Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0475330 | XP_003602850.1 | 95.107 | 327 | 8 | 2 | 1 | 325 | 1 | 321 | 0.0 | 641 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0475330 | sp|Q9C7T4|BH096_ARATH | 49.280 | 347 | 123 | 10 | 1 | 322 | 1 | 319 | 3.85e-90 | 275 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0475330 | F0V437 | 95.107 | 327 | 8 | 2 | 1 | 325 | 1 | 321 | 0.0 | 641 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0475330 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000370 | Msa0475330 | 0.806849 | 6.735863e-50 | -8.615850e-47 |
| Msa0006080 | Msa0475330 | 0.811597 | 6.466526e-51 | -8.615850e-47 |
| Msa0007810 | Msa0475330 | -0.809907 | 1.500322e-50 | -8.615850e-47 |
| Msa0009530 | Msa0475330 | -0.807977 | 3.883546e-50 | -8.615850e-47 |
| Msa0009560 | Msa0475330 | -0.804621 | 1.978582e-49 | -8.615850e-47 |
| Msa0011060 | Msa0475330 | -0.823195 | 1.578623e-53 | -8.615850e-47 |
| Msa0011100 | Msa0475330 | -0.821137 | 4.736797e-53 | -8.615850e-47 |
| Msa0013040 | Msa0475330 | 0.807041 | 6.134549e-50 | -8.615850e-47 |
| Msa0013270 | Msa0475330 | 0.846409 | 2.212028e-59 | -8.615850e-47 |
| Msa0014590 | Msa0475330 | 0.824104 | 9.672225e-54 | -8.615850e-47 |
| Msa0017710 | Msa0475330 | 0.823626 | 1.251385e-53 | -8.615850e-47 |
| Msa0024650 | Msa0475330 | 0.800087 | 1.698696e-48 | -8.615850e-47 |
| Msa0025570 | Msa0475330 | 0.815214 | 1.036842e-51 | -8.615850e-47 |
| Msa0025700 | Msa0475330 | 0.809112 | 2.222334e-50 | -8.615850e-47 |
| Msa0036810 | Msa0475330 | 0.819208 | 1.310107e-52 | -8.615850e-47 |
| Msa0037270 | Msa0475330 | -0.814827 | 1.263497e-51 | -8.615850e-47 |
| Msa0038150 | Msa0475330 | -0.806828 | 6.806291e-50 | -8.615850e-47 |
| Msa0040930 | Msa0475330 | 0.814048 | 1.878563e-51 | -8.615850e-47 |
| Msa0044530 | Msa0475330 | -0.801890 | 7.271576e-49 | -8.615850e-47 |
| Msa0044780 | Msa0475330 | -0.818154 | 2.272960e-52 | -8.615850e-47 |
| Msa0045620 | Msa0475330 | 0.806229 | 9.104367e-50 | -8.615850e-47 |
| Msa0045810 | Msa0475330 | 0.834309 | 3.228963e-56 | -8.615850e-47 |
| Msa0046200 | Msa0475330 | 0.817238 | 3.657014e-52 | -8.615850e-47 |
| Msa0047560 | Msa0475330 | -0.828974 | 6.671065e-55 | -8.615850e-47 |
| Msa0048410 | Msa0475330 | -0.817042 | 4.048120e-52 | -8.615850e-47 |
| Msa0054050 | Msa0475330 | 0.802146 | 6.443536e-49 | -8.615850e-47 |
| Msa0056230 | Msa0475330 | -0.812229 | 4.709937e-51 | -8.615850e-47 |
| Msa0062010 | Msa0475330 | 0.841196 | 5.500616e-58 | -8.615850e-47 |
| Msa0062190 | Msa0475330 | 0.834065 | 3.718377e-56 | -8.615850e-47 |
| Msa0063540 | Msa0475330 | 0.807201 | 5.674053e-50 | -8.615850e-47 |
| Msa0072390 | Msa0475330 | -0.800990 | 1.111826e-48 | -8.615850e-47 |
| Msa0073110 | Msa0475330 | 0.819799 | 9.606128e-53 | -8.615850e-47 |
| Msa0073270 | Msa0475330 | 0.821460 | 3.991396e-53 | -8.615850e-47 |
| Msa0079840 | Msa0475330 | -0.800005 | 1.765403e-48 | -8.615850e-47 |
| Msa0081120 | Msa0475330 | -0.822912 | 1.837937e-53 | -8.615850e-47 |
| Msa0085690 | Msa0475330 | -0.828698 | 7.779332e-55 | -8.615850e-47 |
| Msa0091090 | Msa0475330 | -0.803305 | 3.714048e-49 | -8.615850e-47 |
| Msa0099890 | Msa0475330 | 0.803647 | 3.154932e-49 | -8.615850e-47 |
| Msa0104900 | Msa0475330 | -0.801720 | 7.882051e-49 | -8.615850e-47 |
| Msa0105140 | Msa0475330 | -0.806721 | 7.170038e-50 | -8.615850e-47 |
| Msa0105590 | Msa0475330 | -0.820229 | 7.659427e-53 | -8.615850e-47 |
| Msa0106540 | Msa0475330 | 0.843884 | 1.064629e-58 | -8.615850e-47 |
| Msa0108350 | Msa0475330 | 0.801719 | 7.886765e-49 | -8.615850e-47 |
| Msa0121320 | Msa0475330 | 0.814432 | 1.545291e-51 | -8.615850e-47 |
| Msa0132080 | Msa0475330 | -0.853202 | 2.793118e-61 | -8.615850e-47 |
| Msa0136180 | Msa0475330 | -0.826174 | 3.135810e-54 | -8.615850e-47 |
| Msa0137010 | Msa0475330 | -0.808800 | 2.591418e-50 | -8.615850e-47 |
| Msa0141410 | Msa0475330 | 0.803543 | 3.315014e-49 | -8.615850e-47 |
| Msa0166180 | Msa0475330 | 0.810280 | 1.246876e-50 | -8.615850e-47 |
| Msa0173600 | Msa0475330 | -0.804171 | 2.455479e-49 | -8.615850e-47 |
| Msa0180210 | Msa0475330 | 0.822882 | 1.867787e-53 | -8.615850e-47 |
| Msa0183200 | Msa0475330 | -0.805887 | 1.074523e-49 | -8.615850e-47 |
| Msa0189150 | Msa0475330 | -0.809197 | 2.131682e-50 | -8.615850e-47 |
| Msa0190670 | Msa0475330 | 0.811272 | 7.607498e-51 | -8.615850e-47 |
| Msa0196260 | Msa0475330 | 0.834216 | 3.408008e-56 | -8.615850e-47 |
| Msa0206370 | Msa0475330 | 0.834744 | 2.511500e-56 | -8.615850e-47 |
| Msa0211460 | Msa0475330 | 0.823586 | 1.278837e-53 | -8.615850e-47 |
| Msa0212950 | Msa0475330 | -0.807654 | 4.548530e-50 | -8.615850e-47 |
| Msa0216150 | Msa0475330 | -0.807140 | 5.844483e-50 | -8.615850e-47 |
| Msa0220090 | Msa0475330 | 0.813936 | 1.988980e-51 | -8.615850e-47 |
| Msa0221460 | Msa0475330 | -0.804598 | 2.000809e-49 | -8.615850e-47 |
| Msa0225070 | Msa0475330 | -0.830010 | 3.735255e-55 | -8.615850e-47 |
| Msa0229350 | Msa0475330 | -0.808991 | 2.359639e-50 | -8.615850e-47 |
| Msa0235080 | Msa0475330 | 0.815302 | 9.913818e-52 | -8.615850e-47 |
| Msa0236940 | Msa0475330 | 0.811022 | 8.619384e-51 | -8.615850e-47 |
| Msa0238110 | Msa0475330 | 0.812099 | 5.028069e-51 | -8.615850e-47 |
| Msa0364910 | Msa0475330 | -0.822118 | 2.810258e-53 | -8.615850e-47 |
| Msa0370620 | Msa0475330 | 0.821164 | 4.671083e-53 | -8.615850e-47 |
| Msa0371350 | Msa0475330 | -0.826676 | 2.380608e-54 | -8.615850e-47 |
| Msa0379480 | Msa0475330 | 0.914430 | 1.934040e-84 | -8.615850e-47 |
| Msa0386880 | Msa0475330 | 0.805178 | 1.513330e-49 | -8.615850e-47 |
| Msa0386910 | Msa0475330 | 0.802177 | 6.347580e-49 | -8.615850e-47 |
| Msa0387630 | Msa0475330 | -0.803685 | 3.097504e-49 | -8.615850e-47 |
| Msa0396860 | Msa0475330 | 0.803777 | 2.964911e-49 | -8.615850e-47 |
| Msa0403740 | Msa0475330 | -0.828519 | 8.593300e-55 | -8.615850e-47 |
| Msa0404140 | Msa0475330 | 0.930382 | 1.776206e-93 | -8.615850e-47 |
| Msa0409500 | Msa0475330 | 0.801919 | 7.173812e-49 | -8.615850e-47 |
| Msa0412580 | Msa0475330 | -0.831272 | 1.833854e-55 | -8.615850e-47 |
| Msa0416340 | Msa0475330 | 0.801736 | 7.821288e-49 | -8.615850e-47 |
| Msa0419420 | Msa0475330 | -0.830685 | 2.555413e-55 | -8.615850e-47 |
| Msa0427260 | Msa0475330 | -0.821304 | 4.335118e-53 | -8.615850e-47 |
| Msa0428300 | Msa0475330 | -0.801018 | 1.097249e-48 | -8.615850e-47 |
| Msa0434820 | Msa0475330 | -0.815620 | 8.419750e-52 | -8.615850e-47 |
| Msa0437480 | Msa0475330 | 0.824141 | 9.478469e-54 | -8.615850e-47 |
| Msa0444210 | Msa0475330 | 0.820728 | 5.885074e-53 | -8.615850e-47 |
| Msa0454160 | Msa0475330 | 0.802329 | 5.906493e-49 | -8.615850e-47 |
| Msa0456450 | Msa0475330 | -0.831063 | 2.063460e-55 | -8.615850e-47 |
| Msa0457070 | Msa0475330 | -0.834268 | 3.306052e-56 | -8.615850e-47 |
| Msa0467170 | Msa0475330 | 0.804267 | 2.344890e-49 | -8.615850e-47 |
| Msa0467330 | Msa0475330 | 0.804233 | 2.383243e-49 | -8.615850e-47 |
| Msa0471390 | Msa0475330 | 0.800853 | 1.186275e-48 | -8.615850e-47 |
| Msa0475330 | Msa0484210 | -0.837588 | 4.757868e-57 | -8.615850e-47 |
| Msa0475330 | Msa0496070 | 0.807249 | 5.541818e-50 | -8.615850e-47 |
| Msa0475330 | Msa0519070 | -0.800051 | 1.727401e-48 | -8.615850e-47 |
| Msa0475330 | Msa0523720 | 0.804073 | 2.572949e-49 | -8.615850e-47 |
| Msa0475330 | Msa0548260 | -0.810555 | 1.087659e-50 | -8.615850e-47 |
| Msa0475330 | Msa0549960 | 0.829954 | 3.854919e-55 | -8.615850e-47 |
| Msa0475330 | Msa0565700 | 0.813771 | 2.162511e-51 | -8.615850e-47 |
| Msa0475330 | Msa0567330 | 0.833020 | 6.777696e-56 | -8.615850e-47 |
| Msa0475330 | Msa0567570 | 0.836329 | 9.973649e-57 | -8.615850e-47 |
| Msa0475330 | Msa0568460 | -0.826406 | 2.760580e-54 | -8.615850e-47 |
| Msa0475330 | Msa0572730 | -0.813881 | 2.044793e-51 | -8.615850e-47 |
| Msa0475330 | Msa0576320 | 0.831235 | 1.872477e-55 | -8.615850e-47 |
| Msa0475330 | Msa0576500 | -0.814058 | 1.869559e-51 | -8.615850e-47 |
| Msa0475330 | Msa0580410 | -0.806558 | 7.759223e-50 | -8.615850e-47 |
| Msa0475330 | Msa0580890 | -0.802559 | 5.296592e-49 | -8.615850e-47 |
| Msa0475330 | Msa0582270 | -0.814355 | 1.607438e-51 | -8.615850e-47 |
| Msa0475330 | Msa0583390 | 0.814858 | 1.243931e-51 | -8.615850e-47 |
| Msa0475330 | Msa0587730 | 0.801071 | 1.070409e-48 | -8.615850e-47 |
| Msa0475330 | Msa0603180 | -0.815136 | 1.079023e-51 | -8.615850e-47 |
| Msa0475330 | Msa0604190 | 0.814850 | 1.248433e-51 | -8.615850e-47 |
| Msa0475330 | Msa0606600 | 0.829559 | 4.810822e-55 | -8.615850e-47 |
| Msa0475330 | Msa0606820 | 0.811978 | 5.342855e-51 | -8.615850e-47 |
| Msa0475330 | Msa0610190 | 0.811782 | 5.894538e-51 | -8.615850e-47 |
| Msa0475330 | Msa0610240 | -0.829931 | 3.904600e-55 | -8.615850e-47 |
| Msa0475330 | Msa0615070 | 0.801442 | 8.985288e-49 | -8.615850e-47 |
| Msa0475330 | Msa0616890 | -0.803003 | 4.288622e-49 | -8.615850e-47 |
| Msa0475330 | Msa0618700 | 0.802115 | 6.539351e-49 | -8.615850e-47 |
| Msa0475330 | Msa0623310 | 0.814677 | 1.364066e-51 | -8.615850e-47 |
| Msa0475330 | Msa0629160 | 0.804838 | 1.782529e-49 | -8.615850e-47 |
| Msa0475330 | Msa0638300 | -0.817524 | 3.153618e-52 | -8.615850e-47 |
| Msa0475330 | Msa0645390 | 0.808540 | 2.945449e-50 | -8.615850e-47 |
| Msa0475330 | Msa0646010 | 0.837447 | 5.169237e-57 | -8.615850e-47 |
| Msa0475330 | Msa0646430 | 0.826080 | 3.301666e-54 | -8.615850e-47 |
| Msa0475330 | Msa0647300 | 0.832379 | 9.776987e-56 | -8.615850e-47 |
| Msa0475330 | Msa0649250 | -0.805619 | 1.222947e-49 | -8.615850e-47 |
| Msa0475330 | Msa0655430 | 0.800271 | 1.558765e-48 | -8.615850e-47 |
| Msa0475330 | Msa0658520 | -0.818532 | 1.865954e-52 | -8.615850e-47 |
| Msa0475330 | Msa0659020 | -0.842472 | 2.532275e-58 | -8.615850e-47 |
| Msa0475330 | Msa0684030 | -0.814175 | 1.760889e-51 | -8.615850e-47 |
| Msa0475330 | Msa0685390 | -0.809620 | 1.729116e-50 | -8.615850e-47 |
| Msa0475330 | Msa0686040 | 0.845809 | 3.220729e-59 | -8.615850e-47 |
| Msa0475330 | Msa0686830 | 0.830756 | 2.454472e-55 | -8.615850e-47 |
| Msa0475330 | Msa0687220 | 0.825316 | 5.010086e-54 | -8.615850e-47 |
| Msa0475330 | Msa0698110 | 0.808870 | 2.504673e-50 | -8.615850e-47 |
| Msa0475330 | Msa0699170 | 0.808281 | 3.345858e-50 | -8.615850e-47 |
| Msa0475330 | Msa0701800 | -0.802515 | 5.409714e-49 | -8.615850e-47 |
| Msa0475330 | Msa0702020 | -0.805570 | 1.252661e-49 | -8.615850e-47 |
| Msa0475330 | Msa0702690 | -0.824052 | 9.944257e-54 | -8.615850e-47 |
| Msa0475330 | Msa0703430 | -0.832055 | 1.175845e-55 | -8.615850e-47 |
| Msa0475330 | Msa0707880 | -0.800758 | 1.240202e-48 | -8.615850e-47 |
| Msa0475330 | Msa0711260 | 0.822116 | 2.813644e-53 | -8.615850e-47 |
| Msa0475330 | Msa0732970 | 0.837113 | 6.293981e-57 | -8.615850e-47 |
| Msa0475330 | Msa0738460 | -0.826131 | 3.209964e-54 | -8.615850e-47 |
| Msa0475330 | Msa0739720 | 0.834014 | 3.829087e-56 | -8.615850e-47 |
| Msa0475330 | Msa0742090 | -0.803309 | 3.707239e-49 | -8.615850e-47 |
| Msa0475330 | Msa0745140 | 0.813591 | 2.368887e-51 | -8.615850e-47 |
| Msa0475330 | Msa0758780 | -0.821989 | 3.011439e-53 | -8.615850e-47 |
| Msa0475330 | Msa0758810 | -0.821214 | 4.547571e-53 | -8.615850e-47 |
| Msa0475330 | Msa0758880 | -0.803088 | 4.119079e-49 | -8.615850e-47 |
| Msa0475330 | Msa0761830 | 0.839839 | 1.246168e-57 | -8.615850e-47 |
| Msa0475330 | Msa0769910 | -0.820618 | 6.237030e-53 | -8.615850e-47 |
| Msa0475330 | Msa0773960 | 0.833244 | 5.960335e-56 | -8.615850e-47 |
| Msa0475330 | Msa0775660 | 0.818191 | 2.229650e-52 | -8.615850e-47 |
| Msa0475330 | Msa0776640 | 0.810655 | 1.034777e-50 | -8.615850e-47 |
| Msa0475330 | Msa0790650 | -0.808248 | 3.399621e-50 | -8.615850e-47 |
| Msa0475330 | Msa0792410 | 0.813920 | 2.004902e-51 | -8.615850e-47 |
| Msa0475330 | Msa0794900 | -0.804217 | 2.401360e-49 | -8.615850e-47 |
| Msa0475330 | Msa0795910 | -0.805778 | 1.132815e-49 | -8.615850e-47 |
| Msa0475330 | Msa0801920 | -0.802035 | 6.790710e-49 | -8.615850e-47 |
| Msa0475330 | Msa0802950 | -0.801397 | 9.178198e-49 | -8.615850e-47 |
| Msa0475330 | Msa0804170 | 0.833040 | 6.698613e-56 | -8.615850e-47 |
| Msa0475330 | Msa0806930 | 0.824895 | 6.299918e-54 | -8.615850e-47 |
| Msa0475330 | Msa0807870 | -0.803884 | 2.817572e-49 | -8.615850e-47 |
| Msa0475330 | Msa0823310 | -0.818517 | 1.881412e-52 | -8.615850e-47 |
| Msa0475330 | Msa0825920 | 0.817460 | 3.260300e-52 | -8.615850e-47 |
| Msa0475330 | Msa0827340 | -0.801738 | 7.816581e-49 | -8.615850e-47 |
| Msa0475330 | Msa0829250 | -0.804634 | 1.966209e-49 | -8.615850e-47 |
| Msa0475330 | Msa0831890 | 0.825622 | 4.240712e-54 | -8.615850e-47 |
| Msa0475330 | Msa0838120 | -0.802073 | 6.668948e-49 | -8.615850e-47 |
| Msa0475330 | Msa0838620 | -0.845011 | 5.297052e-59 | -8.615850e-47 |
| Msa0475330 | Msa0838670 | -0.800539 | 1.374282e-48 | -8.615850e-47 |
| Msa0475330 | Msa0840520 | 0.801818 | 7.524793e-49 | -8.615850e-47 |
| Msa0475330 | Msa0842180 | 0.822774 | 1.979144e-53 | -8.615850e-47 |
| Msa0475330 | Msa0853590 | 0.812342 | 4.448726e-51 | -8.615850e-47 |
| Msa0475330 | Msa0862230 | -0.811117 | 8.220162e-51 | -8.615850e-47 |
| Msa0475330 | Msa0869660 | 0.810512 | 1.110765e-50 | -8.615850e-47 |
| Msa0475330 | Msa0880910 | 0.829734 | 4.361378e-55 | -8.615850e-47 |
| Msa0475330 | Msa0893840 | 0.802409 | 5.688261e-49 | -8.615850e-47 |
| Msa0475330 | Msa0896920 | 0.805383 | 1.371032e-49 | -8.615850e-47 |
| Msa0475330 | Msa0898830 | -0.856955 | 2.266953e-62 | -8.615850e-47 |
| Msa0475330 | Msa0928060 | -0.804651 | 1.950027e-49 | -8.615850e-47 |
| Msa0475330 | Msa0932140 | 0.831990 | 1.220171e-55 | -8.615850e-47 |
| Msa0475330 | Msa0932150 | 0.827449 | 1.554558e-54 | -8.615850e-47 |
| Msa0475330 | Msa0941150 | -0.806188 | 9.286502e-50 | -8.615850e-47 |
| Msa0475330 | Msa0964400 | -0.833937 | 4.001623e-56 | -8.615850e-47 |
| Msa0475330 | Msa0967780 | 0.824549 | 7.598387e-54 | -8.615850e-47 |
| Msa0475330 | Msa0967900 | -0.821165 | 4.666871e-53 | -8.615850e-47 |
| Msa0475330 | Msa0970270 | 0.824564 | 7.540567e-54 | -8.615850e-47 |
| Msa0475330 | Msa0998660 | -0.846232 | 2.472075e-59 | -8.615850e-47 |
| Msa0475330 | Msa1002550 | -0.805061 | 1.600763e-49 | -8.615850e-47 |
| Msa0475330 | Msa1002970 | -0.805145 | 1.537683e-49 | -8.615850e-47 |
| Msa0475330 | Msa1014550 | -0.815135 | 1.079364e-51 | -8.615850e-47 |
| Msa0475330 | Msa1025440 | -0.820900 | 5.372993e-53 | -8.615850e-47 |
| Msa0475330 | Msa1029820 | 0.823053 | 1.703780e-53 | -8.615850e-47 |
| Msa0475330 | Msa1036260 | -0.820144 | 8.008948e-53 | -8.615850e-47 |
| Msa0475330 | Msa1041060 | 0.829287 | 5.602090e-55 | -8.615850e-47 |
| Msa0475330 | Msa1055520 | -0.814342 | 1.617894e-51 | -8.615850e-47 |
| Msa0475330 | Msa1063210 | 0.815488 | 9.010635e-52 | -8.615850e-47 |
| Msa0475330 | Msa1068730 | 0.802711 | 4.928427e-49 | -8.615850e-47 |
| Msa0475330 | Msa1068940 | 0.817850 | 2.662624e-52 | -8.615850e-47 |
| Msa0475330 | Msa1070630 | -0.815836 | 7.538600e-52 | -8.615850e-47 |
| Msa0475330 | Msa1076830 | 0.803923 | 2.765106e-49 | -8.615850e-47 |
| Msa0475330 | Msa1078120 | -0.801415 | 9.100487e-49 | -8.615850e-47 |
| Msa0475330 | Msa1078590 | -0.823485 | 1.350540e-53 | -8.615850e-47 |
| Msa0475330 | Msa1078760 | -0.817504 | 3.187254e-52 | -8.615850e-47 |
| Msa0475330 | Msa1088400 | -0.825031 | 5.850641e-54 | -8.615850e-47 |
| Msa0475330 | Msa1093190 | -0.827544 | 1.475288e-54 | -8.615850e-47 |
| Msa0475330 | Msa1106680 | 0.813224 | 2.852759e-51 | -8.615850e-47 |
| Msa0475330 | Msa1106730 | -0.811754 | 5.978103e-51 | -8.615850e-47 |
| Msa0475330 | Msa1108560 | 0.826672 | 2.385868e-54 | -8.615850e-47 |
| Msa0475330 | Msa1122710 | -0.812205 | 4.766019e-51 | -8.615850e-47 |
| Msa0475330 | Msa1127200 | 0.845572 | 3.734755e-59 | -8.615850e-47 |
| Msa0475330 | Msa1129880 | -0.816379 | 5.699746e-52 | -8.615850e-47 |
| Msa0475330 | Msa1132880 | -0.807168 | 5.765191e-50 | -8.615850e-47 |
| Msa0475330 | Msa1143490 | 0.800813 | 1.208557e-48 | -8.615850e-47 |
| Msa0475330 | Msa1146980 | 0.806006 | 1.014306e-49 | -8.615850e-47 |
| Msa0475330 | Msa1147010 | 0.809403 | 1.924929e-50 | -8.615850e-47 |
| Msa0475330 | Msa1156430 | -0.816266 | 6.040992e-52 | -8.615850e-47 |
| Msa0475330 | Msa1156710 | 0.821948 | 3.077765e-53 | -8.615850e-47 |
| Msa0475330 | Msa1156730 | 0.802765 | 4.803595e-49 | -8.615850e-47 |
| Msa0475330 | Msa1158450 | -0.807966 | 3.904592e-50 | -8.615850e-47 |
| Msa0475330 | Msa1165460 | 0.869320 | 3.382005e-66 | -8.615850e-47 |
| Msa0475330 | Msa1169590 | -0.818392 | 2.007528e-52 | -8.615850e-47 |
| Msa0475330 | Msa1181090 | 0.800173 | 1.631464e-48 | -8.615850e-47 |
| Msa0475330 | Msa1186260 | 0.800338 | 1.510568e-48 | -8.615850e-47 |
| Msa0475330 | Msa1186340 | 0.817289 | 3.562668e-52 | -8.615850e-47 |
| Msa0475330 | Msa1190350 | -0.809622 | 1.728026e-50 | -8.615850e-47 |
| Msa0475330 | Msa1191530 | -0.832745 | 7.930760e-56 | -8.615850e-47 |
| Msa0475330 | Msa1199540 | -0.800948 | 1.134367e-48 | -8.615850e-47 |
| Msa0475330 | Msa1204900 | -0.806849 | 6.734925e-50 | -8.615850e-47 |
| Msa0475330 | Msa1205270 | -0.844522 | 7.176257e-59 | -8.615850e-47 |
| Msa0475330 | Msa1206920 | 0.801866 | 7.357461e-49 | -8.615850e-47 |
| Msa0475330 | Msa1209990 | -0.814473 | 1.513733e-51 | -8.615850e-47 |
| Msa0475330 | Msa1212150 | -0.803849 | 2.864317e-49 | -8.615850e-47 |
| Msa0475330 | Msa1217890 | 0.822728 | 2.028463e-53 | -8.615850e-47 |
| Msa0475330 | Msa1223540 | 0.820394 | 7.021336e-53 | -8.615850e-47 |
| Msa0475330 | Msa1223620 | 0.808077 | 3.696976e-50 | -8.615850e-47 |
| Msa0475330 | Msa1223960 | 0.800033 | 1.741963e-48 | -8.615850e-47 |
| Msa0475330 | Msa1225890 | 0.811680 | 6.201543e-51 | -8.615850e-47 |
| Msa0475330 | Msa1236860 | -0.831253 | 1.853989e-55 | -8.615850e-47 |
| Msa0475330 | Msa1255030 | -0.812825 | 3.488802e-51 | -8.615850e-47 |
| Msa0475330 | Msa1255710 | 0.811319 | 7.429614e-51 | -8.615850e-47 |
| Msa0475330 | Msa1255740 | 0.815909 | 7.260798e-52 | -8.615850e-47 |
| Msa0475330 | Msa1256490 | -0.803621 | 3.194195e-49 | -8.615850e-47 |
| Msa0475330 | Msa1257200 | 0.801158 | 1.027209e-48 | -8.615850e-47 |
| Msa0475330 | Msa1263110 | 0.807069 | 6.051119e-50 | -8.615850e-47 |
| Msa0475330 | Msa1263520 | 0.809303 | 2.022989e-50 | -8.615850e-47 |
| Msa0475330 | Msa1266120 | -0.824123 | 9.574064e-54 | -8.615850e-47 |
| Msa0475330 | Msa1267990 | 0.806876 | 6.648352e-50 | -8.615850e-47 |
| Msa0475330 | Msa1273320 | 0.823790 | 1.145626e-53 | -8.615850e-47 |
| Msa0475330 | Msa1279200 | -0.800591 | 1.341239e-48 | -8.615850e-47 |
| Msa0475330 | Msa1281780 | 0.811453 | 6.950152e-51 | -8.615850e-47 |
| Msa0475330 | Msa1286860 | -0.820248 | 7.581072e-53 | -8.615850e-47 |
| Msa0475330 | Msa1287100 | -0.811466 | 6.902721e-51 | -8.615850e-47 |
| Msa0475330 | Msa1295210 | -0.824866 | 6.400780e-54 | -8.615850e-47 |
| Msa0475330 | Msa1297220 | -0.824536 | 7.654247e-54 | -8.615850e-47 |
| Msa0475330 | Msa1298480 | -0.813972 | 1.952383e-51 | -8.615850e-47 |
| Msa0475330 | Msa1311370 | 0.802515 | 5.408025e-49 | -8.615850e-47 |
| Msa0475330 | Msa1317240 | -0.812769 | 3.588360e-51 | -8.615850e-47 |
| Msa0475330 | Msa1319190 | 0.800906 | 1.156713e-48 | -8.615850e-47 |
| Msa0475330 | Msa1321970 | 0.804808 | 1.808550e-49 | -8.615850e-47 |
| Msa0475330 | Msa1322500 | 0.802500 | 5.447794e-49 | -8.615850e-47 |
| Msa0475330 | Msa1323260 | -0.819807 | 9.566611e-53 | -8.615850e-47 |
| Msa0475330 | Msa1338600 | -0.807445 | 5.038465e-50 | -8.615850e-47 |
| Msa0475330 | Msa1341710 | -0.805485 | 1.304989e-49 | -8.615850e-47 |
| Msa0475330 | Msa1342360 | -0.829435 | 5.155379e-55 | -8.615850e-47 |
| Msa0475330 | Msa1342760 | 0.821171 | 4.652868e-53 | -8.615850e-47 |
| Msa0475330 | Msa1343450 | -0.823244 | 1.537348e-53 | -8.615850e-47 |
| Msa0475330 | Msa1352630 | -0.813910 | 2.014610e-51 | -8.615850e-47 |
| Msa0475330 | Msa1361980 | 0.829911 | 3.949285e-55 | -8.615850e-47 |
| Msa0475330 | Msa1368930 | 0.801314 | 9.546344e-49 | -8.615850e-47 |
| Msa0475330 | Msa1371800 | 0.808495 | 3.011458e-50 | -8.615850e-47 |
| Msa0475330 | Msa1376070 | 0.803939 | 2.744170e-49 | -8.615850e-47 |
| Msa0475330 | Msa1376310 | 0.810305 | 1.231377e-50 | -8.615850e-47 |
| Msa0475330 | Msa1377980 | -0.807304 | 5.395925e-50 | -8.615850e-47 |
| Msa0475330 | Msa1380740 | 0.821884 | 3.184516e-53 | -8.615850e-47 |
| Msa0475330 | Msa1383500 | 0.809000 | 2.348995e-50 | -8.615850e-47 |
| Msa0475330 | Msa1384410 | -0.837569 | 4.810051e-57 | -8.615850e-47 |
| Msa0475330 | Msa1384970 | -0.816172 | 6.340884e-52 | -8.615850e-47 |
| Msa0475330 | Msa1386910 | -0.802729 | 4.886826e-49 | -8.615850e-47 |
| Msa0475330 | Msa1395380 | -0.800878 | 1.172022e-48 | -8.615850e-47 |
| Msa0475330 | Msa1405830 | 0.843199 | 1.622892e-58 | -8.615850e-47 |
| Msa0475330 | Msa1407810 | 0.831592 | 1.529774e-55 | -8.615850e-47 |
| Msa0475330 | Msa1408280 | -0.805715 | 1.167748e-49 | -8.615850e-47 |
| Msa0475330 | Msa1413020 | 0.835147 | 1.987489e-56 | -8.615850e-47 |
| Msa0475330 | Msa1437780 | 0.829764 | 4.289292e-55 | -8.615850e-47 |
| Msa0475330 | Msa1441450 | 0.815033 | 1.137449e-51 | -8.615850e-47 |
| Msa0475330 | Msa1450630 | -0.814265 | 1.682818e-51 | -8.615850e-47 |
| Msa0475330 | Msa1452560 | -0.805799 | 1.121410e-49 | -8.615850e-47 |
| Msa0475330 | Msa1454300 | -0.800569 | 1.355105e-48 | -8.615850e-47 |
| Msa0475330 | Msa1455360 | 0.819277 | 1.263947e-52 | -8.615850e-47 |
| Msa0475330 | Msa1458270 | 0.808957 | 2.399264e-50 | -8.615850e-47 |
| Msa0475330 | Msa1459610 | 0.811842 | 5.717598e-51 | -8.615850e-47 |
| Msa0475330 | Msa1461660 | 0.843530 | 1.324134e-58 | -8.615850e-47 |
| Msa0475330 | Msa1462610 | 0.810984 | 8.782649e-51 | -8.615850e-47 |
| Msa0475330 | Msa1464470 | -0.815899 | 7.297571e-52 | -8.615850e-47 |
| Msa0244820 | Msa0475330 | -0.804949 | 1.689607e-49 | -8.615850e-47 |
| Msa0253230 | Msa0475330 | -0.807907 | 4.017796e-50 | -8.615850e-47 |
| Msa0258010 | Msa0475330 | 0.801738 | 7.815359e-49 | -8.615850e-47 |
| Msa0260980 | Msa0475330 | 0.802584 | 5.233828e-49 | -8.615850e-47 |
| Msa0261350 | Msa0475330 | -0.804071 | 2.575985e-49 | -8.615850e-47 |
| Msa0261400 | Msa0475330 | 0.805695 | 1.179198e-49 | -8.615850e-47 |
| Msa0266140 | Msa0475330 | -0.836041 | 1.180757e-56 | -8.615850e-47 |
| Msa0267450 | Msa0475330 | -0.821220 | 4.533752e-53 | -8.615850e-47 |
| Msa0267510 | Msa0475330 | -0.823340 | 1.460344e-53 | -8.615850e-47 |
| Msa0270730 | Msa0475330 | -0.816961 | 4.221732e-52 | -8.615850e-47 |
| Msa0279810 | Msa0475330 | 0.832344 | 9.975347e-56 | -8.615850e-47 |
| Msa0290800 | Msa0475330 | 0.819963 | 8.810828e-53 | -8.615850e-47 |
| Msa0299030 | Msa0475330 | 0.808052 | 3.743303e-50 | -8.615850e-47 |
| Msa0299130 | Msa0475330 | -0.822416 | 2.396760e-53 | -8.615850e-47 |
| Msa0300670 | Msa0475330 | -0.802225 | 6.206845e-49 | -8.615850e-47 |
| Msa0304060 | Msa0475330 | -0.832450 | 9.388934e-56 | -8.615850e-47 |
| Msa0307630 | Msa0475330 | 0.818214 | 2.203481e-52 | -8.615850e-47 |
| Msa0310130 | Msa0475330 | 0.801737 | 7.819257e-49 | -8.615850e-47 |
| Msa0311540 | Msa0475330 | 0.800884 | 1.169076e-48 | -8.615850e-47 |
| Msa0316020 | Msa0475330 | 0.816554 | 5.209120e-52 | -8.615850e-47 |
| Msa0319220 | Msa0475330 | 0.829276 | 5.634636e-55 | -8.615850e-47 |
| Msa0328870 | Msa0475330 | 0.815950 | 7.108823e-52 | -8.615850e-47 |
| Msa0331070 | Msa0475330 | -0.820358 | 7.155219e-53 | -8.615850e-47 |
| Msa0335340 | Msa0475330 | 0.800573 | 1.352620e-48 | -8.615850e-47 |
| Msa0337760 | Msa0475330 | -0.803928 | 2.758096e-49 | -8.615850e-47 |
| Msa0340700 | Msa0475330 | -0.802904 | 4.494923e-49 | -8.615850e-47 |
| Msa0349910 | Msa0475330 | 0.808751 | 2.655573e-50 | -8.615850e-47 |
| Msa0349930 | Msa0475330 | 0.834696 | 2.580942e-56 | -8.615850e-47 |
| Msa0354840 | Msa0475330 | 0.819969 | 8.783358e-53 | -8.615850e-47 |
| Msa0364030 | Msa0475330 | -0.828763 | 7.502657e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0475330 | MtrunA17_Chr3g0132471 | 95.107 | 327 | 8 | 2 | 1 | 325 | 1 | 321 | 0.0 | 641 |
| Msa0475330 | MtrunA17_Chr5g0426851 | 56.402 | 328 | 105 | 10 | 1 | 321 | 1 | 297 | 7.32e-108 | 316 |
| Msa0475330 | MtrunA17_Chr7g0273081 | 51.250 | 320 | 131 | 6 | 1 | 319 | 14 | 309 | 6.96e-97 | 289 |
| Msa0475330 | MtrunA17_Chr1g0191571 | 50.755 | 331 | 140 | 6 | 1 | 319 | 14 | 333 | 7.66e-94 | 282 |
| Msa0475330 | MtrunA17_Chr8g0366551 | 57.209 | 215 | 75 | 3 | 111 | 319 | 113 | 316 | 3.79e-80 | 246 |
| Msa0475330 | MtrunA17_Chr8g0345871 | 52.427 | 206 | 84 | 3 | 111 | 316 | 170 | 361 | 2.25e-58 | 192 |
| Msa0475330 | MtrunA17_Chr0c01g0489461 | 47.556 | 225 | 93 | 6 | 103 | 313 | 176 | 389 | 2.71e-56 | 187 |
| Msa0475330 | MtrunA17_Chr2g0287761 | 41.146 | 192 | 102 | 4 | 122 | 311 | 1 | 183 | 7.56e-40 | 139 |
| Msa0475330 | MtrunA17_Chr1g0158941 | 36.437 | 247 | 127 | 7 | 85 | 311 | 54 | 290 | 3.94e-36 | 132 |
| Msa0475330 | MtrunA17_Chr3g0126381 | 27.778 | 198 | 105 | 5 | 151 | 311 | 1 | 197 | 2.01e-15 | 73.9 |
| Msa0475330 | MtrunA17_Chr1g0211081 | 27.014 | 211 | 120 | 7 | 125 | 314 | 319 | 516 | 1.44e-13 | 71.2 |
| Msa0475330 | MtrunA17_Chr3g0126361 | 57.143 | 56 | 20 | 1 | 102 | 153 | 77 | 132 | 1.22e-12 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0475330 | AT1G72210.1 | 49.280 | 347 | 123 | 10 | 1 | 322 | 1 | 319 | 3.91e-91 | 275 |
| Msa0475330 | AT1G22490.1 | 46.084 | 332 | 137 | 9 | 1 | 319 | 1 | 303 | 4.33e-86 | 261 |
| Msa0475330 | AT1G72210.2 | 48.113 | 318 | 112 | 10 | 1 | 293 | 1 | 290 | 6.14e-76 | 236 |
| Msa0475330 | AT1G22490.2 | 44.194 | 310 | 131 | 9 | 1 | 297 | 1 | 281 | 5.61e-71 | 223 |
| Msa0475330 | AT4G01460.1 | 41.784 | 213 | 118 | 1 | 110 | 322 | 103 | 309 | 8.77e-53 | 176 |
| Msa0475330 | AT4G01460.2 | 41.784 | 213 | 118 | 1 | 110 | 322 | 103 | 309 | 8.77e-53 | 176 |
| Msa0475330 | AT5G65320.1 | 47.059 | 204 | 100 | 3 | 118 | 319 | 98 | 295 | 1.78e-52 | 175 |
| Msa0475330 | AT3G24140.2 | 44.196 | 224 | 108 | 4 | 101 | 313 | 176 | 393 | 1.31e-51 | 176 |
| Msa0475330 | AT3G24140.1 | 44.196 | 224 | 108 | 4 | 101 | 313 | 176 | 393 | 1.77e-51 | 176 |
| Msa0475330 | AT2G46810.2 | 45.545 | 202 | 93 | 3 | 113 | 313 | 112 | 297 | 2.25e-50 | 169 |
| Msa0475330 | AT2G46810.3 | 45.545 | 202 | 93 | 3 | 113 | 313 | 172 | 357 | 7.19e-50 | 170 |
| Msa0475330 | AT2G46810.1 | 45.545 | 202 | 93 | 3 | 113 | 313 | 184 | 369 | 7.75e-50 | 170 |
| Msa0475330 | AT5G46690.1 | 43.802 | 242 | 87 | 7 | 111 | 319 | 77 | 302 | 7.43e-49 | 166 |
| Msa0475330 | AT5G65320.2 | 47.568 | 185 | 90 | 2 | 110 | 293 | 90 | 268 | 9.89e-48 | 162 |
| Msa0475330 | AT3G61950.2 | 44.608 | 204 | 95 | 3 | 111 | 313 | 116 | 302 | 8.65e-47 | 160 |
| Msa0475330 | AT3G61950.1 | 44.608 | 204 | 95 | 3 | 111 | 313 | 167 | 353 | 1.46e-46 | 161 |
| Msa0475330 | AT2G46810.4 | 40.435 | 230 | 92 | 4 | 113 | 313 | 112 | 325 | 9.11e-45 | 155 |
| Msa0475330 | AT3G61950.6 | 45.882 | 170 | 75 | 2 | 111 | 280 | 116 | 268 | 1.89e-42 | 149 |
| Msa0475330 | AT3G61950.3 | 45.882 | 170 | 75 | 2 | 111 | 280 | 167 | 319 | 3.19e-42 | 149 |
| Msa0475330 | AT5G46690.2 | 43.056 | 216 | 74 | 7 | 111 | 293 | 77 | 276 | 1.06e-38 | 139 |
| Msa0475330 | AT3G06120.1 | 36.683 | 199 | 108 | 5 | 122 | 311 | 1 | 190 | 4.28e-32 | 119 |
| Msa0475330 | AT5G53210.1 | 66.154 | 65 | 22 | 0 | 120 | 184 | 100 | 164 | 4.84e-23 | 98.6 |
| Msa0475330 | AT5G53210.2 | 66.154 | 65 | 22 | 0 | 120 | 184 | 100 | 164 | 5.29e-23 | 98.2 |
| Msa0475330 | AT3G61950.4 | 69.767 | 43 | 13 | 0 | 111 | 153 | 167 | 209 | 8.88e-14 | 69.7 |
| Msa0475330 | AT3G61950.5 | 69.767 | 43 | 13 | 0 | 111 | 153 | 167 | 209 | 8.88e-14 | 69.7 |
Find 83 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCCCATTGTTTCTGTTCT+TGG | 0.146665 | 3_3:+78458964 | None:intergenic |
| AGAACAACATTTACAGTCTA+TGG | 0.205160 | 3_3:-78459132 | Msa0475330:CDS |
| TGATCAACGGTGCAGATTTC+AGG | 0.214308 | 3_3:+78460337 | None:intergenic |
| TTCTCCATCGTTAAGTGATT+TGG | 0.220241 | 3_3:-78458461 | Msa0475330:three_prime_UTR |
| GGTGACCAAGCTTCTATTAT+TGG | 0.242168 | 3_3:-78459182 | Msa0475330:CDS |
| TTGTTGGGTTACAAAATCTT+AGG | 0.275677 | 3_3:-78458854 | Msa0475330:CDS |
| AACAAAATCTCCATGCAAAC+TGG | 0.290252 | 3_3:-78460411 | Msa0475330:CDS |
| CTGGGATTCTTGTTCTGTTA+AGG | 0.317030 | 3_3:-78460392 | Msa0475330:CDS |
| TGTTACCACGGTCGATGATA+TGG | 0.322275 | 3_3:-78458811 | Msa0475330:CDS |
| CTGCTGTGAATCAACTATTA+AGG | 0.338632 | 3_3:-78458593 | Msa0475330:CDS |
| CTAGTTGAAATGTGTTAATT+AGG | 0.354436 | 3_3:-78458314 | Msa0475330:three_prime_UTR |
| TTTAAGCCTATGTTCTCGTT+TGG | 0.392393 | 3_3:+78459086 | None:intergenic |
| TGCCTTCTTCTTATGTTCAA+AGG | 0.395209 | 3_3:-78460123 | Msa0475330:CDS |
| TCTTCTGATAGCAGCATTTG+TGG | 0.399537 | 3_3:-78458353 | Msa0475330:three_prime_UTR |
| GTTGATAAGCCAGTTCTTGT+TGG | 0.407779 | 3_3:+78458565 | None:intergenic |
| GTGTTTATTGAGAATATTAG+AGG | 0.408257 | 3_3:-78458422 | Msa0475330:three_prime_UTR |
| CTTTGATCAAGCAGACCTAT+TGG | 0.418017 | 3_3:+78458220 | None:intergenic |
| GAGAACATAGGCTTAAATAA+TGG | 0.421439 | 3_3:-78459080 | Msa0475330:CDS |
| AACTTATGAAGATTGTTGTT+GGG | 0.423130 | 3_3:-78458869 | Msa0475330:CDS |
| GCCTTCTTCTTATGTTCAAA+GGG | 0.428871 | 3_3:-78460122 | Msa0475330:intron |
| TTCAATAATAAGCTACCAAT+AGG | 0.438365 | 3_3:-78458235 | Msa0475330:three_prime_UTR |
| CAACTTATGAAGATTGTTGT+TGG | 0.446451 | 3_3:-78458870 | Msa0475330:CDS |
| TTCTGTTAAGGATCATCAAT+GGG | 0.447040 | 3_3:-78460380 | Msa0475330:CDS |
| TGCAGTTGCTGTTGCTTCCA+CGG | 0.462288 | 3_3:+78460285 | None:intergenic |
| GTTCATTGTTGATGATTCCT+AGG | 0.463558 | 3_3:+78460434 | None:intergenic |
| GAACAACATTTACAGTCTAT+GGG | 0.463577 | 3_3:-78459131 | Msa0475330:CDS |
| GTTCTGTTAAGGATCATCAA+TGG | 0.470917 | 3_3:-78460381 | Msa0475330:CDS |
| TGATTGGAGCAGGTAGAGGA+GGG | 0.476683 | 3_3:-78458648 | Msa0475330:intron |
| ACAATCTTCATAAGTTGTCC+TGG | 0.483622 | 3_3:+78458876 | None:intergenic |
| AAGGACGGTCCAACAAGAAC+TGG | 0.486926 | 3_3:-78458574 | Msa0475330:CDS |
| TTGATTGGAGCAGGTAGAGG+AGG | 0.489389 | 3_3:-78458649 | Msa0475330:intron |
| CTCCTCCAATAATAGAAGCT+TGG | 0.501188 | 3_3:+78459177 | None:intergenic |
| TCTTTGTAACTATATGTGAA+TGG | 0.514401 | 3_3:+78460523 | None:intergenic |
| AACAAGAATCCCAGTTTGCA+TGG | 0.514438 | 3_3:+78460401 | None:intergenic |
| AAAGTGAAGAATTCAGCAAA+AGG | 0.515194 | 3_3:+78459053 | None:intergenic |
| GGTAACATTAAGATGAAGAA+TGG | 0.520032 | 3_3:+78458827 | None:intergenic |
| GTTGCTTCCACGGTGGAAGA+AGG | 0.520106 | 3_3:+78460295 | None:intergenic |
| GACCAAGCTTCTATTATTGG+AGG | 0.520738 | 3_3:-78459179 | Msa0475330:CDS |
| AAGAGGAGATTGAAAATCAA+AGG | 0.536216 | 3_3:-78460219 | Msa0475330:CDS |
| ACCTGTGAGGTTCATACTGT+TGG | 0.537508 | 3_3:+78458279 | None:intergenic |
| GAACAAGAGAATGTTCTCCT+AGG | 0.539799 | 3_3:-78460451 | Msa0475330:CDS |
| CTAATTAACACATTTCAACT+AGG | 0.541454 | 3_3:+78458315 | None:intergenic |
| TTACCAAGAACAGAAACAAT+GGG | 0.542341 | 3_3:-78458967 | Msa0475330:CDS |
| ACCCTTTGAACATAAGAAGA+AGG | 0.558671 | 3_3:+78460121 | None:intergenic |
| TCTTTACTCAGTTAGTGTCA+AGG | 0.560473 | 3_3:-78458787 | Msa0475330:intron |
| ATTACCAAGAACAGAAACAA+TGG | 0.564607 | 3_3:-78458968 | Msa0475330:CDS |
| GATTGGAGCAGGTAGAGGAG+GGG | 0.565920 | 3_3:-78458647 | Msa0475330:intron |
| TGTTTATTGAGAATATTAGA+GGG | 0.569855 | 3_3:-78458421 | Msa0475330:three_prime_UTR |
| AATAATGGCTCTTGAAACTG+TGG | 0.572614 | 3_3:-78460563 | None:intergenic |
| AAATCACTTAACGATGGAGA+AGG | 0.575886 | 3_3:+78458463 | None:intergenic |
| ATGTGAATGGATCTTGTTGT+GGG | 0.578863 | 3_3:+78460536 | None:intergenic |
| ACAAAATCTCCATGCAAACT+GGG | 0.583052 | 3_3:-78460410 | Msa0475330:CDS |
| CACCGTTGATCAAACTATCA+CGG | 0.598610 | 3_3:-78460326 | Msa0475330:CDS |
| AGGAGCAATAAACTTTGTGA+AGG | 0.602345 | 3_3:-78459159 | Msa0475330:CDS |
| CAAGAGTGCAAAGAACAAAG+AGG | 0.609385 | 3_3:-78460236 | Msa0475330:CDS |
| ACCAACAGTATGAACCTCAC+AGG | 0.609690 | 3_3:-78458280 | Msa0475330:three_prime_UTR |
| AAAGAACCAAACGAGAACAT+AGG | 0.609692 | 3_3:-78459092 | Msa0475330:CDS |
| AACGGTGCAGATTTCAGGAG+AGG | 0.610812 | 3_3:+78460342 | None:intergenic |
| GGGGAGTCAGCTGAATAGTG+TGG | 0.613845 | 3_3:-78458628 | Msa0475330:CDS |
| TCCACGGTGGAAGAAGGAGG+AGG | 0.617851 | 3_3:+78460301 | None:intergenic |
| TCTTCATCTTAATGTTACCA+CGG | 0.620808 | 3_3:-78458823 | Msa0475330:CDS |
| CAACAACAACAACGTCACAA+TGG | 0.620930 | 3_3:-78459000 | Msa0475330:CDS |
| TTTATTGAGAATATTAGAGG+GGG | 0.621085 | 3_3:-78458419 | Msa0475330:three_prime_UTR |
| AGAACAGAAACAATGGGCTG+TGG | 0.630328 | 3_3:-78458961 | Msa0475330:CDS |
| AACAACATTTACAGTCTATG+GGG | 0.630582 | 3_3:-78459130 | Msa0475330:CDS |
| CAACAGCAACTGCAACGTGT+AGG | 0.632313 | 3_3:-78460276 | Msa0475330:CDS |
| GCTTCCACGGTGGAAGAAGG+AGG | 0.636333 | 3_3:+78460298 | None:intergenic |
| AGCCGTGATAGTTTGATCAA+CGG | 0.636568 | 3_3:+78460324 | None:intergenic |
| GTTTATTGAGAATATTAGAG+GGG | 0.638772 | 3_3:-78458420 | Msa0475330:three_prime_UTR |
| GGCAGACATTGAAGTTACAA+TGG | 0.641899 | 3_3:-78458940 | Msa0475330:CDS |
| GTGAAGAATTCAGCAAAAGG+TGG | 0.646381 | 3_3:+78459056 | None:intergenic |
| ATATCCAAATCACTTAACGA+TGG | 0.651147 | 3_3:+78458457 | None:intergenic |
| TATGTGAATGGATCTTGTTG+TGG | 0.651367 | 3_3:+78460535 | None:intergenic |
| ACAACATTTACAGTCTATGG+GGG | 0.663491 | 3_3:-78459129 | Msa0475330:CDS |
| GAATAGTGTGGATGAAATTG+CGG | 0.673702 | 3_3:-78458616 | Msa0475330:CDS |
| TGTGAATCAACTATTAAGGA+CGG | 0.674482 | 3_3:-78458589 | Msa0475330:CDS |
| TGACTATGATCATCTTCATG+CGG | 0.681857 | 3_3:-78460476 | Msa0475330:CDS |
| GTTGCACTTGTTGTGTACTG+AGG | 0.689048 | 3_3:+78459029 | None:intergenic |
| TCCTCCTCCTTCTTCCACCG+TGG | 0.691097 | 3_3:-78460302 | Msa0475330:CDS |
| AAGAACCATATCATCGACCG+TGG | 0.707791 | 3_3:+78458806 | None:intergenic |
| CAACATTTACAGTCTATGGG+GGG | 0.730568 | 3_3:-78459128 | Msa0475330:CDS |
| GTAATTCACATAGACCTGTG+AGG | 0.732658 | 3_3:+78458266 | None:intergenic |
| AGTTGCTGTTGCTTCCACGG+TGG | 0.802421 | 3_3:+78460288 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTAAAAAAATTAAA+TGG | + | chr3_3:78460066-78460085 | None:intergenic | 0.0% |
| !!! | ATTTTTTTAAAAAAATTAAA+TGG | + | chr3_3:78460066-78460085 | None:intergenic | 0.0% |
| !! | AAATATAATTAGAAAGTTAA+CGG | + | chr3_3:78458877-78458896 | None:intergenic | 10.0% |
| !!! | AATTTTTATTTATTGATTGT+TGG | - | chr3_3:78459186-78459205 | Msa0475330:intron | 10.0% |
| !!! | TAAATATGCATTTTTTATAA+TGG | + | chr3_3:78459365-78459384 | None:intergenic | 10.0% |
| !!! | ATTAGAAATTTTAAGTAATT+TGG | - | chr3_3:78460088-78460107 | Msa0475330:intron | 10.0% |
| !!! | GTTAATTAATTTATTAGTTT+TGG | - | chr3_3:78460110-78460129 | Msa0475330:intron | 10.0% |
| !! | AAATATAATTAGAAAGTTAA+CGG | + | chr3_3:78458877-78458896 | None:intergenic | 10.0% |
| !!! | AATTTTTATTTATTGATTGT+TGG | - | chr3_3:78459186-78459205 | Msa0475330:intron | 10.0% |
| !!! | TAAATATGCATTTTTTATAA+TGG | + | chr3_3:78459365-78459384 | None:intergenic | 10.0% |
| !!! | ATTAGAAATTTTAAGTAATT+TGG | - | chr3_3:78460088-78460107 | Msa0475330:intron | 10.0% |
| !!! | GTTAATTAATTTATTAGTTT+TGG | - | chr3_3:78460110-78460129 | Msa0475330:intron | 10.0% |
| !! | AATATAATTAGAAAGTTAAC+GGG | + | chr3_3:78458876-78458895 | None:intergenic | 15.0% |
| !! | TATTTGCATATTTATTTATG+TGG | - | chr3_3:78459161-78459180 | Msa0475330:CDS | 15.0% |
| !! | TTAAGCTCTTAAAAAAAATT+AGG | + | chr3_3:78459240-78459259 | None:intergenic | 15.0% |
| !!! | TACAATTTTTTTTTTTGCAA+AGG | - | chr3_3:78459407-78459426 | Msa0475330:intron | 15.0% |
| !!! | TAAAAATTATTTATTTCTGC+TGG | - | chr3_3:78460037-78460056 | Msa0475330:intron | 15.0% |
| !!! | ATTTTAAAGTAAATTAAGCA+AGG | + | chr3_3:78460294-78460313 | None:intergenic | 15.0% |
| !! | AATATAATTAGAAAGTTAAC+GGG | + | chr3_3:78458876-78458895 | None:intergenic | 15.0% |
| !! | TATTTGCATATTTATTTATG+TGG | - | chr3_3:78459161-78459180 | Msa0475330:CDS | 15.0% |
| !! | TTAAGCTCTTAAAAAAAATT+AGG | + | chr3_3:78459240-78459259 | None:intergenic | 15.0% |
| !!! | TACAATTTTTTTTTTTGCAA+AGG | - | chr3_3:78459407-78459426 | Msa0475330:intron | 15.0% |
| !!! | TAAAAATTATTTATTTCTGC+TGG | - | chr3_3:78460037-78460056 | Msa0475330:intron | 15.0% |
| !!! | ATTTTAAAGTAAATTAAGCA+AGG | + | chr3_3:78460294-78460313 | None:intergenic | 15.0% |
| !!! | ATTTGTTTTACTTATGATAG+AGG | - | chr3_3:78458957-78458976 | Msa0475330:CDS | 20.0% |
| !! | AATTGTTATGTGAGTTAAAA+TGG | - | chr3_3:78459528-78459547 | Msa0475330:intron | 20.0% |
| !!! | TTTTTTCAATCAAATACACA+TGG | + | chr3_3:78459584-78459603 | None:intergenic | 20.0% |
| !! | TGTATTTGATTGAAAAAACA+GGG | - | chr3_3:78459586-78459605 | Msa0475330:intron | 20.0% |
| !! | TGTTTATTGAGAATATTAGA+GGG | - | chr3_3:78460368-78460387 | Msa0475330:CDS | 20.0% |
| !!! | ATTTGTTTTACTTATGATAG+AGG | - | chr3_3:78458957-78458976 | Msa0475330:CDS | 20.0% |
| !! | AATTGTTATGTGAGTTAAAA+TGG | - | chr3_3:78459528-78459547 | Msa0475330:intron | 20.0% |
| !!! | TTTTTTCAATCAAATACACA+TGG | + | chr3_3:78459584-78459603 | None:intergenic | 20.0% |
| !! | TGTATTTGATTGAAAAAACA+GGG | - | chr3_3:78459586-78459605 | Msa0475330:intron | 20.0% |
| !! | TGTTTATTGAGAATATTAGA+GGG | - | chr3_3:78460368-78460387 | Msa0475330:CDS | 20.0% |
| ! | TCTTTGTAACTATATGTGAA+TGG | + | chr3_3:78458269-78458288 | None:intergenic | 25.0% |
| ! | CATTCAAAGTGAAAATTGAA+GGG | + | chr3_3:78458905-78458924 | None:intergenic | 25.0% |
| ! | ACATTCAAAGTGAAAATTGA+AGG | + | chr3_3:78458906-78458925 | None:intergenic | 25.0% |
| !! | ATTTTCACTTTGAATGTATG+TGG | - | chr3_3:78458909-78458928 | Msa0475330:CDS | 25.0% |
| !! | TTTTCACTTTGAATGTATGT+GGG | - | chr3_3:78458910-78458929 | Msa0475330:CDS | 25.0% |
| !! | AAGTTGTCTTTAAAGAATTG+TGG | - | chr3_3:78459024-78459043 | Msa0475330:CDS | 25.0% |
| !! | AGTTGTCTTTAAAGAATTGT+GGG | - | chr3_3:78459025-78459044 | Msa0475330:CDS | 25.0% |
| ! | AGCTAACACTCAATAAAAAT+TGG | - | chr3_3:78459054-78459073 | Msa0475330:CDS | 25.0% |
| ! | ACACTAGTAGTACATAAAAA+GGG | - | chr3_3:78459273-78459292 | Msa0475330:intron | 25.0% |
| !! | CTTGCTATGATAAAAGATTA+TGG | + | chr3_3:78459335-78459354 | None:intergenic | 25.0% |
| ! | GTGTATTTGATTGAAAAAAC+AGG | - | chr3_3:78459585-78459604 | Msa0475330:intron | 25.0% |
| !! | AACTTATGAAGATTGTTGTT+GGG | - | chr3_3:78459920-78459939 | Msa0475330:intron | 25.0% |
| ! | GTGTTTATTGAGAATATTAG+AGG | - | chr3_3:78460367-78460386 | Msa0475330:CDS | 25.0% |
| ! | GTTTATTGAGAATATTAGAG+GGG | - | chr3_3:78460369-78460388 | Msa0475330:CDS | 25.0% |
| ! | TTTATTGAGAATATTAGAGG+GGG | - | chr3_3:78460370-78460389 | Msa0475330:CDS | 25.0% |
| ! | CTAATTAACACATTTCAACT+AGG | + | chr3_3:78460477-78460496 | None:intergenic | 25.0% |
| ! | CTAGTTGAAATGTGTTAATT+AGG | - | chr3_3:78460475-78460494 | Msa0475330:CDS | 25.0% |
| ! | TTCAATAATAAGCTACCAAT+AGG | - | chr3_3:78460554-78460573 | Msa0475330:CDS | 25.0% |
| ! | TCTTTGTAACTATATGTGAA+TGG | + | chr3_3:78458269-78458288 | None:intergenic | 25.0% |
| ! | CATTCAAAGTGAAAATTGAA+GGG | + | chr3_3:78458905-78458924 | None:intergenic | 25.0% |
| ! | ACATTCAAAGTGAAAATTGA+AGG | + | chr3_3:78458906-78458925 | None:intergenic | 25.0% |
| !! | ATTTTCACTTTGAATGTATG+TGG | - | chr3_3:78458909-78458928 | Msa0475330:CDS | 25.0% |
| !! | TTTTCACTTTGAATGTATGT+GGG | - | chr3_3:78458910-78458929 | Msa0475330:CDS | 25.0% |
| !! | AAGTTGTCTTTAAAGAATTG+TGG | - | chr3_3:78459024-78459043 | Msa0475330:CDS | 25.0% |
| !! | AGTTGTCTTTAAAGAATTGT+GGG | - | chr3_3:78459025-78459044 | Msa0475330:CDS | 25.0% |
| ! | AGCTAACACTCAATAAAAAT+TGG | - | chr3_3:78459054-78459073 | Msa0475330:CDS | 25.0% |
| ! | ACACTAGTAGTACATAAAAA+GGG | - | chr3_3:78459273-78459292 | Msa0475330:intron | 25.0% |
| !! | CTTGCTATGATAAAAGATTA+TGG | + | chr3_3:78459335-78459354 | None:intergenic | 25.0% |
| ! | GTGTATTTGATTGAAAAAAC+AGG | - | chr3_3:78459585-78459604 | Msa0475330:intron | 25.0% |
| !! | AACTTATGAAGATTGTTGTT+GGG | - | chr3_3:78459920-78459939 | Msa0475330:intron | 25.0% |
| ! | GTGTTTATTGAGAATATTAG+AGG | - | chr3_3:78460367-78460386 | Msa0475330:CDS | 25.0% |
| ! | GTTTATTGAGAATATTAGAG+GGG | - | chr3_3:78460369-78460388 | Msa0475330:CDS | 25.0% |
| ! | TTTATTGAGAATATTAGAGG+GGG | - | chr3_3:78460370-78460389 | Msa0475330:CDS | 25.0% |
| ! | CTAATTAACACATTTCAACT+AGG | + | chr3_3:78460477-78460496 | None:intergenic | 25.0% |
| ! | CTAGTTGAAATGTGTTAATT+AGG | - | chr3_3:78460475-78460494 | Msa0475330:CDS | 25.0% |
| ! | TTCAATAATAAGCTACCAAT+AGG | - | chr3_3:78460554-78460573 | Msa0475330:CDS | 25.0% |
| TTCTGTTAAGGATCATCAAT+GGG | - | chr3_3:78458409-78458428 | Msa0475330:three_prime_UTR | 30.0% | |
| AAGAGGAGATTGAAAATCAA+AGG | - | chr3_3:78458570-78458589 | Msa0475330:CDS | 30.0% | |
| TACTTATGATAGAGGAAAGA+TGG | - | chr3_3:78458965-78458984 | Msa0475330:CDS | 30.0% | |
| GACACATAAATGCAAATCTA+TGG | - | chr3_3:78459076-78459095 | Msa0475330:CDS | 30.0% | |
| GACACTAGTAGTACATAAAA+AGG | - | chr3_3:78459272-78459291 | Msa0475330:intron | 30.0% | |
| AGAACAACATTTACAGTCTA+TGG | - | chr3_3:78459657-78459676 | Msa0475330:intron | 30.0% | |
| GAACAACATTTACAGTCTAT+GGG | - | chr3_3:78459658-78459677 | Msa0475330:intron | 30.0% | |
| AACAACATTTACAGTCTATG+GGG | - | chr3_3:78459659-78459678 | Msa0475330:intron | 30.0% | |
| !! | TTGGTTCTTTCGTTTTCTTT+TGG | + | chr3_3:78459687-78459706 | None:intergenic | 30.0% |
| GAGAACATAGGCTTAAATAA+TGG | - | chr3_3:78459709-78459728 | Msa0475330:intron | 30.0% | |
| AAAGTGAAGAATTCAGCAAA+AGG | + | chr3_3:78459739-78459758 | None:intergenic | 30.0% | |
| ATTACCAAGAACAGAAACAA+TGG | - | chr3_3:78459821-78459840 | Msa0475330:intron | 30.0% | |
| TTACCAAGAACAGAAACAAT+GGG | - | chr3_3:78459822-78459841 | Msa0475330:intron | 30.0% | |
| ! | CTTGGATAGAATTTTCATGT+TGG | + | chr3_3:78459887-78459906 | None:intergenic | 30.0% |
| ATTCTATCCAAGAAAAAACC+AGG | - | chr3_3:78459895-78459914 | Msa0475330:intron | 30.0% | |
| CAACTTATGAAGATTGTTGT+TGG | - | chr3_3:78459919-78459938 | Msa0475330:intron | 30.0% | |
| TTGTTGGGTTACAAAATCTT+AGG | - | chr3_3:78459935-78459954 | Msa0475330:intron | 30.0% | |
| GGTAACATTAAGATGAAGAA+TGG | + | chr3_3:78459965-78459984 | None:intergenic | 30.0% | |
| TCTTCATCTTAATGTTACCA+CGG | - | chr3_3:78459966-78459985 | Msa0475330:intron | 30.0% | |
| !!! | AGTTTTGGGTATGAATTGAT+TGG | - | chr3_3:78460125-78460144 | Msa0475330:CDS | 30.0% |
| TGTGAATCAACTATTAAGGA+CGG | - | chr3_3:78460200-78460219 | Msa0475330:CDS | 30.0% | |
| ATATCCAAATCACTTAACGA+TGG | + | chr3_3:78460335-78460354 | None:intergenic | 30.0% | |
| TTCTGTTAAGGATCATCAAT+GGG | - | chr3_3:78458409-78458428 | Msa0475330:three_prime_UTR | 30.0% | |
| AAGAGGAGATTGAAAATCAA+AGG | - | chr3_3:78458570-78458589 | Msa0475330:CDS | 30.0% | |
| TACTTATGATAGAGGAAAGA+TGG | - | chr3_3:78458965-78458984 | Msa0475330:CDS | 30.0% | |
| GACACATAAATGCAAATCTA+TGG | - | chr3_3:78459076-78459095 | Msa0475330:CDS | 30.0% | |
| GACACTAGTAGTACATAAAA+AGG | - | chr3_3:78459272-78459291 | Msa0475330:intron | 30.0% | |
| AGAACAACATTTACAGTCTA+TGG | - | chr3_3:78459657-78459676 | Msa0475330:intron | 30.0% | |
| GAACAACATTTACAGTCTAT+GGG | - | chr3_3:78459658-78459677 | Msa0475330:intron | 30.0% | |
| AACAACATTTACAGTCTATG+GGG | - | chr3_3:78459659-78459678 | Msa0475330:intron | 30.0% | |
| !! | TTGGTTCTTTCGTTTTCTTT+TGG | + | chr3_3:78459687-78459706 | None:intergenic | 30.0% |
| GAGAACATAGGCTTAAATAA+TGG | - | chr3_3:78459709-78459728 | Msa0475330:intron | 30.0% | |
| AAAGTGAAGAATTCAGCAAA+AGG | + | chr3_3:78459739-78459758 | None:intergenic | 30.0% | |
| ATTACCAAGAACAGAAACAA+TGG | - | chr3_3:78459821-78459840 | Msa0475330:intron | 30.0% | |
| TTACCAAGAACAGAAACAAT+GGG | - | chr3_3:78459822-78459841 | Msa0475330:intron | 30.0% | |
| ! | CTTGGATAGAATTTTCATGT+TGG | + | chr3_3:78459887-78459906 | None:intergenic | 30.0% |
| ATTCTATCCAAGAAAAAACC+AGG | - | chr3_3:78459895-78459914 | Msa0475330:intron | 30.0% | |
| CAACTTATGAAGATTGTTGT+TGG | - | chr3_3:78459919-78459938 | Msa0475330:intron | 30.0% | |
| TTGTTGGGTTACAAAATCTT+AGG | - | chr3_3:78459935-78459954 | Msa0475330:intron | 30.0% | |
| GGTAACATTAAGATGAAGAA+TGG | + | chr3_3:78459965-78459984 | None:intergenic | 30.0% | |
| TCTTCATCTTAATGTTACCA+CGG | - | chr3_3:78459966-78459985 | Msa0475330:intron | 30.0% | |
| !!! | AGTTTTGGGTATGAATTGAT+TGG | - | chr3_3:78460125-78460144 | Msa0475330:CDS | 30.0% |
| TGTGAATCAACTATTAAGGA+CGG | - | chr3_3:78460200-78460219 | Msa0475330:CDS | 30.0% | |
| ATATCCAAATCACTTAACGA+TGG | + | chr3_3:78460335-78460354 | None:intergenic | 30.0% | |
| ! | ATGTGAATGGATCTTGTTGT+GGG | + | chr3_3:78458256-78458275 | None:intergenic | 35.0% |
| TATGTGAATGGATCTTGTTG+TGG | + | chr3_3:78458257-78458276 | None:intergenic | 35.0% | |
| TGACTATGATCATCTTCATG+CGG | - | chr3_3:78458313-78458332 | Msa0475330:three_prime_UTR | 35.0% | |
| !! | GTTCATTGTTGATGATTCCT+AGG | + | chr3_3:78458358-78458377 | None:intergenic | 35.0% |
| AACAAAATCTCCATGCAAAC+TGG | - | chr3_3:78458378-78458397 | Msa0475330:three_prime_UTR | 35.0% | |
| ACAAAATCTCCATGCAAACT+GGG | - | chr3_3:78458379-78458398 | Msa0475330:three_prime_UTR | 35.0% | |
| GTTCTGTTAAGGATCATCAA+TGG | - | chr3_3:78458408-78458427 | Msa0475330:three_prime_UTR | 35.0% | |
| TGCCTTCTTCTTATGTTCAA+AGG | - | chr3_3:78458666-78458685 | Msa0475330:intron | 35.0% | |
| GCCTTCTTCTTATGTTCAAA+GGG | - | chr3_3:78458667-78458686 | Msa0475330:intron | 35.0% | |
| ACCCTTTGAACATAAGAAGA+AGG | + | chr3_3:78458671-78458690 | None:intergenic | 35.0% | |
| AGGAGCAATAAACTTTGTGA+AGG | - | chr3_3:78459630-78459649 | Msa0475330:intron | 35.0% | |
| ACAACATTTACAGTCTATGG+GGG | - | chr3_3:78459660-78459679 | Msa0475330:intron | 35.0% | |
| AAAGAACCAAACGAGAACAT+AGG | - | chr3_3:78459697-78459716 | Msa0475330:intron | 35.0% | |
| TTTAAGCCTATGTTCTCGTT+TGG | + | chr3_3:78459706-78459725 | None:intergenic | 35.0% | |
| !!! | AAGTTGTCCTGGTTTTTTCT+TGG | + | chr3_3:78459905-78459924 | None:intergenic | 35.0% |
| ACAATCTTCATAAGTTGTCC+TGG | + | chr3_3:78459916-78459935 | None:intergenic | 35.0% | |
| TCTTTACTCAGTTAGTGTCA+AGG | - | chr3_3:78460002-78460021 | Msa0475330:intron | 35.0% | |
| GAATAGTGTGGATGAAATTG+CGG | - | chr3_3:78460173-78460192 | Msa0475330:CDS | 35.0% | |
| CTGCTGTGAATCAACTATTA+AGG | - | chr3_3:78460196-78460215 | Msa0475330:CDS | 35.0% | |
| AAATCACTTAACGATGGAGA+AGG | + | chr3_3:78460329-78460348 | None:intergenic | 35.0% | |
| TTCTCCATCGTTAAGTGATT+TGG | - | chr3_3:78460328-78460347 | Msa0475330:CDS | 35.0% | |
| ! | ATGTGAATGGATCTTGTTGT+GGG | + | chr3_3:78458256-78458275 | None:intergenic | 35.0% |
| TATGTGAATGGATCTTGTTG+TGG | + | chr3_3:78458257-78458276 | None:intergenic | 35.0% | |
| TGACTATGATCATCTTCATG+CGG | - | chr3_3:78458313-78458332 | Msa0475330:three_prime_UTR | 35.0% | |
| !! | GTTCATTGTTGATGATTCCT+AGG | + | chr3_3:78458358-78458377 | None:intergenic | 35.0% |
| AACAAAATCTCCATGCAAAC+TGG | - | chr3_3:78458378-78458397 | Msa0475330:three_prime_UTR | 35.0% | |
| ACAAAATCTCCATGCAAACT+GGG | - | chr3_3:78458379-78458398 | Msa0475330:three_prime_UTR | 35.0% | |
| GTTCTGTTAAGGATCATCAA+TGG | - | chr3_3:78458408-78458427 | Msa0475330:three_prime_UTR | 35.0% | |
| TGCCTTCTTCTTATGTTCAA+AGG | - | chr3_3:78458666-78458685 | Msa0475330:intron | 35.0% | |
| GCCTTCTTCTTATGTTCAAA+GGG | - | chr3_3:78458667-78458686 | Msa0475330:intron | 35.0% | |
| ACCCTTTGAACATAAGAAGA+AGG | + | chr3_3:78458671-78458690 | None:intergenic | 35.0% | |
| AGGAGCAATAAACTTTGTGA+AGG | - | chr3_3:78459630-78459649 | Msa0475330:intron | 35.0% | |
| ACAACATTTACAGTCTATGG+GGG | - | chr3_3:78459660-78459679 | Msa0475330:intron | 35.0% | |
| AAAGAACCAAACGAGAACAT+AGG | - | chr3_3:78459697-78459716 | Msa0475330:intron | 35.0% | |
| TTTAAGCCTATGTTCTCGTT+TGG | + | chr3_3:78459706-78459725 | None:intergenic | 35.0% | |
| !!! | AAGTTGTCCTGGTTTTTTCT+TGG | + | chr3_3:78459905-78459924 | None:intergenic | 35.0% |
| ACAATCTTCATAAGTTGTCC+TGG | + | chr3_3:78459916-78459935 | None:intergenic | 35.0% | |
| TCTTTACTCAGTTAGTGTCA+AGG | - | chr3_3:78460002-78460021 | Msa0475330:intron | 35.0% | |
| GAATAGTGTGGATGAAATTG+CGG | - | chr3_3:78460173-78460192 | Msa0475330:CDS | 35.0% | |
| CTGCTGTGAATCAACTATTA+AGG | - | chr3_3:78460196-78460215 | Msa0475330:CDS | 35.0% | |
| AAATCACTTAACGATGGAGA+AGG | + | chr3_3:78460329-78460348 | None:intergenic | 35.0% | |
| TTCTCCATCGTTAAGTGATT+TGG | - | chr3_3:78460328-78460347 | Msa0475330:CDS | 35.0% | |
| GAACAAGAGAATGTTCTCCT+AGG | - | chr3_3:78458338-78458357 | Msa0475330:three_prime_UTR | 40.0% | |
| AACAAGAATCCCAGTTTGCA+TGG | + | chr3_3:78458391-78458410 | None:intergenic | 40.0% | |
| CTGGGATTCTTGTTCTGTTA+AGG | - | chr3_3:78458397-78458416 | Msa0475330:three_prime_UTR | 40.0% | |
| CACCGTTGATCAAACTATCA+CGG | - | chr3_3:78458463-78458482 | Msa0475330:three_prime_UTR | 40.0% | |
| AGCCGTGATAGTTTGATCAA+CGG | + | chr3_3:78458468-78458487 | None:intergenic | 40.0% | |
| ! | CAAGAGTGCAAAGAACAAAG+AGG | - | chr3_3:78458553-78458572 | Msa0475330:exon | 40.0% |
| CACTTTGAATGTATGTGGGT+AGG | - | chr3_3:78458914-78458933 | Msa0475330:CDS | 40.0% | |
| !!! | TCTATGGAAGTGCCGTTTTT+TGG | - | chr3_3:78459092-78459111 | Msa0475330:CDS | 40.0% |
| !!! | CTATGGAAGTGCCGTTTTTT+GGG | - | chr3_3:78459093-78459112 | Msa0475330:CDS | 40.0% |
| CCTAAAGCTCACCCAAAAAA+CGG | + | chr3_3:78459107-78459126 | None:intergenic | 40.0% | |
| GGTGACCAAGCTTCTATTAT+TGG | - | chr3_3:78459607-78459626 | Msa0475330:intron | 40.0% | |
| GACCAAGCTTCTATTATTGG+AGG | - | chr3_3:78459610-78459629 | Msa0475330:intron | 40.0% | |
| CTCCTCCAATAATAGAAGCT+TGG | + | chr3_3:78459615-78459634 | None:intergenic | 40.0% | |
| CAACATTTACAGTCTATGGG+GGG | - | chr3_3:78459661-78459680 | Msa0475330:intron | 40.0% | |
| GTGAAGAATTCAGCAAAAGG+TGG | + | chr3_3:78459736-78459755 | None:intergenic | 40.0% | |
| CAACAACAACAACGTCACAA+TGG | - | chr3_3:78459789-78459808 | Msa0475330:intron | 40.0% | |
| GGCAGACATTGAAGTTACAA+TGG | - | chr3_3:78459849-78459868 | Msa0475330:intron | 40.0% | |
| ! | GTTGATAAGCCAGTTCTTGT+TGG | + | chr3_3:78460227-78460246 | None:intergenic | 40.0% |
| TGAGAATATTAGAGGGGGTA+AGG | - | chr3_3:78460375-78460394 | Msa0475330:CDS | 40.0% | |
| TCTTCTGATAGCAGCATTTG+TGG | - | chr3_3:78460436-78460455 | Msa0475330:CDS | 40.0% | |
| GTAATTCACATAGACCTGTG+AGG | + | chr3_3:78460526-78460545 | None:intergenic | 40.0% | |
| GAACAAGAGAATGTTCTCCT+AGG | - | chr3_3:78458338-78458357 | Msa0475330:three_prime_UTR | 40.0% | |
| AACAAGAATCCCAGTTTGCA+TGG | + | chr3_3:78458391-78458410 | None:intergenic | 40.0% | |
| CTGGGATTCTTGTTCTGTTA+AGG | - | chr3_3:78458397-78458416 | Msa0475330:three_prime_UTR | 40.0% | |
| CACCGTTGATCAAACTATCA+CGG | - | chr3_3:78458463-78458482 | Msa0475330:three_prime_UTR | 40.0% | |
| AGCCGTGATAGTTTGATCAA+CGG | + | chr3_3:78458468-78458487 | None:intergenic | 40.0% | |
| ! | CAAGAGTGCAAAGAACAAAG+AGG | - | chr3_3:78458553-78458572 | Msa0475330:exon | 40.0% |
| CACTTTGAATGTATGTGGGT+AGG | - | chr3_3:78458914-78458933 | Msa0475330:CDS | 40.0% | |
| !!! | TCTATGGAAGTGCCGTTTTT+TGG | - | chr3_3:78459092-78459111 | Msa0475330:CDS | 40.0% |
| !!! | CTATGGAAGTGCCGTTTTTT+GGG | - | chr3_3:78459093-78459112 | Msa0475330:CDS | 40.0% |
| CCTAAAGCTCACCCAAAAAA+CGG | + | chr3_3:78459107-78459126 | None:intergenic | 40.0% | |
| GGTGACCAAGCTTCTATTAT+TGG | - | chr3_3:78459607-78459626 | Msa0475330:intron | 40.0% | |
| GACCAAGCTTCTATTATTGG+AGG | - | chr3_3:78459610-78459629 | Msa0475330:intron | 40.0% | |
| CTCCTCCAATAATAGAAGCT+TGG | + | chr3_3:78459615-78459634 | None:intergenic | 40.0% | |
| CAACATTTACAGTCTATGGG+GGG | - | chr3_3:78459661-78459680 | Msa0475330:intron | 40.0% | |
| GTGAAGAATTCAGCAAAAGG+TGG | + | chr3_3:78459736-78459755 | None:intergenic | 40.0% | |
| CAACAACAACAACGTCACAA+TGG | - | chr3_3:78459789-78459808 | Msa0475330:intron | 40.0% | |
| GGCAGACATTGAAGTTACAA+TGG | - | chr3_3:78459849-78459868 | Msa0475330:intron | 40.0% | |
| ! | GTTGATAAGCCAGTTCTTGT+TGG | + | chr3_3:78460227-78460246 | None:intergenic | 40.0% |
| TGAGAATATTAGAGGGGGTA+AGG | - | chr3_3:78460375-78460394 | Msa0475330:CDS | 40.0% | |
| TCTTCTGATAGCAGCATTTG+TGG | - | chr3_3:78460436-78460455 | Msa0475330:CDS | 40.0% | |
| GTAATTCACATAGACCTGTG+AGG | + | chr3_3:78460526-78460545 | None:intergenic | 40.0% | |
| TGATCAACGGTGCAGATTTC+AGG | + | chr3_3:78458455-78458474 | None:intergenic | 45.0% | |
| !!! | CCGTTTTTTGGGTGAGCTTT+AGG | - | chr3_3:78459104-78459123 | Msa0475330:CDS | 45.0% |
| !! | TGGGTGAGCTTTAGGTTGTT+TGG | - | chr3_3:78459112-78459131 | Msa0475330:CDS | 45.0% |
| !! | GTTGCACTTGTTGTGTACTG+AGG | + | chr3_3:78459763-78459782 | None:intergenic | 45.0% |
| !! | CAGCCCATTGTTTCTGTTCT+TGG | + | chr3_3:78459828-78459847 | None:intergenic | 45.0% |
| !! | AGAACAGAAACAATGGGCTG+TGG | - | chr3_3:78459828-78459847 | Msa0475330:intron | 45.0% |
| TGTTACCACGGTCGATGATA+TGG | - | chr3_3:78459978-78459997 | Msa0475330:intron | 45.0% | |
| AAGAACCATATCATCGACCG+TGG | + | chr3_3:78459986-78460005 | None:intergenic | 45.0% | |
| GGGTATGAATTGATTGGAGC+AGG | - | chr3_3:78460131-78460150 | Msa0475330:CDS | 45.0% | |
| GAATTGATTGGAGCAGGTAG+AGG | - | chr3_3:78460137-78460156 | Msa0475330:CDS | 45.0% | |
| ACCAACAGTATGAACCTCAC+AGG | - | chr3_3:78460509-78460528 | Msa0475330:CDS | 45.0% | |
| ACCTGTGAGGTTCATACTGT+TGG | + | chr3_3:78460513-78460532 | None:intergenic | 45.0% | |
| TGATCAACGGTGCAGATTTC+AGG | + | chr3_3:78458455-78458474 | None:intergenic | 45.0% | |
| !!! | CCGTTTTTTGGGTGAGCTTT+AGG | - | chr3_3:78459104-78459123 | Msa0475330:CDS | 45.0% |
| !! | TGGGTGAGCTTTAGGTTGTT+TGG | - | chr3_3:78459112-78459131 | Msa0475330:CDS | 45.0% |
| !! | GTTGCACTTGTTGTGTACTG+AGG | + | chr3_3:78459763-78459782 | None:intergenic | 45.0% |
| !! | CAGCCCATTGTTTCTGTTCT+TGG | + | chr3_3:78459828-78459847 | None:intergenic | 45.0% |
| !! | AGAACAGAAACAATGGGCTG+TGG | - | chr3_3:78459828-78459847 | Msa0475330:intron | 45.0% |
| TGTTACCACGGTCGATGATA+TGG | - | chr3_3:78459978-78459997 | Msa0475330:intron | 45.0% | |
| AAGAACCATATCATCGACCG+TGG | + | chr3_3:78459986-78460005 | None:intergenic | 45.0% | |
| GGGTATGAATTGATTGGAGC+AGG | - | chr3_3:78460131-78460150 | Msa0475330:CDS | 45.0% | |
| GAATTGATTGGAGCAGGTAG+AGG | - | chr3_3:78460137-78460156 | Msa0475330:CDS | 45.0% | |
| ACCAACAGTATGAACCTCAC+AGG | - | chr3_3:78460509-78460528 | Msa0475330:CDS | 45.0% | |
| ACCTGTGAGGTTCATACTGT+TGG | + | chr3_3:78460513-78460532 | None:intergenic | 45.0% | |
| !!! | ATTTTAAATTTACTTAATTA+TGG | - | chr3_3:78458850-78458869 | Msa0475330:CDS | 5.0% |
| !!! | TTAATTAATTTATTAGTTTT+GGG | - | chr3_3:78460111-78460130 | Msa0475330:intron | 5.0% |
| !!! | ATTTTAAATTTACTTAATTA+TGG | - | chr3_3:78458850-78458869 | Msa0475330:CDS | 5.0% |
| !!! | TTAATTAATTTATTAGTTTT+GGG | - | chr3_3:78460111-78460130 | Msa0475330:intron | 5.0% |
| AACGGTGCAGATTTCAGGAG+AGG | + | chr3_3:78458450-78458469 | None:intergenic | 50.0% | |
| ! | TGCAGTTGCTGTTGCTTCCA+CGG | + | chr3_3:78458507-78458526 | None:intergenic | 50.0% |
| CAACAGCAACTGCAACGTGT+AGG | - | chr3_3:78458513-78458532 | Msa0475330:three_prime_UTR | 50.0% | |
| TTGATTGGAGCAGGTAGAGG+AGG | - | chr3_3:78460140-78460159 | Msa0475330:CDS | 50.0% | |
| TGATTGGAGCAGGTAGAGGA+GGG | - | chr3_3:78460141-78460160 | Msa0475330:CDS | 50.0% | |
| AAGGACGGTCCAACAAGAAC+TGG | - | chr3_3:78460215-78460234 | Msa0475330:CDS | 50.0% | |
| AACGGTGCAGATTTCAGGAG+AGG | + | chr3_3:78458450-78458469 | None:intergenic | 50.0% | |
| ! | TGCAGTTGCTGTTGCTTCCA+CGG | + | chr3_3:78458507-78458526 | None:intergenic | 50.0% |
| CAACAGCAACTGCAACGTGT+AGG | - | chr3_3:78458513-78458532 | Msa0475330:three_prime_UTR | 50.0% | |
| TTGATTGGAGCAGGTAGAGG+AGG | - | chr3_3:78460140-78460159 | Msa0475330:CDS | 50.0% | |
| TGATTGGAGCAGGTAGAGGA+GGG | - | chr3_3:78460141-78460160 | Msa0475330:CDS | 50.0% | |
| AAGGACGGTCCAACAAGAAC+TGG | - | chr3_3:78460215-78460234 | Msa0475330:CDS | 50.0% | |
| GTTGCTTCCACGGTGGAAGA+AGG | + | chr3_3:78458497-78458516 | None:intergenic | 55.0% | |
| ! | AGTTGCTGTTGCTTCCACGG+TGG | + | chr3_3:78458504-78458523 | None:intergenic | 55.0% |
| GATTGGAGCAGGTAGAGGAG+GGG | - | chr3_3:78460142-78460161 | Msa0475330:CDS | 55.0% | |
| GGGGAGTCAGCTGAATAGTG+TGG | - | chr3_3:78460161-78460180 | Msa0475330:CDS | 55.0% | |
| GTTGCTTCCACGGTGGAAGA+AGG | + | chr3_3:78458497-78458516 | None:intergenic | 55.0% | |
| ! | AGTTGCTGTTGCTTCCACGG+TGG | + | chr3_3:78458504-78458523 | None:intergenic | 55.0% |
| GATTGGAGCAGGTAGAGGAG+GGG | - | chr3_3:78460142-78460161 | Msa0475330:CDS | 55.0% | |
| GGGGAGTCAGCTGAATAGTG+TGG | - | chr3_3:78460161-78460180 | Msa0475330:CDS | 55.0% | |
| TCCTCCTCCTTCTTCCACCG+TGG | - | chr3_3:78458487-78458506 | Msa0475330:three_prime_UTR | 60.0% | |
| TCCACGGTGGAAGAAGGAGG+AGG | + | chr3_3:78458491-78458510 | None:intergenic | 60.0% | |
| GCTTCCACGGTGGAAGAAGG+AGG | + | chr3_3:78458494-78458513 | None:intergenic | 60.0% | |
| TCCTCCTCCTTCTTCCACCG+TGG | - | chr3_3:78458487-78458506 | Msa0475330:three_prime_UTR | 60.0% | |
| TCCACGGTGGAAGAAGGAGG+AGG | + | chr3_3:78458491-78458510 | None:intergenic | 60.0% | |
| GCTTCCACGGTGGAAGAAGG+AGG | + | chr3_3:78458494-78458513 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 78458230 | 78460581 | 78458230 | ID=Msa0475330;Name=Msa0475330 |
| chr3_3 | mRNA | 78458230 | 78460581 | 78458230 | ID=Msa0475330-mRNA-1;Parent=Msa0475330;Name=Msa0475330-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|1|0.66|1|1|1|3|327|325 |
| chr3_3 | exon | 78458230 | 78458658 | 78458230 | ID=Msa0475330-mRNA-1:exon:21157;Parent=Msa0475330-mRNA-1 |
| chr3_3 | exon | 78458788 | 78459204 | 78458788 | ID=Msa0475330-mRNA-1:exon:21156;Parent=Msa0475330-mRNA-1 |
| chr3_3 | exon | 78460123 | 78460581 | 78460123 | ID=Msa0475330-mRNA-1:exon:21155;Parent=Msa0475330-mRNA-1 |
| chr3_3 | CDS | 78460123 | 78460581 | 78460123 | ID=Msa0475330-mRNA-1:cds;Parent=Msa0475330-mRNA-1 |
| chr3_3 | CDS | 78458788 | 78459204 | 78458788 | ID=Msa0475330-mRNA-1:cds;Parent=Msa0475330-mRNA-1 |
| chr3_3 | CDS | 78458557 | 78458658 | 78458557 | ID=Msa0475330-mRNA-1:cds;Parent=Msa0475330-mRNA-1 |
| chr3_3 | three_prime_UTR | 78458230 | 78458556 | 78458230 | ID=Msa0475330-mRNA-1:three_prime_utr;Parent=Msa0475330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
