
TTGGTTATCCAAGGACCTCC+CGG 0.575336 1_4:-19433942 Msa0154720:CDS
ACCTTGAAAACTATCAATTG+TGG 0.580698 1_4:+19432282 None:intergenic
AATTGTGGAAACTTCAGTAC+CGG 0.581431 1_4:+19432297 None:intergenic
TTGGTTGTCATAGATGAAGC+TGG 0.583914 1_4:-19433468 Msa0154720:CDS
GGGTCAAAGTGTTACAGCAA+AGG 0.584641 1_4:-19435326 Msa0154720:CDS
CGTTAGGTTTGAATAAGAAG+AGG 0.584662 1_4:-19433971 Msa0154720:CDS
CATTTCTCCGGGTGAAAGAG+TGG 0.585965 1_4:+19434810 None:intergenic
TTGCAATGGCATCATTCATA+CGG 0.586486 1_4:+19433253 None:intergenic
TCAAACACATTGGGAGCTGT+CGG 0.588322 1_4:-19431994 Msa0154720:CDS
CTTGACACTCGAATGCCGTA+TGG 0.588670 1_4:-19432680 Msa0154720:CDS
ACACAGCCTAAGAGTGTCCA+AGG 0.588984 1_4:-19435372 Msa0154720:CDS
TAATCCATAGAAGGTAACAT+TGG 0.591798 1_4:+19431778 None:intergenic
TATGGCGCATAAGTCTTGCT+AGG 0.591965 1_4:+19431872 None:intergenic
TGAATTGGAGTTTACTCAGG+AGG 0.593494 1_4:-19435250 Msa0154720:CDS
GCCTTTCTAGAAAATATCAC+AGG 0.593978 1_4:+19433363 None:intergenic
CCATATTCGACACTTTGGTA+GGG 0.594215 1_4:-19431854 Msa0154720:CDS
TGAATGATGCCATTGCAAGT+TGG 0.596245 1_4:-19433248 Msa0154720:CDS
TCTAGAAAGGCATTAGAAGG+TGG 0.596468 1_4:-19433351 Msa0154720:CDS
TTCAATTGCAGCTCAGCACA+GGG 0.597992 1_4:-19435412 Msa0154720:intron
ATATAGGTGACCCTATTGGA+TGG 0.598984 1_4:-19436529 Msa0154720:CDS
TTATCAACAGCTGCATTGGT+AGG 0.599783 1_4:+19433843 None:intergenic
CACAAACAGCAATGAAACAA+AGG 0.600512 1_4:-19436660 Msa0154720:CDS
GCGAAGGGGAAGATGCTGCA+TGG 0.603321 1_4:-19434088 Msa0154720:CDS
ACATCAACTTGCTTCTTCTG+TGG 0.603336 1_4:-19436815 Msa0154720:CDS
AATACCTGTAGAGGTACTGA+TGG 0.603865 1_4:+19435110 None:intergenic
AGTGGTTAAGTATATAAGCA+TGG 0.604206 1_4:+19436902 None:intergenic
CGAGTGTCAAGAAGTAGTAG+AGG 0.608622 1_4:+19432692 None:intergenic
AGTGTTATGCATGATACTAT+GGG 0.610221 1_4:-19431489 Msa0154720:three_prime_UTR
GAGTGGTAGGTGGCAATCGG+TGG 0.614362 1_4:+19434827 None:intergenic
TCTCCGGGTGAAAGAGTGGT+AGG 0.619341 1_4:+19434814 None:intergenic
AGGCCACTATTGGTTATCCA+AGG 0.620754 1_4:-19433951 Msa0154720:CDS
TGATTCTTCTGCTATCGCCA+AGG 0.624032 1_4:+19431968 None:intergenic
GGACACTGTGTTATCCATGT+AGG 0.625911 1_4:+19432713 None:intergenic
TGCAACTCTATTCGGCGAAG+GGG 0.630223 1_4:-19434102 Msa0154720:CDS
GTCTTGCTAGGAACGTGTTG+TGG 0.630547 1_4:+19431884 None:intergenic
TCTCTGCTGAGATTTATCAA+AGG 0.633256 1_4:+19434001 None:intergenic
AAGAACTCAATCGGTTTCGA+CGG 0.634115 1_4:+19435189 None:intergenic
TGTGAGAACATGTGACAGCA+AGG 0.642149 1_4:-19434782 Msa0154720:CDS
GCAAATAATAACATGCGCCG+TGG 0.645010 1_4:-19433895 Msa0154720:CDS
GTAAAAGAGAATACCTGTAG+AGG 0.649202 1_4:+19435101 None:intergenic
GAAGAGCATCTAGATCAGGC+TGG 0.650620 1_4:-19432638 Msa0154720:CDS
CAAGTAACTTCAAGACCAAG+TGG 0.651955 1_4:+19436329 None:intergenic
ATAGGTACGATCAAACACAT+TGG 0.652032 1_4:-19432004 Msa0154720:intron
ATGGCGTGACTCTAAAGCAA+CGG 0.653491 1_4:+19434693 None:intergenic
ATGAAGGGATTCTCACCACT+AGG 0.660150 1_4:-19433290 Msa0154720:CDS
AATATAGGAATCCAGCAAGA+CGG 0.662472 1_4:+19433432 None:intergenic
CCAATTGAAAGACTTCCATA+CGG 0.665067 1_4:+19432665 None:intergenic
GCTTCGAAGGAGATGTATGG+AGG 0.667867 1_4:-19433225 Msa0154720:CDS
TGAATAACAAACGTAAGACC+TGG 0.668047 1_4:+19436383 None:intergenic
ATGAAACAAAGAATGGGACC+AGG 0.673070 1_4:-19436401 Msa0154720:CDS
GTGGAAAATCTAGGTGACGA+TGG 0.673584 1_4:-19434727 Msa0154720:CDS
GTATTGTGTCGTTAACCTAG+TGG 0.677271 1_4:+19433275 None:intergenic
GTTGCTTTAGAGTCACGCCA+TGG 0.679288 1_4:-19434691 Msa0154720:CDS
GTGTCACATAGCTCTTGCTG+AGG 0.682419 1_4:+19435150 None:intergenic
TTGAACTTGAGCAACATATG+GGG 0.689568 1_4:+19432357 None:intergenic
TTTGAGGGACATGCTTGACG+GGG 0.689897 1_4:-19432332 Msa0154720:CDS
CCGGGTGAAAGAGTGGTAGG+TGG 0.693784 1_4:+19434817 None:intergenic
GTGTTATGCATGATACTATG+GGG 0.698502 1_4:-19431488 Msa0154720:three_prime_UTR
CCGGTCTTGCCTGTACCGGG+AGG 0.700623 1_4:+19433927 None:intergenic
TAGAGAAAGTAGGATCACCA+TGG 0.723561 1_4:+19434674 None:intergenic
GTGAGAACATGTGACAGCAA+GGG 0.734905 1_4:-19434781 Msa0154720:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATATTTTTATTTTTTT+GGG - chr1_4:19436741-19436760 Msa0154720:CDS 0.0%
!!! TAGTTTTTGATATTTATATA+AGG - chr1_4:19432698-19432717 Msa0154720:CDS 10.0%
!!! AGTTTTTGATATTTATATAA+GGG - chr1_4:19432699-19432718 Msa0154720:CDS 10.0%
!! TTTCAAATTAAAATAGAATT+TGG + chr1_4:19432830-19432849 None:intergenic 10.0%
!!! TTATATTTTTATTTTTTTGG+GGG - chr1_4:19436743-19436762 Msa0154720:CDS 10.0%
!!! TTTTAGATTTTTTTTGTTCA+TGG + chr1_4:19431505-19431524 None:intergenic 15.0%
!! TAAAAATATTCATCATTGTT+TGG - chr1_4:19436342-19436361 Msa0154720:CDS 15.0%
!!! TATATTTTTATTTTTTTGGG+GGG - chr1_4:19436744-19436763 Msa0154720:CDS 15.0%
!! TTCCAAAAAAAATTCAGTAA+TGG - chr1_4:19431588-19431607 Msa0154720:three_prime_UTR 20.0%
!!! TTCCATTACTGAATTTTTTT+TGG + chr1_4:19431593-19431612 None:intergenic 20.0%
!! ATAATCTCTAATAAGCTAAT+AGG + chr1_4:19432297-19432316 None:intergenic 20.0%
!! CTTATCTATTTATCTAAACA+TGG - chr1_4:19432487-19432506 Msa0154720:intron 20.0%
!! AAACAACATGAATAAGATTA+AGG - chr1_4:19432586-19432605 Msa0154720:CDS 20.0%
!! ACATGAAATACTTAAAGAAA+CGG - chr1_4:19432752-19432771 Msa0154720:intron 20.0%
!!! CATTTATGAACTTTTTAAAC+AGG - chr1_4:19433539-19433558 Msa0154720:CDS 20.0%
!!! TTATGTAAGTTGAAATTAAG+AGG - chr1_4:19433932-19433951 Msa0154720:CDS 20.0%
!! AAACTAAATTTATGCCAAAT+AGG + chr1_4:19434045-19434064 None:intergenic 20.0%
!! GAAAAATAATTAGCTCATAT+GGG + chr1_4:19434068-19434087 None:intergenic 20.0%
!! AGAAAAATAATTAGCTCATA+TGG + chr1_4:19434069-19434088 None:intergenic 20.0%
!! TCAAATAAATCAATCCTAAT+AGG - chr1_4:19435517-19435536 Msa0154720:intron 20.0%
!!! GCTTATTTTTATTACATGAA+TGG - chr1_4:19435669-19435688 Msa0154720:intron 20.0%
!!! GTTTCAACAAATTTTTTACT+TGG - chr1_4:19436233-19436252 Msa0154720:CDS 20.0%
!!! ACTTGGTGAAAAAAATAAAA+TGG - chr1_4:19436250-19436269 Msa0154720:CDS 20.0%
!! CTTGGTGAAAAAAATAAAAT+GGG - chr1_4:19436251-19436270 Msa0154720:CDS 20.0%
!! AACAAAGAAAATCAAGTATA+GGG + chr1_4:19436295-19436314 None:intergenic 20.0%
!! AAACAAAGAAAATCAAGTAT+AGG + chr1_4:19436296-19436315 None:intergenic 20.0%
!!! TAGATTTTTTTTGTTCATGG+AGG + chr1_4:19431502-19431521 None:intergenic 25.0%
!!! CAGTTTTTGTTATTCAATAG+TGG + chr1_4:19431550-19431569 None:intergenic 25.0%
! TTCTTGTTCATATTCTCAAA+GGG + chr1_4:19431865-19431884 None:intergenic 25.0%
! ATTCTTGTTCATATTCTCAA+AGG + chr1_4:19431866-19431885 None:intergenic 25.0%
!!! TTCTGAAATGAAACAAAGAA+TGG - chr1_4:19432023-19432042 Msa0154720:intron 25.0%
!! TCTGAAATGAAACAAAGAAT+GGG - chr1_4:19432024-19432043 Msa0154720:intron 25.0%
! TGAAAATGATCAAAAAGAGT+AGG + chr1_4:19432150-19432169 None:intergenic 25.0%
! AATCACTTGTAAGATTGTTT+AGG - chr1_4:19432327-19432346 Msa0154720:CDS 25.0%
! TTAAGGACTAATGATATGTT+TGG - chr1_4:19432603-19432622 Msa0154720:CDS 25.0%
!!! GAGGTTATTTTGAGTTTATT+TGG - chr1_4:19432628-19432647 Msa0154720:CDS 25.0%
!! TTAGTTCTTGTGTATTTCTT+TGG - chr1_4:19432661-19432680 Msa0154720:CDS 25.0%
! TATTTATATAAGGGTCTTCA+AGG - chr1_4:19432708-19432727 Msa0154720:CDS 25.0%
! AGAACTTCTCAATATTGAAA+GGG - chr1_4:19433154-19433173 Msa0154720:intron 25.0%
! GATGGCATTTAAATTACAAA+TGG + chr1_4:19433306-19433325 None:intergenic 25.0%
! TAATTATAAATGTGATCCAG+TGG - chr1_4:19433362-19433381 Msa0154720:CDS 25.0%
! AAGTTCATAAATGATCATAG+AGG + chr1_4:19433532-19433551 None:intergenic 25.0%
!! ATGAACTTTTTAAACAGGAT+TGG - chr1_4:19433544-19433563 Msa0154720:CDS 25.0%
!! TGAACTTTTTAAACAGGATT+GGG - chr1_4:19433545-19433564 Msa0154720:CDS 25.0%
!! ATTACAGCAACAAAATGTTT+TGG + chr1_4:19433884-19433903 None:intergenic 25.0%
! AATAGGTGAAGTTATATTGA+TGG + chr1_4:19434028-19434047 None:intergenic 25.0%
! TCAATATAACTTCACCTATT+TGG - chr1_4:19434028-19434047 Msa0154720:CDS 25.0%
! ATACGAACATGAATCTTATT+TGG + chr1_4:19434196-19434215 None:intergenic 25.0%
!! GAAAAAACAAATGGAGTATT+AGG - chr1_4:19434399-19434418 Msa0154720:intron 25.0%
! TATTATTTGCTTGAGTAAAC+CGG + chr1_4:19434526-19434545 None:intergenic 25.0%
! GAGTTTAATACCTTAACAAA+AGG + chr1_4:19435281-19435300 None:intergenic 25.0%
! TTTAGAGATGTAACTCAAAA+TGG - chr1_4:19435561-19435580 Msa0154720:intron 25.0%
!! CAAAAAGTACATGTAGTATA+TGG + chr1_4:19435645-19435664 None:intergenic 25.0%
!! GTATTTTCCTTAATTTATGC+TGG - chr1_4:19435865-19435884 Msa0154720:intron 25.0%
! ATCATTACCAGCATAAATTA+AGG + chr1_4:19435875-19435894 None:intergenic 25.0%
! TTCTTGGATCAAAGAATAAA+AGG + chr1_4:19435945-19435964 None:intergenic 25.0%
!! TGATGCTGTAATTTTATCAA+TGG - chr1_4:19436180-19436199 Msa0154720:CDS 25.0%
!!! TAAAAAATTTGTTGAAACCG+TGG + chr1_4:19436231-19436250 None:intergenic 25.0%
! ATACTCATGCATGAAAATTA+TGG - chr1_4:19436841-19436860 Msa0154720:exon 25.0%
AGTGGTTAAGTATATAAGCA+TGG + chr1_4:19431532-19431551 None:intergenic 30.0%
!! AAGCTAGTTTGGATTTTGAT+GGG + chr1_4:19431648-19431667 None:intergenic 30.0%
!! TTGTGATGTTTTGAACTACA+CGG + chr1_4:19431756-19431775 None:intergenic 30.0%
ATAGGAACAGCATTCAAATA+AGG + chr1_4:19432081-19432100 None:intergenic 30.0%
GAGAAAGAAAAAACCTGAAT+TGG + chr1_4:19432268-19432287 None:intergenic 30.0%
ACTAATGATATGTTTGGAAG+AGG - chr1_4:19432609-19432628 Msa0154720:CDS 30.0%
! GGTTTGAAATTGATTGAAGA+GGG + chr1_4:19432809-19432828 None:intergenic 30.0%
! TGGTTTGAAATTGATTGAAG+AGG + chr1_4:19432810-19432829 None:intergenic 30.0%
!! CGCACATCTTATATTTTTGT+TGG + chr1_4:19432936-19432955 None:intergenic 30.0%
CAGAACTTCTCAATATTGAA+AGG - chr1_4:19433153-19433172 Msa0154720:intron 30.0%
TATTGAAAGGGATGTTGAAT+TGG - chr1_4:19433166-19433185 Msa0154720:CDS 30.0%
ATTAGAACATATACATCCAC+TGG + chr1_4:19433381-19433400 None:intergenic 30.0%
!!! CCTTTTAAGTTACACACAAT+TGG + chr1_4:19433509-19433528 None:intergenic 30.0%
CCAATTGTGTGTAACTTAAA+AGG - chr1_4:19433506-19433525 Msa0154720:CDS 30.0%
CCAAATAGTTTAGAGAAAGT+AGG + chr1_4:19433770-19433789 None:intergenic 30.0%
CCTACTTTCTCTAAACTATT+TGG - chr1_4:19433767-19433786 Msa0154720:CDS 30.0%
CTTATTTGAACTGCAATACA+TGG + chr1_4:19434121-19434140 None:intergenic 30.0%
!!! ATTTTTCTGAAGCAGCATTA+GGG + chr1_4:19434274-19434293 None:intergenic 30.0%
AGAAGAATAGTTTGGTAGAT+TGG - chr1_4:19434370-19434389 Msa0154720:intron 30.0%
GAAGAATAGTTTGGTAGATT+GGG - chr1_4:19434371-19434390 Msa0154720:intron 30.0%
TGGGAAGAAGAAAAAACAAA+TGG - chr1_4:19434390-19434409 Msa0154720:intron 30.0%
GTTGAAAAGCTTTCAAATGT+TGG - chr1_4:19434615-19434634 Msa0154720:CDS 30.0%
GGAATAAATATTGTTCGAGT+TGG - chr1_4:19434636-19434655 Msa0154720:CDS 30.0%
!!! TACTGTTTTTGATATACGAG+CGG + chr1_4:19434667-19434686 None:intergenic 30.0%
! AAGATCTAAGACAATGTTTG+AGG - chr1_4:19434772-19434791 Msa0154720:CDS 30.0%
! AGATCTAAGACAATGTTTGA+GGG - chr1_4:19434773-19434792 Msa0154720:CDS 30.0%
!! AAAGCTAAATGCTTTTGACT+TGG - chr1_4:19434944-19434963 Msa0154720:intron 30.0%
!! TCCTGTGATATTTTCTAGAA+AGG - chr1_4:19435067-19435086 Msa0154720:intron 30.0%
!!! TTTTCTAGAAAGGCATTAGA+AGG - chr1_4:19435077-19435096 Msa0154720:intron 30.0%
AGAGAATGGAGATATCAATT+AGG + chr1_4:19435303-19435322 None:intergenic 30.0%
AGACTATTTAGGAGAACTTA+CGG + chr1_4:19435470-19435489 None:intergenic 30.0%
! ATGCGAAAATCTCTTTTTCT+TGG + chr1_4:19435961-19435980 None:intergenic 30.0%
CAGAAAACAGAAATGTCAAA+TGG + chr1_4:19435985-19436004 None:intergenic 30.0%
CCTGAATTTCAGATTCAAAT+TGG + chr1_4:19436025-19436044 None:intergenic 30.0%
! CCAATTTGAATCTGAAATTC+AGG - chr1_4:19436022-19436041 Msa0154720:intron 30.0%
ACTGAACTACAATAGCATTT+GGG + chr1_4:19436054-19436073 None:intergenic 30.0%
!! TCCACAATTGATAGTTTTCA+AGG - chr1_4:19436148-19436167 Msa0154720:intron 30.0%
ACCTTGAAAACTATCAATTG+TGG + chr1_4:19436152-19436171 None:intergenic 30.0%
!! CAATTGATAGTTTTCAAGGT+CGG - chr1_4:19436152-19436171 Msa0154720:intron 30.0%
!! AATTGATAGTTTTCAAGGTC+GGG - chr1_4:19436153-19436172 Msa0154720:intron 30.0%
TGCTAGTGAACTAACATAAT+TGG - chr1_4:19436368-19436387 Msa0154720:CDS 30.0%
TAATCCATAGAAGGTAACAT+TGG + chr1_4:19436656-19436675 None:intergenic 30.0%
GCATTTCTAAATGTGTTTCA+AGG + chr1_4:19436699-19436718 None:intergenic 30.0%
GTCTCATGTTACAATTATTG+TGG + chr1_4:19436877-19436896 None:intergenic 30.0%
AAGTGTTATGCATGATACTA+TGG - chr1_4:19436941-19436960 Msa0154720:five_prime_UTR 30.0%
AGTGTTATGCATGATACTAT+GGG - chr1_4:19436942-19436961 Msa0154720:five_prime_UTR 30.0%
ATGGGGTAAAAATTGTTTGA+TGG - chr1_4:19436960-19436979 Msa0154720:five_prime_UTR 30.0%
!! GAAGCTAGTTTGGATTTTGA+TGG + chr1_4:19431649-19431668 None:intergenic 35.0%
TGAAGATGATGAAGCTAGTT+TGG + chr1_4:19431659-19431678 None:intergenic 35.0%
CTAGCTTCATCATCTTCATT+TGG - chr1_4:19431661-19431680 Msa0154720:three_prime_UTR 35.0%
CACAAACAGCAATGAAACAA+AGG - chr1_4:19431771-19431790 Msa0154720:exon 35.0%
! TCTCCTTCTTCTTCTTTTTG+TGG + chr1_4:19431806-19431825 None:intergenic 35.0%
CAACATCTTTCCATCCAATA+GGG + chr1_4:19431915-19431934 None:intergenic 35.0%
GAAAGATGTTGGAAAAAGTG+TGG - chr1_4:19431924-19431943 Msa0154720:CDS 35.0%
! ACGTGAGAGTATGAAATCTA+TGG - chr1_4:19431957-19431976 Msa0154720:CDS 35.0%
TGCTGAGTTACTTGAAGATT+TGG - chr1_4:19431996-19432015 Msa0154720:CDS 35.0%
TGAATAACAAACGTAAGACC+TGG + chr1_4:19432051-19432070 None:intergenic 35.0%
CTTCAAGATATGCAGAGTAA+AGG - chr1_4:19432189-19432208 Msa0154720:intron 35.0%
AGATATGCAGAGTAAAGGTT+TGG - chr1_4:19432194-19432213 Msa0154720:intron 35.0%
! GTAAAGGTTTGGTTGAAGAT+TGG - chr1_4:19432205-19432224 Msa0154720:intron 35.0%
TTAAAGAAACGGTTTATCCG+AGG - chr1_4:19432763-19432782 Msa0154720:intron 35.0%
ACTGATAGGTTAATACACCT+CGG + chr1_4:19432783-19432802 None:intergenic 35.0%
!! TTTTAGGAATGGACAGAGAA+AGG - chr1_4:19433084-19433103 Msa0154720:intron 35.0%
TTTAGGAATGGACAGAGAAA+GGG - chr1_4:19433085-19433104 Msa0154720:intron 35.0%
!! GAGAAGTTCTGACATGTTTT+GGG + chr1_4:19433144-19433163 None:intergenic 35.0%
!! TGAGAAGTTCTGACATGTTT+TGG + chr1_4:19433145-19433164 None:intergenic 35.0%
TGTTGAATTGGAGTTTACTC+AGG - chr1_4:19433178-19433197 Msa0154720:CDS 35.0%
GTAAAAGAGAATACCTGTAG+AGG + chr1_4:19433333-19433352 None:intergenic 35.0%
! ACTTTTTAAACAGGATTGGG+AGG - chr1_4:19433548-19433567 Msa0154720:CDS 35.0%
!! CTGGTGTTATTCAAGATTGA+AGG - chr1_4:19433578-19433597 Msa0154720:CDS 35.0%
CATTGATCGTATTCAAGGAT+TGG - chr1_4:19433802-19433821 Msa0154720:CDS 35.0%
GATAGAAATCAGTACCTCAT+AGG + chr1_4:19433840-19433859 None:intergenic 35.0%
! AGGTTTTCTCTAGTCAAATG+AGG - chr1_4:19433952-19433971 Msa0154720:CDS 35.0%
! GGTTTTCTCTAGTCAAATGA+GGG - chr1_4:19433953-19433972 Msa0154720:CDS 35.0%
ACGATAATGATGAACAGAAG+CGG + chr1_4:19433991-19434010 None:intergenic 35.0%
!!! CATTTTTCTGAAGCAGCATT+AGG + chr1_4:19434275-19434294 None:intergenic 35.0%
! CTAATGCTGCTTCAGAAAAA+TGG - chr1_4:19434273-19434292 Msa0154720:intron 35.0%
GTTGCAACAACAGAAATTGA+TGG + chr1_4:19434315-19434334 None:intergenic 35.0%
TCTGTTGTTGCAACTCTATT+CGG - chr1_4:19434321-19434340 Msa0154720:intron 35.0%
ATGGCTTGAGAAGAATAGTT+TGG - chr1_4:19434362-19434381 Msa0154720:intron 35.0%
TCTCTGCTGAGATTTATCAA+AGG + chr1_4:19434433-19434452 None:intergenic 35.0%
CGTTAGGTTTGAATAAGAAG+AGG - chr1_4:19434460-19434479 Msa0154720:intron 35.0%
CATATTATCAACAGCTGCAT+TGG + chr1_4:19434595-19434614 None:intergenic 35.0%
!! CAATGCAGCTGTTGATAATA+TGG - chr1_4:19434593-19434612 Msa0154720:intron 35.0%
!!! ACTGTTTTTGATATACGAGC+GGG + chr1_4:19434666-19434685 None:intergenic 35.0%
CGCATTTACAATTTCTCCTA+AGG + chr1_4:19434700-19434719 None:intergenic 35.0%
AGAGGAAGAAATCTGATCTA+AGG - chr1_4:19434748-19434767 Msa0154720:CDS 35.0%
!! GCATTTAGCTTTCGAATCAT+GGG + chr1_4:19434936-19434955 None:intergenic 35.0%
!! AGCATTTAGCTTTCGAATCA+TGG + chr1_4:19434937-19434956 None:intergenic 35.0%
AATATAGGAATCCAGCAAGA+CGG + chr1_4:19435002-19435021 None:intergenic 35.0%
AAAATATCACAGGAGCTAGT+TGG + chr1_4:19435061-19435080 None:intergenic 35.0%
! GCCTTTCTAGAAAATATCAC+AGG + chr1_4:19435071-19435090 None:intergenic 35.0%
TTGCAATGGCATCATTCATA+CGG + chr1_4:19435181-19435200 None:intergenic 35.0%
AAGATGAGAAAAGACAGTCT+TGG + chr1_4:19435246-19435265 None:intergenic 35.0%
! TGTAGACTCTCCTTTTGTTA+AGG - chr1_4:19435268-19435287 Msa0154720:CDS 35.0%
! AAGGCTGCTATTTACATCTT+GGG - chr1_4:19435333-19435352 Msa0154720:CDS 35.0%
TTAAGCTGCTTATCCAAACA+AGG + chr1_4:19435359-19435378 None:intergenic 35.0%
AAACTCCTATAGTTAGAGCA+AGG + chr1_4:19435544-19435563 None:intergenic 35.0%
CCAATTGAAAGACTTCCATA+CGG + chr1_4:19435769-19435788 None:intergenic 35.0%
GACTGAACTACAATAGCATT+TGG + chr1_4:19436055-19436074 None:intergenic 35.0%
TTGAACTTGAGCAACATATG+GGG + chr1_4:19436077-19436096 None:intergenic 35.0%
GTTGAACTTGAGCAACATAT+GGG + chr1_4:19436078-19436097 None:intergenic 35.0%
AGTTGAACTTGAGCAACATA+TGG + chr1_4:19436079-19436098 None:intergenic 35.0%
! TTGCTCAAGTTCAACTTTTG+AGG - chr1_4:19436083-19436102 Msa0154720:intron 35.0%
! TGCTCAAGTTCAACTTTTGA+GGG - chr1_4:19436084-19436103 Msa0154720:intron 35.0%
AATTGTGGAAACTTCAGTAC+CGG + chr1_4:19436137-19436156 None:intergenic 35.0%
! CTTTGTTTCATAAGTGTTGC+TGG - chr1_4:19436308-19436327 Msa0154720:CDS 35.0%
ATAGGTACGATCAAACACAT+TGG - chr1_4:19436427-19436446 Msa0154720:CDS 35.0%
GAATCCAATGTTACCTTCTA+TGG - chr1_4:19436649-19436668 Msa0154720:CDS 35.0%
TTGCAACACTAATCCATAGA+AGG + chr1_4:19436665-19436684 None:intergenic 35.0%
TGCCTATAAGCAATTGTTTG+AGG - chr1_4:19436716-19436735 Msa0154720:CDS 35.0%
GCCTATAAGCAATTGTTTGA+GGG - chr1_4:19436717-19436736 Msa0154720:CDS 35.0%
CCTATAAGCAATTGTTTGAG+GGG - chr1_4:19436718-19436737 Msa0154720:CDS 35.0%
ATGCATAACACTTGCATCTA+TGG + chr1_4:19436934-19436953 None:intergenic 35.0%
GTGTTATGCATGATACTATG+GGG - chr1_4:19436943-19436962 Msa0154720:five_prime_UTR 35.0%
GAGGATGTTGTTGACAAAGA+AGG + chr1_4:19431483-19431502 None:intergenic 40.0%
! ACATCAACTTGCTTCTTCTG+TGG - chr1_4:19431616-19431635 Msa0154720:three_prime_UTR 40.0%
! CTTCTTCTTTTTGTGGTGCT+TGG + chr1_4:19431799-19431818 None:intergenic 40.0%
GCACCACAAAAAGAAGAAGA+AGG - chr1_4:19431800-19431819 Msa0154720:CDS 40.0%
CTTCACGTGCATGAGAATAT+AGG - chr1_4:19431886-19431905 Msa0154720:CDS 40.0%
GAGAATATAGGTGACCCTAT+TGG - chr1_4:19431898-19431917 Msa0154720:CDS 40.0%
ATATAGGTGACCCTATTGGA+TGG - chr1_4:19431902-19431921 Msa0154720:CDS 40.0%
CCAACATCTTTCCATCCAAT+AGG + chr1_4:19431916-19431935 None:intergenic 40.0%
CCTATTGGATGGAAAGATGT+TGG - chr1_4:19431913-19431932 Msa0154720:CDS 40.0%
! TTGGAAAAAGTGTGGTGAGT+TGG - chr1_4:19431932-19431951 Msa0154720:CDS 40.0%
ATGAAACAAAGAATGGGACC+AGG - chr1_4:19432030-19432049 Msa0154720:intron 40.0%
CAAGTAACTTCAAGACCAAG+TGG + chr1_4:19432105-19432124 None:intergenic 40.0%
TCAGTCTTGGAAGTTGCTTA+AGG - chr1_4:19432236-19432255 Msa0154720:intron 40.0%
ATTGAAGAGGGCAAACTGAT+AGG + chr1_4:19432797-19432816 None:intergenic 40.0%
CAACGCGATAAGATTGAGAA+TGG - chr1_4:19432996-19433015 Msa0154720:intron 40.0%
AAAACTCCTTGGACACTCTT+AGG + chr1_4:19433068-19433087 None:intergenic 40.0%
!!! AAGAGTGTCCAAGGAGTTTT+AGG - chr1_4:19433068-19433087 Msa0154720:intron 40.0%
!!! TGTCCAAGGAGTTTTAGGAA+TGG - chr1_4:19433073-19433092 Msa0154720:intron 40.0%
TGTCCATTCCTAAAACTCCT+TGG + chr1_4:19433079-19433098 None:intergenic 40.0%
TGAATTGGAGTTTACTCAGG+AGG - chr1_4:19433181-19433200 Msa0154720:CDS 40.0%
!! TCGGAAGCATCATCTTGTTT+AGG + chr1_4:19433221-19433240 None:intergenic 40.0%
! AAGAACTCAATCGGTTTCGA+CGG + chr1_4:19433245-19433264 None:intergenic 40.0%
TGGCTAACCAAGAACTCAAT+CGG + chr1_4:19433254-19433273 None:intergenic 40.0%
!! AATACCTGTAGAGGTACTGA+TGG + chr1_4:19433324-19433343 None:intergenic 40.0%
TCTCACACAAACCATTTCTC+CGG + chr1_4:19433636-19433655 None:intergenic 40.0%
GTTACAACTTCTTGCATGCA+AGG - chr1_4:19433677-19433696 Msa0154720:CDS 40.0%
CAAGGAGTTGTGGAAAATCT+AGG - chr1_4:19433695-19433714 Msa0154720:CDS 40.0%
TAGAGAAAGTAGGATCACCA+TGG + chr1_4:19433760-19433779 None:intergenic 40.0%
GAATAAGAAGAGGCCACTAT+TGG - chr1_4:19434470-19434489 Msa0154720:intron 40.0%
! TTATCAACAGCTGCATTGGT+AGG + chr1_4:19434591-19434610 None:intergenic 40.0%
ACAGTAGCATCAAAGTCCTT+AGG - chr1_4:19434681-19434700 Msa0154720:CDS 40.0%
TTCCCAACTGTTTCAGAAGT+TGG + chr1_4:19434824-19434843 None:intergenic 40.0%
GGGAAAGTCGCTAAAGAAAA+AGG - chr1_4:19434839-19434858 Msa0154720:CDS 40.0%
TGAAGTTCTATCTAGTGCTC+AGG - chr1_4:19434878-19434897 Msa0154720:intron 40.0%
TAGCTTTCGAATCATGGGAT+CGG + chr1_4:19434931-19434950 None:intergenic 40.0%
TTGGTTGTCATAGATGAAGC+TGG - chr1_4:19434963-19434982 Msa0154720:intron 40.0%
TTGCTGGATTCCTATATTGC+AGG - chr1_4:19435004-19435023 Msa0154720:intron 40.0%
!! TCTAGAAAGGCATTAGAAGG+TGG - chr1_4:19435080-19435099 Msa0154720:intron 40.0%
! AAGGCATTAGAAGGTGGTTT+AGG - chr1_4:19435086-19435105 Msa0154720:intron 40.0%
! GTATTGTGTCGTTAACCTAG+TGG + chr1_4:19435159-19435178 None:intergenic 40.0%
TGAATGATGCCATTGCAAGT+TGG - chr1_4:19435183-19435202 Msa0154720:CDS 40.0%
GAATGATGCCATTGCAAGTT+GGG - chr1_4:19435184-19435203 Msa0154720:CDS 40.0%
ATGAGAAAAGACAGTCTTGG+AGG + chr1_4:19435243-19435262 None:intergenic 40.0%
CCTTCACTTCACAAAGAGAA+TGG + chr1_4:19435317-19435336 None:intergenic 40.0%
CCATTCTCTTTGTGAAGTGA+AGG - chr1_4:19435314-19435333 Msa0154720:CDS 40.0%
! GAAGGCTGCTATTTACATCT+TGG - chr1_4:19435332-19435351 Msa0154720:CDS 40.0%
!! TTTACATCTTGGGCCTTGTT+TGG - chr1_4:19435343-19435362 Msa0154720:CDS 40.0%
GTTCTCCTAAATAGTCTCAC+AGG - chr1_4:19435473-19435492 Msa0154720:intron 40.0%
AAGCACCTGTGAGACTATTT+AGG + chr1_4:19435481-19435500 None:intergenic 40.0%
AGTTAGAGCAAGGACCTATT+AGG + chr1_4:19435534-19435553 None:intergenic 40.0%
TAGGTCCTTGCTCTAACTAT+AGG - chr1_4:19435536-19435555 Msa0154720:intron 40.0%
CCGTATGGAAGTCTTTCAAT+TGG - chr1_4:19435766-19435785 Msa0154720:intron 40.0%
ACAGGCTCGTTGTATAATGA+AGG - chr1_4:19435817-19435836 Msa0154720:intron 40.0%
GAATCCAAACTCTACAACCA+CGG - chr1_4:19436211-19436230 Msa0154720:CDS 40.0%
CCATATTCGACACTTTGGTA+GGG - chr1_4:19436577-19436596 Msa0154720:CDS 40.0%
! CACGTAGAACCAGATAGTTT+TGG - chr1_4:19436605-19436624 Msa0154720:CDS 40.0%
!!! GTAGAACCAGATAGTTTTGG+AGG - chr1_4:19436608-19436627 Msa0154720:CDS 40.0%
!!! AACCAGATAGTTTTGGAGGA+GGG - chr1_4:19436612-19436631 Msa0154720:CDS 40.0%
CCCCTCAAACAATTGCTTAT+AGG + chr1_4:19436721-19436740 None:intergenic 40.0%
!! TTTGGGGGGTATTCATAAAC+TGG - chr1_4:19436758-19436777 Msa0154720:CDS 40.0%
AATGCTGTTCCTATGCCACT+TGG - chr1_4:19432087-19432106 Msa0154720:intron 45.0%
ACTTCAAGACCAAGTGGCAT+AGG + chr1_4:19432099-19432118 None:intergenic 45.0%
ATTGGCGTCAAACTCAGTCT+TGG - chr1_4:19432223-19432242 Msa0154720:intron 45.0%
CTTAAGGAGCTTGCCAATTC+AGG - chr1_4:19432252-19432271 Msa0154720:CDS 45.0%
TTCAATTGCAGCTCAGCACA+GGG - chr1_4:19433019-19433038 Msa0154720:intron 45.0%
! GGGTCAAAGTGTTACAGCAA+AGG - chr1_4:19433105-19433124 Msa0154720:intron 45.0%
GTCGAAACCGATTGAGTTCT+TGG - chr1_4:19433244-19433263 Msa0154720:CDS 45.0%
AATGCCATCAGTACCTCTAC+AGG - chr1_4:19433317-19433336 Msa0154720:CDS 45.0%
AAAGAGTGGTAGGTGGCAAT+CGG + chr1_4:19433610-19433629 None:intergenic 45.0%
CTCACACAAACCATTTCTCC+GGG + chr1_4:19433635-19433654 None:intergenic 45.0%
TGTGAGAACATGTGACAGCA+AGG - chr1_4:19433649-19433668 Msa0154720:CDS 45.0%
GTGAGAACATGTGACAGCAA+GGG - chr1_4:19433650-19433669 Msa0154720:CDS 45.0%
TTCTTGCATGCAAGGAGTTG+TGG - chr1_4:19433685-19433704 Msa0154720:CDS 45.0%
GTGGAAAATCTAGGTGACGA+TGG - chr1_4:19433704-19433723 Msa0154720:CDS 45.0%
!! ATGGCGTGACTCTAAAGCAA+CGG + chr1_4:19433741-19433760 None:intergenic 45.0%
! GTGCGCATTGATCGTATTCA+AGG - chr1_4:19433797-19433816 Msa0154720:CDS 45.0%
GGCTGATACACTTACCTATG+AGG - chr1_4:19433823-19433842 Msa0154720:CDS 45.0%
ATGATGAACAGAAGCGGCAA+GGG + chr1_4:19433985-19434004 None:intergenic 45.0%
AATGATGAACAGAAGCGGCA+AGG + chr1_4:19433986-19434005 None:intergenic 45.0%
TTGCAACTCTATTCGGCGAA+GGG - chr1_4:19434328-19434347 Msa0154720:intron 45.0%
! AGGCCACTATTGGTTATCCA+AGG - chr1_4:19434480-19434499 Msa0154720:intron 45.0%
GGTCCTTGGATAACCAATAG+TGG + chr1_4:19434486-19434505 None:intergenic 45.0%
GCAAATAATAACATGCGCCG+TGG - chr1_4:19434536-19434555 Msa0154720:intron 45.0%
AACCCTTTCACCTTGTTCCA+CGG + chr1_4:19434556-19434575 None:intergenic 45.0%
AGGGATGATTCATTAGCTGC+AGG - chr1_4:19434792-19434811 Msa0154720:CDS 45.0%
!! ACGCCAACTTCTGAAACAGT+TGG - chr1_4:19434818-19434837 Msa0154720:CDS 45.0%
!! CGCCAACTTCTGAAACAGTT+GGG - chr1_4:19434819-19434838 Msa0154720:CDS 45.0%
TGTCATAGATGAAGCTGGAC+AGG - chr1_4:19434968-19434987 Msa0154720:intron 45.0%
CATCGTTTCGCCTGCAATAT+AGG + chr1_4:19435017-19435036 None:intergenic 45.0%
GCGAAACGATGCATTCTTGT+TGG - chr1_4:19435026-19435045 Msa0154720:intron 45.0%
ATGAAGGGATTCTCACCACT+AGG - chr1_4:19435141-19435160 Msa0154720:CDS 45.0%
TGTAGGCTGCAACAACATCA+AGG + chr1_4:19435704-19435723 None:intergenic 45.0%
TGATGTTGTTGCAGCCTACA+TGG - chr1_4:19435704-19435723 Msa0154720:intron 45.0%
GGACACTGTGTTATCCATGT+AGG + chr1_4:19435721-19435740 None:intergenic 45.0%
CGAGTGTCAAGAAGTAGTAG+AGG + chr1_4:19435742-19435761 None:intergenic 45.0%
!! TTGCGAAGAGCATCTAGATC+AGG - chr1_4:19435789-19435808 Msa0154720:intron 45.0%
!! CTTTTGAGGGACATGCTTGA+CGG - chr1_4:19436097-19436116 Msa0154720:intron 45.0%
!! TTTTGAGGGACATGCTTGAC+GGG - chr1_4:19436098-19436117 Msa0154720:intron 45.0%
GAAACCGTGGTTGTAGAGTT+TGG + chr1_4:19436218-19436237 None:intergenic 45.0%
TGATTCTTCTGCTATCGCCA+AGG + chr1_4:19436466-19436485 None:intergenic 45.0%
TATGGCGCATAAGTCTTGCT+AGG + chr1_4:19436562-19436581 None:intergenic 45.0%
ATGCGCCATATTCGACACTT+TGG - chr1_4:19436572-19436591 Msa0154720:CDS 45.0%
GCCATATTCGACACTTTGGT+AGG - chr1_4:19436576-19436595 Msa0154720:CDS 45.0%
!! CCCTACCAAAGTGTCGAATA+TGG + chr1_4:19436580-19436599 None:intergenic 45.0%
!!! GAACCAGATAGTTTTGGAGG+AGG - chr1_4:19436611-19436630 Msa0154720:CDS 45.0%
AACCCTCCTCCAAAACTATC+TGG + chr1_4:19436617-19436636 None:intergenic 45.0%
!!! GATAGTTTTGGAGGAGGGTT+TGG - chr1_4:19436617-19436636 Msa0154720:CDS 45.0%
!! TTCAAAAAATATAATAAAAT+AGG - chr1_4:19436409-19436428 Msa0154720:CDS 5.0%
!!! GATTTATATTTTTATTTTTT+TGG - chr1_4:19436740-19436759 Msa0154720:CDS 5.0%
!!! TTTATATTTTTATTTTTTTG+GGG - chr1_4:19436742-19436761 Msa0154720:CDS 5.0%
GTTCAATTGCAGCTCAGCAC+AGG - chr1_4:19433018-19433037 Msa0154720:intron 50.0%
!! ACACAGCCTAAGAGTGTCCA+AGG - chr1_4:19433059-19433078 Msa0154720:intron 50.0%
! CTCAATCGGTTTCGACGGAT+CGG + chr1_4:19433240-19433259 None:intergenic 50.0%
GTGTCACATAGCTCTTGCTG+AGG + chr1_4:19433284-19433303 None:intergenic 50.0%
AGGATTGGGAGGAATGCATC+TGG - chr1_4:19433559-19433578 Msa0154720:CDS 50.0%
CATTTCTCCGGGTGAAAGAG+TGG + chr1_4:19433624-19433643 None:intergenic 50.0%
CACTCTTTCACCCGGAGAAA+TGG - chr1_4:19433622-19433641 Msa0154720:CDS 50.0%
!! GTTGCTTTAGAGTCACGCCA+TGG - chr1_4:19433740-19433759 Msa0154720:CDS 50.0%
GTTGCAACTCTATTCGGCGA+AGG - chr1_4:19434327-19434346 Msa0154720:intron 50.0%
TGCAACTCTATTCGGCGAAG+GGG - chr1_4:19434329-19434348 Msa0154720:intron 50.0%
CAGCAGAGAGCAATTGCGTT+AGG - chr1_4:19434444-19434463 Msa0154720:intron 50.0%
TTGGTTATCCAAGGACCTCC+CGG - chr1_4:19434489-19434508 Msa0154720:intron 50.0%
TAAACCGGTCTTGCCTGTAC+CGG + chr1_4:19434511-19434530 None:intergenic 50.0%
ATAACATGCGCCGTGGAACA+AGG - chr1_4:19434543-19434562 Msa0154720:intron 50.0%
!! GTTTTCGCGAAGAGTGTGAG+AGG - chr1_4:19434730-19434749 Msa0154720:CDS 50.0%
GTTGTGCTTGCCACCAATAC+CGG - chr1_4:19434900-19434919 Msa0154720:intron 50.0%
AGGCAATTGAACCGTCTTGC+TGG - chr1_4:19434988-19435007 Msa0154720:intron 50.0%
AGAGCTGCAACTCTGCATGA+AGG - chr1_4:19435125-19435144 Msa0154720:CDS 50.0%
GAGCTGCAACTCTGCATGAA+GGG - chr1_4:19435126-19435145 Msa0154720:CDS 50.0%
CTTCGAAGCCCAACTTGCAA+TGG + chr1_4:19435195-19435214 None:intergenic 50.0%
! CATTGCAAGTTGGGCTTCGA+AGG - chr1_4:19435193-19435212 Msa0154720:CDS 50.0%
TGGGCTTCGAAGGAGATGTA+TGG - chr1_4:19435203-19435222 Msa0154720:CDS 50.0%
GCTTCGAAGGAGATGTATGG+AGG - chr1_4:19435206-19435225 Msa0154720:CDS 50.0%
CTTGACACTCGAATGCCGTA+TGG - chr1_4:19435751-19435770 Msa0154720:intron 50.0%
!! GAAGAGCATCTAGATCAGGC+TGG - chr1_4:19435793-19435812 Msa0154720:intron 50.0%
CATCTAGATCAGGCTGGAAC+AGG - chr1_4:19435799-19435818 Msa0154720:intron 50.0%
TTTGAGGGACATGCTTGACG+GGG - chr1_4:19436099-19436118 Msa0154720:intron 50.0%
GTCTTGCTAGGAACGTGTTG+TGG + chr1_4:19436550-19436569 None:intergenic 50.0%
TTTGGAGGAGGGTTTGGACT+TGG - chr1_4:19436623-19436642 Msa0154720:CDS 50.0%
CACATAGCTCTTGCTGAGGC+TGG + chr1_4:19433280-19433299 None:intergenic 55.0%
CCACCTACCACTCTTTCACC+CGG - chr1_4:19433614-19433633 Msa0154720:CDS 55.0%
TCTCCGGGTGAAAGAGTGGT+AGG + chr1_4:19433620-19433639 None:intergenic 55.0%
TTAGGGCTTCACAGTTGCGC+TGG + chr1_4:19434257-19434276 None:intergenic 55.0%
AAACCGGTCTTGCCTGTACC+GGG + chr1_4:19434510-19434529 None:intergenic 55.0%
CGCCGTGGAACAAGGTGAAA+GGG - chr1_4:19434551-19434570 Msa0154720:intron 55.0%
AATCATGGGATCGGCTGCTC+CGG + chr1_4:19434922-19434941 None:intergenic 55.0%
!! ACTTCAGTACCGGCAGCTTC+AGG + chr1_4:19436127-19436146 None:intergenic 55.0%
ATGCTTGCGCGCTCTTGTGA+TGG + chr1_4:19436495-19436514 None:intergenic 55.0%
CTCAGCACAGGGCAGTTGCA+AGG - chr1_4:19433030-19433049 Msa0154720:intron 60.0%
! GCTCTTGCTGAGGCTGGCTA+TGG + chr1_4:19433274-19433293 None:intergenic 60.0%
GAGTGGTAGGTGGCAATCGG+TGG + chr1_4:19433607-19433626 None:intergenic 60.0%
CCGGGTGAAAGAGTGGTAGG+TGG + chr1_4:19433617-19433636 None:intergenic 60.0%
GCGAAGGGGAAGATGCTGCA+TGG - chr1_4:19434343-19434362 Msa0154720:intron 60.0%
ATCCAAGGACCTCCCGGTAC+AGG - chr1_4:19434495-19434514 Msa0154720:intron 60.0%
GCGCCGTGGAACAAGGTGAA+AGG - chr1_4:19434550-19434569 Msa0154720:intron 60.0%
! ATCGGCTGCTCCGGTATTGG+TGG + chr1_4:19434913-19434932 None:intergenic 60.0%
TGCCTGTACCGGGAGGTCCT+TGG + chr1_4:19434500-19434519 None:intergenic 65.0%
CCTCCCGGTACAGGCAAGAC+CGG - chr1_4:19434504-19434523 Msa0154720:intron 65.0%
GGGATCGGCTGCTCCGGTAT+TGG + chr1_4:19434916-19434935 None:intergenic 65.0%
GACGGGGTTCCTGAAGCTGC+CGG - chr1_4:19436115-19436134 Msa0154720:intron 65.0%
CCGGTCTTGCCTGTACCGGG+AGG + chr1_4:19434507-19434526 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 19431451 19437002 19431451 ID=Msa0154720;Name=Msa0154720
chr1_4 mRNA 19431451 19437002 19431451 ID=Msa0154720-mRNA-1;Parent=Msa0154720;Name=Msa0154720-mRNA-1;_AED=0.02;_eAED=0.02;_QI=156|1|1|1|1|1|7|326|954
chr1_4 exon 19431451 19432022 19431451 ID=Msa0154720-mRNA-1:exon:7143;Parent=Msa0154720-mRNA-1
chr1_4 exon 19432252 19432409 19432252 ID=Msa0154720-mRNA-1:exon:7142;Parent=Msa0154720-mRNA-1
chr1_4 exon 19432567 19432735 19432567 ID=Msa0154720-mRNA-1:exon:7141;Parent=Msa0154720-mRNA-1
chr1_4 exon 19433164 19434195 19433164 ID=Msa0154720-mRNA-1:exon:7140;Parent=Msa0154720-mRNA-1
chr1_4 exon 19434609 19434892 19434609 ID=Msa0154720-mRNA-1:exon:7139;Parent=Msa0154720-mRNA-1
chr1_4 exon 19435115 19435423 19435115 ID=Msa0154720-mRNA-1:exon:7138;Parent=Msa0154720-mRNA-1
chr1_4 exon 19436180 19437002 19436180 ID=Msa0154720-mRNA-1:exon:7137;Parent=Msa0154720-mRNA-1
chr1_4 five_prime_UTR 19436847 19437002 19436847 ID=Msa0154720-mRNA-1:five_prime_utr;Parent=Msa0154720-mRNA-1
chr1_4 CDS 19436180 19436846 19436180 ID=Msa0154720-mRNA-1:cds;Parent=Msa0154720-mRNA-1
chr1_4 CDS 19435115 19435423 19435115 ID=Msa0154720-mRNA-1:cds;Parent=Msa0154720-mRNA-1
chr1_4 CDS 19434609 19434892 19434609 ID=Msa0154720-mRNA-1:cds;Parent=Msa0154720-mRNA-1
chr1_4 CDS 19433164 19434195 19433164 ID=Msa0154720-mRNA-1:cds;Parent=Msa0154720-mRNA-1
chr1_4 CDS 19432567 19432735 19432567 ID=Msa0154720-mRNA-1:cds;Parent=Msa0154720-mRNA-1
chr1_4 CDS 19432252 19432409 19432252 ID=Msa0154720-mRNA-1:cds;Parent=Msa0154720-mRNA-1
chr1_4 CDS 19431777 19432022 19431777 ID=Msa0154720-mRNA-1:cds;Parent=Msa0154720-mRNA-1
chr1_4 three_prime_UTR 19431451 19431776 19431451 ID=Msa0154720-mRNA-1:three_prime_utr;Parent=Msa0154720-mRNA-1
Gene Sequence

>Msa0154720

ATGGAAGCAACATCAACTTGCTTCTTCTGTGGTAGAATCCCATCAAAATCCAAACTAGCTTCATCATCTTCATTTGGATCATTTTGTTTATTAACACGCAACAATATTACTACAATCATGTGCAAAACATCATTGAAAACACACAACCGTGTAGTTCAAAACATCACAAACAGCAATGAAACAAAGGCTCCAAGCACCACAAAAAGAAGAAGAAGGAGAAGAAAAAACGATGCAGCAGCAATAGAAATTCAACTACCCTTTGAGAATATGAACAAGAATCTTCACGTGCATGAGAATATAGGTGACCCTATTGGATGGAAAGATGTTGGAAAAAGTGTGGTGAGTTGGATACGTGAGAGTATGAAATCTATGGCTTTTGAGATTGCTTCTGCTGAGTTACTTGAAGATTTGGAGTTTTCTGAAATGAAACAAAGAATGGGACCAGGTCTTACGTTTGTTATTCAAGCACAACCTTATTTGAATGCTGTTCCTATGCCACTTGGTCTTGAAGTTACTTGTTTGAAAGCTTGTACTCATTATCCTACTCTTTTTGATCATTTTCAAAGAGAGTTGCGTGATGTTCTTCAAGATATGCAGAGTAAAGGTTTGGTTGAAGATTGGCGTCAAACTCAGTCTTGGAAGTTGCTTAAGGAGCTTGCCAATTCAGCTCAGCACAGGGCAGTTGCAAGGAATGTAACACAGCCTAAGAGTGTCCAAGGAGTTTTAGGAATGGACAGAGAAAGGGTCAAAGTGTTACAGCAAAGGATCGATGAATTCACCCAAAACATGTCAGAACTTCTCAATATTGAAAGGGATGTTGAATTGGAGTTTACTCAGGAGGAATTAGATGCTGTTCCTAAACAAGATGATGCTTCCGATCCGTCGAAACCGATTGAGTTCTTGGTTAGCCATAGCCAGCCTCAGCAAGAGCTATGTGACACCATTTGTAATTTAAATGCCATCAGTACCTCTACAGGATTGGGAGGAATGCATCTGGTGTTATTCAAGATTGAAGGAAACCACCGATTGCCACCTACCACTCTTTCACCCGGAGAAATGGTTTGTGTGAGAACATGTGACAGCAAGGGTGCAGTTACAACTTCTTGCATGCAAGGAGTTGTGGAAAATCTAGGTGACGATGGCTATAGCATTACCGTTGCTTTAGAGTCACGCCATGGTGATCCTACTTTCTCTAAACTATTTGGAAAGAATGTGCGCATTGATCGTATTCAAGGATTGGCTGATACACTTACCTATGAGCGCAACTGTGAAGCCCTAATGCTGCTTCAGAAAAATGGTTTGCAAAAGAAAAATCCATCAATTTCTGTTGTTGCAACTCTATTCGGCGAAGGGGAAGATGCTGCATGGCTTGAGAAGAATAGTTTGGTAGATTGGGAAGAAGAAAAAACAAATGGAGTATTAGGAAGTGAATCCTTTGATAAATCTCAGCAGAGAGCAATTGCGTTAGGTTTGAATAAGAAGAGGCCACTATTGGTTATCCAAGGACCTCCCGGTACAGGCAAGACCGGTTTACTCAAGCAAATAATAACATGCGCCGTGGAACAAGGTGAAAGGGTTCTTGTCACAGCACCTACCAATGCAGCTGTTGATAATATGGTTGAAAAGCTTTCAAATGTTGGAATAAATATTGTTCGAGTTGGAAATCCCGCTCGTATATCAAAAACAGTAGCATCAAAGTCCTTAGGAGAAATTGTAAATGCGAAGCTTGCAAGTTTTCGCGAAGAGTGTGAGAGGAAGAAATCTGATCTAAGGAAAGATCTAAGACAATGTTTGAGGGATGATTCATTAGCTGCAGGCATACGCCAACTTCTGAAACAGTTGGGAAAGTCGCTAAAGAAAAAGGAAAAGCAGACTATTATTGAAGTTCTATCTAGTGCTCAGGTTGTGCTTGCCACCAATACCGGAGCAGCCGATCCCATGATTCGAAAGCTAAATGCTTTTGACTTGGTTGTCATAGATGAAGCTGGACAGGCAATTGAACCGTCTTGCTGGATTCCTATATTGCAGGCGAAACGATGCATTCTTGTTGGTGATCAATGCCAACTAGCTCCTGTGATATTTTCTAGAAAGGCATTAGAAGGTGGTTTAGGAATATCGCTACTCGAGAGAGCTGCAACTCTGCATGAAGGGATTCTCACCACTAGGTTAACGACACAATACCGTATGAATGATGCCATTGCAAGTTGGGCTTCGAAGGAGATGTATGGAGGATTATTGAAGTCCTCCAAGACTGTCTTTTCTCATCTTCTTGTAGACTCTCCTTTTGTTAAGCCTACATGGATAACACAGTGTCCTCTACTACTTCTTGACACTCGAATGCCGTATGGAAGTCTTTCAATTGGTTGCGAAGAGCATCTAGATCAGGCTGGAACAGGCTCGTTGTATAATGAAGGAGAAGCTGATATAGTTTTGCAGCATGTATTTTCCTTAATTTATGCTGGTGTTAGCCCAAATGCTATTGTAGTTCAGTCCCCATATGTTGCTCAAGTTCAACTTTTGAGGGACATGCTTGACGGGGTTCCTGAAGCTGCCGGTACTGAAGTTTCCACAATTGATAGTTTTCAAGGTCGGGAAGCTGATGCTGTAATTTTATCAATGGTACGATCAAACACATTGGGAGCTGTCGGATTCCTTGGCGATAGCAGAAGAATCAACGTTGCCATCACAAGAGCGCGCAAGCATTTAGCTGTAGTCTGTGACAGCTCAACTATATGCCACAACACGTTCCTAGCAAGACTTATGCGCCATATTCGACACTTTGGTAGGGTGAAGCACGTAGAACCAGATAGTTTTGGAGGAGGGTTTGGACTTGGCATGAATCCAATGTTACCTTCTATGGATTAG
Protein sequence

>Msa0154720

MEATSTCFFCGRIPSKSKLASSSSFGSFCLLTRNNITTIMCKTSLKTHNRVVQNITNSNETKAPSTTKRRRRRRKNDAAAIEIQLPFENMNKNLHVHENIGDPIGWKDVGKSVVSWIRESMKSMAFEIASAELLEDLEFSEMKQRMGPGLTFVIQAQPYLNAVPMPLGLEVTCLKACTHYPTLFDHFQRELRDVLQDMQSKGLVEDWRQTQSWKLLKELANSAQHRAVARNVTQPKSVQGVLGMDRERVKVLQQRIDEFTQNMSELLNIERDVELEFTQEELDAVPKQDDASDPSKPIEFLVSHSQPQQELCDTICNLNAISTSTGLGGMHLVLFKIEGNHRLPPTTLSPGEMVCVRTCDSKGAVTTSCMQGVVENLGDDGYSITVALESRHGDPTFSKLFGKNVRIDRIQGLADTLTYERNCEALMLLQKNGLQKKNPSISVVATLFGEGEDAAWLEKNSLVDWEEEKTNGVLGSESFDKSQQRAIALGLNKKRPLLVIQGPPGTGKTGLLKQIITCAVEQGERVLVTAPTNAAVDNMVEKLSNVGINIVRVGNPARISKTVASKSLGEIVNAKLASFREECERKKSDLRKDLRQCLRDDSLAAGIRQLLKQLGKSLKKKEKQTIIEVLSSAQVVLATNTGAADPMIRKLNAFDLVVIDEAGQAIEPSCWIPILQAKRCILVGDQCQLAPVIFSRKALEGGLGISLLERAATLHEGILTTRLTTQYRMNDAIASWASKEMYGGLLKSSKTVFSHLLVDSPFVKPTWITQCPLLLLDTRMPYGSLSIGCEEHLDQAGTGSLYNEGEADIVLQHVFSLIYAGVSPNAIVVQSPYVAQVQLLRDMLDGVPEAAGTEVSTIDSFQGREADAVILSMVRSNTLGAVGFLGDSRRINVAITRARKHLAVVCDSSTICHNTFLARLMRHIRHFGRVKHVEPDSFGGGFGLGMNPMLPSMD*