Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0820530 | XP_003617080.1 | 99.554 | 224 | 0 | 1 | 1 | 224 | 1 | 223 | 4.10e-154 | 436 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0820530 | G7K2X4 | 99.554 | 224 | 0 | 1 | 1 | 224 | 1 | 223 | 1.96e-154 | 436 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0820530 | 0.839589 | 1.447418e-57 | -8.615850e-47 |
| Msa0006880 | Msa0820530 | -0.808631 | 2.816145e-50 | -8.615850e-47 |
| Msa0024480 | Msa0820530 | -0.816709 | 4.808157e-52 | -8.615850e-47 |
| Msa0036370 | Msa0820530 | -0.862867 | 3.739472e-64 | -8.615850e-47 |
| Msa0047250 | Msa0820530 | -0.812178 | 4.830392e-51 | -8.615850e-47 |
| Msa0052860 | Msa0820530 | -0.808460 | 3.063991e-50 | -8.615850e-47 |
| Msa0055150 | Msa0820530 | -0.811962 | 5.385293e-51 | -8.615850e-47 |
| Msa0065650 | Msa0820530 | -0.800506 | 1.395670e-48 | -8.615850e-47 |
| Msa0072170 | Msa0820530 | -0.823689 | 1.210160e-53 | -8.615850e-47 |
| Msa0084430 | Msa0820530 | -0.828703 | 7.759954e-55 | -8.615850e-47 |
| Msa0090030 | Msa0820530 | -0.863586 | 2.240195e-64 | -8.615850e-47 |
| Msa0091500 | Msa0820530 | -0.810485 | 1.126182e-50 | -8.615850e-47 |
| Msa0092170 | Msa0820530 | -0.847861 | 8.846037e-60 | -8.615850e-47 |
| Msa0099510 | Msa0820530 | -0.823474 | 1.358786e-53 | -8.615850e-47 |
| Msa0108870 | Msa0820530 | -0.802845 | 4.624761e-49 | -8.615850e-47 |
| Msa0115460 | Msa0820530 | -0.821217 | 4.539931e-53 | -8.615850e-47 |
| Msa0120340 | Msa0820530 | -0.802067 | 6.687709e-49 | -8.615850e-47 |
| Msa0120540 | Msa0820530 | -0.815201 | 1.043626e-51 | -8.615850e-47 |
| Msa0607290 | Msa0820530 | 0.801273 | 9.733324e-49 | -8.615850e-47 |
| Msa0608910 | Msa0820530 | -0.808322 | 3.278651e-50 | -8.615850e-47 |
| Msa0609970 | Msa0820530 | -0.822973 | 1.778165e-53 | -8.615850e-47 |
| Msa0614990 | Msa0820530 | -0.815154 | 1.069272e-51 | -8.615850e-47 |
| Msa0617260 | Msa0820530 | -0.842955 | 1.885146e-58 | -8.615850e-47 |
| Msa0618200 | Msa0820530 | 0.844147 | 9.049657e-59 | -8.615850e-47 |
| Msa0620330 | Msa0820530 | -0.817792 | 2.744214e-52 | -8.615850e-47 |
| Msa0625840 | Msa0820530 | 0.843431 | 1.407572e-58 | -8.615850e-47 |
| Msa0626220 | Msa0820530 | -0.803892 | 2.806413e-49 | -8.615850e-47 |
| Msa0628290 | Msa0820530 | -0.828536 | 8.513805e-55 | -8.615850e-47 |
| Msa0630950 | Msa0820530 | -0.834493 | 2.902844e-56 | -8.615850e-47 |
| Msa0646130 | Msa0820530 | -0.809940 | 1.475617e-50 | -8.615850e-47 |
| Msa0652300 | Msa0820530 | -0.804992 | 1.655118e-49 | -8.615850e-47 |
| Msa0653320 | Msa0820530 | 0.828953 | 6.748537e-55 | -8.615850e-47 |
| Msa0657460 | Msa0820530 | 0.833004 | 6.841807e-56 | -8.615850e-47 |
| Msa0669190 | Msa0820530 | -0.807236 | 5.579486e-50 | -8.615850e-47 |
| Msa0673470 | Msa0820530 | -0.813298 | 2.747538e-51 | -8.615850e-47 |
| Msa0679550 | Msa0820530 | -0.833050 | 6.662613e-56 | -8.615850e-47 |
| Msa0687230 | Msa0820530 | -0.829713 | 4.413962e-55 | -8.615850e-47 |
| Msa0693790 | Msa0820530 | -0.818614 | 1.787809e-52 | -8.615850e-47 |
| Msa0696420 | Msa0820530 | -0.806927 | 6.486614e-50 | -8.615850e-47 |
| Msa0705600 | Msa0820530 | -0.802125 | 6.506734e-49 | -8.615850e-47 |
| Msa0706390 | Msa0820530 | -0.818078 | 2.365008e-52 | -8.615850e-47 |
| Msa0707390 | Msa0820530 | -0.827947 | 1.180666e-54 | -8.615850e-47 |
| Msa0715140 | Msa0820530 | -0.800898 | 1.161377e-48 | -8.615850e-47 |
| Msa0715150 | Msa0820530 | -0.819326 | 1.231863e-52 | -8.615850e-47 |
| Msa0726080 | Msa0820530 | -0.807340 | 5.303352e-50 | -8.615850e-47 |
| Msa0736570 | Msa0820530 | -0.808898 | 2.470392e-50 | -8.615850e-47 |
| Msa0744090 | Msa0820530 | -0.803055 | 4.184302e-49 | -8.615850e-47 |
| Msa0774750 | Msa0820530 | -0.811783 | 5.890908e-51 | -8.615850e-47 |
| Msa0788110 | Msa0820530 | -0.819623 | 1.053787e-52 | -8.615850e-47 |
| Msa0790390 | Msa0820530 | 0.822472 | 2.326120e-53 | -8.615850e-47 |
| Msa0791820 | Msa0820530 | -0.805324 | 1.410036e-49 | -8.615850e-47 |
| Msa0792090 | Msa0820530 | -0.807681 | 4.488726e-50 | -8.615850e-47 |
| Msa0794320 | Msa0820530 | -0.808842 | 2.538754e-50 | -8.615850e-47 |
| Msa0795660 | Msa0820530 | -0.811996 | 5.293699e-51 | -8.615850e-47 |
| Msa0812060 | Msa0820530 | -0.817343 | 3.463202e-52 | -8.615850e-47 |
| Msa0812290 | Msa0820530 | -0.800918 | 1.150354e-48 | -8.615850e-47 |
| Msa0814250 | Msa0820530 | -0.812160 | 4.875580e-51 | -8.615850e-47 |
| Msa0817260 | Msa0820530 | -0.811595 | 6.471002e-51 | -8.615850e-47 |
| Msa0820530 | Msa0825280 | -0.803267 | 3.783061e-49 | -8.615850e-47 |
| Msa0820530 | Msa0830210 | -0.803211 | 3.884316e-49 | -8.615850e-47 |
| Msa0820530 | Msa0846230 | -0.804564 | 2.033582e-49 | -8.615850e-47 |
| Msa0820530 | Msa0850710 | -0.812215 | 4.743133e-51 | -8.615850e-47 |
| Msa0820530 | Msa0851470 | -0.800738 | 1.252145e-48 | -8.615850e-47 |
| Msa0820530 | Msa0876860 | 0.822269 | 2.592504e-53 | -8.615850e-47 |
| Msa0820530 | Msa0879860 | -0.845249 | 4.568025e-59 | -8.615850e-47 |
| Msa0820530 | Msa0881580 | -0.811135 | 8.143223e-51 | -8.615850e-47 |
| Msa0820530 | Msa0891600 | 0.813807 | 2.123171e-51 | -8.615850e-47 |
| Msa0820530 | Msa0899350 | -0.809869 | 1.528834e-50 | -8.615850e-47 |
| Msa0820530 | Msa0908170 | -0.809200 | 2.128231e-50 | -8.615850e-47 |
| Msa0820530 | Msa0924150 | 0.854302 | 1.347265e-61 | -8.615850e-47 |
| Msa0820530 | Msa0930140 | -0.801785 | 7.641649e-49 | -8.615850e-47 |
| Msa0820530 | Msa0930820 | -0.808979 | 2.372725e-50 | -8.615850e-47 |
| Msa0820530 | Msa0937330 | -0.804679 | 1.923813e-49 | -8.615850e-47 |
| Msa0820530 | Msa0945100 | -0.802544 | 5.333624e-49 | -8.615850e-47 |
| Msa0820530 | Msa0947800 | -0.801052 | 1.079807e-48 | -8.615850e-47 |
| Msa0820530 | Msa0957450 | 0.825056 | 5.770091e-54 | -8.615850e-47 |
| Msa0820530 | Msa0959010 | -0.822477 | 2.319859e-53 | -8.615850e-47 |
| Msa0820530 | Msa0963090 | 0.801525 | 8.643033e-49 | -8.615850e-47 |
| Msa0820530 | Msa1025260 | -0.806784 | 6.951889e-50 | -8.615850e-47 |
| Msa0820530 | Msa1025940 | -0.808569 | 2.903508e-50 | -8.615850e-47 |
| Msa0820530 | Msa1029080 | 0.820192 | 7.808622e-53 | -8.615850e-47 |
| Msa0820530 | Msa1036740 | -0.816121 | 6.512012e-52 | -8.615850e-47 |
| Msa0820530 | Msa1048750 | 0.814843 | 1.252920e-51 | -8.615850e-47 |
| Msa0820530 | Msa1063700 | -0.811615 | 6.407894e-51 | -8.615850e-47 |
| Msa0820530 | Msa1087510 | 0.828701 | 7.765397e-55 | -8.615850e-47 |
| Msa0820530 | Msa1089740 | 0.805228 | 1.477564e-49 | -8.615850e-47 |
| Msa0820530 | Msa1096550 | -0.817074 | 3.981931e-52 | -8.615850e-47 |
| Msa0820530 | Msa1100520 | 0.816298 | 5.943194e-52 | -8.615850e-47 |
| Msa0820530 | Msa1109350 | -0.806285 | 8.857994e-50 | -8.615850e-47 |
| Msa0820530 | Msa1111700 | -0.802470 | 5.525723e-49 | -8.615850e-47 |
| Msa0820530 | Msa1113590 | -0.841847 | 3.705845e-58 | -8.615850e-47 |
| Msa0820530 | Msa1122780 | -0.814163 | 1.771661e-51 | -8.615850e-47 |
| Msa0820530 | Msa1126120 | 0.821948 | 3.077346e-53 | -8.615850e-47 |
| Msa0820530 | Msa1144970 | -0.802259 | 6.107199e-49 | -8.615850e-47 |
| Msa0820530 | Msa1156170 | 0.814801 | 1.280604e-51 | -8.615850e-47 |
| Msa0820530 | Msa1160360 | -0.808372 | 3.198543e-50 | -8.615850e-47 |
| Msa0820530 | Msa1163870 | -0.817155 | 3.819232e-52 | -8.615850e-47 |
| Msa0820530 | Msa1164020 | -0.804109 | 2.529159e-49 | -8.615850e-47 |
| Msa0820530 | Msa1171770 | 0.829442 | 5.136582e-55 | -8.615850e-47 |
| Msa0820530 | Msa1172130 | 0.834904 | 2.288278e-56 | -8.615850e-47 |
| Msa0820530 | Msa1174310 | -0.835519 | 1.600982e-56 | -8.615850e-47 |
| Msa0820530 | Msa1176980 | -0.828837 | 7.198813e-55 | -8.615850e-47 |
| Msa0820530 | Msa1178050 | -0.839943 | 1.170571e-57 | -8.615850e-47 |
| Msa0820530 | Msa1179020 | 0.811590 | 6.487222e-51 | -8.615850e-47 |
| Msa0820530 | Msa1181170 | 0.810628 | 1.048679e-50 | -8.615850e-47 |
| Msa0820530 | Msa1182640 | -0.817437 | 3.299847e-52 | -8.615850e-47 |
| Msa0820530 | Msa1199710 | -0.816252 | 6.087523e-52 | -8.615850e-47 |
| Msa0820530 | Msa1203880 | -0.802618 | 5.150869e-49 | -8.615850e-47 |
| Msa0820530 | Msa1211000 | -0.831379 | 1.726137e-55 | -8.615850e-47 |
| Msa0820530 | Msa1211050 | 0.839568 | 1.466089e-57 | -8.615850e-47 |
| Msa0820530 | Msa1211350 | -0.804691 | 1.913014e-49 | -8.615850e-47 |
| Msa0820530 | Msa1229850 | -0.800236 | 1.584151e-48 | -8.615850e-47 |
| Msa0820530 | Msa1236070 | 0.821898 | 3.161129e-53 | -8.615850e-47 |
| Msa0820530 | Msa1246530 | 0.819167 | 1.338691e-52 | -8.615850e-47 |
| Msa0820530 | Msa1259400 | -0.830597 | 2.685489e-55 | -8.615850e-47 |
| Msa0820530 | Msa1272520 | -0.807702 | 4.442778e-50 | -8.615850e-47 |
| Msa0820530 | Msa1293590 | -0.812119 | 4.976150e-51 | -8.615850e-47 |
| Msa0820530 | Msa1296300 | -0.843159 | 1.663508e-58 | -8.615850e-47 |
| Msa0820530 | Msa1298550 | 0.807857 | 4.117655e-50 | -8.615850e-47 |
| Msa0820530 | Msa1300350 | 0.814647 | 1.385008e-51 | -8.615850e-47 |
| Msa0820530 | Msa1314770 | -0.826253 | 3.002616e-54 | -8.615850e-47 |
| Msa0820530 | Msa1329800 | -0.808452 | 3.076277e-50 | -8.615850e-47 |
| Msa0820530 | Msa1330890 | 0.819202 | 1.314172e-52 | -8.615850e-47 |
| Msa0820530 | Msa1339190 | -0.804895 | 1.734200e-49 | -8.615850e-47 |
| Msa0820530 | Msa1340830 | -0.834522 | 2.854326e-56 | -8.615850e-47 |
| Msa0820530 | Msa1350690 | -0.832828 | 7.564978e-56 | -8.615850e-47 |
| Msa0820530 | Msa1360280 | -0.818300 | 2.106716e-52 | -8.615850e-47 |
| Msa0820530 | Msa1363700 | -0.860494 | 1.986796e-63 | -8.615850e-47 |
| Msa0820530 | Msa1365860 | -0.828869 | 7.073598e-55 | -8.615850e-47 |
| Msa0820530 | Msa1366650 | -0.804031 | 2.625535e-49 | -8.615850e-47 |
| Msa0820530 | Msa1371090 | -0.836346 | 9.874824e-57 | -8.615850e-47 |
| Msa0820530 | Msa1372310 | -0.813680 | 2.264629e-51 | -8.615850e-47 |
| Msa0820530 | Msa1383350 | -0.806055 | 9.905177e-50 | -8.615850e-47 |
| Msa0820530 | Msa1393800 | -0.837502 | 5.004197e-57 | -8.615850e-47 |
| Msa0820530 | Msa1396940 | -0.811647 | 6.306556e-51 | -8.615850e-47 |
| Msa0820530 | Msa1403580 | 0.833613 | 4.822374e-56 | -8.615850e-47 |
| Msa0820530 | Msa1412930 | 0.837198 | 5.989314e-57 | -8.615850e-47 |
| Msa0820530 | Msa1417810 | 0.801615 | 8.280829e-49 | -8.615850e-47 |
| Msa0820530 | Msa1422840 | -0.838689 | 2.477743e-57 | -8.615850e-47 |
| Msa0820530 | Msa1425340 | -0.809202 | 2.125693e-50 | -8.615850e-47 |
| Msa0820530 | Msa1426920 | -0.806483 | 8.047316e-50 | -8.615850e-47 |
| Msa0820530 | Msa1438450 | -0.807966 | 3.904866e-50 | -8.615850e-47 |
| Msa0820530 | Msa1438640 | -0.800617 | 1.324832e-48 | -8.615850e-47 |
| Msa0820530 | Msa1442220 | 0.808249 | 3.398341e-50 | -8.615850e-47 |
| Msa0820530 | Msa1443290 | 0.818352 | 2.049750e-52 | -8.615850e-47 |
| Msa0820530 | Msa1445400 | 0.802540 | 5.345438e-49 | -8.615850e-47 |
| Msa0820530 | Msa1449350 | 0.805631 | 1.216342e-49 | -8.615850e-47 |
| Msa0820530 | Msa1452470 | -0.802668 | 5.029070e-49 | -8.615850e-47 |
| Msa0820530 | Msa1458030 | -0.820874 | 5.446989e-53 | -8.615850e-47 |
| Msa0820530 | Msa1458810 | -0.804501 | 2.096018e-49 | -8.615850e-47 |
| Msa0820530 | Msa1463600 | -0.826373 | 2.810873e-54 | -8.615850e-47 |
| Msa0126910 | Msa0820530 | -0.811065 | 8.435718e-51 | -8.615850e-47 |
| Msa0131450 | Msa0820530 | -0.830563 | 2.737453e-55 | -8.615850e-47 |
| Msa0140400 | Msa0820530 | -0.832339 | 1.000327e-55 | -8.615850e-47 |
| Msa0140520 | Msa0820530 | 0.825982 | 3.482503e-54 | -8.615850e-47 |
| Msa0161070 | Msa0820530 | 0.827487 | 1.522553e-54 | -8.615850e-47 |
| Msa0163560 | Msa0820530 | -0.833962 | 3.944626e-56 | -8.615850e-47 |
| Msa0165970 | Msa0820530 | -0.808967 | 2.387499e-50 | -8.615850e-47 |
| Msa0175200 | Msa0820530 | -0.801982 | 6.963560e-49 | -8.615850e-47 |
| Msa0176330 | Msa0820530 | -0.838903 | 2.180912e-57 | -8.615850e-47 |
| Msa0177230 | Msa0820530 | -0.804559 | 2.038340e-49 | -8.615850e-47 |
| Msa0183460 | Msa0820530 | -0.819913 | 9.048345e-53 | -8.615850e-47 |
| Msa0183870 | Msa0820530 | -0.810758 | 9.830886e-51 | -8.615850e-47 |
| Msa0187060 | Msa0820530 | -0.807547 | 4.791482e-50 | -8.615850e-47 |
| Msa0188680 | Msa0820530 | 0.804415 | 2.183979e-49 | -8.615850e-47 |
| Msa0194720 | Msa0820530 | -0.821277 | 4.398683e-53 | -8.615850e-47 |
| Msa0197610 | Msa0820530 | -0.801682 | 8.023827e-49 | -8.615850e-47 |
| Msa0198940 | Msa0820530 | -0.817507 | 3.181311e-52 | -8.615850e-47 |
| Msa0208810 | Msa0820530 | -0.807896 | 4.039681e-50 | -8.615850e-47 |
| Msa0212750 | Msa0820530 | 0.835849 | 1.320807e-56 | -8.615850e-47 |
| Msa0227310 | Msa0820530 | 0.812477 | 4.156729e-51 | -8.615850e-47 |
| Msa0229360 | Msa0820530 | -0.803289 | 3.742394e-49 | -8.615850e-47 |
| Msa0365490 | Msa0820530 | -0.809408 | 1.920525e-50 | -8.615850e-47 |
| Msa0375980 | Msa0820530 | -0.808995 | 2.355116e-50 | -8.615850e-47 |
| Msa0377530 | Msa0820530 | -0.803269 | 3.778521e-49 | -8.615850e-47 |
| Msa0387910 | Msa0820530 | -0.808479 | 3.034678e-50 | -8.615850e-47 |
| Msa0388030 | Msa0820530 | 0.803192 | 3.919443e-49 | -8.615850e-47 |
| Msa0404700 | Msa0820530 | -0.830181 | 3.394345e-55 | -8.615850e-47 |
| Msa0410300 | Msa0820530 | -0.805029 | 1.625718e-49 | -8.615850e-47 |
| Msa0419520 | Msa0820530 | -0.823764 | 1.161834e-53 | -8.615850e-47 |
| Msa0419640 | Msa0820530 | 0.822765 | 1.987837e-53 | -8.615850e-47 |
| Msa0421330 | Msa0820530 | 0.814297 | 1.655371e-51 | -8.615850e-47 |
| Msa0426810 | Msa0820530 | -0.823107 | 1.655159e-53 | -8.615850e-47 |
| Msa0436190 | Msa0820530 | -0.845676 | 3.500060e-59 | -8.615850e-47 |
| Msa0439890 | Msa0820530 | -0.839517 | 1.510965e-57 | -8.615850e-47 |
| Msa0449820 | Msa0820530 | -0.819194 | 1.320260e-52 | -8.615850e-47 |
| Msa0461590 | Msa0820530 | -0.818355 | 2.047257e-52 | -8.615850e-47 |
| Msa0462540 | Msa0820530 | -0.837809 | 4.173838e-57 | -8.615850e-47 |
| Msa0464900 | Msa0820530 | -0.802528 | 5.374279e-49 | -8.615850e-47 |
| Msa0239940 | Msa0820530 | -0.818265 | 2.144755e-52 | -8.615850e-47 |
| Msa0241740 | Msa0820530 | -0.835611 | 1.517493e-56 | -8.615850e-47 |
| Msa0251770 | Msa0820530 | -0.817821 | 2.703529e-52 | -8.615850e-47 |
| Msa0259270 | Msa0820530 | -0.803793 | 2.942625e-49 | -8.615850e-47 |
| Msa0265160 | Msa0820530 | -0.833121 | 6.397778e-56 | -8.615850e-47 |
| Msa0266210 | Msa0820530 | -0.829535 | 4.874297e-55 | -8.615850e-47 |
| Msa0267870 | Msa0820530 | -0.814442 | 1.537728e-51 | -8.615850e-47 |
| Msa0270220 | Msa0820530 | 0.815764 | 7.820919e-52 | -8.615850e-47 |
| Msa0275400 | Msa0820530 | 0.809226 | 2.100736e-50 | -8.615850e-47 |
| Msa0287670 | Msa0820530 | -0.832474 | 9.260521e-56 | -8.615850e-47 |
| Msa0289400 | Msa0820530 | -0.806610 | 7.565011e-50 | -8.615850e-47 |
| Msa0299730 | Msa0820530 | -0.801681 | 8.028603e-49 | -8.615850e-47 |
| Msa0307560 | Msa0820530 | -0.816386 | 5.681637e-52 | -8.615850e-47 |
| Msa0307830 | Msa0820530 | 0.821777 | 3.371517e-53 | -8.615850e-47 |
| Msa0308200 | Msa0820530 | -0.816040 | 6.787639e-52 | -8.615850e-47 |
| Msa0308220 | Msa0820530 | -0.818604 | 1.797243e-52 | -8.615850e-47 |
| Msa0320610 | Msa0820530 | -0.814827 | 1.263434e-51 | -8.615850e-47 |
| Msa0327410 | Msa0820530 | -0.815730 | 7.958617e-52 | -8.615850e-47 |
| Msa0328210 | Msa0820530 | -0.807570 | 4.738096e-50 | -8.615850e-47 |
| Msa0335320 | Msa0820530 | 0.838398 | 2.945143e-57 | -8.615850e-47 |
| Msa0341890 | Msa0820530 | -0.814790 | 1.287864e-51 | -8.615850e-47 |
| Msa0342290 | Msa0820530 | -0.803114 | 4.067996e-49 | -8.615850e-47 |
| Msa0363170 | Msa0820530 | -0.814433 | 1.544575e-51 | -8.615850e-47 |
| Msa0491520 | Msa0820530 | -0.804424 | 2.175036e-49 | -8.615850e-47 |
| Msa0493920 | Msa0820530 | -0.830683 | 2.557388e-55 | -8.615850e-47 |
| Msa0505060 | Msa0820530 | -0.849761 | 2.627438e-60 | -8.615850e-47 |
| Msa0506940 | Msa0820530 | -0.804225 | 2.392549e-49 | -8.615850e-47 |
| Msa0524600 | Msa0820530 | -0.855848 | 4.790853e-62 | -8.615850e-47 |
| Msa0534080 | Msa0820530 | -0.809015 | 2.331439e-50 | -8.615850e-47 |
| Msa0534410 | Msa0820530 | -0.855690 | 5.327790e-62 | -8.615850e-47 |
| Msa0536790 | Msa0820530 | -0.804253 | 2.360970e-49 | -8.615850e-47 |
| Msa0537770 | Msa0820530 | -0.801901 | 7.235699e-49 | -8.615850e-47 |
| Msa0557950 | Msa0820530 | 0.817934 | 2.548483e-52 | -8.615850e-47 |
| Msa0565620 | Msa0820530 | 0.831229 | 1.879031e-55 | -8.615850e-47 |
| Msa0578090 | Msa0820530 | -0.816808 | 4.568972e-52 | -8.615850e-47 |
| Msa0579370 | Msa0820530 | -0.823792 | 1.144233e-53 | -8.615850e-47 |
| Msa0585650 | Msa0820530 | 0.802324 | 5.920504e-49 | -8.615850e-47 |
| Msa0585790 | Msa0820530 | 0.804396 | 2.203868e-49 | -8.615850e-47 |
| Msa0587190 | Msa0820530 | -0.816688 | 4.860969e-52 | -8.615850e-47 |
| Msa0590650 | Msa0820530 | -0.842389 | 2.664149e-58 | -8.615850e-47 |
| Msa0591540 | Msa0820530 | -0.803132 | 4.032806e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0820530 | MtrunA17_Chr5g0440531 | 99.554 | 224 | 0 | 1 | 1 | 224 | 1 | 223 | 3.77e-158 | 436 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0820530 | AT5G21070.1 | 91.549 | 213 | 18 | 0 | 1 | 213 | 1 | 213 | 1.05e-140 | 393 |
Find 68 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTATATTATATTGTTTCTTA+TGG | 0.181972 | 5_3:+57933002 | Msa0820530:CDS |
| AAAATGTGGGGTTATGTTAA+TGG | 0.215187 | 5_3:-57931054 | None:intergenic |
| TTGCTACATTAGCAAGAAAT+TGG | 0.228195 | 5_3:-57931139 | None:intergenic |
| CAACCAACCCATGGAGAAAA+TGG | 0.257423 | 5_3:+57933050 | Msa0820530:CDS |
| AGAATCACATACTAACAAAA+AGG | 0.276044 | 5_3:-57931383 | None:intergenic |
| GATCATGATCATGAAACATT+AGG | 0.305094 | 5_3:-57934301 | None:intergenic |
| TTTCTTCATGCAGCTGCATT+TGG | 0.310371 | 5_3:+57932853 | Msa0820530:intron |
| TATATTATATTGTTTCTTAT+GGG | 0.319210 | 5_3:+57933003 | Msa0820530:CDS |
| CCAGTCAGCTGAAGTTTCAT+TGG | 0.343305 | 5_3:+57934219 | Msa0820530:CDS |
| GCACGACCCACGATGGAAAA+AGG | 0.348877 | 5_3:-57931336 | None:intergenic |
| CTCCATCAAAATTCACGATT+GGG | 0.349856 | 5_3:+57931174 | Msa0820530:five_prime_UTR |
| TTGAGATTGAAATTGTGAAT+TGG | 0.380090 | 5_3:+57934701 | Msa0820530:three_prime_UTR |
| GGTTCAGTACTGTGTTTAGT+AGG | 0.390490 | 5_3:+57934269 | Msa0820530:CDS |
| ATCATGATCATGAAACATTA+GGG | 0.391083 | 5_3:-57934300 | None:intergenic |
| ACAATGCAGGAACAAGAATA+AGG | 0.393351 | 5_3:-57933083 | None:intergenic |
| ACCATGGCTAACACCATTGC+TGG | 0.396531 | 5_3:+57932925 | Msa0820530:CDS |
| TCGTGGGTCGTGCTCAGAAA+TGG | 0.405397 | 5_3:+57931346 | Msa0820530:CDS |
| AGAGGTGAATCTGGTTGAAA+TGG | 0.421220 | 5_3:-57931086 | None:intergenic |
| CATCTTGATGTAGTTAAAGT+TGG | 0.422076 | 5_3:+57934486 | Msa0820530:three_prime_UTR |
| TCCTTGTGCTACAACACTTC+CGG | 0.425642 | 5_3:+57933107 | Msa0820530:CDS |
| CCATCATCGTGCTGCTACTC+AGG | 0.429667 | 5_3:+57933172 | Msa0820530:CDS |
| CAGTCAGCTGAAGTTTCATT+GGG | 0.429778 | 5_3:+57934220 | Msa0820530:CDS |
| TCCGATTGTGGACAGATCTT+CGG | 0.435752 | 5_3:-57931262 | None:intergenic |
| ATGAAGGTAAGAGGTGAATC+TGG | 0.438571 | 5_3:-57931095 | None:intergenic |
| GTTGGTTGTGCGAATGACTA+TGG | 0.440768 | 5_3:-57933035 | None:intergenic |
| ATATTGTTTCTTATGGGAAA+AGG | 0.442916 | 5_3:+57933009 | Msa0820530:CDS |
| TTTGGGTAGGATATATGAAA+AGG | 0.443316 | 5_3:-57931200 | None:intergenic |
| CTTCCGGTATTTCTTGCTGT+TGG | 0.456150 | 5_3:+57933123 | Msa0820530:CDS |
| CCTCCATCAAAATTCACGAT+TGG | 0.467246 | 5_3:+57931173 | Msa0820530:five_prime_UTR |
| CCAATGAAACTTCAGCTGAC+TGG | 0.468584 | 5_3:-57934219 | None:intergenic |
| GTAATATCCACTTCACTGCT+TGG | 0.470781 | 5_3:+57932889 | Msa0820530:CDS |
| GATCATGATCATCATAATCA+TGG | 0.471396 | 5_3:+57934314 | Msa0820530:CDS |
| CACCATTGCTGGTGAAGAAA+CGG | 0.471872 | 5_3:+57932936 | Msa0820530:CDS |
| CGGTACGACAAACTTCTTGT+TGG | 0.472038 | 5_3:+57934248 | Msa0820530:CDS |
| GTGGAGAAAATGAAGGTAAG+AGG | 0.484167 | 5_3:-57931104 | None:intergenic |
| TCGGCGGTGAAACTATTCAT+TGG | 0.486985 | 5_3:-57931243 | None:intergenic |
| CACCGTTTCTTCACCAGCAA+TGG | 0.491505 | 5_3:-57932938 | None:intergenic |
| GCCGAAGATCTGTCCACAAT+CGG | 0.512818 | 5_3:+57931261 | Msa0820530:CDS |
| CATGGAGAAGTAGCTTCTGT+TGG | 0.520447 | 5_3:+57934332 | Msa0820530:CDS |
| TTTCCAACAGCAAGAAATAC+CGG | 0.522021 | 5_3:-57933126 | None:intergenic |
| CCTGAGTAGCAGCACGATGA+TGG | 0.531732 | 5_3:-57933172 | None:intergenic |
| GGTGAATCTGGTTGAAATGG+AGG | 0.534616 | 5_3:-57931083 | None:intergenic |
| ATGGAGAAAATGGCTGTAGC+CGG | 0.543633 | 5_3:+57933060 | Msa0820530:CDS |
| TGCAGGAACAAGAATAAGGC+CGG | 0.546884 | 5_3:-57933079 | None:intergenic |
| TGGAAATTCATCTTCCATGA+TGG | 0.557206 | 5_3:+57933143 | Msa0820530:CDS |
| TTGTTTCTTATGGGAAAAGG+TGG | 0.564015 | 5_3:+57933012 | Msa0820530:CDS |
| AAATGTAGTGGAGAAAATGA+AGG | 0.567536 | 5_3:-57931111 | None:intergenic |
| TCAGCTGAAGTTTCATTGGG+TGG | 0.570047 | 5_3:+57934223 | Msa0820530:CDS |
| ATTCATTCATTCCCACACAC+TGG | 0.574555 | 5_3:+57931310 | Msa0820530:CDS |
| GATGATGGCGAGCACCATCA+TGG | 0.575961 | 5_3:-57933157 | None:intergenic |
| ACCAGCAATGGTGTTAGCCA+TGG | 0.579988 | 5_3:-57932926 | None:intergenic |
| AAATTGGAAGAGAAATGTAG+TGG | 0.581757 | 5_3:-57931123 | None:intergenic |
| GAATGAATGGAGAATCGATA+CGG | 0.585205 | 5_3:-57931295 | None:intergenic |
| GGTGGCGATTCCTCCGATTG+TGG | 0.590372 | 5_3:-57931274 | None:intergenic |
| AGTGTGTGGGAATGAATGAA+TGG | 0.597694 | 5_3:-57931308 | None:intergenic |
| TGAAGTTTCATTGGGTGGAG+CGG | 0.604217 | 5_3:+57934228 | Msa0820530:CDS |
| TGTTATACCAAGCAGTGAAG+TGG | 0.610049 | 5_3:-57932896 | None:intergenic |
| TGCTACTAGTGAAGTCATCA+CGG | 0.618966 | 5_3:-57934180 | None:intergenic |
| ACCGGAAGTGTTGTAGCACA+AGG | 0.633410 | 5_3:-57933108 | None:intergenic |
| GTAGCACAAGGAGACAATGC+AGG | 0.649814 | 5_3:-57933096 | None:intergenic |
| GAAGATCTGTCCACAATCGG+AGG | 0.656287 | 5_3:+57931264 | Msa0820530:CDS |
| TCATTCGCACAACCAACCCA+TGG | 0.656854 | 5_3:+57933041 | Msa0820530:CDS |
| TTTCTGAGCACGACCCACGA+TGG | 0.671416 | 5_3:-57931343 | None:intergenic |
| GATTGTGGACAGATCTTCGG+CGG | 0.685117 | 5_3:-57931259 | None:intergenic |
| TGGTATAACAGCAATTACCA+TGG | 0.692649 | 5_3:+57932909 | Msa0820530:CDS |
| ACAACATCATTATCTTCACA+TGG | 0.703625 | 5_3:-57934524 | None:intergenic |
| GATATTTATATACTCTCACA+AGG | 0.706291 | 5_3:-57934381 | None:intergenic |
| TGAATGGAGAATCGATACGG+TGG | 0.708294 | 5_3:-57931292 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAAATGAAACTTTTTT+GGG | - | chr5_3:57931220-57931239 | None:intergenic | 10.0% |
| !!! | AAAAAAAAATGAAACTTTTT+TGG | - | chr5_3:57931221-57931240 | None:intergenic | 10.0% |
| !! | AAAAGAAAAATATGAAAAAA+TGG | - | chr5_3:57931427-57931446 | None:intergenic | 10.0% |
| !!! | ATTTTTTCATATTTTTCTTT+TGG | + | chr5_3:57931426-57931445 | Msa0820530:intron | 10.0% |
| !!! | AATTAAACTATTTGTTATAA+TGG | + | chr5_3:57931679-57931698 | Msa0820530:intron | 10.0% |
| !! | ATTTATATAACAAAAGATAA+TGG | + | chr5_3:57931851-57931870 | Msa0820530:intron | 10.0% |
| !! | TTTATATAACAAAAGATAAT+GGG | + | chr5_3:57931852-57931871 | Msa0820530:intron | 10.0% |
| !!! | ATGTATTGTTTTTTTTTTTT+TGG | + | chr5_3:57932398-57932417 | Msa0820530:intron | 10.0% |
| !!! | TATATTATATTGTTTCTTAT+GGG | + | chr5_3:57933003-57933022 | Msa0820530:CDS | 10.0% |
| !!! | AGTGTTATTTATTATAGTAT+AGG | + | chr5_3:57931531-57931550 | Msa0820530:intron | 15.0% |
| !!! | GTATATTATATTGTTTCTTA+TGG | + | chr5_3:57933002-57933021 | Msa0820530:CDS | 15.0% |
| !! | CGTGTAAAAAAAAAATTACA+CGG | - | chr5_3:57931577-57931596 | None:intergenic | 20.0% |
| !!! | GAAAGCAATTTAACTTATTT+CGG | - | chr5_3:57932100-57932119 | None:intergenic | 20.0% |
| !! | TGTTCTATTAGTAAAATGAA+CGG | - | chr5_3:57932767-57932786 | None:intergenic | 20.0% |
| !!! | TGGTTATCAAGATTATATTT+TGG | + | chr5_3:57933291-57933310 | Msa0820530:intron | 20.0% |
| !! | AATTATGCAAAAATAGTAAG+AGG | - | chr5_3:57933674-57933693 | None:intergenic | 20.0% |
| !! | ATAAGCATTTATATGATAAG+CGG | + | chr5_3:57934049-57934068 | Msa0820530:intron | 20.0% |
| !! | AAAACTTGTACAAACTAATT+TGG | - | chr5_3:57934101-57934120 | None:intergenic | 20.0% |
| !!! | AAAAATCATGGAAAAGTTTT+TGG | + | chr5_3:57934664-57934683 | Msa0820530:intron | 20.0% |
| !!! | AAAATGAAACTTTTTTGGGT+AGG | - | chr5_3:57931216-57931235 | None:intergenic | 25.0% |
| ! | GAATCACATACTAACAAAAA+GGG | - | chr5_3:57931385-57931404 | None:intergenic | 25.0% |
| ! | AGAATCACATACTAACAAAA+AGG | - | chr5_3:57931386-57931405 | None:intergenic | 25.0% |
| !!! | CTTTTGGTTATTTGTTCTTA+TGG | + | chr5_3:57931442-57931461 | Msa0820530:intron | 25.0% |
| ! | TTGAACAAGTTGTGTTAAAA+TGG | + | chr5_3:57931507-57931526 | Msa0820530:intron | 25.0% |
| !!! | AATATTGAAGCTTTAGTTTG+TGG | + | chr5_3:57931705-57931724 | Msa0820530:intron | 25.0% |
| !!! | ATATTGAAGCTTTAGTTTGT+GGG | + | chr5_3:57931706-57931725 | Msa0820530:intron | 25.0% |
| ! | TTGTGGGTCTTAAATAATTA+CGG | + | chr5_3:57931722-57931741 | Msa0820530:intron | 25.0% |
| ! | TAGTTTATGTGCATTAGATT+TGG | + | chr5_3:57931774-57931793 | Msa0820530:intron | 25.0% |
| ! | AGTTTATGTGCATTAGATTT+GGG | + | chr5_3:57931775-57931794 | Msa0820530:intron | 25.0% |
| ! | AGTAGTATAAGAAAATAAGC+TGG | - | chr5_3:57931917-57931936 | None:intergenic | 25.0% |
| !! | GTTAATTTTATTAGCTATCC+TGG | + | chr5_3:57932199-57932218 | Msa0820530:intron | 25.0% |
| ! | GATAAACTCAAATAAGTCAA+TGG | + | chr5_3:57932369-57932388 | Msa0820530:intron | 25.0% |
| ! | GTTGTACAAACAATACATAA+AGG | - | chr5_3:57932429-57932448 | None:intergenic | 25.0% |
| ! | TATGGAAAATCATGTCTATT+TGG | + | chr5_3:57932569-57932588 | Msa0820530:intron | 25.0% |
| !!! | AGTTGCAAATGTTATTTTAG+AGG | - | chr5_3:57932648-57932667 | None:intergenic | 25.0% |
| !! | ATATTGTTTCTTATGGGAAA+AGG | + | chr5_3:57933009-57933028 | Msa0820530:CDS | 25.0% |
| !!! | TTATTTTTACTGCTGCTTTT+TGG | + | chr5_3:57933203-57933222 | Msa0820530:intron | 25.0% |
| !! | ATAATCTTGATAACCAAGAT+AGG | - | chr5_3:57933287-57933306 | None:intergenic | 25.0% |
| ! | ACAAGTAATTCACATTAAAC+AGG | + | chr5_3:57933496-57933515 | Msa0820530:intron | 25.0% |
| ! | GTTAATATCTGTTCAAAACT+AGG | - | chr5_3:57933634-57933653 | None:intergenic | 25.0% |
| ! | TCAAATAAGTCAATCAAAAC+TGG | - | chr5_3:57933841-57933860 | None:intergenic | 25.0% |
| ! | ACTTATTTGAGCTTATTTGT+TGG | + | chr5_3:57933851-57933870 | Msa0820530:intron | 25.0% |
| !! | AGTTTGTACAAGTTTTTGTT+TGG | + | chr5_3:57934105-57934124 | Msa0820530:intron | 25.0% |
| !!! | GTTTGTACAAGTTTTTGTTT+GGG | + | chr5_3:57934106-57934125 | Msa0820530:intron | 25.0% |
| !!! | TTTGTACAAGTTTTTGTTTG+GGG | + | chr5_3:57934107-57934126 | Msa0820530:intron | 25.0% |
| !!! | TAGTAGCATTGTCATTTTAT+GGG | + | chr5_3:57934195-57934214 | Msa0820530:CDS | 25.0% |
| ! | ATCATGATCATGAAACATTA+GGG | - | chr5_3:57934303-57934322 | None:intergenic | 25.0% |
| ! | GATATTTATATACTCTCACA+AGG | - | chr5_3:57934384-57934403 | None:intergenic | 25.0% |
| ! | ATGATCATCTTGTCAAAAAA+TGG | + | chr5_3:57934584-57934603 | Msa0820530:intron | 25.0% |
| ! | TGAGTGATAACTAAAAATCA+TGG | + | chr5_3:57934652-57934671 | Msa0820530:intron | 25.0% |
| ! | TTGAGATTGAAATTGTGAAT+TGG | + | chr5_3:57934701-57934720 | Msa0820530:three_prime_UTR | 25.0% |
| AAAATGTGGGGTTATGTTAA+TGG | - | chr5_3:57931057-57931076 | None:intergenic | 30.0% | |
| ! | AAATGTAGTGGAGAAAATGA+AGG | - | chr5_3:57931114-57931133 | None:intergenic | 30.0% |
| AAATTGGAAGAGAAATGTAG+TGG | - | chr5_3:57931126-57931145 | None:intergenic | 30.0% | |
| TTGCTACATTAGCAAGAAAT+TGG | - | chr5_3:57931142-57931161 | None:intergenic | 30.0% | |
| ! | TTTTGATGGAGGATTCAAAA+GGG | - | chr5_3:57931165-57931184 | None:intergenic | 30.0% |
| !! | ATTTTGATGGAGGATTCAAA+AGG | - | chr5_3:57931166-57931185 | None:intergenic | 30.0% |
| TTTGGGTAGGATATATGAAA+AGG | - | chr5_3:57931203-57931222 | None:intergenic | 30.0% | |
| ! | CACGTAAAGTTTTACATTGT+CGG | + | chr5_3:57931648-57931667 | Msa0820530:intron | 30.0% |
| AAATAATTACGGATGTGAGA+TGG | + | chr5_3:57931733-57931752 | Msa0820530:intron | 30.0% | |
| ! | ACTGTTTTCATAAGCTATCT+TGG | - | chr5_3:57931942-57931961 | None:intergenic | 30.0% |
| AATAAGCTGAGAACATCTTA+TGG | + | chr5_3:57932234-57932253 | Msa0820530:intron | 30.0% | |
| TGACAGTTACTAGCTAAAAA+TGG | + | chr5_3:57932516-57932535 | Msa0820530:intron | 30.0% | |
| TTCTGAATAAGATACAGCTA+TGG | + | chr5_3:57932551-57932570 | Msa0820530:intron | 30.0% | |
| TTAGGTTCAAACATACGTTA+AGG | - | chr5_3:57932610-57932629 | None:intergenic | 30.0% | |
| CAGTTACATATGAATTGAAC+TGG | + | chr5_3:57932737-57932756 | Msa0820530:intron | 30.0% | |
| CTATTAGTAAAATGAACGGT+GGG | - | chr5_3:57932763-57932782 | None:intergenic | 30.0% | |
| TCTATTAGTAAAATGAACGG+TGG | - | chr5_3:57932764-57932783 | None:intergenic | 30.0% | |
| CAAAGTTAAAAACGAACTGT+GGG | - | chr5_3:57932828-57932847 | None:intergenic | 30.0% | |
| ACAAAGTTAAAAACGAACTG+TGG | - | chr5_3:57932829-57932848 | None:intergenic | 30.0% | |
| AATATTCCTAAAATCCTCTC+AGG | + | chr5_3:57933521-57933540 | Msa0820530:intron | 30.0% | |
| TTCTATATGTTCTCCAAGAT+AGG | + | chr5_3:57933951-57933970 | Msa0820530:intron | 30.0% | |
| ! | ACTGTTTTCTTAACCTATCT+TGG | - | chr5_3:57933967-57933986 | None:intergenic | 30.0% |
| !!! | CTAGTAGCATTGTCATTTTA+TGG | + | chr5_3:57934194-57934213 | Msa0820530:CDS | 30.0% |
| !!! | AGTAGCATTGTCATTTTATG+GGG | + | chr5_3:57934196-57934215 | Msa0820530:CDS | 30.0% |
| GATCATGATCATGAAACATT+AGG | - | chr5_3:57934304-57934323 | None:intergenic | 30.0% | |
| GATCATGATCATCATAATCA+TGG | + | chr5_3:57934314-57934333 | Msa0820530:CDS | 30.0% | |
| ! | CTTGTAATTTGACACTTTTG+AGG | + | chr5_3:57934403-57934422 | Msa0820530:three_prime_UTR | 30.0% |
| CATCTTGATGTAGTTAAAGT+TGG | + | chr5_3:57934486-57934505 | Msa0820530:three_prime_UTR | 30.0% | |
| ACAACATCATTATCTTCACA+TGG | - | chr5_3:57934527-57934546 | None:intergenic | 30.0% | |
| ! | TGCTCTTTATCTTTTATGTC+AGG | + | chr5_3:57934622-57934641 | Msa0820530:intron | 30.0% |
| CTCCATCAAAATTCACGATT+GGG | + | chr5_3:57931174-57931193 | Msa0820530:five_prime_UTR | 35.0% | |
| ! | AACCCAATCGTGAATTTTGA+TGG | - | chr5_3:57931179-57931198 | None:intergenic | 35.0% |
| GAATGAATGGAGAATCGATA+CGG | - | chr5_3:57931298-57931317 | None:intergenic | 35.0% | |
| !! | AACAAAAAGGGTTCTAGACA+GGG | - | chr5_3:57931373-57931392 | None:intergenic | 35.0% |
| !! | TAACAAAAAGGGTTCTAGAC+AGG | - | chr5_3:57931374-57931393 | None:intergenic | 35.0% |
| !! | GGCTAGTTTGAATTGACTTA+TGG | + | chr5_3:57931873-57931892 | Msa0820530:intron | 35.0% |
| TAACTTATTTCGGCTCTGTT+TGG | - | chr5_3:57932090-57932109 | None:intergenic | 35.0% | |
| CATGTCTATTTGGATTTCTG+TGG | + | chr5_3:57932579-57932598 | Msa0820530:intron | 35.0% | |
| AGGAACTGTACAGATACTTT+AGG | - | chr5_3:57932628-57932647 | None:intergenic | 35.0% | |
| TGGTATAACAGCAATTACCA+TGG | + | chr5_3:57932909-57932928 | Msa0820530:CDS | 35.0% | |
| !! | TCACTTTTGCTCGTATTTCT+CGG | + | chr5_3:57932973-57932992 | Msa0820530:CDS | 35.0% |
| ! | TTGTTTCTTATGGGAAAAGG+TGG | + | chr5_3:57933012-57933031 | Msa0820530:CDS | 35.0% |
| ACAATGCAGGAACAAGAATA+AGG | - | chr5_3:57933086-57933105 | None:intergenic | 35.0% | |
| TTTCCAACAGCAAGAAATAC+CGG | - | chr5_3:57933129-57933148 | None:intergenic | 35.0% | |
| TGGAAATTCATCTTCCATGA+TGG | + | chr5_3:57933143-57933162 | Msa0820530:CDS | 35.0% | |
| !!! | TTTTGGTGCTTCTTTTTCGA+AGG | + | chr5_3:57933220-57933239 | Msa0820530:intron | 35.0% |
| !!! | TATATTTTGGAACACTGCGT+CGG | + | chr5_3:57933304-57933323 | Msa0820530:intron | 35.0% |
| TGACGTGAGACATTTCTAAA+GGG | - | chr5_3:57933394-57933413 | None:intergenic | 35.0% | |
| TGAAATGTGATTTGACCATC+AGG | + | chr5_3:57933420-57933439 | Msa0820530:intron | 35.0% | |
| ATTGCATATTCATGTCCTGA+TGG | - | chr5_3:57933438-57933457 | None:intergenic | 35.0% | |
| ! | TCATTTCCTGAGAGGATTTT+AGG | - | chr5_3:57933530-57933549 | None:intergenic | 35.0% |
| !!! | TTTTTTGCTCATTTCCTGAG+AGG | - | chr5_3:57933538-57933557 | None:intergenic | 35.0% |
| TAAATCAAAGAACATGCGAG+TGG | - | chr5_3:57933583-57933602 | None:intergenic | 35.0% | |
| GTTCAATCTGCTTATTCAAC+TGG | - | chr5_3:57933612-57933631 | None:intergenic | 35.0% | |
| TCAAATGCAAGACAGAAATC+AGG | - | chr5_3:57933731-57933750 | None:intergenic | 35.0% | |
| AGAGCATAAGAAGGAATTTC+AGG | - | chr5_3:57933793-57933812 | None:intergenic | 35.0% | |
| !!! | TGATGCTAGTTTGGTTTTAG+AGG | + | chr5_3:57933815-57933834 | Msa0820530:intron | 35.0% |
| ATAAGCTGAAAACAGCTCAT+TGG | - | chr5_3:57933931-57933950 | None:intergenic | 35.0% | |
| ATGGAGGAGACGAAAAATGT+GGG | - | chr5_3:57931070-57931089 | None:intergenic | 40.0% | |
| AATGGAGGAGACGAAAAATG+TGG | - | chr5_3:57931071-57931090 | None:intergenic | 40.0% | |
| AGAGGTGAATCTGGTTGAAA+TGG | - | chr5_3:57931089-57931108 | None:intergenic | 40.0% | |
| ATGAAGGTAAGAGGTGAATC+TGG | - | chr5_3:57931098-57931117 | None:intergenic | 40.0% | |
| GTGGAGAAAATGAAGGTAAG+AGG | - | chr5_3:57931107-57931126 | None:intergenic | 40.0% | |
| !! | CCAATCGTGAATTTTGATGG+AGG | - | chr5_3:57931176-57931195 | None:intergenic | 40.0% |
| CCTCCATCAAAATTCACGAT+TGG | + | chr5_3:57931173-57931192 | Msa0820530:five_prime_UTR | 40.0% | |
| AGTGTGTGGGAATGAATGAA+TGG | - | chr5_3:57931311-57931330 | None:intergenic | 40.0% | |
| ATTCATTCATTCCCACACAC+TGG | + | chr5_3:57931310-57931329 | Msa0820530:CDS | 40.0% | |
| ! | AGTTTTACATTGTCGGTGCA+CGG | + | chr5_3:57931655-57931674 | Msa0820530:intron | 40.0% |
| TGTGCATTAGATTTGGGTGT+AGG | + | chr5_3:57931781-57931800 | Msa0820530:intron | 40.0% | |
| ACTGTTTGAGAGAGAGCTTA+TGG | - | chr5_3:57932323-57932342 | None:intergenic | 40.0% | |
| CATCCATGTTTCCTTTGAAC+TGG | + | chr5_3:57932802-57932821 | Msa0820530:intron | 40.0% | |
| TTTCTTCATGCAGCTGCATT+TGG | + | chr5_3:57932853-57932872 | Msa0820530:intron | 40.0% | |
| GTAATATCCACTTCACTGCT+TGG | + | chr5_3:57932889-57932908 | Msa0820530:CDS | 40.0% | |
| TGTTATACCAAGCAGTGAAG+TGG | - | chr5_3:57932899-57932918 | None:intergenic | 40.0% | |
| AATGCAGTGGTTTCCTATCT+TGG | + | chr5_3:57933271-57933290 | Msa0820530:intron | 40.0% | |
| GAATGGACATTCTGAATCGT+TGG | + | chr5_3:57933337-57933356 | Msa0820530:intron | 40.0% | |
| CTGACGTGAGACATTTCTAA+AGG | - | chr5_3:57933395-57933414 | None:intergenic | 40.0% | |
| ! | CTTTAGAAATGTCTCACGTC+AGG | + | chr5_3:57933393-57933412 | Msa0820530:intron | 40.0% |
| AGCATCAACAGAGCATAAGA+AGG | - | chr5_3:57933802-57933821 | None:intergenic | 40.0% | |
| ATGCTCTGTTGATGCTAGTT+TGG | + | chr5_3:57933806-57933825 | Msa0820530:intron | 40.0% | |
| TAAGCACTTGTGAGACTGTT+TGG | + | chr5_3:57933876-57933895 | Msa0820530:intron | 40.0% | |
| AAGCACTTGTGAGACTGTTT+GGG | + | chr5_3:57933877-57933896 | Msa0820530:intron | 40.0% | |
| AGACTGTTTGGGAGAACTTA+TGG | + | chr5_3:57933888-57933907 | Msa0820530:intron | 40.0% | |
| TGCTACTAGTGAAGTCATCA+CGG | - | chr5_3:57934183-57934202 | None:intergenic | 40.0% | |
| CAGTCAGCTGAAGTTTCATT+GGG | + | chr5_3:57934220-57934239 | Msa0820530:CDS | 40.0% | |
| GGTTCAGTACTGTGTTTAGT+AGG | + | chr5_3:57934269-57934288 | Msa0820530:CDS | 40.0% | |
| !! | GACACTTTTGAGGATTGTCA+CGG | + | chr5_3:57934413-57934432 | Msa0820530:three_prime_UTR | 40.0% |
| TGGAGGAGACGAAAAATGTG+GGG | - | chr5_3:57931069-57931088 | None:intergenic | 45.0% | |
| GGTGAATCTGGTTGAAATGG+AGG | - | chr5_3:57931086-57931105 | None:intergenic | 45.0% | |
| TCGGCGGTGAAACTATTCAT+TGG | - | chr5_3:57931246-57931265 | None:intergenic | 45.0% | |
| TCCGATTGTGGACAGATCTT+CGG | - | chr5_3:57931265-57931284 | None:intergenic | 45.0% | |
| TGAATGGAGAATCGATACGG+TGG | - | chr5_3:57931295-57931314 | None:intergenic | 45.0% | |
| GAAAAAGGAAGCCAGTGTGT+GGG | - | chr5_3:57931324-57931343 | None:intergenic | 45.0% | |
| ! | TGGCTTCCTTTTTCCATCGT+GGG | + | chr5_3:57931330-57931349 | Msa0820530:CDS | 45.0% |
| TTACGGATGTGAGATGGAAG+AGG | + | chr5_3:57931739-57931758 | Msa0820530:intron | 45.0% | |
| TACGGATGTGAGATGGAAGA+GGG | + | chr5_3:57931740-57931759 | Msa0820530:intron | 45.0% | |
| CTTATTTCCTCAAGCTCTCC+AGG | - | chr5_3:57932220-57932239 | None:intergenic | 45.0% | |
| CACCATTGCTGGTGAAGAAA+CGG | + | chr5_3:57932936-57932955 | Msa0820530:CDS | 45.0% | |
| ! | CTTTTGCTCGTATTTCTCGG+TGG | + | chr5_3:57932976-57932995 | Msa0820530:CDS | 45.0% |
| GTTGGTTGTGCGAATGACTA+TGG | - | chr5_3:57933038-57933057 | None:intergenic | 45.0% | |
| CAACCAACCCATGGAGAAAA+TGG | + | chr5_3:57933050-57933069 | Msa0820530:CDS | 45.0% | |
| !! | GCTACAGCCATTTTCTCCAT+GGG | - | chr5_3:57933060-57933079 | None:intergenic | 45.0% |
| ATGGAGAAAATGGCTGTAGC+CGG | + | chr5_3:57933060-57933079 | Msa0820530:CDS | 45.0% | |
| TGCAGGAACAAGAATAAGGC+CGG | - | chr5_3:57933082-57933101 | None:intergenic | 45.0% | |
| TCCTTGTGCTACAACACTTC+CGG | + | chr5_3:57933107-57933126 | Msa0820530:CDS | 45.0% | |
| ! | CTTCCGGTATTTCTTGCTGT+TGG | + | chr5_3:57933123-57933142 | Msa0820530:CDS | 45.0% |
| ! | GCGTCGGTAGTTATCAAGAA+TGG | + | chr5_3:57933320-57933339 | Msa0820530:intron | 45.0% |
| CTCATTGGCATGTCATTAGC+TGG | - | chr5_3:57933916-57933935 | None:intergenic | 45.0% | |
| TTTGGCATCTAGCGCATGTT+TGG | - | chr5_3:57934083-57934102 | None:intergenic | 45.0% | |
| CCAATGAAACTTCAGCTGAC+TGG | - | chr5_3:57934222-57934241 | None:intergenic | 45.0% | |
| CCAGTCAGCTGAAGTTTCAT+TGG | + | chr5_3:57934219-57934238 | Msa0820530:CDS | 45.0% | |
| TCAGCTGAAGTTTCATTGGG+TGG | + | chr5_3:57934223-57934242 | Msa0820530:CDS | 45.0% | |
| TGAAGTTTCATTGGGTGGAG+CGG | + | chr5_3:57934228-57934247 | Msa0820530:CDS | 45.0% | |
| CGGTACGACAAACTTCTTGT+TGG | + | chr5_3:57934248-57934267 | Msa0820530:CDS | 45.0% | |
| CATGGAGAAGTAGCTTCTGT+TGG | + | chr5_3:57934332-57934351 | Msa0820530:CDS | 45.0% | |
| !! | AAAATTTATTAATAATTTCA+TGG | + | chr5_3:57933554-57933573 | Msa0820530:intron | 5.0% |
| GATTGTGGACAGATCTTCGG+CGG | - | chr5_3:57931262-57931281 | None:intergenic | 50.0% | |
| GCCGAAGATCTGTCCACAAT+CGG | + | chr5_3:57931261-57931280 | Msa0820530:CDS | 50.0% | |
| GAAGATCTGTCCACAATCGG+AGG | + | chr5_3:57931264-57931283 | Msa0820530:CDS | 50.0% | |
| GGAAAAAGGAAGCCAGTGTG+TGG | - | chr5_3:57931325-57931344 | None:intergenic | 50.0% | |
| ! | CTGGCTTCCTTTTTCCATCG+TGG | + | chr5_3:57931329-57931348 | Msa0820530:CDS | 50.0% |
| TAGCTATCCTGGAGAGCTTG+AGG | + | chr5_3:57932210-57932229 | Msa0820530:intron | 50.0% | |
| GGGCCAGTTCAAAGGAAACA+TGG | - | chr5_3:57932808-57932827 | None:intergenic | 50.0% | |
| ACCATGGCTAACACCATTGC+TGG | + | chr5_3:57932925-57932944 | Msa0820530:CDS | 50.0% | |
| ! | ACCAGCAATGGTGTTAGCCA+TGG | - | chr5_3:57932929-57932948 | None:intergenic | 50.0% |
| CACCGTTTCTTCACCAGCAA+TGG | - | chr5_3:57932941-57932960 | None:intergenic | 50.0% | |
| TCATTCGCACAACCAACCCA+TGG | + | chr5_3:57933041-57933060 | Msa0820530:CDS | 50.0% | |
| !! | CAGCCATTTTCTCCATGGGT+TGG | - | chr5_3:57933056-57933075 | None:intergenic | 50.0% |
| !! | GGCTACAGCCATTTTCTCCA+TGG | - | chr5_3:57933061-57933080 | None:intergenic | 50.0% |
| GTAGCACAAGGAGACAATGC+AGG | - | chr5_3:57933099-57933118 | None:intergenic | 50.0% | |
| !! | ACCGGAAGTGTTGTAGCACA+AGG | - | chr5_3:57933111-57933130 | None:intergenic | 50.0% |
| GCTTTCGTGTGCAAATGCAG+TGG | + | chr5_3:57933258-57933277 | Msa0820530:intron | 50.0% | |
| GCACGACCCACGATGGAAAA+AGG | - | chr5_3:57931339-57931358 | None:intergenic | 55.0% | |
| TTTCTGAGCACGACCCACGA+TGG | - | chr5_3:57931346-57931365 | None:intergenic | 55.0% | |
| TCGTGGGTCGTGCTCAGAAA+TGG | + | chr5_3:57931346-57931365 | Msa0820530:CDS | 55.0% | |
| GGATGTGAGATGGAAGAGGG+TGG | + | chr5_3:57931743-57931762 | Msa0820530:intron | 55.0% | |
| CGAACTGTGGGCCAGTTCAA+AGG | - | chr5_3:57932816-57932835 | None:intergenic | 55.0% | |
| ! | GATGATGGCGAGCACCATCA+TGG | - | chr5_3:57933160-57933179 | None:intergenic | 55.0% |
| CCTGAGTAGCAGCACGATGA+TGG | - | chr5_3:57933175-57933194 | None:intergenic | 55.0% | |
| ! | CCATCATCGTGCTGCTACTC+AGG | + | chr5_3:57933172-57933191 | Msa0820530:CDS | 55.0% |
| GGTGGCGATTCCTCCGATTG+TGG | - | chr5_3:57931277-57931296 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 57931047 | 57934758 | 57931047 | ID=Msa0820530;Name=Msa0820530 |
| chr5_3 | mRNA | 57931047 | 57934758 | 57931047 | ID=Msa0820530-mRNA-1;Parent=Msa0820530;Name=Msa0820530-mRNA-1;_AED=0.04;_eAED=0.04;_QI=199|1|1|1|0.66|0.5|4|284|224 |
| chr5_3 | exon | 57931047 | 57931393 | 57931047 | ID=Msa0820530-mRNA-1:exon:17554;Parent=Msa0820530-mRNA-1 |
| chr5_3 | exon | 57932866 | 57933193 | 57932866 | ID=Msa0820530-mRNA-1:exon:17555;Parent=Msa0820530-mRNA-1 |
| chr5_3 | exon | 57934172 | 57934594 | 57934172 | ID=Msa0820530-mRNA-1:exon:17556;Parent=Msa0820530-mRNA-1 |
| chr5_3 | exon | 57934699 | 57934758 | 57934699 | ID=Msa0820530-mRNA-1:exon:17557;Parent=Msa0820530-mRNA-1 |
| chr5_3 | five_prime_UTR | 57931047 | 57931245 | 57931047 | ID=Msa0820530-mRNA-1:five_prime_utr;Parent=Msa0820530-mRNA-1 |
| chr5_3 | CDS | 57931246 | 57931393 | 57931246 | ID=Msa0820530-mRNA-1:cds;Parent=Msa0820530-mRNA-1 |
| chr5_3 | CDS | 57932866 | 57933193 | 57932866 | ID=Msa0820530-mRNA-1:cds;Parent=Msa0820530-mRNA-1 |
| chr5_3 | CDS | 57934172 | 57934370 | 57934172 | ID=Msa0820530-mRNA-1:cds;Parent=Msa0820530-mRNA-1 |
| chr5_3 | three_prime_UTR | 57934371 | 57934594 | 57934371 | ID=Msa0820530-mRNA-1:three_prime_utr;Parent=Msa0820530-mRNA-1 |
| chr5_3 | three_prime_UTR | 57934699 | 57934758 | 57934699 | ID=Msa0820530-mRNA-1:three_prime_utr;Parent=Msa0820530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
