AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1253400

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1253400 MtrunA17_Chr2g0328391 54.601 163 43 3 20 176 212 349 5.61e-44 160
Msa1253400 MtrunA17_Chr2g0323051 53.982 113 42 4 215 327 211 313 6.30e-27 111
Msa1253400 MtrunA17_Chr4g0031711 63.889 72 26 0 105 176 340 411 1.18e-25 108
Msa1253400 MtrunA17_Chr4g0031721 42.748 131 58 1 95 208 285 415 8.09e-24 102
Msa1253400 MtrunA17_Chr4g0031701 62.857 70 26 0 107 176 235 304 4.78e-23 100
Msa1253400 MtrunA17_Chr3g0140681 76.667 60 8 1 186 239 194 253 9.69e-23 98.2
Msa1253400 MtrunA17_Chr4g0031731 61.429 70 27 0 107 176 235 304 2.40e-22 98.2
Msa1253400 MtrunA17_Chr7g0238891 46.903 113 52 2 108 212 354 466 2.85e-22 98.2
Msa1253400 MtrunA17_Chr4g0023601 58.904 73 27 1 223 292 135 207 2.54e-20 92.0
Msa1253400 MtrunA17_Chr2g0328381 53.165 79 37 0 97 175 246 324 3.19e-19 89.0
Msa1253400 MtrunA17_Chr2g0328361 57.812 64 27 0 112 175 260 323 1.42e-18 87.0
Msa1253400 MtrunA17_Chr2g0328341 46.667 90 46 1 86 175 234 321 1.06e-17 84.3
Msa1253400 MtrunA17_Chr2g0328401 55.556 72 30 1 106 175 268 339 1.75e-16 80.9
Msa1253400 MtrunA17_Chr4g0031741 62.500 56 21 0 120 175 278 333 1.03e-15 78.6
Msa1253400 MtrunA17_Chr2g0328411 39.098 133 66 5 56 175 208 338 1.73e-14 74.7
Msa1253400 MtrunA17_Chr2g0328431 38.983 118 63 3 65 175 223 338 4.74e-14 73.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1253400 AT2G32290.1 52.222 90 41 2 239 328 219 306 4.63e-21 94.7
Msa1253400 AT1G07530.1 51.765 85 39 1 93 175 361 445 3.42e-20 92.4
Msa1253400 AT4G15210.3 66.667 54 18 0 239 292 103 156 1.92e-19 89.4
Msa1253400 AT4G15210.4 66.667 54 18 0 239 292 103 156 1.92e-19 89.4
Msa1253400 AT4G15210.2 66.667 54 18 0 239 292 156 209 1.99e-19 89.4
Msa1253400 AT4G15210.1 66.667 54 18 0 239 292 156 209 2.22e-19 89.4
Msa1253400 AT1G07520.2 55.814 86 25 3 108 186 139 218 1.37e-18 87.4
Msa1253400 AT1G07520.4 55.814 86 25 3 108 186 139 218 1.37e-18 87.4
Msa1253400 AT1G07520.1 61.765 68 23 1 108 175 303 367 1.82e-18 87.0
Msa1253400 AT1G07520.3 61.765 68 23 1 108 175 304 368 1.84e-18 87.0
Msa1253400 AT2G29060.2 38.843 121 57 2 106 209 264 384 2.02e-18 87.0
Msa1253400 AT2G29060.1 38.843 121 57 2 106 209 301 421 2.40e-18 86.7
Msa1253400 AT2G37650.1 52.703 74 35 0 114 187 335 408 2.99e-17 83.6
Msa1253400 AT2G37650.2 52.703 74 35 0 114 187 323 396 3.28e-17 83.6
Msa1253400 AT2G29065.1 50.000 84 37 1 92 175 223 301 9.42e-15 75.9
Msa1253400 AT5G59450.1 35.526 152 86 4 24 175 137 276 1.03e-13 72.8
Msa1253400 AT3G46600.1 43.299 97 52 2 79 175 168 261 6.03e-13 70.1
Msa1253400 AT3G46600.3 43.299 97 52 2 79 175 136 229 8.50e-13 69.7
Msa1253400 AT4G00490.1 53.704 54 25 0 239 292 236 289 1.26e-12 69.3
Msa1253400 AT2G45880.1 31.707 123 61 3 193 292 320 442 1.11e-11 66.6
Msa1253400 AT5G45300.3 46.296 54 29 0 239 292 410 463 3.25e-11 65.1
Msa1253400 AT5G45300.1 46.296 54 29 0 239 292 396 449 3.72e-11 64.7
Msa1253400 AT5G45300.2 46.296 54 29 0 239 292 394 447 3.82e-11 64.7

Find 105 sgRNAs with CRISPR-Local

Find 462 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATATGCTTATAGATTAATT+AGG 0.166195 8_2:-50848609 Msa1253400:three_prime_UTR
TATGATAATTTAATCAAAAT+TGG 0.267934 8_2:-50848538 Msa1253400:three_prime_UTR
TCTCGTCTTTCGCGGTTTCT+TGG 0.271778 8_2:-50849892 Msa1253400:CDS
ATATGCTTATAGATTAATTA+GGG 0.277830 8_2:-50848608 Msa1253400:three_prime_UTR
CTTCAAATAGTCAGCCATTC+TGG 0.282618 8_2:+50848757 None:intergenic
AGTGACTATGACAATGTAAT+TGG 0.287106 8_2:-50851131 Msa1253400:CDS
TACCATTAATACCTCTTCTA+TGG 0.297338 8_2:+50854837 None:intergenic
GAAGAGTTATAGAGAGAATA+TGG 0.309022 8_2:-50849349 Msa1253400:CDS
GGCTGGGTATTTCCTGGTAT+TGG 0.319528 8_2:-50849234 Msa1253400:CDS
GGCCATAGAAGAGGTATTAA+TGG 0.329008 8_2:-50854839 Msa1253400:CDS
GATGGAGGAAGAAGGGAAAT+TGG 0.330889 8_2:-50855455 Msa1253400:CDS
AGAAAATTACCTTGTAAGTA+TGG 0.331370 8_2:+50854802 None:intergenic
AGGAAGCATTCTTGTCCTTC+AGG 0.331779 8_2:-50851695 Msa1253400:CDS
GTTATGTGGATTTCACTCTT+TGG 0.332758 8_2:-50849926 Msa1253400:CDS
TCGCGGTTTCTTGGTAAAAC+AGG 0.335407 8_2:-50849883 Msa1253400:CDS
AATCCTGGACTCACCGCTTA+TGG 0.358745 8_2:+50848868 None:intergenic
TTTCTGCTTACTTTCAGATA+TGG 0.359746 8_2:+50851101 None:intergenic
CCGCTTATGGTGACATCATA+AGG 0.359764 8_2:+50848881 None:intergenic
TCCCTCTCATGCATGATATC+TGG 0.374941 8_2:+50848838 None:intergenic
AAGGGAGGGAGAGGAGAAGA+AGG 0.375659 8_2:-50855488 Msa1253400:CDS
AAGCTTAATAGCAACCTTAC+TGG 0.376747 8_2:-50848581 Msa1253400:three_prime_UTR
TGTGGATTTGAGGACCCTTT+TGG 0.385294 8_2:-50851783 Msa1253400:CDS
CTTTAGGTTCCTTTGTTATG+TGG 0.393628 8_2:-50849940 Msa1253400:intron
TGCCTAGGCTGGGTATTTCC+TGG 0.407995 8_2:-50849240 Msa1253400:CDS
AGAAGGGAAATTGGAGAAGA+AGG 0.422017 8_2:-50855446 Msa1253400:CDS
ATGAATTGTTGAAGCAGAAT+AGG 0.424251 8_2:-50851715 Msa1253400:CDS
CTGTGTCTGCTAATGACAAT+AGG 0.426533 8_2:-50851745 Msa1253400:CDS
ATAAGGGCTGGTGCACCTAC+TGG 0.427494 8_2:+50848898 None:intergenic
AATTTCCCTTCTTCCTCCAT+CGG 0.440960 8_2:+50855457 None:intergenic
ATAGTCAGCCATTCTGGCTC+TGG 0.443426 8_2:+50848763 None:intergenic
GAACGAGAGAAGGGAGGGAG+AGG 0.446128 8_2:-50855497 Msa1253400:CDS
TATATCTATATATATGTTCA+AGG 0.447915 8_2:+50848673 None:intergenic
AGAGGGATGTTGTGGATTTG+AGG 0.451718 8_2:-50851793 Msa1253400:CDS
ACACAGGTTGGTGAACTTGA+TGG 0.468419 8_2:-50851848 Msa1253400:CDS
ATATCTGGCCTCACTAATCC+TGG 0.482839 8_2:+50848853 None:intergenic
AAACAGCATCTCGTCTTTCG+CGG 0.485483 8_2:-50849900 Msa1253400:CDS
GAGGTAGGACTTGGCCCTGC+TGG 0.486945 8_2:-50849291 Msa1253400:CDS
CGAAGAAACAAGGGAGGAAG+AGG 0.489890 8_2:-50851811 Msa1253400:CDS
AAGAAGCCGATGGAGGAAGA+AGG 0.492336 8_2:-50855463 Msa1253400:CDS
CTTATAAGCGTGTACGTGGC+AGG 0.500665 8_2:-50849039 Msa1253400:intron
AAACAGAACGAGAGAAGGGA+GGG 0.502519 8_2:-50855502 Msa1253400:CDS
TCACCATAAGCGGTGAGTCC+AGG 0.505916 8_2:-50848871 Msa1253400:CDS
CGCTTATGGTGACATCATAA+GGG 0.505983 8_2:+50848882 None:intergenic
CGCGGTTTCTTGGTAAAACA+GGG 0.510516 8_2:-50849882 Msa1253400:CDS
ACCTCCTCTTCTTCTCCAGA+TGG 0.522445 8_2:-50849824 Msa1253400:intron
AAAGCTTAATGTAAGAATCT+CGG 0.527749 8_2:+50849093 None:intergenic
AGGGAGGAAGAGGGATGTTG+TGG 0.530372 8_2:-50851801 Msa1253400:CDS
TTGAGATTCCAGAGCCAGAA+TGG 0.530384 8_2:-50848771 Msa1253400:three_prime_UTR
AGATATCTAAGTTCTCCAGC+AGG 0.532605 8_2:+50849276 None:intergenic
ATGGTGAAATCAAGGTCGTA+AGG 0.534375 8_2:-50854885 Msa1253400:CDS
AGGTGATGCATCACAGAGAA+TGG 0.535230 8_2:-50851675 Msa1253400:CDS
TTGTCAAATATGAACCAGTA+AGG 0.535459 8_2:+50848567 None:intergenic
AAATTGGAAATGCAGGGGAC+AGG 0.536511 8_2:-50848924 Msa1253400:intron
CTCTGTGATGCATCACCTGA+AGG 0.537655 8_2:+50851680 None:intergenic
TTATCTCTTAATTAATGACC+AGG 0.547439 8_2:-50855734 None:intergenic
CTTGTGCACACAGAACCAAA+AGG 0.550869 8_2:+50851768 None:intergenic
TATGGTGACATCATAAGGGC+TGG 0.556208 8_2:+50848886 None:intergenic
AAAAGAAGGAAAACAGAACA+CGG 0.558132 8_2:-50855547 Msa1253400:CDS
TACATGCCATGGTGAAATCA+AGG 0.560190 8_2:-50854893 Msa1253400:CDS
AATGGCTGACTATTTGAAGC+AGG 0.562267 8_2:-50848753 Msa1253400:three_prime_UTR
GAAGAAGGAAAAGAAGCCGA+TGG 0.563967 8_2:-50855473 Msa1253400:CDS
CTCCAAATACAAAATTTCCT+CGG 0.565604 8_2:-50848815 Msa1253400:three_prime_UTR
CGAACCATCTGGAGAAGAAG+AGG 0.566975 8_2:+50849820 None:intergenic
GCTTTACTCATGATGCTGAA+AGG 0.577029 8_2:-50849075 Msa1253400:CDS
AAAACAGAACGAGAGAAGGG+AGG 0.577096 8_2:-50855503 Msa1253400:CDS
TTGTGCACACAGAACCAAAA+GGG 0.577974 8_2:+50851769 None:intergenic
CCTTATGATGTCACCATAAG+CGG 0.579231 8_2:-50848881 Msa1253400:CDS
AGAAGCCGATGGAGGAAGAA+GGG 0.579655 8_2:-50855462 Msa1253400:CDS
AAAGAAGGAAAACAGAACAC+GGG 0.584884 8_2:-50855546 Msa1253400:CDS
ATGCTTATAGATTAATTAGG+GGG 0.585937 8_2:-50848606 Msa1253400:three_prime_UTR
GAAAGATAAGGCCATAGAAG+AGG 0.588351 8_2:-50854848 Msa1253400:CDS
GCCAGATATCATGCATGAGA+GGG 0.594778 8_2:-50848839 Msa1253400:exon
GGCCAGATATCATGCATGAG+AGG 0.594930 8_2:-50848840 Msa1253400:exon
AATTGAAGCTAAGAAAGATA+AGG 0.595945 8_2:-50854860 Msa1253400:CDS
ATAGACATTGAGGTAGGACT+TGG 0.597655 8_2:-50849300 Msa1253400:CDS
TGAGCTACTGATAGACATTG+AGG 0.599509 8_2:-50849310 Msa1253400:CDS
TGGTGAACTTGATGGAGGGA+AGG 0.605242 8_2:-50851840 Msa1253400:CDS
ACTAAGCCACCATACTTACA+AGG 0.607997 8_2:-50854811 Msa1253400:intron
GAATGCGATTGAAGCGCGCA+TGG 0.609128 8_2:-50851639 Msa1253400:intron
CAGTCTTATAAGCGTGTACG+TGG 0.609552 8_2:-50849043 Msa1253400:CDS
CGGAGATCCTTAAAAGCTCG+AGG 0.614079 8_2:-50848795 Msa1253400:three_prime_UTR
AAGGCACGTTCGAAGAAACA+AGG 0.620215 8_2:-50851821 Msa1253400:CDS
AAATTACCTTGTAAGTATGG+TGG 0.624420 8_2:+50854805 None:intergenic
AATGAACTTGCTACATGCCA+TGG 0.628116 8_2:-50854904 Msa1253400:CDS
TATTTGAAGCAGGATGGCAA+AGG 0.629381 8_2:-50848743 Msa1253400:three_prime_UTR
ACATTAAATTCTCCAATACC+AGG 0.631717 8_2:+50849222 None:intergenic
GATATCTAAGTTCTCCAGCA+GGG 0.632849 8_2:+50849277 None:intergenic
CAGGTTGGTGAACTTGATGG+AGG 0.633962 8_2:-50851845 Msa1253400:CDS
TACCAGGAAATACCCAGCCT+AGG 0.637604 8_2:+50849238 None:intergenic
TGGTGAAATCAAGGTCGTAA+GGG 0.637782 8_2:-50854884 Msa1253400:CDS
CTACTGATAGACATTGAGGT+AGG 0.639731 8_2:-50849306 Msa1253400:CDS
AGGTTGGTGAACTTGATGGA+GGG 0.640702 8_2:-50851844 Msa1253400:CDS
GCTGACTATTTGAAGCAGGA+TGG 0.643683 8_2:-50848749 Msa1253400:three_prime_UTR
GAAGGAAAAGAAGCCGATGG+AGG 0.645079 8_2:-50855470 Msa1253400:CDS
ACCATCTGGAGAAGAAGAGG+AGG 0.646740 8_2:+50849823 None:intergenic
GAAGAAACAAGGGAGGAAGA+GGG 0.647199 8_2:-50851810 Msa1253400:CDS
TTACGACCTTGATTTCACCA+TGG 0.665301 8_2:+50854887 None:intergenic
CGGTGAGTCCAGGATTAGTG+AGG 0.671978 8_2:-50848861 Msa1253400:CDS
GCAGGGGACAGGCTTCCAGT+AGG 0.671994 8_2:-50848913 Msa1253400:intron
GAGTGAAATCCACATAACAA+AGG 0.672556 8_2:+50849931 None:intergenic
TATGCTTATAGATTAATTAG+GGG 0.673591 8_2:-50848607 Msa1253400:three_prime_UTR
AGTGGTGGAGAGTAGAACAC+AGG 0.692386 8_2:-50851864 Msa1253400:CDS
GTGGAGAGTAGAACACAGGT+TGG 0.695448 8_2:-50851860 Msa1253400:CDS
CACGTTCGAAGAAACAAGGG+AGG 0.709283 8_2:-50851817 Msa1253400:CDS
AGGCACGTTCGAAGAAACAA+GGG 0.717525 8_2:-50851820 Msa1253400:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATGGTAAATTAATTAAT+TGG - chr8_2:50848637-50848656 Msa1253400:three_prime_UTR 10.0%
!!! TTGTTCATAATTATTTTTTA+TGG + chr8_2:50849309-50849328 None:intergenic 10.0%
!!! TATTATGATTTATAGTTTTT+TGG - chr8_2:50849661-50849680 Msa1253400:intron 10.0%
!! ATATATATTTCATAAAAGTT+TGG + chr8_2:50850382-50850401 None:intergenic 10.0%
!!! ATTTTAAAAAATGTTTTTGA+GGG + chr8_2:50850493-50850512 None:intergenic 10.0%
!!! TATTTTAAAAAATGTTTTTG+AGG + chr8_2:50850494-50850513 None:intergenic 10.0%
!!! ATTTTAAAAAATGTTTTTGA+GGG + chr8_2:50850493-50850512 None:intergenic 10.0%
!!! TATTTTAAAAAATGTTTTTG+AGG + chr8_2:50850494-50850513 None:intergenic 10.0%
!! CAAAAAAAAAACACATATAT+AGG + chr8_2:50848672-50848691 None:intergenic 15.0%
!!! TTTTTTTTTTGATGAAGAAA+AGG - chr8_2:50848681-50848700 Msa1253400:three_prime_UTR 15.0%
!! ATATATAAATCTGTTCAATA+TGG - chr8_2:50849255-50849274 Msa1253400:CDS 15.0%
!!! TGTATGTTGATTTTTTTATT+TGG - chr8_2:50849577-50849596 Msa1253400:intron 15.0%
!!! ATATATGTTTAGTTTGATTA+TGG - chr8_2:50849618-50849637 Msa1253400:intron 15.0%
!!! GATTTTGAAAATACTTTTAT+GGG - chr8_2:50849759-50849778 Msa1253400:intron 15.0%
!! TAATATCAATAGTTAATAAC+TGG - chr8_2:50850416-50850435 Msa1253400:intron 15.0%
!!! TTTTAAAAAATGTTTTTGAG+GGG + chr8_2:50850492-50850511 None:intergenic 15.0%
!! AGAACTTAAAATATGTAAAA+AGG - chr8_2:50850528-50850547 Msa1253400:intron 15.0%
!!! TTTTAAAAAATGTTTTTGAG+GGG + chr8_2:50850492-50850511 None:intergenic 15.0%
!! AGAACTTAAAATATGTAAAA+AGG - chr8_2:50850528-50850547 Msa1253400:intron 15.0%
!! TGATTATAATGTAAAATAAG+TGG - chr8_2:50851887-50851906 Msa1253400:intron 15.0%
!!! ATATATGTTGTTTTGTAAAT+AGG - chr8_2:50853008-50853027 Msa1253400:intron 15.0%
!! AAAATAAAACAACTTTCAAA+TGG + chr8_2:50853272-50853291 None:intergenic 15.0%
!!! TTTATTTTACAAATGAATTG+AGG - chr8_2:50853284-50853303 Msa1253400:intron 15.0%
!! AAATTATTGAGAAATAATGT+TGG - chr8_2:50853478-50853497 Msa1253400:intron 15.0%
!! TTACATGAATTTAATATCTT+TGG + chr8_2:50854469-50854488 None:intergenic 15.0%
!! AAAGATATTAAATTCATGTA+AGG - chr8_2:50854468-50854487 Msa1253400:intron 15.0%
!! AAAGAAGTAATAATAAAAAG+TGG + chr8_2:50854784-50854803 None:intergenic 15.0%
!!! CATAACAAATTTTAGTAAAA+TGG + chr8_2:50855285-50855304 None:intergenic 15.0%
!! TGGAATATTTATATGAAAAT+TGG - chr8_2:50855318-50855337 Msa1253400:intron 15.0%
!! TATATCTATATATATGTTCA+AGG + chr8_2:50855588-50855607 None:intergenic 15.0%
!! TATATGCTTATAGATTAATT+AGG - chr8_2:50855649-50855668 Msa1253400:intron 15.0%
!! ATATGCTTATAGATTAATTA+GGG - chr8_2:50855650-50855669 Msa1253400:intron 15.0%
!! AAAAAAACACATATATAGGT+AGG + chr8_2:50848668-50848687 None:intergenic 20.0%
!! GAAAAGGAAAAAAAAAAAGA+AGG - chr8_2:50848697-50848716 Msa1253400:three_prime_UTR 20.0%
!! TGTTGAAATTTGATGAATTT+AGG - chr8_2:50848882-50848901 Msa1253400:CDS 20.0%
!! GTTGAAATTTGATGAATTTA+GGG - chr8_2:50848883-50848902 Msa1253400:CDS 20.0%
!!! TATTTTTGTTTTTGCTTTTG+TGG - chr8_2:50849004-50849023 Msa1253400:intron 20.0%
!! TTTGTGAAATTGACTAAAAT+TGG - chr8_2:50849172-50849191 Msa1253400:intron 20.0%
!!! TTATTTGGTGTTTGTTTTAT+AGG - chr8_2:50849592-50849611 Msa1253400:intron 20.0%
!!! GGATTTTGAAAATACTTTTA+TGG - chr8_2:50849758-50849777 Msa1253400:intron 20.0%
!! ATGATTGAATTGTTCTTATT+TGG - chr8_2:50849850-50849869 Msa1253400:CDS 20.0%
!! TATTCTAAATAGATGTTAAC+AGG + chr8_2:50849887-50849906 None:intergenic 20.0%
!!! TATTTAGAATATAGTCTGTT+TGG - chr8_2:50849896-50849915 Msa1253400:CDS 20.0%
!!! TGCTAAAAAATATTGACTTT+TGG - chr8_2:50850084-50850103 Msa1253400:intron 20.0%
!!! TTTAGTACTTGATTTTTATC+TGG - chr8_2:50850130-50850149 Msa1253400:intron 20.0%
!! TACACCTAATATAGTATATA+AGG - chr8_2:50850796-50850815 Msa1253400:intron 20.0%
!! GTTTCCTTATATACTATATT+AGG + chr8_2:50850803-50850822 None:intergenic 20.0%
!! TATAGTATATAAGGAAACTT+TGG - chr8_2:50850805-50850824 Msa1253400:intron 20.0%
!! ATAGTATATAAGGAAACTTT+GGG - chr8_2:50850806-50850825 Msa1253400:intron 20.0%
!! GTAAAAAAATTCTTTGCATT+GGG + chr8_2:50850932-50850951 None:intergenic 20.0%
!! TGTAAAAAAATTCTTTGCAT+TGG + chr8_2:50850933-50850952 None:intergenic 20.0%
!! TGTTGAAGTTGTTTATATAT+AGG - chr8_2:50851122-50851141 Msa1253400:CDS 20.0%
!!! TTGTAGCTTAAATTTTGAAT+TGG - chr8_2:50851348-50851367 Msa1253400:intron 20.0%
!!! TGTAGCTTAAATTTTGAATT+GGG - chr8_2:50851349-50851368 Msa1253400:intron 20.0%
!! AGATTTGATGAAGATAAAAA+TGG - chr8_2:50851400-50851419 Msa1253400:intron 20.0%
!! GATTTGATGAAGATAAAAAT+GGG - chr8_2:50851401-50851420 Msa1253400:intron 20.0%
!!! ATTTTTGAAAAACTAGCAAT+TGG - chr8_2:50851972-50851991 Msa1253400:intron 20.0%
!! CATATATAATATTTGTGTAC+TGG + chr8_2:50852657-50852676 None:intergenic 20.0%
!!! AATGTGCAAATTTTTTGAAA+GGG + chr8_2:50852742-50852761 None:intergenic 20.0%
!!! AAATGTGCAAATTTTTTGAA+AGG + chr8_2:50852743-50852762 None:intergenic 20.0%
!!! TTTAAAAAACATGGCAATTT+TGG + chr8_2:50852835-50852854 None:intergenic 20.0%
!!! ACATACATCTTTAAAAAACA+TGG + chr8_2:50852844-50852863 None:intergenic 20.0%
!!! GTTTTTTAAAGATGTATGTT+TGG - chr8_2:50852845-50852864 Msa1253400:intron 20.0%
!! GTAGGTATTTATTGAATAAA+TGG - chr8_2:50853401-50853420 Msa1253400:intron 20.0%
!! TGTTATAATAATGAGTGAAT+AGG - chr8_2:50853505-50853524 Msa1253400:intron 20.0%
!! ACTATATGAATTTCAGAATT+TGG - chr8_2:50853761-50853780 Msa1253400:intron 20.0%
!! GTATGTAACAAACAAAAATA+TGG + chr8_2:50853818-50853837 None:intergenic 20.0%
!!! ATATAGTTAGTATCACTTTT+AGG - chr8_2:50853899-50853918 Msa1253400:intron 20.0%
!!! AAGCATTTATTTTTATCTGA+TGG - chr8_2:50854399-50854418 Msa1253400:intron 20.0%
!! TATTATATCTCTTTCTCTAT+AGG - chr8_2:50854568-50854587 Msa1253400:intron 20.0%
!! TGTTATGTAATGTTTAATGT+TGG - chr8_2:50855298-50855317 Msa1253400:intron 20.0%
!! TATGCTTATAGATTAATTAG+GGG - chr8_2:50855651-50855670 Msa1253400:intron 20.0%
! TTATGCTTATCTATCTACTT+AGG - chr8_2:50848569-50848588 Msa1253400:three_prime_UTR 25.0%
!! AATTACCTTTTTACCCTTAT+TGG - chr8_2:50848610-50848629 Msa1253400:three_prime_UTR 25.0%
!! ATTACCTTTTTACCCTTATT+GGG - chr8_2:50848611-50848630 Msa1253400:three_prime_UTR 25.0%
!! AATTTGATGAATTTAGGGTT+AGG - chr8_2:50848888-50848907 Msa1253400:CDS 25.0%
!! CTTGATGACTTAAAAATTGA+TGG - chr8_2:50849213-50849232 Msa1253400:intron 25.0%
! TTTAGATAGTAACATATGAG+AGG + chr8_2:50849283-50849302 None:intergenic 25.0%
! AATTGAAGCTAAGAAAGATA+AGG - chr8_2:50849398-50849417 Msa1253400:intron 25.0%
! AGAAAATTACCTTGTAAGTA+TGG + chr8_2:50849459-50849478 None:intergenic 25.0%
!!! TGTTTAGTTTGATTATGGTA+TGG - chr8_2:50849623-50849642 Msa1253400:intron 25.0%
!!! CAAGTTTTGGAAATTTTGTT+TGG - chr8_2:50849688-50849707 Msa1253400:intron 25.0%
!!! AAATTTTGTTTGGTGTTGAA+GGG - chr8_2:50849698-50849717 Msa1253400:intron 25.0%
!! TACTTTTATGGGTTTTCAAT+TGG - chr8_2:50849770-50849789 Msa1253400:intron 25.0%
!! ATTTCATGTTTAACTTTGAG+AGG - chr8_2:50849958-50849977 Msa1253400:intron 25.0%
!!! GAGAGGATTTTGATATAATT+TGG - chr8_2:50849975-50849994 Msa1253400:intron 25.0%
!! TATTTAGAATATAGTCTGTC+TGG - chr8_2:50850301-50850320 Msa1253400:intron 25.0%
! AGTTATTAACTATTGCTCTA+GGG + chr8_2:50850578-50850597 None:intergenic 25.0%
! TAGTATATAAGGAAACTTTG+GGG - chr8_2:50850807-50850826 Msa1253400:intron 25.0%
! TTTATGTATCTTTCCATGAT+TGG + chr8_2:50851088-50851107 None:intergenic 25.0%
!! CTTTATCACTCTTTAAGAAA+AGG - chr8_2:50851213-50851232 Msa1253400:intron 25.0%
!! ACAAATGAAAGAGTACAATA+TGG + chr8_2:50851306-50851325 None:intergenic 25.0%
! AAACTGAAAAAGATTTGAGT+AGG - chr8_2:50851458-50851477 Msa1253400:intron 25.0%
! TATCTGTGATTGTAAATTTG+TGG - chr8_2:50851608-50851627 Msa1253400:intron 25.0%
! TATGTAATATTTAAGCCATG+AGG + chr8_2:50851852-50851871 None:intergenic 25.0%
!! TTTTTGCCTAATCTTTCTAA+TGG - chr8_2:50851932-50851951 Msa1253400:intron 25.0%
! AATTCTCCATTAGAAAGATT+AGG + chr8_2:50851941-50851960 None:intergenic 25.0%
!! ATATTGGGTAAAAGGTTTTA+AGG + chr8_2:50852056-50852075 None:intergenic 25.0%
! TTGAAATTTATTGTGTGATC+TGG - chr8_2:50852157-50852176 Msa1253400:intron 25.0%
!!! CATAAAATGTTTTTTGCTAC+AGG - chr8_2:50852270-50852289 Msa1253400:intron 25.0%
! GTACAGAAATTTGAATTCAT+TGG - chr8_2:50852315-50852334 Msa1253400:intron 25.0%
!! TTTTCTTTTTGTAAGTTGCA+TGG + chr8_2:50852341-50852360 None:intergenic 25.0%
! TTAAAGATGTATGTTTGGAT+TGG - chr8_2:50852850-50852869 Msa1253400:intron 25.0%
! ATAATTGTGTTTGTTCATGA+AGG - chr8_2:50852913-50852932 Msa1253400:intron 25.0%
! TAGGAAACTTCTATTTGATT+AGG - chr8_2:50853027-50853046 Msa1253400:intron 25.0%
! GTTAGAGATGAGAAAATTAA+GGG + chr8_2:50853070-50853089 None:intergenic 25.0%
! AGTTAGAGATGAGAAAATTA+AGG + chr8_2:50853071-50853090 None:intergenic 25.0%
!!! TCTCTAACTTTTGTTTATTG+TGG - chr8_2:50853082-50853101 Msa1253400:intron 25.0%
!! ATTTTACAAATGAATTGAGG+TGG - chr8_2:50853287-50853306 Msa1253400:intron 25.0%
! AGAACACATATAATTGTGTT+TGG - chr8_2:50853352-50853371 Msa1253400:intron 25.0%
! CATGTATATTATCTTGCATA+TGG - chr8_2:50853424-50853443 Msa1253400:intron 25.0%
! AGTTCCTGATGATTATATTT+AGG - chr8_2:50853562-50853581 Msa1253400:intron 25.0%
! CAAACCTAAATATAATCATC+AGG + chr8_2:50853569-50853588 None:intergenic 25.0%
!! TCATTGAAGATATTTTGCAT+TGG + chr8_2:50853695-50853714 None:intergenic 25.0%
!! TATCTTCAATGATTTGTGTA+TGG - chr8_2:50853703-50853722 Msa1253400:intron 25.0%
! AATTCATATAGTTGAAGAAC+TGG + chr8_2:50853753-50853772 None:intergenic 25.0%
! GTAACAAACAAAAATATGGT+GGG + chr8_2:50853814-50853833 None:intergenic 25.0%
! TGTAACAAACAAAAATATGG+TGG + chr8_2:50853815-50853834 None:intergenic 25.0%
!! TTTGTTTGTTACATACTAGA+TGG - chr8_2:50853822-50853841 Msa1253400:intron 25.0%
!! TTTAACTTCTAATGCAAATC+AGG - chr8_2:50853937-50853956 Msa1253400:intron 25.0%
! GCAGACGTAATAAAATTAAT+AGG + chr8_2:50854017-50854036 None:intergenic 25.0%
! GTTATTGAGGGTAATTAAAT+AGG - chr8_2:50854205-50854224 Msa1253400:intron 25.0%
!! TTTGGAATTTCACATACTTT+AGG - chr8_2:50854302-50854321 Msa1253400:intron 25.0%
!! TATGTTGTTTGTTCATGATT+TGG + chr8_2:50854543-50854562 None:intergenic 25.0%
! TGAACTAAAACAAAAGGATA+CGG + chr8_2:50854647-50854666 None:intergenic 25.0%
! TGTATCTGAACTAAAACAAA+AGG + chr8_2:50854653-50854672 None:intergenic 25.0%
! GATAGTAATAGAATATGCAA+AGG + chr8_2:50854680-50854699 None:intergenic 25.0%
!!! TTCAAGTTTTGCTTATGTTT+AGG + chr8_2:50854748-50854767 None:intergenic 25.0%
! AAAGCTTAATGTAAGAATCT+CGG + chr8_2:50855168-50855187 None:intergenic 25.0%
! TATATGAAAATTGGAAATGC+AGG - chr8_2:50855327-50855346 Msa1253400:intron 25.0%
! ATATGAAAATTGGAAATGCA+GGG - chr8_2:50855328-50855347 Msa1253400:intron 25.0%
! ATGCTTATAGATTAATTAGG+GGG - chr8_2:50855652-50855671 Msa1253400:intron 25.0%
! TTACCTTTTTACCCTTATTG+GGG - chr8_2:50848612-50848631 Msa1253400:three_prime_UTR 30.0%
AAAAGAAGGAAAACAGAACA+CGG - chr8_2:50848711-50848730 Msa1253400:three_prime_UTR 30.0%
AAAAAAAACAGAACGAGAGA+AGG - chr8_2:50848751-50848770 Msa1253400:three_prime_UTR 30.0%
AAAAAAACAGAACGAGAGAA+GGG - chr8_2:50848752-50848771 Msa1253400:three_prime_UTR 30.0%
TCAAATTTCAACATGCATGA+GGG + chr8_2:50848875-50848894 None:intergenic 30.0%
ATCAAATTTCAACATGCATG+AGG + chr8_2:50848876-50848895 None:intergenic 30.0%
!! TTTAGGGTTAGGTTTTCATT+TGG - chr8_2:50848899-50848918 Msa1253400:CDS 30.0%
! TTAGGGTTAGGTTTTCATTT+GGG - chr8_2:50848900-50848919 Msa1253400:CDS 30.0%
!!! TTGTTTTTGCTTTTGTGGTT+TGG - chr8_2:50849009-50849028 Msa1253400:intron 30.0%
!!! TTGGTTGTTGATTCTGTTTT+TGG - chr8_2:50849047-50849066 Msa1253400:CDS 30.0%
!!! TTTTGAGATGAAATCACACT+TGG - chr8_2:50849129-50849148 Msa1253400:intron 30.0%
CTTGGTATAAATTGCACATA+AGG - chr8_2:50849147-50849166 Msa1253400:intron 30.0%
!! GTTTTAATCTGTTGCAGAAA+AGG - chr8_2:50849329-50849348 Msa1253400:CDS 30.0%
TACCATTAATACCTCTTCTA+TGG + chr8_2:50849424-50849443 None:intergenic 30.0%
AAATTACCTTGTAAGTATGG+TGG + chr8_2:50849456-50849475 None:intergenic 30.0%
! ACTTACAAGGTAATTTTCTG+AGG - chr8_2:50849460-50849479 Msa1253400:intron 30.0%
! ATGTGTTGTGACATGTTTTT+GGG - chr8_2:50849528-50849547 Msa1253400:intron 30.0%
!!! GTTTTTTGGTATGCAAGTTT+TGG - chr8_2:50849675-50849694 Msa1253400:intron 30.0%
!!! GAAATTTTGTTTGGTGTTGA+AGG - chr8_2:50849697-50849716 Msa1253400:intron 30.0%
! TTGGTTTGATACATTTAGCT+TGG - chr8_2:50849994-50850013 Msa1253400:intron 30.0%
!!! ATTTAGCTTGGTGTTTTTGA+TGG - chr8_2:50850006-50850025 Msa1253400:intron 30.0%
! CACAAGATTCTAGAGAAAAT+AGG - chr8_2:50850042-50850061 Msa1253400:intron 30.0%
ATGTATGATAGCAGTAATGT+TGG - chr8_2:50850231-50850250 Msa1253400:intron 30.0%
!! GGATCTTGAGTTAATTTGTT+GGG - chr8_2:50850352-50850371 Msa1253400:intron 30.0%
!! GATCTTGAGTTAATTTGTTG+GGG - chr8_2:50850353-50850372 Msa1253400:intron 30.0%
!! ATCTTGAGTTAATTTGTTGG+GGG - chr8_2:50850354-50850373 Msa1253400:intron 30.0%
CAGTTATTAACTATTGCTCT+AGG + chr8_2:50850579-50850598 None:intergenic 30.0%
CTAGAGCAATAGTTAATAAC+TGG - chr8_2:50850577-50850596 Msa1253400:intron 30.0%
AGTATATAAGGAAACTTTGG+GGG - chr8_2:50850808-50850827 Msa1253400:intron 30.0%
TAATCTAAACCTGTTTCAGA+TGG + chr8_2:50850907-50850926 None:intergenic 30.0%
!!! TTTTACAGAAAAGAGCATTC+TGG - chr8_2:50850946-50850965 Msa1253400:intron 30.0%
! AACTGAGCATTTAAAATCTC+TGG + chr8_2:50851588-50851607 None:intergenic 30.0%
GTGATTGTAAATTTGTGGTA+AGG - chr8_2:50851613-50851632 Msa1253400:intron 30.0%
! GTTAGGTTTTTCTGTGAAAT+TGG - chr8_2:50851664-50851683 Msa1253400:CDS 30.0%
GGAAATAATTCTCAATGCAA+TGG - chr8_2:50852097-50852116 Msa1253400:intron 30.0%
AATTCTCAATGCAATGGTTA+TGG - chr8_2:50852103-50852122 Msa1253400:intron 30.0%
ATGAATTGTTGAAGCAGAAT+AGG - chr8_2:50852543-50852562 Msa1253400:intron 30.0%
! GAGTGTTTAGATTTGTTTGT+AGG - chr8_2:50852877-50852896 Msa1253400:intron 30.0%
!! AAGCTAAGTTGATGTATCAT+AGG + chr8_2:50852953-50852972 None:intergenic 30.0%
AGTGACTATGACAATGTAAT+TGG - chr8_2:50853127-50853146 Msa1253400:intron 30.0%
TTTCTGCTTACTTTCAGATA+TGG + chr8_2:50853160-50853179 None:intergenic 30.0%
TCTGAATTATGAATCTTGCA+TGG - chr8_2:50853206-50853225 Msa1253400:intron 30.0%
! CAAATGGTGTAAAAGCATAT+TGG + chr8_2:50853256-50853275 None:intergenic 30.0%
! GGAATTTTGAACTTCATTGA+TGG - chr8_2:50853373-50853392 Msa1253400:intron 30.0%
!!! ACAATTTTTTTCCTTACCCA+TGG - chr8_2:50853615-50853634 Msa1253400:intron 30.0%
AATTTCTGTCTCCTTTACTT+TGG - chr8_2:50854158-50854177 Msa1253400:intron 30.0%
! GATTTGGTTTCTAAACCATA+AGG + chr8_2:50854527-50854546 None:intergenic 30.0%
TCATTTAAACTTACAGACAG+TGG + chr8_2:50854714-50854733 None:intergenic 30.0%
!!! TTGTATTTCACTTTTTCCCT+TGG - chr8_2:50854844-50854863 Msa1253400:CDS 30.0%
GAAGAGTTATAGAGAGAATA+TGG - chr8_2:50854909-50854928 Msa1253400:CDS 30.0%
ACATTAAATTCTCCAATACC+AGG + chr8_2:50855039-50855058 None:intergenic 30.0%
TGAACATATATGTATACACG+TGG + chr8_2:50855102-50855121 None:intergenic 30.0%
CGTGTATACATATATGTTCA+TGG - chr8_2:50855102-50855121 Msa1253400:intron 30.0%
TATGAAAATTGGAAATGCAG+GGG - chr8_2:50855329-50855348 Msa1253400:intron 30.0%
CTCCAAATACAAAATTTCCT+CGG - chr8_2:50855443-50855462 Msa1253400:CDS 30.0%
TGAAGAAACTGATGAAAAAG+AGG - chr8_2:50855553-50855572 Msa1253400:CDS 30.0%
GAAGAAACTGATGAAAAAGA+GGG - chr8_2:50855554-50855573 Msa1253400:CDS 30.0%
TTGTCAAATATGAACCAGTA+AGG + chr8_2:50855694-50855713 None:intergenic 30.0%
GGGTAAAAAGGTAATTTCCA+CGG + chr8_2:50848606-50848625 None:intergenic 35.0%
! TACCTTTTTACCCTTATTGG+GGG - chr8_2:50848613-50848632 Msa1253400:three_prime_UTR 35.0%
TACCATAATACCCCCAATAA+GGG + chr8_2:50848626-50848645 None:intergenic 35.0%
TTACCATAATACCCCCAATA+AGG + chr8_2:50848627-50848646 None:intergenic 35.0%
AAAGAAGGAAAACAGAACAC+GGG - chr8_2:50848712-50848731 Msa1253400:three_prime_UTR 35.0%
! GAAGGCAAGCTTCAATTTTA+AGG - chr8_2:50848830-50848849 Msa1253400:exon 35.0%
! TAGGGTTAGGTTTTCATTTG+GGG - chr8_2:50848901-50848920 Msa1253400:CDS 35.0%
!!! TTTTGTGGTTTGGTGATTCT+GGG - chr8_2:50849019-50849038 Msa1253400:intron 35.0%
!!! TTGGTGATTCTGGGTTTTTT+TGG - chr8_2:50849028-50849047 Msa1253400:intron 35.0%
! CATGTGTTGTGACATGTTTT+TGG - chr8_2:50849527-50849546 Msa1253400:intron 35.0%
!!! GACATGTTTTTGGGTATGTT+TGG - chr8_2:50849537-50849556 Msa1253400:intron 35.0%
!!! ATGTTTTTGGGTATGTTTGG+TGG - chr8_2:50849540-50849559 Msa1253400:intron 35.0%
TATTGCTGAAAATGTGTGTC+TGG - chr8_2:50849737-50849756 Msa1253400:intron 35.0%
TGAGTAATTGAAGACTCTTG+TGG - chr8_2:50849822-50849841 Msa1253400:intron 35.0%
!! TGGTCTCATCATTTTTCTTG+AGG - chr8_2:50849916-50849935 Msa1253400:CDS 35.0%
!! GTGTTTTTGATGGTTACAGT+TGG - chr8_2:50850016-50850035 Msa1253400:intron 35.0%
!! TCTGGTCTCATCATTTTTCT+TGG - chr8_2:50850319-50850338 Msa1253400:intron 35.0%
!! ATCATTTTTCTTGGTCTCAG+TGG - chr8_2:50850328-50850347 Msa1253400:intron 35.0%
!! CGGATCTTGAGTTAATTTGT+TGG - chr8_2:50850351-50850370 Msa1253400:intron 35.0%
ATAGTTAATAACTGGCCAAG+TGG - chr8_2:50850424-50850443 Msa1253400:intron 35.0%
TTAAAGGAGATGTGTGATGT+GGG - chr8_2:50850459-50850478 Msa1253400:intron 35.0%
ATAGTTAATAACTGGCCAAG+TGG - chr8_2:50850424-50850443 Msa1253400:intron 35.0%
! TTTGAAATTGAGACCAAGCA+GGG + chr8_2:50850870-50850889 None:intergenic 35.0%
!!! TTTTGAAATTGAGACCAAGC+AGG + chr8_2:50850871-50850890 None:intergenic 35.0%
TAAAAATAAGGAAGACAGGG+AGG + chr8_2:50851026-50851045 None:intergenic 35.0%
GCGTAAAAATAAGGAAGACA+GGG + chr8_2:50851029-50851048 None:intergenic 35.0%
! TGAGCTTTGGCGTAAAAATA+AGG + chr8_2:50851038-50851057 None:intergenic 35.0%
AACTTCATGAGTACCAATCA+TGG - chr8_2:50851072-50851091 Msa1253400:intron 35.0%
TGAATTGGGTGTTCTTATTG+AGG - chr8_2:50851363-50851382 Msa1253400:intron 35.0%
AGATAGTGATCCTATGATAG+AGG - chr8_2:50851519-50851538 Msa1253400:intron 35.0%
TGGATTTCTGACTATGCTAT+TGG - chr8_2:50851547-50851566 Msa1253400:intron 35.0%
GGATTTCTGACTATGCTATT+GGG - chr8_2:50851548-50851567 Msa1253400:intron 35.0%
AGCTGATAATCTGTGTTTCA+AGG - chr8_2:50851738-50851757 Msa1253400:CDS 35.0%
AAGCATATTTATGCACCTCA+TGG - chr8_2:50851834-50851853 Msa1253400:CDS 35.0%
!!! AAGGTTTTAAGGCAAGCAAT+TGG + chr8_2:50852045-50852064 None:intergenic 35.0%
TGGAACTGATATTGGGTAAA+AGG + chr8_2:50852064-50852083 None:intergenic 35.0%
! CAACTTTCAGCTTTTTGTCA+TGG - chr8_2:50852233-50852252 Msa1253400:intron 35.0%
! CAGCAGCATTAAACATCTTT+TGG + chr8_2:50852682-50852701 None:intergenic 35.0%
TTGTGTTTGTTCATGAAGGT+TGG - chr8_2:50852917-50852936 Msa1253400:intron 35.0%
AGACTTACAAATCCTTAGAC+AGG + chr8_2:50853233-50853252 None:intergenic 35.0%
! ACTTCATTGATGGTTGAAGT+AGG - chr8_2:50853383-50853402 Msa1253400:intron 35.0%
GTTATCACCAATCTAACCAT+GGG + chr8_2:50853634-50853653 None:intergenic 35.0%
AGTTATCACCAATCTAACCA+TGG + chr8_2:50853635-50853654 None:intergenic 35.0%
! CTTCAATGATTTGTGTATGG+AGG - chr8_2:50853706-50853725 Msa1253400:intron 35.0%
CATATAGTTGAAGAACTGGT+AGG + chr8_2:50853749-50853768 None:intergenic 35.0%
!! CACTTTTAGGTCATTGCTTT+AGG - chr8_2:50853912-50853931 Msa1253400:intron 35.0%
TGCAAATCAGGACAAACTAA+TGG - chr8_2:50853949-50853968 Msa1253400:intron 35.0%
! GCATAAGCAGCTAATTCTTT+TGG - chr8_2:50854061-50854080 Msa1253400:intron 35.0%
AGAGTAATCAGCCAAAGTAA+AGG + chr8_2:50854172-50854191 None:intergenic 35.0%
CTACAAGTGATGGTTATTGA+GGG - chr8_2:50854193-50854212 Msa1253400:intron 35.0%
CATGTCATACTAATCTGTGT+TGG - chr8_2:50854259-50854278 Msa1253400:intron 35.0%
! AAAGCTTCATGACATGGTTT+TGG - chr8_2:50854284-50854303 Msa1253400:intron 35.0%
! CTTTAGGTTCCTTTGTTATG+TGG - chr8_2:50854318-50854337 Msa1253400:intron 35.0%
GAGTGAAATCCACATAACAA+AGG + chr8_2:50854330-50854349 None:intergenic 35.0%
GTTATGTGGATTTCACTCTT+TGG - chr8_2:50854332-50854351 Msa1253400:intron 35.0%
! TGATTTTCGCAACTTCCTTA+TGG - chr8_2:50854509-50854528 Msa1253400:intron 35.0%
TTCTCTATAGGTCTGCTTTA+CGG - chr8_2:50854580-50854599 Msa1253400:intron 35.0%
GTCGTAACGAATATTTGCAT+AGG + chr8_2:50854625-50854644 None:intergenic 35.0%
CTGCATCAAACACCAATTAA+GGG + chr8_2:50854872-50854891 None:intergenic 35.0%
TCTGCATCAAACACCAATTA+AGG + chr8_2:50854873-50854892 None:intergenic 35.0%
!!! CTTTCTTTTTCAGAATGCCT+AGG - chr8_2:50855003-50855022 Msa1253400:intron 35.0%
TGTATCCTGCATATTGTTTC+AGG - chr8_2:50855130-50855149 Msa1253400:intron 35.0%
GTATCCTGCATATTGTTTCA+GGG - chr8_2:50855131-50855150 Msa1253400:intron 35.0%
GAAATTGTTCCATCATACCT+CGG + chr8_2:50855249-50855268 None:intergenic 35.0%
! CTCCGAGGAAATTTTGTATT+TGG + chr8_2:50855448-50855467 None:intergenic 35.0%
AAGCTTAATAGCAACCTTAC+TGG - chr8_2:50855677-50855696 Msa1253400:intron 35.0%
TACCCCCAATAAGGGTAAAA+AGG + chr8_2:50848618-50848637 None:intergenic 40.0%
!! TACCCTTATTGGGGGTATTA+TGG - chr8_2:50848621-50848640 Msa1253400:three_prime_UTR 40.0%
AATTTCCCTTCTTCCTCCAT+CGG + chr8_2:50848804-50848823 None:intergenic 40.0%
AGAAGGGAAATTGGAGAAGA+AGG - chr8_2:50848812-50848831 Msa1253400:three_prime_UTR 40.0%
ATGCATGAGGGAAAGGAAAA+GGG + chr8_2:50848863-50848882 None:intergenic 40.0%
TTTCAACATGCATGAGGGAA+AGG + chr8_2:50848870-50848889 None:intergenic 40.0%
! AGGGTTAGGTTTTCATTTGG+GGG - chr8_2:50848902-50848921 Msa1253400:CDS 40.0%
! AGGTTTTCATTTGGGGGAAA+AGG - chr8_2:50848908-50848927 Msa1253400:CDS 40.0%
! GGTTTTCATTTGGGGGAAAA+GGG - chr8_2:50848909-50848928 Msa1253400:CDS 40.0%
! TTGGGGGAAAAGGGAATTTT+AGG - chr8_2:50848918-50848937 Msa1253400:intron 40.0%
! TGGGGGAAAAGGGAATTTTA+GGG - chr8_2:50848919-50848938 Msa1253400:intron 40.0%
! CATTCAATCTGAGACATGCA+TGG + chr8_2:50848963-50848982 None:intergenic 40.0%
!!! CTTTTGTGGTTTGGTGATTC+TGG - chr8_2:50849018-50849037 Msa1253400:intron 40.0%
!! AATGAACTTGCTACATGCCA+TGG - chr8_2:50849354-50849373 Msa1253400:CDS 40.0%
TACATGCCATGGTGAAATCA+AGG - chr8_2:50849365-50849384 Msa1253400:CDS 40.0%
TTACGACCTTGATTTCACCA+TGG + chr8_2:50849374-50849393 None:intergenic 40.0%
ATGGTGAAATCAAGGTCGTA+AGG - chr8_2:50849373-50849392 Msa1253400:intron 40.0%
TGGTGAAATCAAGGTCGTAA+GGG - chr8_2:50849374-50849393 Msa1253400:intron 40.0%
GAAAGATAAGGCCATAGAAG+AGG - chr8_2:50849410-50849429 Msa1253400:intron 40.0%
!! GGCCATAGAAGAGGTATTAA+TGG - chr8_2:50849419-50849438 Msa1253400:intron 40.0%
ACTAAGCCACCATACTTACA+AGG - chr8_2:50849447-50849466 Msa1253400:intron 40.0%
! ATTTTTCTTGGTCTCAGTGG+CGG - chr8_2:50850331-50850350 Msa1253400:intron 40.0%
TAATAACTGGCCAAGTGGTA+TGG - chr8_2:50850429-50850448 Msa1253400:intron 40.0%
TAAGGACATTCCATACCACT+TGG + chr8_2:50850442-50850461 None:intergenic 40.0%
GTGGTATGGAATGTCCTTAA+AGG - chr8_2:50850443-50850462 Msa1253400:intron 40.0%
CACATCACACATCTCCTTTA+AGG + chr8_2:50850460-50850479 None:intergenic 40.0%
CTTAAAGGAGATGTGTGATG+TGG - chr8_2:50850458-50850477 Msa1253400:intron 40.0%
TATGTAAAAAGGAGACGCGT+AGG - chr8_2:50850539-50850558 Msa1253400:intron 40.0%
TAATAACTGGCCAAGTGGTA+TGG - chr8_2:50850429-50850448 Msa1253400:intron 40.0%
TAAGGACATTCCATACCACT+TGG + chr8_2:50850442-50850461 None:intergenic 40.0%
GTGGTATGGAATGTCCTTAA+AGG - chr8_2:50850443-50850462 Msa1253400:intron 40.0%
TTAAAGGAGATGCGTGATGT+GGG - chr8_2:50850620-50850639 Msa1253400:intron 40.0%
TATGTAAAAAGGAGACGCGT+AGG - chr8_2:50850539-50850558 Msa1253400:intron 40.0%
TTGAAATTGAGACCAAGCAG+GGG + chr8_2:50850869-50850888 None:intergenic 40.0%
TTTCAGATGGATCGTTCTAG+AGG + chr8_2:50850894-50850913 None:intergenic 40.0%
! TAGAACGATCCATCTGAAAC+AGG - chr8_2:50850895-50850914 Msa1253400:intron 40.0%
GGCGTAAAAATAAGGAAGAC+AGG + chr8_2:50851030-50851049 None:intergenic 40.0%
!! TATGTGCTGCTTATGAGCTT+TGG + chr8_2:50851051-50851070 None:intergenic 40.0%
ATGGCAGACAGATGCATATA+AGG + chr8_2:50851287-50851306 None:intergenic 40.0%
TAGTGATCCTATGATAGAGG+TGG - chr8_2:50851522-50851541 Msa1253400:intron 40.0%
ATCCTATGATAGAGGTGGTT+TGG - chr8_2:50851527-50851546 Msa1253400:intron 40.0%
ATCCAAACCACCTCTATCAT+AGG + chr8_2:50851532-50851551 None:intergenic 40.0%
AGAATGACCTCACGAACAAT+TGG + chr8_2:50851639-50851658 None:intergenic 40.0%
TGAGGTCATTCTCAAAGGTT+AGG - chr8_2:50851647-50851666 Msa1253400:CDS 40.0%
! GACTTCAGTTACTTTCATCC+TGG - chr8_2:50851693-50851712 Msa1253400:CDS 40.0%
TTGCTACACTCACATACCTT+TGG - chr8_2:50851789-50851808 Msa1253400:CDS 40.0%
ATACCTTTGGATCACTTGCA+AGG - chr8_2:50851802-50851821 Msa1253400:CDS 40.0%
TATCCTTGCAAGTGATCCAA+AGG + chr8_2:50851808-50851827 None:intergenic 40.0%
AAGGCAAGCAATTGGTTACA+TGG + chr8_2:50852037-50852056 None:intergenic 40.0%
GCTGTGTTGGAACTGATATT+GGG + chr8_2:50852071-50852090 None:intergenic 40.0%
TGCTGTGTTGGAACTGATAT+TGG + chr8_2:50852072-50852091 None:intergenic 40.0%
TATTTCCCTGATTGCTGTGT+TGG + chr8_2:50852084-50852103 None:intergenic 40.0%
TGAACAAAAGGATGGATCAG+TGG - chr8_2:50852376-50852395 Msa1253400:intron 40.0%
TTGTGCACACAGAACCAAAA+GGG + chr8_2:50852492-50852511 None:intergenic 40.0%
CTGTGTCTGCTAATGACAAT+AGG - chr8_2:50852513-50852532 Msa1253400:intron 40.0%
GGCAAGCAGAGATAAAAACT+TGG + chr8_2:50852721-50852740 None:intergenic 40.0%
GTGAGTCTTCACATACACTA+AGG + chr8_2:50853597-50853616 None:intergenic 40.0%
TTCCTTACCCATGGTTAGAT+TGG - chr8_2:50853624-50853643 Msa1253400:intron 40.0%
! CTAGATGGCATTCACCTTTT+AGG - chr8_2:50853837-50853856 Msa1253400:intron 40.0%
! AACCATGCTGACTACCTAAA+AGG + chr8_2:50853854-50853873 None:intergenic 40.0%
GATTACTCTGCTACAAGTGA+TGG - chr8_2:50854183-50854202 Msa1253400:intron 40.0%
GCTACAAGTGATGGTTATTG+AGG - chr8_2:50854192-50854211 Msa1253400:intron 40.0%
TTGGTGAAAGCTTCATGACA+TGG - chr8_2:50854278-50854297 Msa1253400:intron 40.0%
GAATATTTGCATAGGCAACG+CGG + chr8_2:50854617-50854636 None:intergenic 40.0%
TTTCCCTTGGTTCCCTTAAT+TGG - chr8_2:50854857-50854876 Msa1253400:CDS 40.0%
ACACCAATTAAGGGAACCAA+GGG + chr8_2:50854863-50854882 None:intergenic 40.0%
AACACCAATTAAGGGAACCA+AGG + chr8_2:50854864-50854883 None:intergenic 40.0%
TGAGCTACTGATAGACATTG+AGG - chr8_2:50854948-50854967 Msa1253400:intron 40.0%
CTACTGATAGACATTGAGGT+AGG - chr8_2:50854952-50854971 Msa1253400:intron 40.0%
ATAGACATTGAGGTAGGACT+TGG - chr8_2:50854958-50854977 Msa1253400:intron 40.0%
GATATCTAAGTTCTCCAGCA+GGG + chr8_2:50854984-50855003 None:intergenic 40.0%
AGATATCTAAGTTCTCCAGC+AGG + chr8_2:50854985-50855004 None:intergenic 40.0%
!! TTTTTCAGAATGCCTAGGCT+GGG - chr8_2:50855008-50855027 Msa1253400:intron 40.0%
GCTTTACTCATGATGCTGAA+AGG - chr8_2:50855183-50855202 Msa1253400:intron 40.0%
CGCTTATGGTGACATCATAA+GGG + chr8_2:50855379-50855398 None:intergenic 40.0%
CCTTATGATGTCACCATAAG+CGG - chr8_2:50855377-50855396 Msa1253400:intron 40.0%
! TCTCAATCCTCGAGCTTTTA+AGG + chr8_2:50855473-50855492 None:intergenic 40.0%
CTTCAAATAGTCAGCCATTC+TGG + chr8_2:50855504-50855523 None:intergenic 40.0%
! AATGGCTGACTATTTGAAGC+AGG - chr8_2:50855505-50855524 Msa1253400:CDS 40.0%
! TATTTGAAGCAGGATGGCAA+AGG - chr8_2:50855515-50855534 Msa1253400:CDS 40.0%
CTTAGGAAGATACATGTCCG+TGG - chr8_2:50848586-50848605 Msa1253400:three_prime_UTR 45.0%
AAAACAGAACGAGAGAAGGG+AGG - chr8_2:50848755-50848774 Msa1253400:three_prime_UTR 45.0%
AAACAGAACGAGAGAAGGGA+GGG - chr8_2:50848756-50848775 Msa1253400:three_prime_UTR 45.0%
GAAGAAGGAAAAGAAGCCGA+TGG - chr8_2:50848785-50848804 Msa1253400:three_prime_UTR 45.0%
GATGGAGGAAGAAGGGAAAT+TGG - chr8_2:50848803-50848822 Msa1253400:three_prime_UTR 45.0%
CATGCATGAGGGAAAGGAAA+AGG + chr8_2:50848864-50848883 None:intergenic 45.0%
CACATCACGCATCTCCTTTA+AGG + chr8_2:50850621-50850640 None:intergenic 45.0%
CTTAAAGGAGATGCGTGATG+TGG - chr8_2:50850619-50850638 Msa1253400:intron 45.0%
TCAGTTGCTGCAGTGGTATA+GGG + chr8_2:50850760-50850779 None:intergenic 45.0%
TTCAGTTGCTGCAGTGGTAT+AGG + chr8_2:50850761-50850780 None:intergenic 45.0%
GAAGACAGGGAGGAATATCA+AGG + chr8_2:50851016-50851035 None:intergenic 45.0%
GTTCGTGAGGTCATTCTCAA+AGG - chr8_2:50851642-50851661 Msa1253400:CDS 45.0%
! TCAGTTACTTTCATCCTGGC+AGG - chr8_2:50851697-50851716 Msa1253400:CDS 45.0%
! CAGTTACTTTCATCCTGGCA+GGG - chr8_2:50851698-50851717 Msa1253400:CDS 45.0%
! GCAGGGAGAACAAGCTTTAT+TGG - chr8_2:50851715-50851734 Msa1253400:CDS 45.0%
TCAGTTCCAACACAGCAATC+AGG - chr8_2:50852075-50852094 Msa1253400:intron 45.0%
CAGTTCCAACACAGCAATCA+GGG - chr8_2:50852076-50852095 Msa1253400:intron 45.0%
CTCTTGCAATCGCTTCTAGA+TGG + chr8_2:50852129-50852148 None:intergenic 45.0%
CAGGTTCTACATGTTGCATC+TGG - chr8_2:50852289-50852308 Msa1253400:intron 45.0%
TTGCGTGCTGAACAAAAGGA+TGG - chr8_2:50852368-50852387 Msa1253400:intron 45.0%
ACAAAAGGATGGATCAGTGG+TGG - chr8_2:50852379-50852398 Msa1253400:intron 45.0%
!! ACACAGGTTGGTGAACTTGA+TGG - chr8_2:50852410-50852429 Msa1253400:intron 45.0%
!! AGGTTGGTGAACTTGATGGA+GGG - chr8_2:50852414-50852433 Msa1253400:intron 45.0%
AAGGCACGTTCGAAGAAACA+AGG - chr8_2:50852437-50852456 Msa1253400:intron 45.0%
AGGCACGTTCGAAGAAACAA+GGG - chr8_2:50852438-50852457 Msa1253400:intron 45.0%
GAAGAAACAAGGGAGGAAGA+GGG - chr8_2:50852448-50852467 Msa1253400:intron 45.0%
AGAGGGATGTTGTGGATTTG+AGG - chr8_2:50852465-50852484 Msa1253400:intron 45.0%
! TGTGGATTTGAGGACCCTTT+TGG - chr8_2:50852475-50852494 Msa1253400:intron 45.0%
CTTGTGCACACAGAACCAAA+AGG + chr8_2:50852493-50852512 None:intergenic 45.0%
!! AGGAAGCATTCTTGTCCTTC+AGG - chr8_2:50852563-50852582 Msa1253400:intron 45.0%
AGGTGATGCATCACAGAGAA+TGG - chr8_2:50852583-50852602 Msa1253400:intron 45.0%
ATCTTGCATGGTCCTGTCTA+AGG - chr8_2:50853218-50853237 Msa1253400:intron 45.0%
!! AGGTGGTTTTTGCCACTTGA+AGG - chr8_2:50853304-50853323 Msa1253400:intron 45.0%
!! TGGTTTTTGCCACTTGAAGG+TGG - chr8_2:50853307-50853326 Msa1253400:intron 45.0%
CACCAATCTAACCATGGGTA+AGG + chr8_2:50853629-50853648 None:intergenic 45.0%
!! CACCTTTTAGGTAGTCAGCA+TGG - chr8_2:50853849-50853868 Msa1253400:intron 45.0%
AAACAGCATCTCGTCTTTCG+CGG - chr8_2:50854358-50854377 Msa1253400:intron 45.0%
TCGCGGTTTCTTGGTAAAAC+AGG - chr8_2:50854375-50854394 Msa1253400:intron 45.0%
CGCGGTTTCTTGGTAAAACA+GGG - chr8_2:50854376-50854395 Msa1253400:intron 45.0%
!!! CTTTTTCAGAATGCCTAGGC+TGG - chr8_2:50855007-50855026 Msa1253400:intron 45.0%
AGCACCCTGAAACAATATGC+AGG + chr8_2:50855138-50855157 None:intergenic 45.0%
! CAGTCTTATAAGCGTGTACG+TGG - chr8_2:50855215-50855234 Msa1253400:intron 45.0%
AAATTGGAAATGCAGGGGAC+AGG - chr8_2:50855334-50855353 Msa1253400:intron 45.0%
TATGGTGACATCATAAGGGC+TGG + chr8_2:50855375-50855394 None:intergenic 45.0%
CCGCTTATGGTGACATCATA+AGG + chr8_2:50855380-50855399 None:intergenic 45.0%
ATATCTGGCCTCACTAATCC+TGG + chr8_2:50855408-50855427 None:intergenic 45.0%
GCCAGATATCATGCATGAGA+GGG - chr8_2:50855419-50855438 Msa1253400:intron 45.0%
TCCCTCTCATGCATGATATC+TGG + chr8_2:50855423-50855442 None:intergenic 45.0%
TTGAGATTCCAGAGCCAGAA+TGG - chr8_2:50855487-50855506 Msa1253400:CDS 45.0%
! GCTGACTATTTGAAGCAGGA+TGG - chr8_2:50855509-50855528 Msa1253400:CDS 45.0%
!! TTTATGAAATATATATTAAA+TGG - chr8_2:50850386-50850405 Msa1253400:intron 5.0%
!! TAAAAAAAAATATTGAAATA+TGG + chr8_2:50852976-50852995 None:intergenic 5.0%
!!! TCAATATTTTTTTTTATTTA+TGG - chr8_2:50852980-50852999 Msa1253400:intron 5.0%
TACGAGCTAGTATCCTGACC+TGG + chr8_2:50848545-50848564 None:intergenic 50.0%
GAAGGAAAAGAAGCCGATGG+AGG - chr8_2:50848788-50848807 Msa1253400:three_prime_UTR 50.0%
AAGAAGCCGATGGAGGAAGA+AGG - chr8_2:50848795-50848814 Msa1253400:three_prime_UTR 50.0%
AGAAGCCGATGGAGGAAGAA+GGG - chr8_2:50848796-50848815 Msa1253400:three_prime_UTR 50.0%
!! TAACTATTGCTCTAGGGCGC+CGG + chr8_2:50850572-50850591 None:intergenic 50.0%
CAGTTGCTGCAGTGGTATAG+GGG + chr8_2:50850759-50850778 None:intergenic 50.0%
CCAGAATTCAGTTGCTGCAG+TGG + chr8_2:50850767-50850786 None:intergenic 50.0%
CCACTGCAGCAACTGAATTC+TGG - chr8_2:50850764-50850783 Msa1253400:intron 50.0%
AAGCAGGGGTGGATCTCTTT+GGG + chr8_2:50850855-50850874 None:intergenic 50.0%
AAATTGAGACCAAGCAGGGG+TGG + chr8_2:50850866-50850885 None:intergenic 50.0%
GGTAAGGCCAATTGTTCGTG+AGG - chr8_2:50851629-50851648 Msa1253400:intron 50.0%
! TAAAGCTTGTTCTCCCTGCC+AGG + chr8_2:50851714-50851733 None:intergenic 50.0%
GTCGTTGCGTGCTGAACAAA+AGG - chr8_2:50852364-50852383 Msa1253400:intron 50.0%
! AGTGGTGGAGAGTAGAACAC+AGG - chr8_2:50852394-50852413 Msa1253400:intron 50.0%
GTGGAGAGTAGAACACAGGT+TGG - chr8_2:50852398-50852417 Msa1253400:intron 50.0%
!! CAGGTTGGTGAACTTGATGG+AGG - chr8_2:50852413-50852432 Msa1253400:intron 50.0%
TGGTGAACTTGATGGAGGGA+AGG - chr8_2:50852418-50852437 Msa1253400:intron 50.0%
CACGTTCGAAGAAACAAGGG+AGG - chr8_2:50852441-50852460 Msa1253400:intron 50.0%
CGAAGAAACAAGGGAGGAAG+AGG - chr8_2:50852447-50852466 Msa1253400:intron 50.0%
CTCTGTGATGCATCACCTGA+AGG + chr8_2:50852581-50852600 None:intergenic 50.0%
TCCTTGAGACCACCTTCAAG+TGG + chr8_2:50853319-50853338 None:intergenic 50.0%
TGAAGGTGGTCTCAAGGACA+AGG - chr8_2:50853321-50853340 Msa1253400:intron 50.0%
GCTTATGCCCTCTACAACCA+AGG + chr8_2:50854049-50854068 None:intergenic 50.0%
TCTCGTCTTTCGCGGTTTCT+TGG - chr8_2:50854366-50854385 Msa1253400:intron 50.0%
ACCTCCTCTTCTTCTCCAGA+TGG - chr8_2:50854434-50854453 Msa1253400:intron 50.0%
ACCATCTGGAGAAGAAGAGG+AGG + chr8_2:50854438-50854457 None:intergenic 50.0%
CGAACCATCTGGAGAAGAAG+AGG + chr8_2:50854441-50854460 None:intergenic 50.0%
!! CTTTGGAGTCACGAACCATC+TGG + chr8_2:50854452-50854471 None:intergenic 50.0%
ATAGGCAACGCGGAGTTTGA+AGG + chr8_2:50854607-50854626 None:intergenic 50.0%
TACCAGGAAATACCCAGCCT+AGG + chr8_2:50855023-50855042 None:intergenic 50.0%
GGCTGGGTATTTCCTGGTAT+TGG - chr8_2:50855024-50855043 Msa1253400:intron 50.0%
CTTATAAGCGTGTACGTGGC+AGG - chr8_2:50855219-50855238 Msa1253400:intron 50.0%
AATCCTGGACTCACCGCTTA+TGG + chr8_2:50855393-50855412 None:intergenic 50.0%
GGCCAGATATCATGCATGAG+AGG - chr8_2:50855418-50855437 Msa1253400:intron 50.0%
!! CGAGCTTTTAAGGATCTCCG+AGG + chr8_2:50855463-50855482 None:intergenic 50.0%
CGGAGATCCTTAAAAGCTCG+AGG - chr8_2:50855463-50855482 Msa1253400:CDS 50.0%
!! ATAGTCAGCCATTCTGGCTC+TGG + chr8_2:50855498-50855517 None:intergenic 50.0%
AAGGGAGGGAGAGGAGAAGA+AGG - chr8_2:50848770-50848789 Msa1253400:three_prime_UTR 55.0%
!! GAGACGCGTAGGTGTTGAAC+CGG - chr8_2:50850550-50850569 Msa1253400:intron 55.0%
!! CGTGAATTGCTCTAGGGCGT+CGG + chr8_2:50850733-50850752 None:intergenic 55.0%
CGACGCCCTAGAGCAATTCA+CGG - chr8_2:50850731-50850750 Msa1253400:intron 55.0%
! GGGTGCCGTGAATTGCTCTA+GGG + chr8_2:50850739-50850758 None:intergenic 55.0%
! GGAAACTTTGGGGGATGCCA+TGG - chr8_2:50850817-50850836 Msa1253400:intron 55.0%
AGCAGGGGTGGATCTCTTTG+GGG + chr8_2:50850854-50850873 None:intergenic 55.0%
CAAGCAGGGGTGGATCTCTT+TGG + chr8_2:50850856-50850875 None:intergenic 55.0%
CAAAGAGATCCACCCCTGCT+TGG - chr8_2:50850854-50850873 Msa1253400:intron 55.0%
AGGGAGGAAGAGGGATGTTG+TGG - chr8_2:50852457-50852476 Msa1253400:intron 55.0%
GAATGCGATTGAAGCGCGCA+TGG - chr8_2:50852619-50852638 Msa1253400:intron 55.0%
GCCACTTGAAGGTGGTCTCA+AGG - chr8_2:50853315-50853334 Msa1253400:intron 55.0%
CTACCAGCCAACAAGCTTGC+AGG - chr8_2:50853984-50854003 Msa1253400:intron 55.0%
!! AGTCCTGCAAGCTTGTTGGC+TGG + chr8_2:50853990-50854009 None:intergenic 55.0%
AGCCAACAAGCTTGCAGGAC+TGG - chr8_2:50853989-50854008 Msa1253400:intron 55.0%
CTCCAGTCCTGCAAGCTTGT+TGG + chr8_2:50853994-50854013 None:intergenic 55.0%
TGCCCTCTACAACCAAGGTG+CGG + chr8_2:50854044-50854063 None:intergenic 55.0%
TGCCTAGGCTGGGTATTTCC+TGG - chr8_2:50855018-50855037 Msa1253400:intron 55.0%
! GCAGGTTGACCGAGGTATGA+TGG - chr8_2:50855237-50855256 Msa1253400:intron 55.0%
! ATAAGGGCTGGTGCACCTAC+TGG + chr8_2:50855363-50855382 None:intergenic 55.0%
TCACCATAAGCGGTGAGTCC+AGG - chr8_2:50855387-50855406 Msa1253400:intron 55.0%
! CGGTGAGTCCAGGATTAGTG+AGG - chr8_2:50855397-50855416 Msa1253400:intron 55.0%
GAACGAGAGAAGGGAGGGAG+AGG - chr8_2:50848761-50848780 Msa1253400:three_prime_UTR 60.0%
!! GGGGTGCCGTGAATTGCTCT+AGG + chr8_2:50850740-50850759 None:intergenic 60.0%
GCAGGGGTGGATCTCTTTGG+GGG + chr8_2:50850853-50850872 None:intergenic 60.0%
GCGATTGAAGCGCGCATGGT+TGG - chr8_2:50852623-50852642 Msa1253400:intron 60.0%
ACGCCGCACCTTGGTTGTAG+AGG - chr8_2:50854038-50854057 Msa1253400:intron 60.0%
CGCCGCACCTTGGTTGTAGA+GGG - chr8_2:50854039-50854058 Msa1253400:intron 60.0%
! TGTACGTGGCAGGTTGACCG+AGG - chr8_2:50855229-50855248 Msa1253400:intron 60.0%
! GGATCTCTTTGGGGGCAGGC+AGG + chr8_2:50850845-50850864 None:intergenic 65.0%
! GGGTGGATCTCTTTGGGGGC+AGG + chr8_2:50850849-50850868 None:intergenic 65.0%
! GAAGCGCGCATGGTTGGTGC+TGG - chr8_2:50852629-50852648 Msa1253400:intron 65.0%
ACGTCTGCAACGCCGCACCT+TGG - chr8_2:50854029-50854048 Msa1253400:intron 65.0%
GAGGTAGGACTTGGCCCTGC+TGG - chr8_2:50854967-50854986 Msa1253400:intron 65.0%
GCAGGGGACAGGCTTCCAGT+AGG - chr8_2:50855345-50855364 Msa1253400:intron 65.0%
TTGGGGGCAGGCAGGTGCCA+TGG + chr8_2:50850837-50850856 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 50848538 50855742 50848538 ID=Msa1253400;Name=Msa1253400
chr8_2 mRNA 50848538 50855742 50848538 ID=Msa1253400-mRNA-1;Parent=Msa1253400;Name=Msa1253400-mRNA-1;_AED=0.32;_eAED=0.32;_QI=0|0.25|0.22|0.77|0.75|0.88|9|306|351
chr8_2 exon 50848538 50848931 50848538 ID=Msa1253400-mRNA-1:exon:15551;Parent=Msa1253400-mRNA-1
chr8_2 exon 50849040 50849128 50849040 ID=Msa1253400-mRNA-1:exon:15550;Parent=Msa1253400-mRNA-1
chr8_2 exon 50849224 50849388 50849224 ID=Msa1253400-mRNA-1:exon:15549;Parent=Msa1253400-mRNA-1
chr8_2 exon 50849825 50849956 50849825 ID=Msa1253400-mRNA-1:exon:15548;Parent=Msa1253400-mRNA-1
chr8_2 exon 50851112 50851168 50851112 ID=Msa1253400-mRNA-1:exon:15547;Parent=Msa1253400-mRNA-1
chr8_2 exon 50851640 50851884 50851640 ID=Msa1253400-mRNA-1:exon:15546;Parent=Msa1253400-mRNA-1
chr8_2 exon 50854812 50854929 50854812 ID=Msa1253400-mRNA-1:exon:15545;Parent=Msa1253400-mRNA-1
chr8_2 exon 50855429 50855582 50855429 ID=Msa1253400-mRNA-1:exon:15544;Parent=Msa1253400-mRNA-1
chr8_2 exon 50855735 50855742 50855735 ID=Msa1253400-mRNA-1:exon:15543;Parent=Msa1253400-mRNA-1
chr8_2 CDS 50855735 50855742 50855735 ID=Msa1253400-mRNA-1:cds;Parent=Msa1253400-mRNA-1
chr8_2 CDS 50855429 50855582 50855429 ID=Msa1253400-mRNA-1:cds;Parent=Msa1253400-mRNA-1
chr8_2 CDS 50854812 50854929 50854812 ID=Msa1253400-mRNA-1:cds;Parent=Msa1253400-mRNA-1
chr8_2 CDS 50851640 50851884 50851640 ID=Msa1253400-mRNA-1:cds;Parent=Msa1253400-mRNA-1
chr8_2 CDS 50851112 50851168 50851112 ID=Msa1253400-mRNA-1:cds;Parent=Msa1253400-mRNA-1
chr8_2 CDS 50849825 50849956 50849825 ID=Msa1253400-mRNA-1:cds;Parent=Msa1253400-mRNA-1
chr8_2 CDS 50849224 50849388 50849224 ID=Msa1253400-mRNA-1:cds;Parent=Msa1253400-mRNA-1
chr8_2 CDS 50849040 50849128 50849040 ID=Msa1253400-mRNA-1:cds;Parent=Msa1253400-mRNA-1
chr8_2 CDS 50848844 50848931 50848844 ID=Msa1253400-mRNA-1:cds;Parent=Msa1253400-mRNA-1
chr8_2 three_prime_UTR 50848538 50848843 50848538 ID=Msa1253400-mRNA-1:three_prime_utr;Parent=Msa1253400-mRNA-1
Gene Sequence

>Msa1253400

ATGACCAGAAAAGGAAAAAAAAAAAGAAGGAAAACAGAACACGGGACAGAGAAGAAAAAAGAAAAAAAACAGAACGAGAGAAGGGAGGGAGAGGAGAAGAAGGAAAAGAAGCCGATGGAGGAAGAAGGGAAATTGGAGAAGAAGGCAAGCTTCAATTTTAAGGTTAATGAACTTGCTACATGCCATGGTGAAATCAAGGTCGTAAGGGCAATTGAAGCTAAGAAAGATAAGGCCATAGAAGAGGTATTAATGGTAATTACTAAGCCACCATACTTACAAGTGGTGGAGAGTAGAACACAGGTTGGTGAACTTGATGGAGGGAAGGCACGTTCGAAGAAACAAGGGAGGAAGAGGGATGTTGTGGATTTGAGGACCCTTTTGGTTCTGTGTGCACAAGCTGTGTCTGCTAATGACAATAGGACTGCTAATGAATTGTTGAAGCAGAATAGGAAGCATTCTTGTCCTTCAGGTGATGCATCACAGAGAATGGCTCATTACTTTGCGAATGCGATTGAAGCGCGCATGATTCAAGTCAACAGAAGTGACTATGACAATGTAATTGGAGCTTTGCCATATCTGAAAGTTCCTTTGTTATGTGGATTTCACTCTTTGGAGAAAACAGCATCTCGTCTTTCGCGGTTTCTTGGTAAAACAGGGAAGCATTTATTTTTATCTGATGGTAAGAATGAAAAACCTCCTCTTCTTCTCCAGATGATGTATAGCGACTATATGAAGAGTTATAGAGAGAATATGGCAAATTTCTTAGAATCTGAGCTACTGATAGACATTGAGGTAGGACTTGGCCCTGCTGGAGAACTTAGATATCTTTCTTTTTCAGAATGCCTAGGCTGGGTATTTCCTGGTATTGGAGAATTTAATGGTGCTCATGATGCCGAGATTCTTACATTAAGCTTTACTCATGATGCTGAAAGGTGTAGTTATCAGTCTTATAAGCGTGTACGTGGCAGGGGACAGGCTTCCAGTAGGTGCACCAGCCCTTATGATGTCACCATAAGCGGTGAGTCCAGGATTAGTGAGGCCAGATATCATGCATGA
Protein sequence

>Msa1253400

MTRKGKKKRRKTEHGTEKKKEKKQNERREGEEKKEKKPMEEEGKLEKKASFNFKVNELATCHGEIKVVRAIEAKKDKAIEEVLMVITKPPYLQVVESRTQVGELDGGKARSKKQGRKRDVVDLRTLLVLCAQAVSANDNRTANELLKQNRKHSCPSGDASQRMAHYFANAIEARMIQVNRSDYDNVIGALPYLKVPLLCGFHSLEKTASRLSRFLGKTGKHLFLSDGKNEKPPLLLQMMYSDYMKSYRENMANFLESELLIDIEVGLGPAGELRYLSFSECLGWVFPGIGEFNGAHDAEILTLSFTHDAERCSYQSYKRVRGRGQASSRCTSPYDVTISGESRISEARYHA*