Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1002600 | XP_003611972.1 | 91.571 | 522 | 9 | 1 | 1 | 522 | 1 | 487 | 0.0 | 902 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1002600 | sp|O23215|PBRP1_ARATH | 79.032 | 372 | 36 | 4 | 1 | 369 | 1 | 333 | 0.0 | 568 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1002600 | G7KC98 | 91.571 | 522 | 9 | 1 | 1 | 522 | 1 | 487 | 0.0 | 902 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004060 | Msa1002600 | -0.803874 | 2.831006e-49 | -8.615850e-47 |
| Msa0006880 | Msa1002600 | -0.840340 | 9.226162e-58 | -8.615850e-47 |
| Msa0027580 | Msa1002600 | -0.802716 | 4.915999e-49 | -8.615850e-47 |
| Msa0029260 | Msa1002600 | -0.811012 | 8.660029e-51 | -8.615850e-47 |
| Msa0036370 | Msa1002600 | -0.815289 | 9.975925e-52 | -8.615850e-47 |
| Msa0049390 | Msa1002600 | -0.804119 | 2.517041e-49 | -8.615850e-47 |
| Msa0052350 | Msa1002600 | 0.826099 | 3.266270e-54 | -8.615850e-47 |
| Msa0055100 | Msa1002600 | -0.804387 | 2.213210e-49 | -8.615850e-47 |
| Msa0055150 | Msa1002600 | -0.809906 | 1.500697e-50 | -8.615850e-47 |
| Msa0072170 | Msa1002600 | -0.814532 | 1.468319e-51 | -8.615850e-47 |
| Msa0075340 | Msa1002600 | -0.803376 | 3.590465e-49 | -8.615850e-47 |
| Msa0090030 | Msa1002600 | -0.810683 | 1.020147e-50 | -8.615850e-47 |
| Msa0099510 | Msa1002600 | -0.815479 | 9.052334e-52 | -8.615850e-47 |
| Msa0101180 | Msa1002600 | -0.811144 | 8.106981e-51 | -8.615850e-47 |
| Msa0112300 | Msa1002600 | 0.830485 | 2.860568e-55 | -8.615850e-47 |
| Msa0120540 | Msa1002600 | -0.812783 | 3.563376e-51 | -8.615850e-47 |
| Msa0607510 | Msa1002600 | -0.819440 | 1.159889e-52 | -8.615850e-47 |
| Msa0609970 | Msa1002600 | -0.802997 | 4.301312e-49 | -8.615850e-47 |
| Msa0614990 | Msa1002600 | -0.835527 | 1.593403e-56 | -8.615850e-47 |
| Msa0618200 | Msa1002600 | 0.840790 | 7.034547e-58 | -8.615850e-47 |
| Msa0618930 | Msa1002600 | -0.808425 | 3.117084e-50 | -8.615850e-47 |
| Msa0619920 | Msa1002600 | -0.801066 | 1.072788e-48 | -8.615850e-47 |
| Msa0643320 | Msa1002600 | -0.805316 | 1.416057e-49 | -8.615850e-47 |
| Msa0648240 | Msa1002600 | 0.821442 | 4.029502e-53 | -8.615850e-47 |
| Msa0650620 | Msa1002600 | -0.803750 | 3.003136e-49 | -8.615850e-47 |
| Msa0657460 | Msa1002600 | 0.805362 | 1.384576e-49 | -8.615850e-47 |
| Msa0662630 | Msa1002600 | -0.802825 | 4.668169e-49 | -8.615850e-47 |
| Msa0664760 | Msa1002600 | -0.806284 | 8.865428e-50 | -8.615850e-47 |
| Msa0669720 | Msa1002600 | -0.824052 | 9.943972e-54 | -8.615850e-47 |
| Msa0669760 | Msa1002600 | -0.806902 | 6.563711e-50 | -8.615850e-47 |
| Msa0683140 | Msa1002600 | -0.803837 | 2.880901e-49 | -8.615850e-47 |
| Msa0683600 | Msa1002600 | -0.812099 | 5.026755e-51 | -8.615850e-47 |
| Msa0693790 | Msa1002600 | -0.808545 | 2.938550e-50 | -8.615850e-47 |
| Msa0695980 | Msa1002600 | -0.803293 | 3.736150e-49 | -8.615850e-47 |
| Msa0716420 | Msa1002600 | 0.964483 | 2.199616e-123 | -8.615850e-47 |
| Msa0735620 | Msa1002600 | 0.806283 | 8.868825e-50 | -8.615850e-47 |
| Msa0758230 | Msa1002600 | -0.825341 | 4.942875e-54 | -8.615850e-47 |
| Msa0790170 | Msa1002600 | 0.813755 | 2.179510e-51 | -8.615850e-47 |
| Msa0791820 | Msa1002600 | -0.821772 | 3.379320e-53 | -8.615850e-47 |
| Msa0792780 | Msa1002600 | -0.809914 | 1.495397e-50 | -8.615850e-47 |
| Msa0798810 | Msa1002600 | 0.850312 | 1.841745e-60 | -8.615850e-47 |
| Msa0799010 | Msa1002600 | 0.979855 | 6.810305e-149 | -8.615850e-47 |
| Msa0814630 | Msa1002600 | 0.843028 | 1.802750e-58 | -8.615850e-47 |
| Msa0826500 | Msa1002600 | -0.805121 | 1.555272e-49 | -8.615850e-47 |
| Msa0833190 | Msa1002600 | 0.807638 | 4.583718e-50 | -8.615850e-47 |
| Msa0837420 | Msa1002600 | 0.896325 | 4.110039e-76 | -8.615850e-47 |
| Msa0121820 | Msa1002600 | -0.808779 | 2.618696e-50 | -8.615850e-47 |
| Msa0131450 | Msa1002600 | -0.802685 | 4.990102e-49 | -8.615850e-47 |
| Msa0140400 | Msa1002600 | -0.829277 | 5.632388e-55 | -8.615850e-47 |
| Msa0140510 | Msa1002600 | 0.834536 | 2.831541e-56 | -8.615850e-47 |
| Msa0140520 | Msa1002600 | 0.829949 | 3.865064e-55 | -8.615850e-47 |
| Msa0148120 | Msa1002600 | -0.801741 | 7.803914e-49 | -8.615850e-47 |
| Msa0164370 | Msa1002600 | -0.806864 | 6.686466e-50 | -8.615850e-47 |
| Msa0166750 | Msa1002600 | -0.803835 | 2.884374e-49 | -8.615850e-47 |
| Msa0169300 | Msa1002600 | -0.806680 | 7.314498e-50 | -8.615850e-47 |
| Msa0175290 | Msa1002600 | 0.836711 | 7.971231e-57 | -8.615850e-47 |
| Msa0177270 | Msa1002600 | -0.800439 | 1.440499e-48 | -8.615850e-47 |
| Msa0182280 | Msa1002600 | -0.808789 | 2.606221e-50 | -8.615850e-47 |
| Msa0183460 | Msa1002600 | -0.816030 | 6.822893e-52 | -8.615850e-47 |
| Msa0190120 | Msa1002600 | -0.800871 | 1.175985e-48 | -8.615850e-47 |
| Msa0208810 | Msa1002600 | -0.803176 | 3.950141e-49 | -8.615850e-47 |
| Msa0212750 | Msa1002600 | 0.837684 | 4.495926e-57 | -8.615850e-47 |
| Msa0219100 | Msa1002600 | -0.800784 | 1.225023e-48 | -8.615850e-47 |
| Msa0219250 | Msa1002600 | 0.836944 | 6.951447e-57 | -8.615850e-47 |
| Msa0227310 | Msa1002600 | 0.821752 | 3.415442e-53 | -8.615850e-47 |
| Msa0365860 | Msa1002600 | -0.811466 | 6.904945e-51 | -8.615850e-47 |
| Msa0370160 | Msa1002600 | 0.827463 | 1.542811e-54 | -8.615850e-47 |
| Msa0387910 | Msa1002600 | -0.809971 | 1.453672e-50 | -8.615850e-47 |
| Msa0419520 | Msa1002600 | -0.801363 | 9.326003e-49 | -8.615850e-47 |
| Msa0419640 | Msa1002600 | 0.807816 | 4.202294e-50 | -8.615850e-47 |
| Msa0421330 | Msa1002600 | 0.815893 | 7.321644e-52 | -8.615850e-47 |
| Msa0427860 | Msa1002600 | 0.805254 | 1.458840e-49 | -8.615850e-47 |
| Msa0436190 | Msa1002600 | -0.824255 | 8.910387e-54 | -8.615850e-47 |
| Msa0436200 | Msa1002600 | -0.806670 | 7.350420e-50 | -8.615850e-47 |
| Msa0437690 | Msa1002600 | 0.816425 | 5.566206e-52 | -8.615850e-47 |
| Msa0465550 | Msa1002600 | -0.800197 | 1.613393e-48 | -8.615850e-47 |
| Msa0467260 | Msa1002600 | 0.806003 | 1.015606e-49 | -8.615850e-47 |
| Msa0993240 | Msa1002600 | -0.814820 | 1.267984e-51 | -8.615850e-47 |
| Msa1000930 | Msa1002600 | -0.800974 | 1.120141e-48 | -8.615850e-47 |
| Msa1002600 | Msa1023170 | 0.805794 | 1.123763e-49 | -8.615850e-47 |
| Msa1002600 | Msa1029080 | 0.829910 | 3.950686e-55 | -8.615850e-47 |
| Msa1002600 | Msa1069660 | 0.825661 | 4.150677e-54 | -8.615850e-47 |
| Msa1002600 | Msa1073400 | -0.803833 | 2.886112e-49 | -8.615850e-47 |
| Msa1002600 | Msa1080410 | 0.805356 | 1.388789e-49 | -8.615850e-47 |
| Msa1002600 | Msa1084500 | 0.821764 | 3.394212e-53 | -8.615850e-47 |
| Msa1002600 | Msa1087510 | 0.816317 | 5.885651e-52 | -8.615850e-47 |
| Msa1002600 | Msa1094430 | -0.812222 | 4.725485e-51 | -8.615850e-47 |
| Msa1002600 | Msa1098720 | 0.821196 | 4.591009e-53 | -8.615850e-47 |
| Msa1002600 | Msa1100530 | 0.801633 | 8.212162e-49 | -8.615850e-47 |
| Msa1002600 | Msa1103660 | 0.815681 | 8.161754e-52 | -8.615850e-47 |
| Msa1002600 | Msa1120810 | -0.802055 | 6.726911e-49 | -8.615850e-47 |
| Msa1002600 | Msa1125790 | 0.852904 | 3.398022e-61 | -8.615850e-47 |
| Msa1002600 | Msa1126120 | 0.837938 | 3.867870e-57 | -8.615850e-47 |
| Msa1002600 | Msa1130670 | 0.816337 | 5.824878e-52 | -8.615850e-47 |
| Msa1002600 | Msa1135800 | 0.826765 | 2.266201e-54 | -8.615850e-47 |
| Msa1002600 | Msa1135810 | 0.821520 | 3.865620e-53 | -8.615850e-47 |
| Msa1002600 | Msa1156170 | 0.824467 | 7.945859e-54 | -8.615850e-47 |
| Msa1002600 | Msa1172130 | 0.844811 | 5.999130e-59 | -8.615850e-47 |
| Msa1002600 | Msa1173900 | -0.835078 | 2.068685e-56 | -8.615850e-47 |
| Msa1002600 | Msa1178370 | -0.826010 | 3.430108e-54 | -8.615850e-47 |
| Msa1002600 | Msa1188600 | 0.829049 | 6.397658e-55 | -8.615850e-47 |
| Msa1002600 | Msa1190890 | 0.807522 | 4.850827e-50 | -8.615850e-47 |
| Msa1002600 | Msa1200320 | -0.810723 | 1.000507e-50 | -8.615850e-47 |
| Msa1002600 | Msa1210660 | 0.833601 | 4.857421e-56 | -8.615850e-47 |
| Msa1002600 | Msa1211050 | 0.827457 | 1.548186e-54 | -8.615850e-47 |
| Msa1002600 | Msa1211830 | -0.810332 | 1.214951e-50 | -8.615850e-47 |
| Msa1002600 | Msa1213770 | -0.807083 | 6.010100e-50 | -8.615850e-47 |
| Msa1002600 | Msa1223810 | 0.812852 | 3.441060e-51 | -8.615850e-47 |
| Msa1002600 | Msa1226610 | -0.817794 | 2.741518e-52 | -8.615850e-47 |
| Msa1002600 | Msa1253810 | -0.845871 | 3.098057e-59 | -8.615850e-47 |
| Msa1002600 | Msa1256270 | 0.825175 | 5.410151e-54 | -8.615850e-47 |
| Msa1002600 | Msa1258370 | -0.805324 | 1.410048e-49 | -8.615850e-47 |
| Msa1002600 | Msa1289300 | -0.801470 | 8.868367e-49 | -8.615850e-47 |
| Msa1002600 | Msa1293480 | 0.820803 | 5.654295e-53 | -8.615850e-47 |
| Msa1002600 | Msa1296460 | 0.828541 | 8.488243e-55 | -8.615850e-47 |
| Msa1002600 | Msa1298550 | 0.815954 | 7.093128e-52 | -8.615850e-47 |
| Msa1002600 | Msa1299700 | -0.803259 | 3.796713e-49 | -8.615850e-47 |
| Msa1002600 | Msa1303580 | -0.807391 | 5.171328e-50 | -8.615850e-47 |
| Msa1002600 | Msa1323800 | -0.813424 | 2.577202e-51 | -8.615850e-47 |
| Msa1002600 | Msa1330890 | 0.834391 | 3.078903e-56 | -8.615850e-47 |
| Msa1002600 | Msa1359270 | -0.801577 | 8.433857e-49 | -8.615850e-47 |
| Msa1002600 | Msa1363700 | -0.824328 | 8.564984e-54 | -8.615850e-47 |
| Msa1002600 | Msa1365860 | -0.804376 | 2.225279e-49 | -8.615850e-47 |
| Msa1002600 | Msa1371090 | -0.825700 | 4.063127e-54 | -8.615850e-47 |
| Msa1002600 | Msa1412930 | 0.811027 | 8.594983e-51 | -8.615850e-47 |
| Msa1002600 | Msa1417810 | 0.834703 | 2.571755e-56 | -8.615850e-47 |
| Msa1002600 | Msa1418960 | 0.834645 | 2.659495e-56 | -8.615850e-47 |
| Msa1002600 | Msa1445400 | 0.836718 | 7.941816e-57 | -8.615850e-47 |
| Msa1002600 | Msa1449350 | 0.829666 | 4.530733e-55 | -8.615850e-47 |
| Msa1002600 | Msa1454950 | -0.822923 | 1.827035e-53 | -8.615850e-47 |
| Msa1002600 | Msa1459760 | 0.802421 | 5.654362e-49 | -8.615850e-47 |
| Msa0258880 | Msa1002600 | 0.836894 | 7.160399e-57 | -8.615850e-47 |
| Msa0271890 | Msa1002600 | -0.812838 | 3.465187e-51 | -8.615850e-47 |
| Msa0279210 | Msa1002600 | 0.803324 | 3.679991e-49 | -8.615850e-47 |
| Msa0295000 | Msa1002600 | 0.854846 | 9.374539e-62 | -8.615850e-47 |
| Msa0296980 | Msa1002600 | 0.844120 | 9.205925e-59 | -8.615850e-47 |
| Msa0304660 | Msa1002600 | -0.801874 | 7.329669e-49 | -8.615850e-47 |
| Msa0310860 | Msa1002600 | -0.807482 | 4.947294e-50 | -8.615850e-47 |
| Msa0335320 | Msa1002600 | 0.804505 | 2.092219e-49 | -8.615850e-47 |
| Msa0509950 | Msa1002600 | 0.814115 | 1.815287e-51 | -8.615850e-47 |
| Msa0511770 | Msa1002600 | -0.804727 | 1.879942e-49 | -8.615850e-47 |
| Msa0520140 | Msa1002600 | -0.802508 | 5.425932e-49 | -8.615850e-47 |
| Msa0524590 | Msa1002600 | -0.809429 | 1.900553e-50 | -8.615850e-47 |
| Msa0524600 | Msa1002600 | -0.825079 | 5.699381e-54 | -8.615850e-47 |
| Msa0554180 | Msa1002600 | 0.807330 | 5.329498e-50 | -8.615850e-47 |
| Msa0554380 | Msa1002600 | 0.809702 | 1.660269e-50 | -8.615850e-47 |
| Msa0565620 | Msa1002600 | 0.807898 | 4.037190e-50 | -8.615850e-47 |
| Msa0578090 | Msa1002600 | -0.800292 | 1.543614e-48 | -8.615850e-47 |
| Msa0579370 | Msa1002600 | -0.809253 | 2.073259e-50 | -8.615850e-47 |
| Msa0586520 | Msa1002600 | 0.831341 | 1.763481e-55 | -8.615850e-47 |
| Msa0586850 | Msa1002600 | -0.814546 | 1.458060e-51 | -8.615850e-47 |
| Msa0602370 | Msa1002600 | -0.806204 | 9.216779e-50 | -8.615850e-47 |
| Msa0855160 | Msa1002600 | 0.824064 | 9.882259e-54 | -8.615850e-47 |
| Msa0860900 | Msa1002600 | 0.821466 | 3.978564e-53 | -8.615850e-47 |
| Msa0879860 | Msa1002600 | -0.826624 | 2.448873e-54 | -8.615850e-47 |
| Msa0895310 | Msa1002600 | -0.813303 | 2.740303e-51 | -8.615850e-47 |
| Msa0898890 | Msa1002600 | -0.806258 | 8.977856e-50 | -8.615850e-47 |
| Msa0921870 | Msa1002600 | -0.802079 | 6.649274e-49 | -8.615850e-47 |
| Msa0924150 | Msa1002600 | 0.828726 | 7.657249e-55 | -8.615850e-47 |
| Msa0940830 | Msa1002600 | -0.800820 | 1.204319e-48 | -8.615850e-47 |
| Msa0943270 | Msa1002600 | -0.822291 | 2.562499e-53 | -8.615850e-47 |
| Msa0947530 | Msa1002600 | 0.810788 | 9.683975e-51 | -8.615850e-47 |
| Msa0960150 | Msa1002600 | 0.802977 | 4.342765e-49 | -8.615850e-47 |
| Msa0963090 | Msa1002600 | 0.810403 | 1.173108e-50 | -8.615850e-47 |
| Msa0966720 | Msa1002600 | 0.802114 | 6.540986e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1002600 | MtrunA17_Chr5g0403861 | 91.571 | 522 | 9 | 1 | 1 | 522 | 1 | 487 | 0.0 | 902 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1002600 | AT4G36650.1 | 79.032 | 372 | 36 | 4 | 1 | 369 | 1 | 333 | 0.0 | 568 |
| Msa1002600 | AT4G36650.2 | 67.317 | 410 | 79 | 7 | 1 | 398 | 1 | 367 | 8.14e-177 | 502 |
Find 150 sgRNAs with CRISPR-Local
Find 293 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGAATTCATTTCAGTATTC+TGG | 0.159062 | 6_4:-88313828 | None:intergenic |
| TGTCATTTGGCTTGTTTCTT+AGG | 0.206105 | 6_4:+88313927 | Msa1002600:three_prime_UTR |
| GATTGCAAGTGTCGAATATT+TGG | 0.233569 | 6_4:-88313783 | None:intergenic |
| CTCAGCTGCCGCCATATATT+TGG | 0.241130 | 6_4:+88313191 | Msa1002600:CDS |
| CCCACAACCTTAATTGCTTC+TGG | 0.251621 | 6_4:+88313375 | Msa1002600:CDS |
| ACCAGTTACTTTGCAAATTT+CGG | 0.256850 | 6_4:-88313247 | None:intergenic |
| AATATAACCTGAAGGGTTCT+AGG | 0.270602 | 6_4:-88310876 | None:intergenic |
| TATAGAGGTTACTTCTTCTT+TGG | 0.274158 | 6_4:+88313425 | Msa1002600:CDS |
| GATATAGAATTGCTGTTAAT+AGG | 0.275872 | 6_4:-88312623 | None:intergenic |
| GTCTTCTTCTTCGTTGGTTT+CGG | 0.282449 | 6_4:-88310511 | None:intergenic |
| TGCTACTGCTGCTCTTGTTC+AGG | 0.283370 | 6_4:+88310833 | Msa1002600:CDS |
| CCTTGCGCCGCTGAACAGTA+TGG | 0.285793 | 6_4:-88310315 | None:intergenic |
| GTAATTCTTTATACACTTTA+CGG | 0.287548 | 6_4:-88313287 | None:intergenic |
| GTGTTGTTGTTGATAATCTT+AGG | 0.297419 | 6_4:+88310682 | Msa1002600:CDS |
| AGAACGTCCAGAAGCAATTA+AGG | 0.300940 | 6_4:-88313382 | None:intergenic |
| CGGGAAATACATCAAGATAC+TGG | 0.318001 | 6_4:+88312577 | Msa1002600:CDS |
| CTCTGTACTTGTGTTCTCAA+TGG | 0.320183 | 6_4:-88310267 | None:intergenic |
| GCGGCAGCTGAGATGCTAAT+TGG | 0.320894 | 6_4:-88313180 | None:intergenic |
| CTGCTACTTGTTTGAGAAAT+CGG | 0.322311 | 6_4:+88310796 | Msa1002600:CDS |
| CTCTGTTATGAGGTCGCTTT+CGG | 0.324574 | 6_4:+88313740 | Msa1002600:CDS |
| ATAAAGAATTACTGGAGAAT+TGG | 0.329959 | 6_4:+88313298 | Msa1002600:CDS |
| GTGACCTCTACCATGGGTTC+AGG | 0.330609 | 6_4:-88313648 | None:intergenic |
| GTAAAGCGGGCTGGGCTCTA+AGG | 0.334203 | 6_4:-88310577 | None:intergenic |
| TAAAGTGTATAAAGAATTAC+TGG | 0.348175 | 6_4:+88313290 | Msa1002600:CDS |
| TGAAATCAGTAGGTTTCTTA+AGG | 0.353249 | 6_4:+88313879 | Msa1002600:three_prime_UTR |
| GGTTTGTTTGGTTTAAATTC+CGG | 0.356896 | 6_4:-88313462 | None:intergenic |
| CTATTCAGCAGTCAACGTTT+TGG | 0.357039 | 6_4:+88313532 | Msa1002600:CDS |
| TTGGTTTGGTTGAGAGTGGG+GGG | 0.359289 | 6_4:-88310486 | None:intergenic |
| CTACCATGGGTTCAGGTTGT+TGG | 0.366695 | 6_4:-88313641 | None:intergenic |
| TTCTTCGTTGGTTTCGGTGT+TGG | 0.368521 | 6_4:-88310505 | None:intergenic |
| GCCCGCTCCGGAGGAACAGC+TGG | 0.371273 | 6_4:-88313348 | None:intergenic |
| TAAAGAATTACTGGAGAATT+GGG | 0.376158 | 6_4:+88313299 | Msa1002600:CDS |
| TCGGCCTCATTAGGTTTGTT+TGG | 0.386243 | 6_4:-88313474 | None:intergenic |
| TCCATTGAATCTAAAACATT+CGG | 0.388238 | 6_4:-88313594 | None:intergenic |
| TTTGGATTCAGAAAATTTGC+CGG | 0.392454 | 6_4:+88313443 | Msa1002600:CDS |
| TATATATGTATTGTGTCATT+TGG | 0.397456 | 6_4:+88313914 | Msa1002600:three_prime_UTR |
| CGTTGGTTTCGGTGTTGGTT+TGG | 0.400396 | 6_4:-88310500 | None:intergenic |
| GTGTTGGTTTGGTTGAGAGT+GGG | 0.400909 | 6_4:-88310489 | None:intergenic |
| GCCGAAATTTGCAAAGTAAC+TGG | 0.401723 | 6_4:+88313246 | Msa1002600:CDS |
| TTTGGGTCGCACTGGGAAGT+TGG | 0.408622 | 6_4:-88313560 | None:intergenic |
| TCAAGAACCTAGAACCCTTC+AGG | 0.414329 | 6_4:+88310869 | Msa1002600:CDS |
| AATGTGGCACAAAAGGAAAT+CGG | 0.414393 | 6_4:+88312557 | Msa1002600:CDS |
| TGCCGCCAATGTGGCACAAA+AGG | 0.415436 | 6_4:+88312550 | Msa1002600:CDS |
| TTGGGTCGCACTGGGAAGTT+GGG | 0.415514 | 6_4:-88313559 | None:intergenic |
| TTAGATTCAATGGATATTGA+TGG | 0.416703 | 6_4:+88313603 | Msa1002600:CDS |
| GAATGGGTCTTCTTCTTCGT+TGG | 0.417262 | 6_4:-88310517 | None:intergenic |
| AACAGCTGGGGTGTAATTAG+AGG | 0.420498 | 6_4:-88313334 | None:intergenic |
| ATAGATGTTTCGTCGATACT+TGG | 0.424209 | 6_4:+88310720 | Msa1002600:CDS |
| ATGAAGCCCGTGGGCTCGAA+TGG | 0.428456 | 6_4:-88310534 | None:intergenic |
| TACTTTGCAAATTTCGGCCT+GGG | 0.429283 | 6_4:-88313241 | None:intergenic |
| TGGACGTTCTTCAACAACTA+AGG | 0.433325 | 6_4:+88313395 | Msa1002600:CDS |
| TGAAGAAGGGTGCAAAATCT+TGG | 0.434378 | 6_4:-88312656 | None:intergenic |
| TGTTGTTGTTGATAATCTTA+GGG | 0.437061 | 6_4:+88310683 | Msa1002600:CDS |
| TCAACCAAAGGGTTGTGTAA+TGG | 0.437946 | 6_4:+88312932 | Msa1002600:CDS |
| CAGATTTATTGAGCTGAAGA+AGG | 0.440283 | 6_4:-88312670 | None:intergenic |
| ATCAGTTAGACCTGGCTGGC+TGG | 0.441531 | 6_4:+88312958 | Msa1002600:CDS |
| TAGTTGGCAAGCCAAATATA+TGG | 0.445296 | 6_4:-88313202 | None:intergenic |
| GGTGTTGGTTTGGTTGAGAG+TGG | 0.447403 | 6_4:-88310490 | None:intergenic |
| ACTGCTGAATAGCCGATGAT+TGG | 0.448535 | 6_4:-88313521 | None:intergenic |
| CGAGACATAGGGGATTATCT+TGG | 0.451200 | 6_4:-88310446 | None:intergenic |
| TGTTGGTTTGGTTGAGAGTG+GGG | 0.456506 | 6_4:-88310488 | None:intergenic |
| TGTTTCGTCGATACTTGGAT+TGG | 0.463509 | 6_4:+88310725 | Msa1002600:CDS |
| CCCAGCTGTTCCTCCGGAGC+GGG | 0.465744 | 6_4:+88313347 | Msa1002600:CDS |
| GTTGGTTTGGTTGAGAGTGG+GGG | 0.466278 | 6_4:-88310487 | None:intergenic |
| CACTACCACAAAGTGATCAT+TGG | 0.466967 | 6_4:-88312985 | None:intergenic |
| AGATTGAAGGTAAAGCGGGC+TGG | 0.467976 | 6_4:-88310586 | None:intergenic |
| TCCAGAAGCAATTAAGGTTG+TGG | 0.468811 | 6_4:-88313376 | None:intergenic |
| TAACTTGTTTCATATTGCAT+TGG | 0.471151 | 6_4:+88313988 | Msa1002600:three_prime_UTR |
| GATTGAAGGTAAAGCGGGCT+GGG | 0.472239 | 6_4:-88310585 | None:intergenic |
| CCAGAAGCAATTAAGGTTGT+GGG | 0.478234 | 6_4:-88313375 | None:intergenic |
| CGGTGGTTGTTGTTGTGCAA+CGG | 0.480438 | 6_4:-88310338 | None:intergenic |
| TTGTCCATTACACAACCCTT+TGG | 0.482073 | 6_4:-88312936 | None:intergenic |
| GAGACATAGGGGATTATCTT+GGG | 0.484053 | 6_4:-88310445 | None:intergenic |
| CATTGGACATCCAGCCAGCC+AGG | 0.484576 | 6_4:-88312968 | None:intergenic |
| TTACTTTGCAAATTTCGGCC+TGG | 0.486938 | 6_4:-88313242 | None:intergenic |
| AAGCAGGAGGACTGTAAAGT+TGG | 0.489113 | 6_4:-88313707 | None:intergenic |
| AACTAAGGTTGATGCTATAG+AGG | 0.490167 | 6_4:+88313410 | Msa1002600:CDS |
| CCATGGGTTCAGGTTGTTGG+TGG | 0.491351 | 6_4:-88313638 | None:intergenic |
| TAGATTCAATGGATATTGAT+GGG | 0.494603 | 6_4:+88313604 | Msa1002600:CDS |
| TTACACCCCAGCTGTTCCTC+CGG | 0.495785 | 6_4:+88313341 | Msa1002600:CDS |
| CAATCGTCTAAGACAATGCC+TGG | 0.497496 | 6_4:+88313801 | Msa1002600:CDS |
| GTCACAAATGGTGCTGGTAT+CGG | 0.500308 | 6_4:+88313666 | Msa1002600:CDS |
| ATGTGGCACAAAAGGAAATC+GGG | 0.502560 | 6_4:+88312558 | Msa1002600:CDS |
| CTTGCGCCGCTGAACAGTAT+GGG | 0.505019 | 6_4:-88310314 | None:intergenic |
| TGAAGCCCGTGGGCTCGAAT+GGG | 0.505489 | 6_4:-88310533 | None:intergenic |
| TTCCGCAAGGTATCCCGAAA+AGG | 0.505591 | 6_4:-88310616 | None:intergenic |
| CAAGTTCAAGCTCTGTTATG+AGG | 0.516513 | 6_4:+88313730 | Msa1002600:CDS |
| TCAGCTCAATAAATCTGCTC+AGG | 0.517419 | 6_4:+88312676 | Msa1002600:CDS |
| GATTATCTTGGGCGCGCAGG+TGG | 0.519878 | 6_4:-88310434 | None:intergenic |
| GGTGGAAGATGTGGTGAGGA+TGG | 0.522042 | 6_4:-88310416 | None:intergenic |
| GGGGATTATCTTGGGCGCGC+AGG | 0.527359 | 6_4:-88310437 | None:intergenic |
| GATCTGGTGTGACGAGACAT+AGG | 0.527875 | 6_4:-88310458 | None:intergenic |
| GTGGAAGATGTGGTGAGGAT+GGG | 0.528792 | 6_4:-88310415 | None:intergenic |
| CCCGCTCCGGAGGAACAGCT+GGG | 0.534028 | 6_4:-88313347 | None:intergenic |
| AAAAGGAGAGGGAAGATTGA+AGG | 0.535379 | 6_4:-88310599 | None:intergenic |
| TCATAACCGCTTTCTCAACA+TGG | 0.537661 | 6_4:+88310553 | Msa1002600:CDS |
| ACAAATGCTTCTGCACTCGC+AGG | 0.542085 | 6_4:+88313154 | Msa1002600:CDS |
| TAAACCAAACAAACCTAATG+AGG | 0.542847 | 6_4:+88313470 | Msa1002600:CDS |
| CCATACTGTTCAGCGGCGCA+AGG | 0.542989 | 6_4:+88310315 | Msa1002600:CDS |
| GACAATCAGTTAGACCTGGC+TGG | 0.544709 | 6_4:+88312954 | Msa1002600:CDS |
| GTGGGAAATGCCCGCTCCGG+AGG | 0.547290 | 6_4:-88313357 | None:intergenic |
| TTTCAGTATTCTGGAAAACC+AGG | 0.547759 | 6_4:-88313819 | None:intergenic |
| GTTGTGGGAAATGCCCGCTC+CGG | 0.551336 | 6_4:-88313360 | None:intergenic |
| TGCTCGTGCAAGCCAATCAT+CGG | 0.551744 | 6_4:+88313509 | Msa1002600:CDS |
| GGATTTCATTATTCAACTCA+AGG | 0.554136 | 6_4:+88314009 | Msa1002600:three_prime_UTR |
| CCCATGGTAGAGGTCACAAA+TGG | 0.556010 | 6_4:+88313654 | Msa1002600:CDS |
| ATCTGGTGTGACGAGACATA+GGG | 0.559207 | 6_4:-88310457 | None:intergenic |
| AGAAGACCCATTCGAGCCCA+CGG | 0.559374 | 6_4:+88310527 | Msa1002600:CDS |
| TGCAAGTGTCGAATATTTGG+AGG | 0.560033 | 6_4:-88313780 | None:intergenic |
| ACCATTTGTGACCTCTACCA+TGG | 0.561783 | 6_4:-88313655 | None:intergenic |
| GTAGAGGTCACAAATGGTGC+TGG | 0.562911 | 6_4:+88313660 | Msa1002600:CDS |
| ACAGAGCTTGAACTTGAAGC+AGG | 0.565561 | 6_4:-88313723 | None:intergenic |
| GGGAAGATTGAAGGTAAAGC+GGG | 0.566199 | 6_4:-88310590 | None:intergenic |
| CCCCAGCTGTTCCTCCGGAG+CGG | 0.571837 | 6_4:+88313346 | Msa1002600:CDS |
| ATATTTGGAGGAGCAGATGA+AGG | 0.572074 | 6_4:-88313768 | None:intergenic |
| AGATTTATTGAGCTGAAGAA+GGG | 0.572226 | 6_4:-88312669 | None:intergenic |
| CAGGAACTGGCTACTCACAT+AGG | 0.573292 | 6_4:+88313117 | Msa1002600:intron |
| AGGAGGACTGTAAAGTTGGT+TGG | 0.579622 | 6_4:-88313703 | None:intergenic |
| ACAACCTGAACCCATGGTAG+AGG | 0.579624 | 6_4:+88313644 | Msa1002600:CDS |
| GGGAAATACATCAAGATACT+GGG | 0.584566 | 6_4:+88312578 | Msa1002600:CDS |
| CGTTGCACAACAACAACCAC+CGG | 0.589945 | 6_4:+88310339 | Msa1002600:CDS |
| CCACCAACAACCTGAACCCA+TGG | 0.593498 | 6_4:+88313638 | Msa1002600:CDS |
| GATGTCCAATGATCACTTTG+TGG | 0.593682 | 6_4:+88312980 | Msa1002600:CDS |
| CCATTTGTGACCTCTACCAT+GGG | 0.594086 | 6_4:-88313654 | None:intergenic |
| GGGCGCGCAGGTGGAAGATG+TGG | 0.601302 | 6_4:-88310425 | None:intergenic |
| GAAGACCCATTCGAGCCCAC+GGG | 0.610171 | 6_4:+88310528 | Msa1002600:CDS |
| ACAGCTGGGGTGTAATTAGA+GGG | 0.610212 | 6_4:-88313333 | None:intergenic |
| CAAGGTATCCCGAAAAGGAG+AGG | 0.615007 | 6_4:-88310611 | None:intergenic |
| CTCAGATAAATGAAATCAGT+AGG | 0.617919 | 6_4:+88313869 | Msa1002600:three_prime_UTR |
| AAGGTATCCCGAAAAGGAGA+GGG | 0.619065 | 6_4:-88310610 | None:intergenic |
| ATCACAGAATGCACATCATG+CGG | 0.620104 | 6_4:+88310369 | Msa1002600:CDS |
| AGGTTAGAATATAACCTGAA+GGG | 0.624033 | 6_4:-88310883 | None:intergenic |
| AGAAGACAAACGCAAAACCC+AGG | 0.626006 | 6_4:+88313224 | Msa1002600:CDS |
| TAAGGACCATGTTGAGAAAG+CGG | 0.635021 | 6_4:-88310559 | None:intergenic |
| AGGGAAGATTGAAGGTAAAG+CGG | 0.636882 | 6_4:-88310591 | None:intergenic |
| GAGCTTGAACTTGAAGCAGG+AGG | 0.641001 | 6_4:-88313720 | None:intergenic |
| CGCAGGTGGAAGATGTGGTG+AGG | 0.641116 | 6_4:-88310420 | None:intergenic |
| AATTTCAATTGCCGCCAATG+TGG | 0.648364 | 6_4:+88312541 | Msa1002600:CDS |
| AGTGATGTTAGTAACATACA+AGG | 0.652580 | 6_4:-88313848 | None:intergenic |
| TTTGGAGGAGCAGATGAAGG+AGG | 0.658376 | 6_4:-88313765 | None:intergenic |
| CCGCTCCGGAGGAACAGCTG+GGG | 0.661546 | 6_4:-88313346 | None:intergenic |
| AAAGCGGTTATGAAGCCCGT+GGG | 0.662090 | 6_4:-88310543 | None:intergenic |
| AACAAACCTAATGAGGCCGA+AGG | 0.665876 | 6_4:+88313477 | Msa1002600:CDS |
| GAGTACGTTCAAGTTCCGCA+AGG | 0.674170 | 6_4:-88310629 | None:intergenic |
| TCTGGTGTGACGAGACATAG+GGG | 0.679597 | 6_4:-88310456 | None:intergenic |
| GAAAGCGGTTATGAAGCCCG+TGG | 0.684756 | 6_4:-88310544 | None:intergenic |
| AATGGACAATCAGTTAGACC+TGG | 0.692074 | 6_4:+88312950 | Msa1002600:CDS |
| GAAGTGCCCATACTGTTCAG+CGG | 0.702862 | 6_4:+88310308 | Msa1002600:CDS |
| TTGGCAAGCCAAATATATGG+CGG | 0.712362 | 6_4:-88313199 | None:intergenic |
| ATTGTCTTTCTTCTACGACG+CGG | 0.797371 | 6_4:-88310392 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTTTTTTTTGACAAAG+AGG | + | chr6_4:88311383-88311402 | Msa1002600:intron | 15.0% |
| !!! | CTTTTGTATTTGTAATATAA+AGG | - | chr6_4:88313070-88313089 | None:intergenic | 15.0% |
| !!! | GAATGTACTTTTTTTTTTTA+AGG | + | chr6_4:88314048-88314067 | Msa1002600:three_prime_UTR | 15.0% |
| !!! | TTTTTTGTTAAAAGCTGAAT+TGG | + | chr6_4:88311299-88311318 | Msa1002600:intron | 20.0% |
| !! | TAATAGTCTAATATTGCAAA+TGG | + | chr6_4:88311595-88311614 | Msa1002600:intron | 20.0% |
| !!! | GTTAATATTGGACAATTTTT+CGG | + | chr6_4:88311743-88311762 | Msa1002600:intron | 20.0% |
| !!! | AAATAAGCTTTTTAGTAACT+GGG | - | chr6_4:88311818-88311837 | None:intergenic | 20.0% |
| !!! | AAAATAAGCTTTTTAGTAAC+TGG | - | chr6_4:88311819-88311838 | None:intergenic | 20.0% |
| !!! | CTTATTTTTGTCTATGAAAA+TGG | + | chr6_4:88311831-88311850 | Msa1002600:intron | 20.0% |
| !! | ATAAATAATAGAGGAAATGA+AGG | - | chr6_4:88312262-88312281 | None:intergenic | 20.0% |
| !! | ATGCTGAATATAAATAATAG+AGG | - | chr6_4:88312271-88312290 | None:intergenic | 20.0% |
| !!! | TATTTCATATAGCAGATTTT+TGG | + | chr6_4:88312363-88312382 | Msa1002600:intron | 20.0% |
| !!! | ATTTGCTATTGATAATACTT+TGG | + | chr6_4:88312405-88312424 | Msa1002600:intron | 20.0% |
| !! | ATCTATTACTAATTGTATCA+TGG | - | chr6_4:88312812-88312831 | None:intergenic | 20.0% |
| !!! | TTCTCTATGATTTTTCTATT+GGG | + | chr6_4:88312845-88312864 | Msa1002600:intron | 20.0% |
| !! | GTAATTCTTTATACACTTTA+CGG | - | chr6_4:88313290-88313309 | None:intergenic | 20.0% |
| !! | TAAAGTGTATAAAGAATTAC+TGG | + | chr6_4:88313290-88313309 | Msa1002600:CDS | 20.0% |
| !!! | TATATATGTATTGTGTCATT+TGG | + | chr6_4:88313914-88313933 | Msa1002600:three_prime_UTR | 20.0% |
| !!! | TGTTGTTGTTGATAATCTTA+GGG | + | chr6_4:88310683-88310702 | Msa1002600:CDS | 25.0% |
| ! | AATTGAAAGGAGGAAAAAAA+AGG | - | chr6_4:88310906-88310925 | None:intergenic | 25.0% |
| !!! | TTTTTTTTCCTCCTTTCAAT+TGG | + | chr6_4:88310905-88310924 | Msa1002600:intron | 25.0% |
| ! | CAATCACATTTATCATCTTT+AGG | - | chr6_4:88311111-88311130 | None:intergenic | 25.0% |
| ! | GTTTAAAGATAAGTTCAATG+TGG | - | chr6_4:88311261-88311280 | None:intergenic | 25.0% |
| ! | TGAACTTATCTTTAAACATC+AGG | + | chr6_4:88311264-88311283 | Msa1002600:intron | 25.0% |
| ! | GATACCTATAATAAGTATCA+GGG | + | chr6_4:88311321-88311340 | Msa1002600:intron | 25.0% |
| ! | ATTTGATATGATGTAAGCAT+TGG | + | chr6_4:88311411-88311430 | Msa1002600:intron | 25.0% |
| ! | AAAATACCATTACCATATCA+TGG | + | chr6_4:88311564-88311583 | Msa1002600:intron | 25.0% |
| ! | TTGAATGAATGCTCATAATT+CGG | - | chr6_4:88311866-88311885 | None:intergenic | 25.0% |
| ! | CGATAAATAGGTAAATAGAA+AGG | - | chr6_4:88312033-88312052 | None:intergenic | 25.0% |
| ! | ACTGAAATTCAAAATCCTTA+AGG | - | chr6_4:88312130-88312149 | None:intergenic | 25.0% |
| !!! | TTCTTTTTTATGCACATGTA+TGG | + | chr6_4:88312185-88312204 | Msa1002600:intron | 25.0% |
| ! | GCATAGGTTATATAAATCAT+TGG | - | chr6_4:88312235-88312254 | None:intergenic | 25.0% |
| ! | GTATTATCAATAGCAAATTG+TGG | - | chr6_4:88312403-88312422 | None:intergenic | 25.0% |
| !! | TCAATATCGAGATTTTACTT+GGG | - | chr6_4:88312487-88312506 | None:intergenic | 25.0% |
| ! | TTTCACAAGAGTTACAAATA+CGG | - | chr6_4:88312513-88312532 | None:intergenic | 25.0% |
| !! | GATATAGAATTGCTGTTAAT+AGG | - | chr6_4:88312626-88312645 | None:intergenic | 25.0% |
| !! | CAAGATTTTCAAACGAAATA+AGG | - | chr6_4:88312740-88312759 | None:intergenic | 25.0% |
| ! | TTCGTTTGAAAATCTTGAAA+CGG | + | chr6_4:88312743-88312762 | Msa1002600:intron | 25.0% |
| !!! | CAGATTCTGTTTTTACTTTA+TGG | - | chr6_4:88312780-88312799 | None:intergenic | 25.0% |
| !! | CTTCTCTATGATTTTTCTAT+TGG | + | chr6_4:88312844-88312863 | Msa1002600:intron | 25.0% |
| !! | TCTCTATGATTTTTCTATTG+GGG | + | chr6_4:88312846-88312865 | Msa1002600:intron | 25.0% |
| !! | TCCCTAAAATAACTTTTCTT+AGG | + | chr6_4:88313024-88313043 | Msa1002600:intron | 25.0% |
| !!! | CCCTAAGAAAAGTTATTTTA+GGG | - | chr6_4:88313028-88313047 | None:intergenic | 25.0% |
| !! | CCCTAAAATAACTTTTCTTA+GGG | + | chr6_4:88313025-88313044 | Msa1002600:intron | 25.0% |
| !!! | ACCCTAAGAAAAGTTATTTT+AGG | - | chr6_4:88313029-88313048 | None:intergenic | 25.0% |
| ! | ATAAAGAATTACTGGAGAAT+TGG | + | chr6_4:88313298-88313317 | Msa1002600:CDS | 25.0% |
| ! | TAAAGAATTACTGGAGAATT+GGG | + | chr6_4:88313299-88313318 | Msa1002600:CDS | 25.0% |
| !!! | ATTCGGATTTTGATGATTTT+GGG | - | chr6_4:88313580-88313599 | None:intergenic | 25.0% |
| !! | TCCATTGAATCTAAAACATT+CGG | - | chr6_4:88313597-88313616 | None:intergenic | 25.0% |
| ! | TTAGATTCAATGGATATTGA+TGG | + | chr6_4:88313603-88313622 | Msa1002600:CDS | 25.0% |
| ! | TAGATTCAATGGATATTGAT+GGG | + | chr6_4:88313604-88313623 | Msa1002600:CDS | 25.0% |
| !!! | TAACTTGTTTCATATTGCAT+TGG | + | chr6_4:88313988-88314007 | Msa1002600:three_prime_UTR | 25.0% |
| !! | GTGTTGTTGTTGATAATCTT+AGG | + | chr6_4:88310682-88310701 | Msa1002600:CDS | 30.0% |
| ! | ATCATGCTTTTCAGTTGTTT+AGG | + | chr6_4:88310763-88310782 | Msa1002600:CDS | 30.0% |
| ! | TCATGCTTTTCAGTTGTTTA+GGG | + | chr6_4:88310764-88310783 | Msa1002600:CDS | 30.0% |
| AGGTTAGAATATAACCTGAA+GGG | - | chr6_4:88310886-88310905 | None:intergenic | 30.0% | |
| AAGGTTAGAATATAACCTGA+AGG | - | chr6_4:88310887-88310906 | None:intergenic | 30.0% | |
| AAGTTTAACCAATTGAAAGG+AGG | - | chr6_4:88310916-88310935 | None:intergenic | 30.0% | |
| CCTAAGTTTAACCAATTGAA+AGG | - | chr6_4:88310919-88310938 | None:intergenic | 30.0% | |
| CCTTTCAATTGGTTAAACTT+AGG | + | chr6_4:88310916-88310935 | Msa1002600:intron | 30.0% | |
| CACATACTAGCTAATATGTT+CGG | - | chr6_4:88311035-88311054 | None:intergenic | 30.0% | |
| TTATCTTTAAACATCAGGAC+TGG | + | chr6_4:88311269-88311288 | Msa1002600:intron | 30.0% | |
| TATCTTTAAACATCAGGACT+GGG | + | chr6_4:88311270-88311289 | Msa1002600:intron | 30.0% | |
| GGATACCTATAATAAGTATC+AGG | + | chr6_4:88311320-88311339 | Msa1002600:intron | 30.0% | |
| ATTAGAAACGATCCATGATA+TGG | - | chr6_4:88311579-88311598 | None:intergenic | 30.0% | |
| ! | AGTCTTGTAAGTGATTTAGT+TGG | + | chr6_4:88311696-88311715 | Msa1002600:intron | 30.0% |
| AAAACTAAGCAGCGATAAAT+AGG | - | chr6_4:88312045-88312064 | None:intergenic | 30.0% | |
| !! | GTCTTATTTCAATTGCTATG+CGG | + | chr6_4:88312310-88312329 | Msa1002600:intron | 30.0% |
| CTATATGAAATAGCAGATAG+TGG | - | chr6_4:88312355-88312374 | None:intergenic | 30.0% | |
| TGGATCTTACAATTCATGTT+AGG | + | chr6_4:88312425-88312444 | Msa1002600:intron | 30.0% | |
| ! | GAGAAAAGCCTGTAAATTTT+GGG | - | chr6_4:88312453-88312472 | None:intergenic | 30.0% |
| ! | ATTTTACTTGGGATCACAAA+GGG | - | chr6_4:88312476-88312495 | None:intergenic | 30.0% |
| ! | GTCAATATCGAGATTTTACT+TGG | - | chr6_4:88312488-88312507 | None:intergenic | 30.0% |
| AGATTTATTGAGCTGAAGAA+GGG | - | chr6_4:88312672-88312691 | None:intergenic | 30.0% | |
| !! | TAACTCTAGAAGTCACATTT+TGG | - | chr6_4:88312716-88312735 | None:intergenic | 30.0% |
| ! | TTTGTTCTTTTCTCAACCAA+AGG | + | chr6_4:88312920-88312939 | Msa1002600:CDS | 30.0% |
| ! | TTGTTCTTTTCTCAACCAAA+GGG | + | chr6_4:88312921-88312940 | Msa1002600:CDS | 30.0% |
| CAAATACAAAAGTCTGAGAA+TGG | + | chr6_4:88313078-88313097 | Msa1002600:intron | 30.0% | |
| ! | ACCAGTTACTTTGCAAATTT+CGG | - | chr6_4:88313250-88313269 | None:intergenic | 30.0% |
| TATAGAGGTTACTTCTTCTT+TGG | + | chr6_4:88313425-88313444 | Msa1002600:CDS | 30.0% | |
| TTTGGATTCAGAAAATTTGC+CGG | + | chr6_4:88313443-88313462 | Msa1002600:CDS | 30.0% | |
| ! | GGTTTGTTTGGTTTAAATTC+CGG | - | chr6_4:88313465-88313484 | None:intergenic | 30.0% |
| TAAACCAAACAAACCTAATG+AGG | + | chr6_4:88313470-88313489 | Msa1002600:CDS | 30.0% | |
| !! | CATTCGGATTTTGATGATTT+TGG | - | chr6_4:88313581-88313600 | None:intergenic | 30.0% |
| !! | TCCGAATGTTTTAGATTCAA+TGG | + | chr6_4:88313593-88313612 | Msa1002600:CDS | 30.0% |
| AGGAATTCATTTCAGTATTC+TGG | - | chr6_4:88313831-88313850 | None:intergenic | 30.0% | |
| AGTGATGTTAGTAACATACA+AGG | - | chr6_4:88313851-88313870 | None:intergenic | 30.0% | |
| CTCAGATAAATGAAATCAGT+AGG | + | chr6_4:88313869-88313888 | Msa1002600:three_prime_UTR | 30.0% | |
| TGAAATCAGTAGGTTTCTTA+AGG | + | chr6_4:88313879-88313898 | Msa1002600:three_prime_UTR | 30.0% | |
| GGATTTCATTATTCAACTCA+AGG | + | chr6_4:88314009-88314028 | Msa1002600:three_prime_UTR | 30.0% | |
| !! | GCATTCTGTGATTGATTTTC+CGG | - | chr6_4:88310361-88310380 | None:intergenic | 35.0% |
| ATAGATGTTTCGTCGATACT+TGG | + | chr6_4:88310720-88310739 | Msa1002600:CDS | 35.0% | |
| ! | CTGCTACTTGTTTGAGAAAT+CGG | + | chr6_4:88310796-88310815 | Msa1002600:CDS | 35.0% |
| AATATAACCTGAAGGGTTCT+AGG | - | chr6_4:88310879-88310898 | None:intergenic | 35.0% | |
| CTTAATTCTACAAGCTAGAC+AGG | - | chr6_4:88311012-88311031 | None:intergenic | 35.0% | |
| ! | GCTAGTATGTGATTTTCGTT+AGG | + | chr6_4:88311044-88311063 | Msa1002600:intron | 35.0% |
| ACACTACTCTTTGAATCCTT+TGG | - | chr6_4:88311220-88311239 | None:intergenic | 35.0% | |
| GAGTAGTGTGTTTAGATCTT+AGG | + | chr6_4:88311231-88311250 | Msa1002600:intron | 35.0% | |
| GCTTCCCTGATACTTATTAT+AGG | - | chr6_4:88311328-88311347 | None:intergenic | 35.0% | |
| AATGTGAACTCATTCTTCTG+TGG | + | chr6_4:88311448-88311467 | Msa1002600:intron | 35.0% | |
| ACTTCATAAATCCCTAGAAG+TGG | - | chr6_4:88311475-88311494 | None:intergenic | 35.0% | |
| AACGATCCATGATATGGTAA+TGG | - | chr6_4:88311573-88311592 | None:intergenic | 35.0% | |
| TCACTTACAAGACTGAGATA+TGG | - | chr6_4:88311690-88311709 | None:intergenic | 35.0% | |
| GCACGTAGAATCGTTAATAT+TGG | + | chr6_4:88311731-88311750 | Msa1002600:intron | 35.0% | |
| !! | ACAATTTTTCGGCAATCCTA+GGG | + | chr6_4:88311754-88311773 | Msa1002600:intron | 35.0% |
| ACAGCAAGGAGAAATATGTT+TGG | - | chr6_4:88311889-88311908 | None:intergenic | 35.0% | |
| ATGAGTTGTGTATGACCTTA+AGG | + | chr6_4:88312112-88312131 | Msa1002600:intron | 35.0% | |
| !!! | TGCTGAAGTGTTTTTTGTGA+TGG | + | chr6_4:88312151-88312170 | Msa1002600:intron | 35.0% |
| TAATAGAGGAAATGAAGGCA+GGG | - | chr6_4:88312257-88312276 | None:intergenic | 35.0% | |
| ATAATAGAGGAAATGAAGGC+AGG | - | chr6_4:88312258-88312277 | None:intergenic | 35.0% | |
| GTTAGGATCCCAAAATTTAC+AGG | + | chr6_4:88312442-88312461 | Msa1002600:intron | 35.0% | |
| ! | GGAGAAAAGCCTGTAAATTT+TGG | - | chr6_4:88312454-88312473 | None:intergenic | 35.0% |
| ! | TTTTACTTGGGATCACAAAG+GGG | - | chr6_4:88312475-88312494 | None:intergenic | 35.0% |
| ! | GATTTTACTTGGGATCACAA+AGG | - | chr6_4:88312477-88312496 | None:intergenic | 35.0% |
| TGTAACTCTTGTGAAATGAC+AGG | + | chr6_4:88312517-88312536 | Msa1002600:intron | 35.0% | |
| AATGTGGCACAAAAGGAAAT+CGG | + | chr6_4:88312557-88312576 | Msa1002600:CDS | 35.0% | |
| GGGAAATACATCAAGATACT+GGG | + | chr6_4:88312578-88312597 | Msa1002600:CDS | 35.0% | |
| CAGATTTATTGAGCTGAAGA+AGG | - | chr6_4:88312673-88312692 | None:intergenic | 35.0% | |
| !! | ATATCTGCTCTGCTTTTACA+AGG | + | chr6_4:88312875-88312894 | Msa1002600:intron | 35.0% |
| TAGTTGGCAAGCCAAATATA+TGG | - | chr6_4:88313205-88313224 | None:intergenic | 35.0% | |
| ! | TTTTGCGTTTGTCTTCTAGT+TGG | - | chr6_4:88313221-88313240 | None:intergenic | 35.0% |
| !! | AACTAAGGTTGATGCTATAG+AGG | + | chr6_4:88313410-88313429 | Msa1002600:CDS | 35.0% |
| !! | ACGAGCATTACTTTTACCTT+CGG | - | chr6_4:88313496-88313515 | None:intergenic | 35.0% |
| !! | GATTGCAAGTGTCGAATATT+TGG | - | chr6_4:88313786-88313805 | None:intergenic | 35.0% |
| ! | TTTCAGTATTCTGGAAAACC+AGG | - | chr6_4:88313822-88313841 | None:intergenic | 35.0% |
| !! | TGTCATTTGGCTTGTTTCTT+AGG | + | chr6_4:88313927-88313946 | Msa1002600:three_prime_UTR | 35.0% |
| CTCTGTACTTGTGTTCTCAA+TGG | - | chr6_4:88310270-88310289 | None:intergenic | 40.0% | |
| !! | TTCTGTGATTGATTTTCCGG+TGG | - | chr6_4:88310358-88310377 | None:intergenic | 40.0% |
| ATCACAGAATGCACATCATG+CGG | + | chr6_4:88310369-88310388 | Msa1002600:CDS | 40.0% | |
| ATTGTCTTTCTTCTACGACG+CGG | - | chr6_4:88310395-88310414 | None:intergenic | 40.0% | |
| GAGACATAGGGGATTATCTT+GGG | - | chr6_4:88310448-88310467 | None:intergenic | 40.0% | |
| !! | GTCTTCTTCTTCGTTGGTTT+CGG | - | chr6_4:88310514-88310533 | None:intergenic | 40.0% |
| TCATAACCGCTTTCTCAACA+TGG | + | chr6_4:88310553-88310572 | Msa1002600:CDS | 40.0% | |
| TAAGGACCATGTTGAGAAAG+CGG | - | chr6_4:88310562-88310581 | None:intergenic | 40.0% | |
| AGGGAAGATTGAAGGTAAAG+CGG | - | chr6_4:88310594-88310613 | None:intergenic | 40.0% | |
| AAAAGGAGAGGGAAGATTGA+AGG | - | chr6_4:88310602-88310621 | None:intergenic | 40.0% | |
| ! | TCAATCTTCCCTCTCCTTTT+CGG | + | chr6_4:88310602-88310621 | Msa1002600:CDS | 40.0% |
| TGTTTCGTCGATACTTGGAT+TGG | + | chr6_4:88310725-88310744 | Msa1002600:CDS | 40.0% | |
| ACTTGTAACTCTCAAGCCAA+AGG | + | chr6_4:88311201-88311220 | Msa1002600:intron | 40.0% | |
| CGTATCTAATGCCGATACTT+TGG | - | chr6_4:88311353-88311372 | None:intergenic | 40.0% | |
| !! | AAGTATCGGCATTAGATACG+AGG | + | chr6_4:88311353-88311372 | Msa1002600:intron | 40.0% |
| ! | ACTGAGATATGGATTGCAAG+GGG | - | chr6_4:88311679-88311698 | None:intergenic | 40.0% |
| ! | GACTGAGATATGGATTGCAA+GGG | - | chr6_4:88311680-88311699 | None:intergenic | 40.0% |
| ! | AGACTGAGATATGGATTGCA+AGG | - | chr6_4:88311681-88311700 | None:intergenic | 40.0% |
| !! | GACAATTTTTCGGCAATCCT+AGG | + | chr6_4:88311753-88311772 | Msa1002600:intron | 40.0% |
| GAATGCTCATAATTCGGCAA+GGG | - | chr6_4:88311860-88311879 | None:intergenic | 40.0% | |
| TGAATGCTCATAATTCGGCA+AGG | - | chr6_4:88311861-88311880 | None:intergenic | 40.0% | |
| AAGAGAGAGATGCATGAGAA+GGG | - | chr6_4:88311914-88311933 | None:intergenic | 40.0% | |
| CCAAGTAGGAGAAGAGAAAA+GGG | - | chr6_4:88311986-88312005 | None:intergenic | 40.0% | |
| ACCAAGTAGGAGAAGAGAAA+AGG | - | chr6_4:88311987-88312006 | None:intergenic | 40.0% | |
| ! | TGAAATAGCAGATAGTGGTG+CGG | - | chr6_4:88312350-88312369 | None:intergenic | 40.0% |
| AATTTCAATTGCCGCCAATG+TGG | + | chr6_4:88312541-88312560 | Msa1002600:CDS | 40.0% | |
| ! | GATTTCCTTTTGTGCCACAT+TGG | - | chr6_4:88312558-88312577 | None:intergenic | 40.0% |
| ATGTGGCACAAAAGGAAATC+GGG | + | chr6_4:88312558-88312577 | Msa1002600:CDS | 40.0% | |
| CGGGAAATACATCAAGATAC+TGG | + | chr6_4:88312577-88312596 | Msa1002600:CDS | 40.0% | |
| ! | TGAAGAAGGGTGCAAAATCT+TGG | - | chr6_4:88312659-88312678 | None:intergenic | 40.0% |
| TCAGCTCAATAAATCTGCTC+AGG | + | chr6_4:88312676-88312695 | Msa1002600:CDS | 40.0% | |
| AATAAATCTGCTCAGGTACC+TGG | + | chr6_4:88312683-88312702 | Msa1002600:intron | 40.0% | |
| !! | TCACATTTTGGTGCAATTCC+AGG | - | chr6_4:88312704-88312723 | None:intergenic | 40.0% |
| GTAAAAGCAGAGCAGATATG+CGG | - | chr6_4:88312874-88312893 | None:intergenic | 40.0% | |
| TCAACCAAAGGGTTGTGTAA+TGG | + | chr6_4:88312932-88312951 | Msa1002600:CDS | 40.0% | |
| TTGTCCATTACACAACCCTT+TGG | - | chr6_4:88312939-88312958 | None:intergenic | 40.0% | |
| AATGGACAATCAGTTAGACC+TGG | + | chr6_4:88312950-88312969 | Msa1002600:CDS | 40.0% | |
| GATGTCCAATGATCACTTTG+TGG | + | chr6_4:88312980-88312999 | Msa1002600:CDS | 40.0% | |
| CACTACCACAAAGTGATCAT+TGG | - | chr6_4:88312988-88313007 | None:intergenic | 40.0% | |
| CAGTTCCTGAAATGCAATGT+AGG | - | chr6_4:88313106-88313125 | None:intergenic | 40.0% | |
| CTACATTGCATTTCAGGAAC+TGG | + | chr6_4:88313104-88313123 | Msa1002600:intron | 40.0% | |
| TTGGCAAGCCAAATATATGG+CGG | - | chr6_4:88313202-88313221 | None:intergenic | 40.0% | |
| TACTTTGCAAATTTCGGCCT+GGG | - | chr6_4:88313244-88313263 | None:intergenic | 40.0% | |
| TTACTTTGCAAATTTCGGCC+TGG | - | chr6_4:88313245-88313264 | None:intergenic | 40.0% | |
| GCCGAAATTTGCAAAGTAAC+TGG | + | chr6_4:88313246-88313265 | Msa1002600:CDS | 40.0% | |
| CCAGAAGCAATTAAGGTTGT+GGG | - | chr6_4:88313378-88313397 | None:intergenic | 40.0% | |
| TCCAGAAGCAATTAAGGTTG+TGG | - | chr6_4:88313379-88313398 | None:intergenic | 40.0% | |
| AGAACGTCCAGAAGCAATTA+AGG | - | chr6_4:88313385-88313404 | None:intergenic | 40.0% | |
| TGGACGTTCTTCAACAACTA+AGG | + | chr6_4:88313395-88313414 | Msa1002600:CDS | 40.0% | |
| ! | CTATTCAGCAGTCAACGTTT+TGG | + | chr6_4:88313532-88313551 | Msa1002600:CDS | 40.0% |
| CAAGTTCAAGCTCTGTTATG+AGG | + | chr6_4:88313730-88313749 | Msa1002600:CDS | 40.0% | |
| ATATTTGGAGGAGCAGATGA+AGG | - | chr6_4:88313771-88313790 | None:intergenic | 40.0% | |
| !! | TGCAAGTGTCGAATATTTGG+AGG | - | chr6_4:88313783-88313802 | None:intergenic | 40.0% |
| !! | GTGTGAATTTTGTTGACTGC+TGG | + | chr6_4:88313949-88313968 | Msa1002600:three_prime_UTR | 40.0% |
| CGAGACATAGGGGATTATCT+TGG | - | chr6_4:88310449-88310468 | None:intergenic | 45.0% | |
| ATCTGGTGTGACGAGACATA+GGG | - | chr6_4:88310460-88310479 | None:intergenic | 45.0% | |
| !! | TGTTGGTTTGGTTGAGAGTG+GGG | - | chr6_4:88310491-88310510 | None:intergenic | 45.0% |
| !! | GTGTTGGTTTGGTTGAGAGT+GGG | - | chr6_4:88310492-88310511 | None:intergenic | 45.0% |
| !! | TTCTTCGTTGGTTTCGGTGT+TGG | - | chr6_4:88310508-88310527 | None:intergenic | 45.0% |
| GAATGGGTCTTCTTCTTCGT+TGG | - | chr6_4:88310520-88310539 | None:intergenic | 45.0% | |
| GGGAAGATTGAAGGTAAAGC+GGG | - | chr6_4:88310593-88310612 | None:intergenic | 45.0% | |
| ! | CAATCTTCCCTCTCCTTTTC+GGG | + | chr6_4:88310603-88310622 | Msa1002600:CDS | 45.0% |
| ! | AAGGTATCCCGAAAAGGAGA+GGG | - | chr6_4:88310613-88310632 | None:intergenic | 45.0% |
| TCAAGAACCTAGAACCCTTC+AGG | + | chr6_4:88310869-88310888 | Msa1002600:CDS | 45.0% | |
| !! | CAGGGAAGCATCCAAAGTAT+CGG | + | chr6_4:88311339-88311358 | Msa1002600:intron | 45.0% |
| TTCTTCTGTGGTCCACTTCT+AGG | + | chr6_4:88311460-88311479 | Msa1002600:intron | 45.0% | |
| TCTTCTGTGGTCCACTTCTA+GGG | + | chr6_4:88311461-88311480 | Msa1002600:intron | 45.0% | |
| TGCTGCTCGTCTACATAGTT+GGG | - | chr6_4:88311507-88311526 | None:intergenic | 45.0% | |
| ATGCTGCTCGTCTACATAGT+TGG | - | chr6_4:88311508-88311527 | None:intergenic | 45.0% | |
| ACCACTCGGTTTCTTGGATT+AGG | + | chr6_4:88311784-88311803 | Msa1002600:intron | 45.0% | |
| ACCTAATCCAAGAAACCGAG+TGG | - | chr6_4:88311788-88311807 | None:intergenic | 45.0% | |
| CAAGAGAGAGATGCATGAGA+AGG | - | chr6_4:88311915-88311934 | None:intergenic | 45.0% | |
| AAAGGAAATGCGTGCAACAG+AGG | - | chr6_4:88311949-88311968 | None:intergenic | 45.0% | |
| ! | AGGGAGAGTGTGTCAGATAA+AGG | - | chr6_4:88311967-88311986 | None:intergenic | 45.0% |
| ! | CCCTTTTCTCTTCTCCTACT+TGG | + | chr6_4:88311983-88312002 | Msa1002600:intron | 45.0% |
| TGTCAGAGAGAACACCAAGT+AGG | - | chr6_4:88312000-88312019 | None:intergenic | 45.0% | |
| ! | GAAATAGCAGATAGTGGTGC+GGG | - | chr6_4:88312349-88312368 | None:intergenic | 45.0% |
| ! | TTCCTTTTGTGCCACATTGG+CGG | - | chr6_4:88312555-88312574 | None:intergenic | 45.0% |
| TGGCTCCTACATTGCATTTC+AGG | + | chr6_4:88313098-88313117 | Msa1002600:intron | 45.0% | |
| AGAAGACAAACGCAAAACCC+AGG | + | chr6_4:88313224-88313243 | Msa1002600:CDS | 45.0% | |
| ACAGCTGGGGTGTAATTAGA+GGG | - | chr6_4:88313336-88313355 | None:intergenic | 45.0% | |
| AACAGCTGGGGTGTAATTAG+AGG | - | chr6_4:88313337-88313356 | None:intergenic | 45.0% | |
| CCCACAACCTTAATTGCTTC+TGG | + | chr6_4:88313375-88313394 | Msa1002600:CDS | 45.0% | |
| ! | TCGGCCTCATTAGGTTTGTT+TGG | - | chr6_4:88313477-88313496 | None:intergenic | 45.0% |
| AACAAACCTAATGAGGCCGA+AGG | + | chr6_4:88313477-88313496 | Msa1002600:CDS | 45.0% | |
| ! | CTTTTACCTTCGGCCTCATT+AGG | - | chr6_4:88313486-88313505 | None:intergenic | 45.0% |
| ACTGCTGAATAGCCGATGAT+TGG | - | chr6_4:88313524-88313543 | None:intergenic | 45.0% | |
| !! | TGATGATTTTGGGTCGCACT+GGG | - | chr6_4:88313570-88313589 | None:intergenic | 45.0% |
| !! | TTGATGATTTTGGGTCGCAC+TGG | - | chr6_4:88313571-88313590 | None:intergenic | 45.0% |
| CCATTTGTGACCTCTACCAT+GGG | - | chr6_4:88313657-88313676 | None:intergenic | 45.0% | |
| ACCATTTGTGACCTCTACCA+TGG | - | chr6_4:88313658-88313677 | None:intergenic | 45.0% | |
| !! | GTCACAAATGGTGCTGGTAT+CGG | + | chr6_4:88313666-88313685 | Msa1002600:CDS | 45.0% |
| ! | AGGAGGACTGTAAAGTTGGT+TGG | - | chr6_4:88313706-88313725 | None:intergenic | 45.0% |
| AAGCAGGAGGACTGTAAAGT+TGG | - | chr6_4:88313710-88313729 | None:intergenic | 45.0% | |
| ACAGAGCTTGAACTTGAAGC+AGG | - | chr6_4:88313726-88313745 | None:intergenic | 45.0% | |
| ! | CTCTGTTATGAGGTCGCTTT+CGG | + | chr6_4:88313740-88313759 | Msa1002600:CDS | 45.0% |
| ! | CAATCGTCTAAGACAATGCC+TGG | + | chr6_4:88313801-88313820 | Msa1002600:CDS | 45.0% |
| ! | GAAGTGCCCATACTGTTCAG+CGG | + | chr6_4:88310308-88310327 | Msa1002600:CDS | 50.0% |
| ! | CGGTGGTTGTTGTTGTGCAA+CGG | - | chr6_4:88310341-88310360 | None:intergenic | 50.0% |
| CGTTGCACAACAACAACCAC+CGG | + | chr6_4:88310339-88310358 | Msa1002600:CDS | 50.0% | |
| GTGGAAGATGTGGTGAGGAT+GGG | - | chr6_4:88310418-88310437 | None:intergenic | 50.0% | |
| TCTGGTGTGACGAGACATAG+GGG | - | chr6_4:88310459-88310478 | None:intergenic | 50.0% | |
| GATCTGGTGTGACGAGACAT+AGG | - | chr6_4:88310461-88310480 | None:intergenic | 50.0% | |
| !! | TTGGTTTGGTTGAGAGTGGG+GGG | - | chr6_4:88310489-88310508 | None:intergenic | 50.0% |
| !! | GTTGGTTTGGTTGAGAGTGG+GGG | - | chr6_4:88310490-88310509 | None:intergenic | 50.0% |
| !! | GGTGTTGGTTTGGTTGAGAG+TGG | - | chr6_4:88310493-88310512 | None:intergenic | 50.0% |
| !! | CGTTGGTTTCGGTGTTGGTT+TGG | - | chr6_4:88310503-88310522 | None:intergenic | 50.0% |
| AAAGCGGTTATGAAGCCCGT+GGG | - | chr6_4:88310546-88310565 | None:intergenic | 50.0% | |
| ! | GATTGAAGGTAAAGCGGGCT+GGG | - | chr6_4:88310588-88310607 | None:intergenic | 50.0% |
| AGATTGAAGGTAAAGCGGGC+TGG | - | chr6_4:88310589-88310608 | None:intergenic | 50.0% | |
| ! | CAAGGTATCCCGAAAAGGAG+AGG | - | chr6_4:88310614-88310633 | None:intergenic | 50.0% |
| !! | CTCCTTTTCGGGATACCTTG+CGG | + | chr6_4:88310614-88310633 | Msa1002600:CDS | 50.0% |
| ! | TTCCGCAAGGTATCCCGAAA+AGG | - | chr6_4:88310619-88310638 | None:intergenic | 50.0% |
| ! | GAGTACGTTCAAGTTCCGCA+AGG | - | chr6_4:88310632-88310651 | None:intergenic | 50.0% |
| TGCTACTGCTGCTCTTGTTC+AGG | + | chr6_4:88310833-88310852 | Msa1002600:CDS | 50.0% | |
| GCTGCTCGTCTACATAGTTG+GGG | - | chr6_4:88311506-88311525 | None:intergenic | 50.0% | |
| TCGATCACCACTCGGTTTCT+TGG | + | chr6_4:88311778-88311797 | Msa1002600:intron | 50.0% | |
| AGGAAATGAAGGCAGGGCAT+AGG | - | chr6_4:88312251-88312270 | None:intergenic | 50.0% | |
| GACAATCAGTTAGACCTGGC+TGG | + | chr6_4:88312954-88312973 | Msa1002600:CDS | 50.0% | |
| CAGGAACTGGCTACTCACAT+AGG | + | chr6_4:88313117-88313136 | Msa1002600:intron | 50.0% | |
| ACAAATGCTTCTGCACTCGC+AGG | + | chr6_4:88313154-88313173 | Msa1002600:CDS | 50.0% | |
| CTCAGCTGCCGCCATATATT+TGG | + | chr6_4:88313191-88313210 | Msa1002600:CDS | 50.0% | |
| TGCTCGTGCAAGCCAATCAT+CGG | + | chr6_4:88313509-88313528 | Msa1002600:CDS | 50.0% | |
| !! | CTACCATGGGTTCAGGTTGT+TGG | - | chr6_4:88313644-88313663 | None:intergenic | 50.0% |
| ACAACCTGAACCCATGGTAG+AGG | + | chr6_4:88313644-88313663 | Msa1002600:CDS | 50.0% | |
| CCCATGGTAGAGGTCACAAA+TGG | + | chr6_4:88313654-88313673 | Msa1002600:CDS | 50.0% | |
| GTAGAGGTCACAAATGGTGC+TGG | + | chr6_4:88313660-88313679 | Msa1002600:CDS | 50.0% | |
| GAGCTTGAACTTGAAGCAGG+AGG | - | chr6_4:88313723-88313742 | None:intergenic | 50.0% | |
| TTTGGAGGAGCAGATGAAGG+AGG | - | chr6_4:88313768-88313787 | None:intergenic | 50.0% | |
| CTTGCGCCGCTGAACAGTAT+GGG | - | chr6_4:88310317-88310336 | None:intergenic | 55.0% | |
| GGTGGAAGATGTGGTGAGGA+TGG | - | chr6_4:88310419-88310438 | None:intergenic | 55.0% | |
| TTTGGTTGAGAGTGGGGGGA+GGG | - | chr6_4:88310485-88310504 | None:intergenic | 55.0% | |
| AGAAGACCCATTCGAGCCCA+CGG | + | chr6_4:88310527-88310546 | Msa1002600:CDS | 55.0% | |
| GAAAGCGGTTATGAAGCCCG+TGG | - | chr6_4:88310547-88310566 | None:intergenic | 55.0% | |
| GCATGAGAAGGGAGACAGCA+AGG | - | chr6_4:88311903-88311922 | None:intergenic | 55.0% | |
| GGAAATGCGTGCAACAGAGG+AGG | - | chr6_4:88311946-88311965 | None:intergenic | 55.0% | |
| TGCCGCCAATGTGGCACAAA+AGG | + | chr6_4:88312550-88312569 | Msa1002600:CDS | 55.0% | |
| ATCAGTTAGACCTGGCTGGC+TGG | + | chr6_4:88312958-88312977 | Msa1002600:CDS | 55.0% | |
| GCGGCAGCTGAGATGCTAAT+TGG | - | chr6_4:88313183-88313202 | None:intergenic | 55.0% | |
| TTACACCCCAGCTGTTCCTC+CGG | + | chr6_4:88313341-88313360 | Msa1002600:CDS | 55.0% | |
| TTGGGTCGCACTGGGAAGTT+GGG | - | chr6_4:88313562-88313581 | None:intergenic | 55.0% | |
| TTTGGGTCGCACTGGGAAGT+TGG | - | chr6_4:88313563-88313582 | None:intergenic | 55.0% | |
| !! | CCATGGGTTCAGGTTGTTGG+TGG | - | chr6_4:88313641-88313660 | None:intergenic | 55.0% |
| CCACCAACAACCTGAACCCA+TGG | + | chr6_4:88313638-88313657 | Msa1002600:CDS | 55.0% | |
| GTGACCTCTACCATGGGTTC+AGG | - | chr6_4:88313651-88313670 | None:intergenic | 55.0% | |
| CCTTGCGCCGCTGAACAGTA+TGG | - | chr6_4:88310318-88310337 | None:intergenic | 60.0% | |
| CCATACTGTTCAGCGGCGCA+AGG | + | chr6_4:88310315-88310334 | Msa1002600:CDS | 60.0% | |
| CGCAGGTGGAAGATGTGGTG+AGG | - | chr6_4:88310423-88310442 | None:intergenic | 60.0% | |
| GATTATCTTGGGCGCGCAGG+TGG | - | chr6_4:88310437-88310456 | None:intergenic | 60.0% | |
| GTTTGGTTGAGAGTGGGGGG+AGG | - | chr6_4:88310486-88310505 | None:intergenic | 60.0% | |
| GAAGACCCATTCGAGCCCAC+GGG | + | chr6_4:88310528-88310547 | Msa1002600:CDS | 60.0% | |
| TGAAGCCCGTGGGCTCGAAT+GGG | - | chr6_4:88310536-88310555 | None:intergenic | 60.0% | |
| ATGAAGCCCGTGGGCTCGAA+TGG | - | chr6_4:88310537-88310556 | None:intergenic | 60.0% | |
| !! | GTAAAGCGGGCTGGGCTCTA+AGG | - | chr6_4:88310580-88310599 | None:intergenic | 60.0% |
| CCTAGGGCTCGATCACCACT+CGG | + | chr6_4:88311770-88311789 | Msa1002600:intron | 60.0% | |
| CATTGGACATCCAGCCAGCC+AGG | - | chr6_4:88312971-88312990 | None:intergenic | 60.0% | |
| GTTGTGGGAAATGCCCGCTC+CGG | - | chr6_4:88313363-88313382 | None:intergenic | 60.0% | |
| GGGGATTATCTTGGGCGCGC+AGG | - | chr6_4:88310440-88310459 | None:intergenic | 65.0% | |
| AGAGTGGGGGGAGGGAGATC+TGG | - | chr6_4:88310477-88310496 | None:intergenic | 65.0% | |
| CCGAGTGGTGATCGAGCCCT+AGG | - | chr6_4:88311773-88311792 | None:intergenic | 65.0% | |
| GGGCGCGCAGGTGGAAGATG+TGG | - | chr6_4:88310428-88310447 | None:intergenic | 70.0% | |
| CCGCTCCGGAGGAACAGCTG+GGG | - | chr6_4:88313349-88313368 | None:intergenic | 70.0% | |
| CCCCAGCTGTTCCTCCGGAG+CGG | + | chr6_4:88313346-88313365 | Msa1002600:CDS | 70.0% | |
| CCCGCTCCGGAGGAACAGCT+GGG | - | chr6_4:88313350-88313369 | None:intergenic | 70.0% | |
| CCCAGCTGTTCCTCCGGAGC+GGG | + | chr6_4:88313347-88313366 | Msa1002600:CDS | 70.0% | |
| GTGGGAAATGCCCGCTCCGG+AGG | - | chr6_4:88313360-88313379 | None:intergenic | 70.0% | |
| GCCCGCTCCGGAGGAACAGC+TGG | - | chr6_4:88313351-88313370 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 88310250 | 88314073 | 88310250 | ID=Msa1002600;Name=Msa1002600 |
| chr6_4 | mRNA | 88310250 | 88314073 | 88310250 | ID=Msa1002600-mRNA-1;Parent=Msa1002600;Name=Msa1002600-mRNA-1;_AED=0.04;_eAED=0.04;_QI=56|0.33|0.75|0.75|1|1|4|234|522 |
| chr6_4 | exon | 88310250 | 88310890 | 88310250 | ID=Msa1002600-mRNA-1:exon:17223;Parent=Msa1002600-mRNA-1 |
| chr6_4 | exon | 88312539 | 88312697 | 88312539 | ID=Msa1002600-mRNA-1:exon:17224;Parent=Msa1002600-mRNA-1 |
| chr6_4 | exon | 88312897 | 88313001 | 88312897 | ID=Msa1002600-mRNA-1:exon:17225;Parent=Msa1002600-mRNA-1 |
| chr6_4 | exon | 88313120 | 88314073 | 88313120 | ID=Msa1002600-mRNA-1:exon:17226;Parent=Msa1002600-mRNA-1 |
| chr6_4 | five_prime_UTR | 88310250 | 88310305 | 88310250 | ID=Msa1002600-mRNA-1:five_prime_utr;Parent=Msa1002600-mRNA-1 |
| chr6_4 | CDS | 88310306 | 88310890 | 88310306 | ID=Msa1002600-mRNA-1:cds;Parent=Msa1002600-mRNA-1 |
| chr6_4 | CDS | 88312539 | 88312697 | 88312539 | ID=Msa1002600-mRNA-1:cds;Parent=Msa1002600-mRNA-1 |
| chr6_4 | CDS | 88312897 | 88313001 | 88312897 | ID=Msa1002600-mRNA-1:cds;Parent=Msa1002600-mRNA-1 |
| chr6_4 | CDS | 88313120 | 88313839 | 88313120 | ID=Msa1002600-mRNA-1:cds;Parent=Msa1002600-mRNA-1 |
| chr6_4 | three_prime_UTR | 88313840 | 88314073 | 88313840 | ID=Msa1002600-mRNA-1:three_prime_utr;Parent=Msa1002600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
