AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0429050

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0429050 MtrunA17_Chr3g0132811 91.292 356 25 2 1 350 331 686 0.0 666
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0429050 AT4G24490.1 47.414 348 166 10 9 349 337 674 1.18e-85 272
Msa0429050 AT4G24490.2 47.414 348 166 10 9 349 337 674 1.18e-85 272
Msa0429050 AT5G41820.2 40.563 355 178 12 7 350 353 685 6.29e-60 204
Msa0429050 AT5G41820.1 40.563 355 178 12 7 350 353 685 6.29e-60 204

Find 218 sgRNAs with CRISPR-Local

Find 849 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACACACTTCAAAAGTAATT+TGG 0.107140 3_2:+80247018 None:intergenic
TTGCACCTTCATTGCAAATT+TGG 0.129365 3_2:+80244669 None:intergenic
GGATGTCAATATTGAAAATT+TGG 0.156516 3_2:+80234999 None:intergenic
TCTTCAAATGGATATCATTA+TGG 0.162505 3_2:-80247050 Msa0429050:CDS
ATGATAAGTCTTATGTTAAA+AGG 0.182142 3_2:-80244595 Msa0429050:three_prime_UTR
CATGTCATTTCGGTGTTTCT+TGG 0.193148 3_2:+80244365 None:intergenic
TAGTGACCTTGGTTTGTTTA+TGG 0.194176 3_2:-80244899 Msa0429050:three_prime_UTR
TGTTATATAAATGTAATAAA+AGG 0.199789 3_2:+80234612 None:intergenic
ATGCTAAATTAAAAGACTTA+TGG 0.203330 3_2:+80234082 None:intergenic
AAGAGATACACCTTGAAATT+TGG 0.203719 3_2:-80235239 Msa0429050:three_prime_UTR
AAGAGGCTAAAAGTAGAAAT+TGG 0.213214 3_2:+80235473 None:intergenic
TGAAGTTAAGTTGTGTTAAA+AGG 0.215925 3_2:+80234343 None:intergenic
GCTATTTACAGATTTATTAT+AGG 0.224039 3_2:+80234793 None:intergenic
AGATACGAAGCGGCGTCTTT+TGG 0.244593 3_2:-80233632 Msa0429050:three_prime_UTR
GTTATAGTGCCACTAAGTTT+TGG 0.255391 3_2:-80245057 Msa0429050:CDS
GATACATAATTTAGTGTTGA+TGG 0.263929 3_2:+80244731 None:intergenic
TCACTCATTGTTTAAGATAA+AGG 0.264779 3_2:-80244846 Msa0429050:three_prime_UTR
TTCTGTAACTGTTTAACTTT+TGG 0.270128 3_2:-80244819 Msa0429050:three_prime_UTR
TCCATGCCACAATCGTAATT+AGG 0.270903 3_2:+80234831 None:intergenic
CCCTAGTGTTGGTTTCTACT+TGG 0.278297 3_2:+80244494 None:intergenic
AATATTGACATCCAAGTTAC+TGG 0.286000 3_2:-80234989 Msa0429050:three_prime_UTR
TAGTGATGTATAACAAATTA+TGG 0.290086 3_2:-80244530 Msa0429050:three_prime_UTR
GAAATATTTATTCTTCCTTC+TGG 0.293997 3_2:+80234211 None:intergenic
GAGCAGTCTTGAACTTCTAT+TGG 0.306329 3_2:+80244301 None:intergenic
CACCAAGCTTTCGCGTTCTT+CGG 0.307624 3_2:-80233866 Msa0429050:three_prime_UTR
TTGACTGATTTGAACATATC+AGG 0.309395 3_2:-80245004 Msa0429050:CDS
GGAAGCAAAGAAAGCTTATA+AGG 0.314616 3_2:+80233928 Msa0429060:CDS
CACTCGTGGGTTTGTATTAG+TGG 0.321194 3_2:+80235857 None:intergenic
TGCTAAATTAAAAGACTTAT+GGG 0.329872 3_2:+80234083 None:intergenic
CTTCAAATGGATATCATTAT+GGG 0.330697 3_2:-80247049 Msa0429050:CDS
AATTGGAAGTTGTTGGAATA+TGG 0.336661 3_2:+80246874 None:intergenic
TGAACCCCACAATCTGGTTT+TGG 0.346208 3_2:+80234893 None:intergenic
GTGTTATGAAGGGAAGAAAA+TGG 0.346267 3_2:+80233901 Msa0429060:CDS
CGGTGTTTCTTGGCTTTGGC+AGG 0.347122 3_2:+80244375 None:intergenic
ATACAATGCTTAAACTGTTT+AGG 0.352107 3_2:-80235723 Msa0429050:three_prime_UTR
AACTATTGACCAACAATTCA+TGG 0.359806 3_2:+80244123 None:intergenic
ACACACTTCAAAAGTAATTT+GGG 0.361270 3_2:+80247019 None:intergenic
TTCGTTTGCGAGGTTGTTGA+TGG 0.363091 3_2:-80233573 Msa0429050:three_prime_UTR
ATTTCGGTGTTTCTTGGCTT+TGG 0.368482 3_2:+80244371 None:intergenic
TTATAATTTGCCAAATTTCA+AGG 0.381331 3_2:+80235229 None:intergenic
GCTATGGCACCATGTCATTT+CGG 0.393391 3_2:+80244355 None:intergenic
TCTTTATAGTAGTGGCAATA+TGG 0.395093 3_2:+80245771 None:intergenic
GAAGATATACTTTATGAAGA+TGG 0.403250 3_2:-80244870 Msa0429050:three_prime_UTR
GCTTCTCCTTCTATTATCAA+TGG 0.406937 3_2:+80235192 None:intergenic
GTCATGTTAACCGGTGCCTC+CGG 0.407202 3_2:+80235439 None:intergenic
AATGTCCGGGGCACTGGTTA+AGG 0.409664 3_2:-80235581 Msa0429050:three_prime_UTR
CTTTACCAAATTTGCAATGA+AGG 0.413126 3_2:-80244674 Msa0429050:three_prime_UTR
ATGCACCAATTGGAAGTTGT+TGG 0.414123 3_2:+80246867 None:intergenic
TTTCCACGTTGCCCGTCAAC+AGG 0.415381 3_2:+80246975 None:intergenic
AGCAGTCTTGAACTTCTATT+GGG 0.415624 3_2:+80244302 None:intergenic
TAGGCGTTAATAAATGATTC+TGG 0.415690 3_2:+80234113 None:intergenic
TGCCTGTAGAAGCACTTAAC+AGG 0.416791 3_2:+80233981 Msa0429060:CDS
AATCTATCATTGTCACGAAT+GGG 0.417993 3_2:-80245705 Msa0429050:CDS
AAACAAAAGTGTGAAAATCT+AGG 0.418557 3_2:-80235069 Msa0429050:three_prime_UTR
AATTGGCCATTGATAATAGA+AGG 0.423154 3_2:-80235198 Msa0429050:three_prime_UTR
ATGACGTGGTTGTGAATTCA+TGG 0.431259 3_2:+80235322 None:intergenic
AATTGCCTCCATGCACCAAT+TGG 0.435270 3_2:+80246857 None:intergenic
GAGGTTGTTGATGGCGGATC+TGG 0.441588 3_2:-80233564 Msa0429050:three_prime_UTR
GATCACCGTTGGACATTCTA+CGG 0.445219 3_2:-80247081 Msa0429050:CDS
GTCCGAAGAACGCGAAAGCT+TGG 0.448178 3_2:+80233864 Msa0429060:CDS
GTTATATAAATGTAATAAAA+GGG 0.449070 3_2:+80234613 None:intergenic
GCGAAAGCTTGGTGTGCGTT+GGG 0.450050 3_2:+80233875 Msa0429060:CDS
CACATACTGAAGTATTTGCC+TGG 0.450894 3_2:-80245105 Msa0429050:CDS
GAAAGCTTCCCAAAACTTAG+TGG 0.451020 3_2:+80245048 None:intergenic
CGCGAAAGCTTGGTGTGCGT+TGG 0.456259 3_2:+80233874 Msa0429060:CDS
AGCGTGGCGGCTGCCGTCTA+AGG 0.458110 3_2:+80233179 None:intergenic
CTTCATTGCAAATTTGGTAA+AGG 0.458553 3_2:+80244675 None:intergenic
TTAACCAATGTCCGGGGCAC+TGG 0.459659 3_2:-80235587 Msa0429050:three_prime_UTR
AAATGTTGGAACCAGTAACT+TGG 0.460265 3_2:+80234978 None:intergenic
TTATAAGGAAGCTCATGAAT+TGG 0.465517 3_2:+80233943 Msa0429060:CDS
TTCACCTTGCTCAAGCGAAC+CGG 0.466250 3_2:-80233738 Msa0429050:three_prime_UTR
TATCATGAAGAGCAAAGTTT+CGG 0.467058 3_2:+80234169 None:intergenic
GTAAAGCTTGAGAACTTCTT+CGG 0.467812 3_2:+80246619 None:intergenic
TAATCACATGTATCGGTGTC+AGG 0.468161 3_2:+80234467 None:intergenic
GAAAGGTGTTTCATTAGCTA+TGG 0.469154 3_2:+80244339 None:intergenic
AATATTTCTTGCAATGAGCT+AGG 0.472390 3_2:-80245175 Msa0429050:CDS
GTAGAAGCACTTAACAGGTT+GGG 0.475754 3_2:+80233986 Msa0429060:CDS
GAGAAATGTTAACCAATGTC+CGG 0.476124 3_2:-80235595 Msa0429050:three_prime_UTR
ACTACGTGAACCCCACAATC+TGG 0.478016 3_2:+80234887 None:intergenic
GCTATGATTCTCGATCTTCA+AGG 0.478244 3_2:+80233662 Msa0429060:CDS
AATGAACTTCGATCAATTGA+AGG 0.480415 3_2:-80245636 Msa0429050:intron
ATATTCCAACAACTTCCAAT+TGG 0.483856 3_2:-80246872 Msa0429050:CDS
CTCCGGGACATTGTTTAAAG+AGG 0.486075 3_2:+80235456 None:intergenic
TGATAAGTCTTATGTTAAAA+GGG 0.488415 3_2:-80244594 Msa0429050:three_prime_UTR
AACGTGGAAAGTTGACTTCA+TGG 0.490403 3_2:-80246962 Msa0429050:CDS
ATCGAAGTTCATTGTGGCTA+AGG 0.491541 3_2:+80245646 None:intergenic
ACCGTGATGCCATGAATTGT+TGG 0.491932 3_2:-80244132 Msa0429050:three_prime_UTR
TATTGATACTATGATTGCTC+TGG 0.492519 3_2:-80244771 Msa0429050:three_prime_UTR
AAATTCAACTTGACCTTAGA+CGG 0.494785 3_2:-80233192 Msa0429050:three_prime_UTR
AGCCTCTTTAAACAATGTCC+CGG 0.495010 3_2:-80235458 Msa0429050:three_prime_UTR
AGGAGTGAGATTTGAACAAA+GGG 0.495443 3_2:+80244695 None:intergenic
AAATCTATCATTGTCACGAA+TGG 0.496579 3_2:-80245706 Msa0429050:CDS
AATGTGGCGGCGCTTTGTTA+AGG 0.496636 3_2:+80244410 None:intergenic
TTCCGATGAGAAATTTCCTC+CGG 0.500869 3_2:-80233324 Msa0429050:three_prime_UTR
CAATTCATGGCATCACGGTA+TGG 0.503011 3_2:+80244136 None:intergenic
AGGACTACGAATTATTCAAA+AGG 0.507503 3_2:+80234851 None:intergenic
ACTCGTGGGTTTGTATTAGT+GGG 0.508279 3_2:+80235858 None:intergenic
TTACACCGAGCTGATGAAGT+TGG 0.509117 3_2:-80246600 Msa0429050:CDS
GTCATGAAATTGCAAGTGAA+AGG 0.509191 3_2:-80235304 Msa0429050:three_prime_UTR
ATGAAGAGTTATAGTGACCT+TGG 0.509294 3_2:-80244910 Msa0429050:exon
TTAACCAGTGCCCCGGACAT+TGG 0.509319 3_2:+80235583 None:intergenic
AACGGTGATCTCTATAGAAT+AGG 0.511032 3_2:+80247094 None:intergenic
CGTAGTCCTAATTACGATTG+TGG 0.514062 3_2:-80234837 Msa0429050:three_prime_UTR
AATCTGAGTCATAATAAACT+TGG 0.514137 3_2:-80245250 Msa0429050:CDS
ACGAGTTGACTCGGCGTTAG+CGG 0.514403 3_2:+80233817 Msa0429060:CDS
AAACAATGTCCCGGAGGCAC+CGG 0.515267 3_2:-80235449 Msa0429050:three_prime_UTR
AATGCTTAAACTGTTTAGGT+AGG 0.515957 3_2:-80235719 Msa0429050:three_prime_UTR
CTGATGCGTCTTTATAGTAG+TGG 0.518229 3_2:+80245763 None:intergenic
TCATGTTAACCGGTGCCTCC+GGG 0.518925 3_2:+80235440 None:intergenic
AAGGATTTCAAAACGGTCCC+AGG 0.521246 3_2:+80245087 None:intergenic
CGCCTAAGGCTTCGTTTGCG+AGG 0.524088 3_2:-80233583 Msa0429050:three_prime_UTR
CAAAACCAAAACCAGATTGT+GGG 0.525403 3_2:-80234898 Msa0429050:three_prime_UTR
CAGCAATGTAACAAAAGATA+CGG 0.526619 3_2:+80244279 None:intergenic
AATAAAACGAGAGGAACATC+AGG 0.528821 3_2:+80234316 None:intergenic
AGAAATGTTAACCAATGTCC+GGG 0.529495 3_2:-80235594 Msa0429050:three_prime_UTR
AGTTAAGTTGTGTTAAAAGG+AGG 0.529890 3_2:+80234346 None:intergenic
AAAATAGACAAATTCAAACT+TGG 0.530082 3_2:-80235024 Msa0429050:three_prime_UTR
AATACTTCAGTATGTGCTAA+AGG 0.531773 3_2:+80245112 None:intergenic
CTCATACAGAACCTGTTGAC+GGG 0.537445 3_2:-80246986 Msa0429050:CDS
TCATGAAATTGCAAGTGAAA+GGG 0.539814 3_2:-80235303 Msa0429050:three_prime_UTR
ATGCTTAAACTGTTTAGGTA+GGG 0.541417 3_2:-80235718 Msa0429050:three_prime_UTR
TTGGTCGTTGTTGACATCAC+AGG 0.542052 3_2:-80244800 Msa0429050:three_prime_UTR
AAATTTGTGTACCCTAGTGT+TGG 0.542240 3_2:+80244483 None:intergenic
CTACAAGGATGAGCACAGTC+TGG 0.544150 3_2:-80246558 Msa0429050:CDS
CAGTCTGGTATTACTTCGGC+AGG 0.545028 3_2:-80246543 Msa0429050:intron
ATTCAAAAGGTGAGTTAGTG+TGG 0.546935 3_2:+80234864 None:intergenic
GCATAGACACGTTTGATCAA+AGG 0.547268 3_2:-80234515 Msa0429050:three_prime_UTR
GTGAAAATCTAGGCATGTAG+TGG 0.549202 3_2:-80235059 Msa0429050:three_prime_UTR
TCATTTAAGCACTTCAGAGT+AGG 0.549730 3_2:+80244932 None:intergenic
GTGCTAAAGGCGAAGAGCAT+AGG 0.549796 3_2:+80245125 None:intergenic
TGTAGAAGCACTTAACAGGT+TGG 0.551808 3_2:+80233985 Msa0429060:CDS
ATACTAGTTATGTGTGTCTA+CGG 0.552144 3_2:-80245734 Msa0429050:CDS
AAGGAGTGAGATTTGAACAA+AGG 0.552451 3_2:+80244694 None:intergenic
CAAGTGAAGGAACAAAGTAA+AGG 0.552470 3_2:-80235403 Msa0429050:three_prime_UTR
TTAATCTTCCTCAGCATGCA+CGG 0.553368 3_2:+80233422 Msa0429060:CDS
TAAACAAGATAGAAGTTGCA+TGG 0.554228 3_2:+80245273 None:intergenic
TTGAACGTAATCACATGTAT+CGG 0.555786 3_2:+80234460 None:intergenic
GCGTTGTCTCCTCTCGCCGC+CGG 0.558332 3_2:+80233719 Msa0429060:CDS
GCGTTGGGAGAGTGTTATGA+AGG 0.558916 3_2:+80233890 Msa0429060:CDS
AGCGAAAAGACATGAGGTTG+AGG 0.559935 3_2:-80235910 Msa0429050:three_prime_UTR
AACAACTTCCAATTGGTGCA+TGG 0.563161 3_2:-80246865 Msa0429050:CDS
GCTCATACAGAACCTGTTGA+CGG 0.564601 3_2:-80246987 Msa0429050:CDS
AAGACTTATGGGTCAAGAGT+AGG 0.565195 3_2:+80234094 None:intergenic
TGTGGCATGGAAAATTGAAA+AGG 0.565508 3_2:-80234819 Msa0429050:three_prime_UTR
TGAACGCGGACGAGTTGACT+CGG 0.566518 3_2:+80233808 Msa0429060:CDS
CAAGCGATGTACCGCGACAT+CGG 0.569247 3_2:+80233368 Msa0429060:CDS
TGCCACAAAGGATTTCAAAA+CGG 0.571179 3_2:+80245080 None:intergenic
CGTTTCTTTCTTAATCCAGA+AGG 0.574416 3_2:-80234226 Msa0429050:three_prime_UTR
TGAAGGGAAGAAAATGGATG+AGG 0.575977 3_2:+80233907 Msa0429060:CDS
TGTTTCCTTAACCAGTGCCC+CGG 0.578971 3_2:+80235576 None:intergenic
AACCTGTTAAGTGCTTCTAC+AGG 0.580757 3_2:-80233983 Msa0429050:three_prime_UTR
AAGTTAGTATCAGAGACAAT+CGG 0.581126 3_2:-80244238 Msa0429050:three_prime_UTR
CTATTGGGAAGAATGTATGT+TGG 0.585370 3_2:+80244317 None:intergenic
TCACTTGCAATTTCATGACG+TGG 0.592165 3_2:+80235308 None:intergenic
GGGAAGAATGTATGTTGGAA+AGG 0.594020 3_2:+80244322 None:intergenic
CCAAAAGAGAAAACAAGTGA+AGG 0.595094 3_2:-80235416 Msa0429050:three_prime_UTR
ATCACCGTTGGACATTCTAC+GGG 0.595563 3_2:-80247080 Msa0429050:CDS
GCCGCCGGTTCGCTTGAGCA+AGG 0.596105 3_2:+80233734 Msa0429060:CDS
TTTGGAATCGGAGTTTAGCG+AGG 0.596238 3_2:-80233460 Msa0429050:three_prime_UTR
TCAAGACAGCAAAAGTTGCA+CGG 0.600051 3_2:-80235262 Msa0429050:three_prime_UTR
AGCACAGTCTGGTATTACTT+CGG 0.602433 3_2:-80246547 Msa0429050:CDS
GTTTGCGAGGTTGTTGATGG+CGG 0.604157 3_2:-80233570 Msa0429050:three_prime_UTR
TGGATCCAACTTCATCAGCT+CGG 0.609055 3_2:+80246595 None:intergenic
TCAAGCGAACCGGCGGCGAG+AGG 0.609088 3_2:-80233728 Msa0429050:three_prime_UTR
ACATACTGAAGTATTTGCCT+GGG 0.609573 3_2:-80245104 Msa0429050:CDS
CCAAAACCAAAACCAGATTG+TGG 0.610708 3_2:-80234899 Msa0429050:three_prime_UTR
ATCTATCATTGTCACGAATG+GGG 0.611320 3_2:-80245704 Msa0429050:CDS
TTTATACCATAAACAAACCA+AGG 0.611364 3_2:+80244893 None:intergenic
TCCTAATTACGATTGTGGCA+TGG 0.613293 3_2:-80234832 Msa0429050:three_prime_UTR
ACTTCAAAAGTAATTTGGGA+AGG 0.614137 3_2:+80247023 None:intergenic
CAATTGATCGAAGTTCATTG+TGG 0.616533 3_2:+80245640 None:intergenic
CAAGAAACACCGAAATGACA+TGG 0.618215 3_2:-80244364 Msa0429050:three_prime_UTR
ACCAAGTAGAAACCAACACT+AGG 0.619181 3_2:-80244495 Msa0429050:three_prime_UTR
CACCGGAGGAAATTTCTCAT+CGG 0.620832 3_2:+80233322 None:intergenic
TGGAAAGTTGACTTCATGGA+AGG 0.621972 3_2:-80246958 Msa0429050:CDS
ACCTTGCTCAAGCGAACCGG+CGG 0.627328 3_2:-80233735 Msa0429050:three_prime_UTR
TATTCTATAGAGATCACCGT+TGG 0.629388 3_2:-80247092 Msa0429050:CDS
ACCAACAATTCATGGCATCA+CGG 0.630431 3_2:+80244131 None:intergenic
AACACATTCTCTATACTACA+AGG 0.631342 3_2:-80246573 Msa0429050:CDS
CCAAGTAGAAACCAACACTA+GGG 0.636091 3_2:-80244494 Msa0429050:three_prime_UTR
AGTCATCATGATCCTCGCAA+TGG 0.640456 3_2:+80233397 Msa0429060:CDS
TTCAAATGGATATCATTATG+GGG 0.641853 3_2:-80247048 Msa0429050:CDS
GCAAAGCGTCACTTCGTACG+TGG 0.647924 3_2:+80233500 Msa0429060:CDS
TTGTAGTATAGAGAATGTGT+TGG 0.648966 3_2:+80246575 None:intergenic
TCGCTTGAGCAAGGTGAACG+TGG 0.649304 3_2:+80233743 Msa0429060:CDS
GATGTAAGAAGCAAATGTGG+CGG 0.650810 3_2:+80244397 None:intergenic
CGTTGGGAGAGTGTTATGAA+GGG 0.659064 3_2:+80233891 Msa0429060:CDS
TGGCACTATAACTGCCACAA+AGG 0.659141 3_2:+80245068 None:intergenic
GTGGAATTCCGTGCATGCTG+AGG 0.659142 3_2:-80233430 Msa0429050:three_prime_UTR
AAAAGCGATTAAAGCAAACA+TGG 0.660981 3_2:-80234540 Msa0429050:three_prime_UTR
AACCTCGCAAACGAAGCCTT+AGG 0.661102 3_2:+80233581 Msa0429060:CDS
CAGGATGTAAGAAGCAAATG+TGG 0.661856 3_2:+80244394 None:intergenic
CGTTGTTGACATCACAGGTG+TGG 0.664239 3_2:-80244795 Msa0429050:three_prime_UTR
AAAACCAAAACCAGATTGTG+GGG 0.666019 3_2:-80234897 Msa0429050:three_prime_UTR
GTTGTGAATTCATGGAAGCA+TGG 0.667645 3_2:+80235330 None:intergenic
GTTAGCGGATTTGACTGAGT+CGG 0.668658 3_2:+80233832 Msa0429060:CDS
AGCTTTGAGAAGATACGAAG+CGG 0.671113 3_2:-80233642 Msa0429050:three_prime_UTR
CCAACTGAAAATAAAACGAG+AGG 0.673223 3_2:+80234307 None:intergenic
AAATCTAACACCCTCACCGG+AGG 0.681037 3_2:+80233308 None:intergenic
AAACTCGCAACGAGTGAACG+CGG 0.681953 3_2:+80233794 Msa0429060:CDS
CTCTTTAAACAATGTCCCGG+AGG 0.682580 3_2:-80235455 Msa0429050:three_prime_UTR
AACTTCCAATTGGTGCATGG+AGG 0.682685 3_2:-80246862 Msa0429050:CDS
TATACAAGCGAAAAGACATG+AGG 0.696678 3_2:-80235916 Msa0429050:three_prime_UTR
AGTGCTAAATTAGACAGACG+TGG 0.698076 3_2:-80235107 Msa0429050:three_prime_UTR
AATACCCGTAGAATGTCCAA+CGG 0.701251 3_2:+80247076 None:intergenic
AAACAAAATGATAAGCGTGG+CGG 0.702036 3_2:+80233166 None:intergenic
GGAAGATTAAAGCCATTGCG+AGG 0.704504 3_2:-80233409 Msa0429050:three_prime_UTR
GAACCTGTTGACGGGCAACG+TGG 0.708889 3_2:-80246978 Msa0429050:CDS
ATGGTGATTAGTAGATACAG+CGG 0.715834 3_2:+80246893 None:intergenic
TGACTTGTAAACCGATGTCG+CGG 0.717200 3_2:-80233379 Msa0429050:three_prime_UTR
GGCGTCGAGTGATTCAAGAG+CGG 0.721407 3_2:-80233696 Msa0429050:three_prime_UTR
GAAATGTTAACCAATGTCCG+GGG 0.724259 3_2:-80235593 Msa0429050:three_prime_UTR
AGGAGAAGCAACATCCCATG+TGG 0.727208 3_2:-80235178 Msa0429050:three_prime_UTR
AGGTCACTGCTGTTAGACAG+CGG 0.729218 3_2:+80234487 None:intergenic
TCTACAGGCACAGAATACTG+TGG 0.738815 3_2:-80233968 Msa0429050:three_prime_UTR
TTAGTATCAGAGACAATCGG+TGG 0.744008 3_2:-80244235 Msa0429050:three_prime_UTR
AGCGACTCTAGCGATCTGAG+AGG 0.759932 3_2:+80245208 None:intergenic
GGCGGCGAGAGGAGACAACG+CGG 0.761382 3_2:-80233717 Msa0429050:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTTTTAATGAATTTTC+TGG - chr3_2:80233784-80233803 Msa0429050:three_prime_UTR 10.0%
!! TGAACAAATAAAATTATTTA+TGG + chr3_2:80234428-80234447 None:intergenic 10.0%
!!! AATTTTTTTATAGAGATTAA+AGG + chr3_2:80236344-80236363 None:intergenic 10.0%
!! GTTATATAAATGTAATAAAA+GGG + chr3_2:80237504-80237523 None:intergenic 10.0%
!! TGTTATATAAATGTAATAAA+AGG + chr3_2:80237505-80237524 None:intergenic 10.0%
!! CATTAAAATAAAAATTAAAC+TGG + chr3_2:80239047-80239066 None:intergenic 10.0%
!!! AACAATAATATCTATTTTTA+TGG + chr3_2:80239428-80239447 None:intergenic 10.0%
!! TAAAAATAGATATTATTGTT+AGG - chr3_2:80239428-80239447 Msa0429050:intron 10.0%
!! GATTTAAACTATAATAATAT+AGG - chr3_2:80240564-80240583 Msa0429050:intron 10.0%
!!! AAACACATTTTTTTTAATAT+TGG + chr3_2:80240806-80240825 None:intergenic 10.0%
!!! TATTTTTTATATTCAATACT+TGG - chr3_2:80241545-80241564 Msa0429050:intron 10.0%
!!! TTAATTTTGTTTTTATAAGA+AGG - chr3_2:80242141-80242160 Msa0429050:intron 10.0%
!! AAAATATTTATATACAATGT+AGG + chr3_2:80242223-80242242 None:intergenic 10.0%
!! AAATAAAATATAAACAATGT+TGG + chr3_2:80243735-80243754 None:intergenic 10.0%
!!! TTTTTTTTTTTATGAACTTT+GGG + chr3_2:80244468-80244487 None:intergenic 10.0%
!!! AATTTTTTTTTAGAGATTAA+AGG + chr3_2:80244491-80244510 None:intergenic 10.0%
!! GTTATATAAATGTAATAAAA+GGG + chr3_2:80237504-80237523 None:intergenic 10.0%
!! TGTTATATAAATGTAATAAA+AGG + chr3_2:80237505-80237524 None:intergenic 10.0%
!!! ATTTTTTCTTTTATCATGTT+GGG + chr3_2:80233622-80233641 Msa0429060:CDS 15.0%
!! ACAAATAAAATTATTTATGG+TGG + chr3_2:80234425-80234444 None:intergenic 15.0%
!!! TTTTTTTTTTCATGAACTTT+GGG + chr3_2:80236320-80236339 None:intergenic 15.0%
!!! TTTTTTTTTTTCATGAACTT+TGG + chr3_2:80236321-80236340 None:intergenic 15.0%
!!! ATTTTTATTTTAATGCAAAC+TGG - chr3_2:80239052-80239071 Msa0429050:intron 15.0%
!! ACTAATTCTTTAAATTGAAT+AGG - chr3_2:80239099-80239118 Msa0429050:intron 15.0%
!! TCAACAAAATTATTGATAAA+AGG - chr3_2:80239273-80239292 Msa0429050:intron 15.0%
!!! TTTGTTTTCTCAAATATAAT+AGG - chr3_2:80239354-80239373 Msa0429050:intron 15.0%
!! TAAAAAACCCTAAAAAAATT+CGG + chr3_2:80240186-80240205 None:intergenic 15.0%
!!! AAAAAAACTTATTTTTTTGC+AGG + chr3_2:80240260-80240279 None:intergenic 15.0%
!! TAAACTATAATAATATAGGA+AGG - chr3_2:80240568-80240587 Msa0429050:intron 15.0%
!! AAAACTATAATAATATAGGA+AGG - chr3_2:80240622-80240641 Msa0429050:intron 15.0%
!!! ATGTTATTTTTAATGAATAG+TGG - chr3_2:80241141-80241160 Msa0429050:intron 15.0%
!!! TATCAATTTTTTTGATGATA+GGG + chr3_2:80241849-80241868 Msa0429070:CDS 15.0%
!!! ATATCAATTTTTTTGATGAT+AGG + chr3_2:80241850-80241869 Msa0429070:CDS 15.0%
!!! TAACAATAATTTTCAACTAA+GGG + chr3_2:80241878-80241897 Msa0429070:CDS 15.0%
!!! ATAACAATAATTTTCAACTA+AGG + chr3_2:80241879-80241898 Msa0429070:CDS 15.0%
!! AAAATTAAATTAAAATGGCA+TGG + chr3_2:80242129-80242148 Msa0429070:CDS 15.0%
!!! GTTTTTAAATTTAAGAAATG+TGG - chr3_2:80242630-80242649 Msa0429050:intron 15.0%
!! AAAAGTTAGACAAAAAAAAT+TGG - chr3_2:80242689-80242708 Msa0429050:intron 15.0%
!! CAAAAAAAATTGGAAAAAAA+TGG - chr3_2:80242699-80242718 Msa0429050:intron 15.0%
!!! TGTATAAATAGTTTTTAACT+AGG - chr3_2:80242931-80242950 Msa0429050:intron 15.0%
!!! GTATAAATAGTTTTTAACTA+GGG - chr3_2:80242932-80242951 Msa0429050:intron 15.0%
!!! TATAAATAGTTTTTAACTAG+GGG - chr3_2:80242933-80242952 Msa0429050:intron 15.0%
!! TGAAATTTGTATATAATAGA+AGG - chr3_2:80243272-80243291 Msa0429050:intron 15.0%
!! GAAATTTGTATATAATAGAA+GGG - chr3_2:80243273-80243292 Msa0429050:intron 15.0%
!!! ATAATGAAAAATTGTTTTGA+AGG + chr3_2:80243443-80243462 None:intergenic 15.0%
!!! TTCAAAACAATTTTTCATTA+TGG - chr3_2:80243442-80243461 Msa0429050:intron 15.0%
!!! GTTTTTTTTTTTATGAACTT+TGG + chr3_2:80244469-80244488 None:intergenic 15.0%
!!! CTTCAAAATGATCAATTTTT+CGG + chr3_2:80233343-80233362 None:intergenic 20.0%
!! GAAATATAACTGGAAAATAT+GGG + chr3_2:80233510-80233529 Msa0429060:CDS 20.0%
!! TGAAATATAACTGGAAAATA+TGG + chr3_2:80233511-80233530 Msa0429060:CDS 20.0%
!!! TTTTTTCTTTTATCATGTTG+GGG + chr3_2:80233621-80233640 Msa0429060:CDS 20.0%
!!! GATTTTTTCTTTTATCATGT+TGG + chr3_2:80233623-80233642 Msa0429060:CDS 20.0%
!! TTTACCAAAAAATTAGATGA+TGG - chr3_2:80234060-80234079 Msa0429050:three_prime_UTR 20.0%
!!! GAGAATATTTTTGAGTTAAT+GGG - chr3_2:80234082-80234101 Msa0429050:three_prime_UTR 20.0%
!!! ATAAAATTATTTATGGTGGA+AGG + chr3_2:80234421-80234440 None:intergenic 20.0%
!!! TTTTATTTGTTCATGTTATG+AGG - chr3_2:80234435-80234454 Msa0429050:three_prime_UTR 20.0%
!! ATAATAACGCTAAATTATAG+TGG + chr3_2:80234712-80234731 None:intergenic 20.0%
!! TAATTTAGCGTTATTATTAC+TGG - chr3_2:80234715-80234734 Msa0429050:three_prime_UTR 20.0%
!! AATTTAGCGTTATTATTACT+GGG - chr3_2:80234716-80234735 Msa0429050:three_prime_UTR 20.0%
!! AATGAGAATATTGATGTTAA+TGG - chr3_2:80234825-80234844 Msa0429050:three_prime_UTR 20.0%
!!! ATGATAAGTCTTATGTTAAA+AGG - chr3_2:80235670-80235689 Msa0429050:three_prime_UTR 20.0%
!!! TGATAAGTCTTATGTTAAAA+GGG - chr3_2:80235671-80235690 Msa0429050:three_prime_UTR 20.0%
!! TAGTGATGTATAACAAATTA+TGG - chr3_2:80235735-80235754 Msa0429050:three_prime_UTR 20.0%
!!! TTTTTTTCATCAACAACAAT+AGG + chr3_2:80236063-80236082 None:intergenic 20.0%
!!! TTATAATTTGCCAAATTTCA+AGG + chr3_2:80236888-80236907 None:intergenic 20.0%
!!! TTTTTGAAAGAGAATATTAC+TGG - chr3_2:80236968-80236987 Msa0429050:intron 20.0%
!! AAAATAGACAAATTCAAACT+TGG - chr3_2:80237090-80237109 Msa0429050:intron 20.0%
!! GCTATTTACAGATTTATTAT+AGG + chr3_2:80237324-80237343 None:intergenic 20.0%
!!! ACGTGTTAATTTTATAAATG+TGG - chr3_2:80237464-80237483 Msa0429050:intron 20.0%
!!! CGTGTTAATTTTATAAATGT+GGG - chr3_2:80237465-80237484 Msa0429050:intron 20.0%
!!! TTTTTCTAGAAGAAATTGAT+AGG - chr3_2:80239013-80239032 Msa0429050:intron 20.0%
!! ACAAAATTATTGATAAAAGG+AGG - chr3_2:80239276-80239295 Msa0429050:intron 20.0%
!! TAGAATTGACAAAATGATTT+AGG + chr3_2:80239906-80239925 None:intergenic 20.0%
!! AAAAAACCCTAAAAAAATTC+GGG + chr3_2:80240185-80240204 None:intergenic 20.0%
!!! TGTAATTTTTTGTCAAAGTT+TGG - chr3_2:80240447-80240466 Msa0429050:intron 20.0%
!! TCAAAAAAAGTTTCAAATAC+TGG + chr3_2:80240494-80240513 None:intergenic 20.0%
!!! GTATTTGAAACTTTTTTTGA+AGG - chr3_2:80240494-80240513 Msa0429050:intron 20.0%
!!! AAAAAAAAAAAAGGTACATC+CGG - chr3_2:80240834-80240853 Msa0429050:intron 20.0%
!!! GTAATTAGGTTTGTTTTTTA+AGG - chr3_2:80241110-80241129 Msa0429050:intron 20.0%
!! CACTTATAAATTTATGTTTG+TGG + chr3_2:80241197-80241216 None:intergenic 20.0%
!! GTTGAAATAAATATAAGTGT+TGG + chr3_2:80241335-80241354 None:intergenic 20.0%
!! GTAATACTTGAATTACAAAA+AGG + chr3_2:80241723-80241742 Msa0429070:CDS 20.0%
!! TTGTAATTCAAGTATTACAA+AGG - chr3_2:80241725-80241744 Msa0429050:intron 20.0%
!!! ATCAATTTTTTTGATGATAG+GGG + chr3_2:80241848-80241867 Msa0429070:CDS 20.0%
!! CATGGTCAATTAAATTAAAA+AGG + chr3_2:80242080-80242099 Msa0429070:CDS 20.0%
!!! CCATTTTATATATAGAACAA+GGG + chr3_2:80242103-80242122 Msa0429070:CDS 20.0%
!!! TTAATGTTCTAAGTTTAGAA+TGG + chr3_2:80242733-80242752 None:intergenic 20.0%
!!! TGAATATTGATCCTTTTAAA+TGG + chr3_2:80243653-80243672 None:intergenic 20.0%
!! AAAATATAAACAATGTTGGT+CGG + chr3_2:80243731-80243750 None:intergenic 20.0%
!!! TGATATAATCACCATTTTAA+AGG - chr3_2:80244059-80244078 Msa0429050:intron 20.0%
!!! ATGATTTCAATCCTTTAAAA+TGG + chr3_2:80244073-80244092 None:intergenic 20.0%
!!! TTATAATTTGCCAAATTTCA+AGG + chr3_2:80236888-80236907 None:intergenic 20.0%
!!! TTTTTGAAAGAGAATATTAC+TGG - chr3_2:80236968-80236987 Msa0429050:intron 20.0%
!! AAAATAGACAAATTCAAACT+TGG - chr3_2:80237090-80237109 Msa0429050:intron 20.0%
!! GCTATTTACAGATTTATTAT+AGG + chr3_2:80237324-80237343 None:intergenic 20.0%
!!! ACGTGTTAATTTTATAAATG+TGG - chr3_2:80237464-80237483 Msa0429050:intron 20.0%
!!! CGTGTTAATTTTATAAATGT+GGG - chr3_2:80237465-80237484 Msa0429050:intron 20.0%
!! TGCTAAATTAAAAGACTTAT+GGG + chr3_2:80246185-80246204 None:intergenic 20.0%
!! ATGCTAAATTAAAAGACTTA+TGG + chr3_2:80246186-80246205 None:intergenic 20.0%
! TCTTCAAATGGATATCATTA+TGG - chr3_2:80233215-80233234 Msa0429050:three_prime_UTR 25.0%
! CTTCAAATGGATATCATTAT+GGG - chr3_2:80233216-80233235 Msa0429050:three_prime_UTR 25.0%
! TTCAAATGGATATCATTATG+GGG - chr3_2:80233217-80233236 Msa0429050:three_prime_UTR 25.0%
! ACACACTTCAAAAGTAATTT+GGG + chr3_2:80233249-80233268 None:intergenic 25.0%
! GCATCAAATTGAAATATAAC+TGG + chr3_2:80233520-80233539 Msa0429060:CDS 25.0%
!!! GATTTTCTGTGATTTTAATC+TGG - chr3_2:80233825-80233844 Msa0429050:three_prime_UTR 25.0%
! GAAAAAATGTGTTAACAAGT+TGG - chr3_2:80233899-80233918 Msa0429050:three_prime_UTR 25.0%
! CTAAGTCAAAGAATAAGATA+AGG - chr3_2:80233931-80233950 Msa0429050:three_prime_UTR 25.0%
! AAGATAAGGAATGAAAGAAA+TGG - chr3_2:80233945-80233964 Msa0429050:three_prime_UTR 25.0%
! AGAAAAGTTTATGCTGAAAT+AGG - chr3_2:80234014-80234033 Msa0429050:three_prime_UTR 25.0%
!!! TTCTCCATCATCTAATTTTT+TGG + chr3_2:80234067-80234086 None:intergenic 25.0%
!!! GGAGAATATTTTTGAGTTAA+TGG - chr3_2:80234081-80234100 Msa0429050:three_prime_UTR 25.0%
! CAATATTCTCATTAAAGCTT+GGG + chr3_2:80234818-80234837 None:intergenic 25.0%
! TCAATATTCTCATTAAAGCT+TGG + chr3_2:80234819-80234838 None:intergenic 25.0%
! AATCTGAGTCATAATAAACT+TGG - chr3_2:80235015-80235034 Msa0429050:three_prime_UTR 25.0%
! TTTATACCATAAACAAACCA+AGG + chr3_2:80235375-80235394 None:intergenic 25.0%
! GAAGATATACTTTATGAAGA+TGG - chr3_2:80235395-80235414 Msa0429050:three_prime_UTR 25.0%
!! TCACTCATTGTTTAAGATAA+AGG - chr3_2:80235419-80235438 Msa0429050:three_prime_UTR 25.0%
!!! TTCTGTAACTGTTTAACTTT+TGG - chr3_2:80235446-80235465 Msa0429050:three_prime_UTR 25.0%
!! GATACATAATTTAGTGTTGA+TGG + chr3_2:80235537-80235556 None:intergenic 25.0%
!!! GTGAAGACTTGTTTTAATTA+TGG - chr3_2:80236280-80236299 Msa0429050:intron 25.0%
! ATACAATGCTTAAACTGTTT+AGG - chr3_2:80236395-80236414 Msa0429050:intron 25.0%
!!! TTTAGCTTTTGATTCACAAA+TGG + chr3_2:80236496-80236515 None:intergenic 25.0%
!! AAACAAAAGTGTGAAAATCT+AGG - chr3_2:80237045-80237064 Msa0429050:intron 25.0%
! GGATGTCAATATTGAAAATT+TGG + chr3_2:80237118-80237137 None:intergenic 25.0%
! TGATCATCATCTAAAAATGT+TGG + chr3_2:80237153-80237172 None:intergenic 25.0%
!!! TGAACTCTATTTTCTTGTTT+TGG - chr3_2:80237351-80237370 Msa0429050:intron 25.0%
!! ATAACATTTTACCAAACGAA+AGG - chr3_2:80237519-80237538 Msa0429050:intron 25.0%
!! ATTTTTAATCTCCTTTCGTT+TGG + chr3_2:80237533-80237552 None:intergenic 25.0%
!!! AGGACATTTTTTGCTAAAAT+TGG + chr3_2:80237753-80237772 None:intergenic 25.0%
!! TGAAGTTAAGTTGTGTTAAA+AGG + chr3_2:80237776-80237795 None:intergenic 25.0%
! GAAATATTTATTCTTCCTTC+TGG + chr3_2:80237908-80237927 None:intergenic 25.0%
! AAATTTCTCATCGGAAAAAA+TGG + chr3_2:80238794-80238813 None:intergenic 25.0%
! TAAAAACAAAATGATAAGCG+TGG + chr3_2:80238945-80238964 None:intergenic 25.0%
!! AATTAGTCTATGTAGTTGAA+GGG + chr3_2:80239086-80239105 None:intergenic 25.0%
!!! AAGAATGATGTGCTATTTTT+GGG - chr3_2:80239572-80239591 Msa0429050:intron 25.0%
! AAATATATACACGTTGTTCA+AGG + chr3_2:80239794-80239813 None:intergenic 25.0%
!! TGAGAGAATTGATTTATGTT+TGG + chr3_2:80239938-80239957 None:intergenic 25.0%
!! TATCATCACAAGATTGTTTT+AGG - chr3_2:80240045-80240064 Msa0429050:intron 25.0%
!! ATGAATGAAAATTTTACCAG+AGG - chr3_2:80240688-80240707 Msa0429050:intron 25.0%
! AAGGACAAAAAAAAAACCTA+TGG - chr3_2:80240716-80240735 Msa0429050:intron 25.0%
! AGGACAAAAAAAAAACCTAT+GGG - chr3_2:80240717-80240736 Msa0429050:intron 25.0%
! AAAAAAAAAACCTATGGGAA+TGG - chr3_2:80240722-80240741 Msa0429050:intron 25.0%
! ACTATAAAAACCACTCAAAT+GGG - chr3_2:80240754-80240773 Msa0429050:intron 25.0%
!! AAAAAAAAAAAGGTACATCC+GGG - chr3_2:80240835-80240854 Msa0429050:intron 25.0%
!!! GCTAATTTTAATTGGTTGTT+GGG + chr3_2:80241175-80241194 None:intergenic 25.0%
!!! TGTTTGTGGCTAATTTTAAT+TGG + chr3_2:80241183-80241202 None:intergenic 25.0%
! ATTTGTGTGTCTAATTCTAA+TGG - chr3_2:80241257-80241276 Msa0429050:intron 25.0%
! TTCCTTCTACTTATCTAAAT+TGG - chr3_2:80241514-80241533 Msa0429050:intron 25.0%
! ATACTTGAATTACAAAAAGG+AGG + chr3_2:80241720-80241739 Msa0429070:CDS 25.0%
!!! TTTTAGATTTGTTGACATCA+AGG - chr3_2:80241766-80241785 Msa0429050:intron 25.0%
!! TTCTTGTTCCTTATTTCAAT+TGG - chr3_2:80242044-80242063 Msa0429050:intron 25.0%
! CCCTTGTTCTATATATAAAA+TGG - chr3_2:80242100-80242119 Msa0429050:intron 25.0%
!!! GCCATTTTATATATAGAACA+AGG + chr3_2:80242104-80242123 Msa0429070:CDS 25.0%
! CGAAATAAAATACATTACGA+AGG - chr3_2:80242367-80242386 Msa0429050:intron 25.0%
! TAACTATGATGATTAACAGT+TGG - chr3_2:80242394-80242413 Msa0429050:intron 25.0%
!! GAAAATAGTCCATATTTTCT+CGG - chr3_2:80242444-80242463 Msa0429050:intron 25.0%
! TATAAAACACCGAGAAAATA+TGG + chr3_2:80242456-80242475 None:intergenic 25.0%
!!! TCGAACAAAAAAGTCATTTT+AGG - chr3_2:80242603-80242622 Msa0429050:intron 25.0%
!!! TTTTTTTTCCTGTTCTTCAA+TGG + chr3_2:80242790-80242809 None:intergenic 25.0%
! ATACAAATTTCAAAAAGTCG+TGG + chr3_2:80243264-80243283 None:intergenic 25.0%
!! TATAATAGAAGGGAAAGTTT+TGG - chr3_2:80243283-80243302 Msa0429050:intron 25.0%
! TTTGAGTAGTTAACGTAATA+AGG - chr3_2:80243504-80243523 Msa0429050:intron 25.0%
! TTGAGTAGTTAACGTAATAA+GGG - chr3_2:80243505-80243524 Msa0429050:intron 25.0%
! CAAATGAAGATAAAAGATAC+TGG - chr3_2:80243796-80243815 Msa0429050:intron 25.0%
! TTGAAATTGTCATCAAGTTT+AGG - chr3_2:80243898-80243917 Msa0429050:intron 25.0%
! TGAAATTGTCATCAAGTTTA+GGG - chr3_2:80243899-80243918 Msa0429050:intron 25.0%
! ATATCATTGAAATTGTTGTC+AGG + chr3_2:80244045-80244064 None:intergenic 25.0%
! ATCATAACTCATTTGTTTGA+TGG - chr3_2:80244121-80244140 Msa0429050:intron 25.0%
!!! GTGAAGACTTGTTTTTATTA+TGG - chr3_2:80244428-80244447 Msa0429050:three_prime_UTR 25.0%
! ATACAATGCTTAAACTGTTT+AGG - chr3_2:80236395-80236414 Msa0429050:intron 25.0%
!!! TTTAGCTTTTGATTCACAAA+TGG + chr3_2:80236496-80236515 None:intergenic 25.0%
!! AAACAAAAGTGTGAAAATCT+AGG - chr3_2:80237045-80237064 Msa0429050:intron 25.0%
! GGATGTCAATATTGAAAATT+TGG + chr3_2:80237118-80237137 None:intergenic 25.0%
! TGATCATCATCTAAAAATGT+TGG + chr3_2:80237153-80237172 None:intergenic 25.0%
!!! TGAACTCTATTTTCTTGTTT+TGG - chr3_2:80237351-80237370 Msa0429050:intron 25.0%
!! ATAACATTTTACCAAACGAA+AGG - chr3_2:80237519-80237538 Msa0429050:intron 25.0%
!! ATTTTTAATCTCCTTTCGTT+TGG + chr3_2:80237533-80237552 None:intergenic 25.0%
!!! AGGACATTTTTTGCTAAAAT+TGG + chr3_2:80237753-80237772 None:intergenic 25.0%
!! TGAAGTTAAGTTGTGTTAAA+AGG + chr3_2:80237776-80237795 None:intergenic 25.0%
! GAAATATTTATTCTTCCTTC+TGG + chr3_2:80237908-80237927 None:intergenic 25.0%
! AAATTTCTCATCGGAAAAAA+TGG + chr3_2:80238794-80238813 None:intergenic 25.0%
! TAAAAACAAAATGATAAGCG+TGG + chr3_2:80238945-80238964 None:intergenic 25.0%
! ACGGGTATTTTATCTTCAAA+TGG - chr3_2:80233203-80233222 Msa0429050:three_prime_UTR 30.0%
ACTTCAAAAGTAATTTGGGA+AGG + chr3_2:80233245-80233264 None:intergenic 30.0%
CACACACTTCAAAAGTAATT+TGG + chr3_2:80233250-80233269 None:intergenic 30.0%
AATTGGAAGTTGTTGGAATA+TGG + chr3_2:80233394-80233413 Msa0429060:CDS 30.0%
ATATTCCAACAACTTCCAAT+TGG - chr3_2:80233393-80233412 Msa0429050:three_prime_UTR 30.0%
ATATGGGAAAAGAACTTACT+AGG + chr3_2:80233494-80233513 Msa0429060:CDS 30.0%
TTGTAGTATAGAGAATGTGT+TGG + chr3_2:80233693-80233712 Msa0429060:CDS 30.0%
AACACATTCTCTATACTACA+AGG - chr3_2:80233692-80233711 Msa0429050:three_prime_UTR 30.0%
TCTGGATATGAGAAAAAATG+TGG - chr3_2:80233843-80233862 Msa0429050:three_prime_UTR 30.0%
CTGGTTATGAGAAAAAAAAG+TGG - chr3_2:80234229-80234248 Msa0429050:three_prime_UTR 30.0%
TCTTTATAGTAGTGGCAATA+TGG + chr3_2:80234497-80234516 None:intergenic 30.0%
ATACTAGTTATGTGTGTCTA+CGG - chr3_2:80234531-80234550 Msa0429050:three_prime_UTR 30.0%
AAATCTATCATTGTCACGAA+TGG - chr3_2:80234559-80234578 Msa0429050:three_prime_UTR 30.0%
AATCTATCATTGTCACGAAT+GGG - chr3_2:80234560-80234579 Msa0429050:three_prime_UTR 30.0%
!! GTCTTTTGAGAATTTACTGT+GGG - chr3_2:80234583-80234602 Msa0429050:three_prime_UTR 30.0%
AATGAACTTCGATCAATTGA+AGG - chr3_2:80234629-80234648 Msa0429050:three_prime_UTR 30.0%
AAATTATAGTGGTGTTTGAG+TGG + chr3_2:80234701-80234720 None:intergenic 30.0%
CTAAAATTGCCAAAAGTGAT+AGG + chr3_2:80234906-80234925 None:intergenic 30.0%
! TATCATTGCTTCTAAGAAGT+TGG - chr3_2:80234930-80234949 Msa0429050:three_prime_UTR 30.0%
!!! TGACACTGAATTTTTTGACA+GGG - chr3_2:80234962-80234981 Msa0429050:three_prime_UTR 30.0%
TAAACAAGATAGAAGTTGCA+TGG + chr3_2:80234995-80235014 None:intergenic 30.0%
AATATTTCTTGCAATGAGCT+AGG - chr3_2:80235090-80235109 Msa0429050:three_prime_UTR 30.0%
AATACTTCAGTATGTGCTAA+AGG + chr3_2:80235156-80235175 None:intergenic 30.0%
!! TTATAGTGCCACTAAGTTTT+GGG - chr3_2:80235209-80235228 Msa0429050:three_prime_UTR 30.0%
!! TTGACTGATTTGAACATATC+AGG - chr3_2:80235261-80235280 Msa0429050:three_prime_UTR 30.0%
TATTGATACTATGATTGCTC+TGG - chr3_2:80235494-80235513 Msa0429050:three_prime_UTR 30.0%
CTTCATTGCAAATTTGGTAA+AGG + chr3_2:80235593-80235612 None:intergenic 30.0%
CTTTACCAAATTTGCAATGA+AGG - chr3_2:80235591-80235610 Msa0429050:three_prime_UTR 30.0%
! TTAAAGATCGCATTTTCTCA+AGG + chr3_2:80235632-80235651 None:intergenic 30.0%
CAGCAATGTAACAAAAGATA+CGG + chr3_2:80235989-80236008 None:intergenic 30.0%
AAGTTAGTATCAGAGACAAT+CGG - chr3_2:80236027-80236046 Msa0429050:intron 30.0%
AACTATTGACCAACAATTCA+TGG + chr3_2:80236145-80236164 None:intergenic 30.0%
AATGCTTAAACTGTTTAGGT+AGG - chr3_2:80236399-80236418 Msa0429050:intron 30.0%
ATGCTTAAACTGTTTAGGTA+GGG - chr3_2:80236400-80236419 Msa0429050:intron 30.0%
!! CTTCACTTGTTTTCTCTTTT+GGG + chr3_2:80236696-80236715 None:intergenic 30.0%
TCATGAAATTGCAAGTGAAA+GGG - chr3_2:80236807-80236826 Msa0429050:intron 30.0%
! AATTGGCCATTGATAATAGA+AGG - chr3_2:80236916-80236935 Msa0429050:intron 30.0%
AATATTGACATCCAAGTTAC+TGG - chr3_2:80237125-80237144 Msa0429050:intron 30.0%
AGGACTACGAATTATTCAAA+AGG + chr3_2:80237266-80237285 None:intergenic 30.0%
AAAAGCGATTAAAGCAAACA+TGG - chr3_2:80237574-80237593 Msa0429050:intron 30.0%
TTGAACGTAATCACATGTAT+CGG + chr3_2:80237657-80237676 None:intergenic 30.0%
! AGTTAAGTTGTGTTAAAAGG+AGG + chr3_2:80237773-80237792 None:intergenic 30.0%
TATCATGAAGAGCAAAGTTT+CGG + chr3_2:80237950-80237969 None:intergenic 30.0%
TAGGCGTTAATAAATGATTC+TGG + chr3_2:80238006-80238025 None:intergenic 30.0%
TTATAAGGAAGCTCATGAAT+TGG + chr3_2:80238182-80238201 None:intergenic 30.0%
! ATTAGTCTATGTAGTTGAAG+GGG + chr3_2:80239085-80239104 None:intergenic 30.0%
! GAATTAGTCTATGTAGTTGA+AGG + chr3_2:80239087-80239106 None:intergenic 30.0%
!!! CAAGAATGATGTGCTATTTT+TGG - chr3_2:80239571-80239590 Msa0429050:intron 30.0%
!!! AGAATGATGTGCTATTTTTG+GGG - chr3_2:80239573-80239592 Msa0429050:intron 30.0%
! CTTTTGAATGACATAGCTAA+AGG + chr3_2:80239864-80239883 None:intergenic 30.0%
ATATTCAAAGCTGAACCAAA+CGG - chr3_2:80240012-80240031 Msa0429050:intron 30.0%
!!! AAACTTATTTTTTTGCAGGC+TGG + chr3_2:80240256-80240275 None:intergenic 30.0%
TTACATTGTCTAATCGAAAC+TGG + chr3_2:80240432-80240451 None:intergenic 30.0%
TGTCAAAGTTTGGCAATAAA+TGG - chr3_2:80240457-80240476 Msa0429050:intron 30.0%
AGTTTGGCAATAAATGGTTA+AGG - chr3_2:80240463-80240482 Msa0429050:intron 30.0%
TAACACTAAGTTTCCAATAC+TGG + chr3_2:80240522-80240541 None:intergenic 30.0%
GTGAGAATAAAATCTGAATG+AGG - chr3_2:80240590-80240609 Msa0429050:intron 30.0%
GTGAGAATAAAATCTGAATG+AGG - chr3_2:80240590-80240609 Msa0429050:intron 30.0%
! AATTTTACCAGAGGTTGAAA+AGG - chr3_2:80240697-80240716 Msa0429050:intron 30.0%
GACTATAAAAACCACTCAAA+TGG - chr3_2:80240753-80240772 Msa0429050:intron 30.0%
TTGAATATGAGCTGGAATTA+TGG + chr3_2:80240900-80240919 None:intergenic 30.0%
ATTCCAGCTCATATTCAAAA+CGG - chr3_2:80240902-80240921 Msa0429050:intron 30.0%
!!! GTCAAACTTTTTTTCTCTCT+TGG - chr3_2:80241001-80241020 Msa0429050:intron 30.0%
!!! TTGAGTGTTATTGCTTTTTC+AGG + chr3_2:80241027-80241046 None:intergenic 30.0%
AACACTCAAATACATATGCT+TGG - chr3_2:80241038-80241057 Msa0429050:intron 30.0%
TTTACTAATCTGTCTCGTAA+AGG - chr3_2:80241080-80241099 Msa0429050:intron 30.0%
GTAAAGGAATGAGAGTAATT+AGG - chr3_2:80241096-80241115 Msa0429050:intron 30.0%
!!! GGCTAATTTTAATTGGTTGT+TGG + chr3_2:80241176-80241195 None:intergenic 30.0%
TTGATGCAAATAAGACCAAA+CGG - chr3_2:80241359-80241378 Msa0429050:intron 30.0%
AAGATGTACTACTGTACAAT+TGG + chr3_2:80241422-80241441 None:intergenic 30.0%
CTCCAATTTAGATAAGTAGA+AGG + chr3_2:80241519-80241538 Msa0429070:CDS 30.0%
CCAAGTTAAAAGAAGAACAA+GGG + chr3_2:80241907-80241926 Msa0429070:CDS 30.0%
TTATATATAGAACAAGGGCA+TGG + chr3_2:80242098-80242117 Msa0429070:CDS 30.0%
ATTCTGAGCAATCTACATTT+AGG + chr3_2:80242838-80242857 None:intergenic 30.0%
!! GTTTGAGTATATTTTGAGAG+AGG - chr3_2:80243017-80243036 Msa0429050:intron 30.0%
!! AGAGAGGTATATACTTTTGA+TGG - chr3_2:80243033-80243052 Msa0429050:intron 30.0%
!! TTTGATGGCTACACATTTTA+AGG - chr3_2:80243048-80243067 Msa0429050:intron 30.0%
! TTTGAAGCTTATGCATTGTT+TGG - chr3_2:80243079-80243098 Msa0429050:intron 30.0%
ATATCATTGGATTTGTCTTC+GGG + chr3_2:80243625-80243644 None:intergenic 30.0%
CATATCATTGGATTTGTCTT+CGG + chr3_2:80243626-80243645 None:intergenic 30.0%
TTAAATGGAGACCATATCAT+TGG + chr3_2:80243638-80243657 None:intergenic 30.0%
TGATATGGTCTCCATTTAAA+AGG - chr3_2:80243639-80243658 Msa0429050:intron 30.0%
!! TCATGCATTTGTTGTTTGTT+AGG - chr3_2:80243701-80243720 Msa0429050:intron 30.0%
AAGACATGATCAATATCAGA+TGG - chr3_2:80243837-80243856 Msa0429050:intron 30.0%
TGAAATACGATCCTTGAAAA+TGG - chr3_2:80243875-80243894 Msa0429050:intron 30.0%
! GACAATTTCAACCATTTTCA+AGG + chr3_2:80243889-80243908 None:intergenic 30.0%
! ATCAAGTTTAGGGTAGTTAA+GGG - chr3_2:80243909-80243928 Msa0429050:intron 30.0%
AACTATTGACCAACAATTCA+TGG + chr3_2:80236145-80236164 None:intergenic 30.0%
AATGCTTAAACTGTTTAGGT+AGG - chr3_2:80236399-80236418 Msa0429050:intron 30.0%
ATGCTTAAACTGTTTAGGTA+GGG - chr3_2:80236400-80236419 Msa0429050:intron 30.0%
AAGAGGCTAAAAGTAGAAAT+TGG + chr3_2:80236640-80236659 None:intergenic 30.0%
!! CTTCACTTGTTTTCTCTTTT+GGG + chr3_2:80236696-80236715 None:intergenic 30.0%
TCATGAAATTGCAAGTGAAA+GGG - chr3_2:80236807-80236826 Msa0429050:intron 30.0%
AAGAGATACACCTTGAAATT+TGG - chr3_2:80245026-80245045 Msa0429050:CDS 30.0%
! AATTGGCCATTGATAATAGA+AGG - chr3_2:80236916-80236935 Msa0429050:intron 30.0%
AATATTGACATCCAAGTTAC+TGG - chr3_2:80237125-80237144 Msa0429050:intron 30.0%
AGGACTACGAATTATTCAAA+AGG + chr3_2:80237266-80237285 None:intergenic 30.0%
AAAAGCGATTAAAGCAAACA+TGG - chr3_2:80237574-80237593 Msa0429050:intron 30.0%
TTGAACGTAATCACATGTAT+CGG + chr3_2:80237657-80237676 None:intergenic 30.0%
! AGTTAAGTTGTGTTAAAAGG+AGG + chr3_2:80237773-80237792 None:intergenic 30.0%
TATCATGAAGAGCAAAGTTT+CGG + chr3_2:80237950-80237969 None:intergenic 30.0%
TAGGCGTTAATAAATGATTC+TGG + chr3_2:80238006-80238025 None:intergenic 30.0%
TTATAAGGAAGCTCATGAAT+TGG + chr3_2:80238182-80238201 None:intergenic 30.0%
AAATTCAACTTGACCTTAGA+CGG - chr3_2:80247073-80247092 Msa0429050:CDS 30.0%
AACGGTGATCTCTATAGAAT+AGG + chr3_2:80233174-80233193 None:intergenic 35.0%
TATTCTATAGAGATCACCGT+TGG - chr3_2:80233173-80233192 Msa0429050:three_prime_UTR 35.0%
ATGGTGATTAGTAGATACAG+CGG + chr3_2:80233375-80233394 Msa0429060:CDS 35.0%
GTAAAGCTTGAGAACTTCTT+CGG + chr3_2:80233649-80233668 Msa0429060:CDS 35.0%
!!! CATTTTTTCAAGCACAGAGT+TGG + chr3_2:80233888-80233907 Msa0429060:CDS 35.0%
CTGATAATTTACTCCTTCTG+TGG - chr3_2:80234199-80234218 Msa0429050:three_prime_UTR 35.0%
TCAATCTGAGAATTCAAGCT+CGG + chr3_2:80234280-80234299 None:intergenic 35.0%
ATCTATCATTGTCACGAATG+GGG - chr3_2:80234561-80234580 Msa0429050:three_prime_UTR 35.0%
!! GGTCTTTTGAGAATTTACTG+TGG - chr3_2:80234582-80234601 Msa0429050:three_prime_UTR 35.0%
CAATTGATCGAAGTTCATTG+TGG + chr3_2:80234628-80234647 None:intergenic 35.0%
!! TCCACTTTTCCTATCACTTT+TGG - chr3_2:80234894-80234913 Msa0429050:three_prime_UTR 35.0%
!!! CTGACACTGAATTTTTTGAC+AGG - chr3_2:80234961-80234980 Msa0429050:three_prime_UTR 35.0%
!!! ACTGAATTTTTTGACAGGGT+TGG - chr3_2:80234966-80234985 Msa0429050:three_prime_UTR 35.0%
!! ACTTGGTAGTTTTACTGCTT+TGG - chr3_2:80235032-80235051 Msa0429050:three_prime_UTR 35.0%
!! CTTGGTAGTTTTACTGCTTT+GGG - chr3_2:80235033-80235052 Msa0429050:three_prime_UTR 35.0%
!! TTGGTAGTTTTACTGCTTTG+GGG - chr3_2:80235034-80235053 Msa0429050:three_prime_UTR 35.0%
! ACATACTGAAGTATTTGCCT+GGG - chr3_2:80235161-80235180 Msa0429050:three_prime_UTR 35.0%
TGCCACAAAGGATTTCAAAA+CGG + chr3_2:80235188-80235207 None:intergenic 35.0%
!! GTTATAGTGCCACTAAGTTT+TGG - chr3_2:80235208-80235227 Msa0429050:three_prime_UTR 35.0%
TCATTTAAGCACTTCAGAGT+AGG + chr3_2:80235336-80235355 None:intergenic 35.0%
ATGAAGAGTTATAGTGACCT+TGG - chr3_2:80235355-80235374 Msa0429050:three_prime_UTR 35.0%
!! TAGTGACCTTGGTTTGTTTA+TGG - chr3_2:80235366-80235385 Msa0429050:three_prime_UTR 35.0%
AGGAGTGAGATTTGAACAAA+GGG + chr3_2:80235573-80235592 None:intergenic 35.0%
AAGGAGTGAGATTTGAACAA+AGG + chr3_2:80235574-80235593 None:intergenic 35.0%
TTGCACCTTCATTGCAAATT+TGG + chr3_2:80235599-80235618 None:intergenic 35.0%
AAATTTGTGTACCCTAGTGT+TGG + chr3_2:80235785-80235804 None:intergenic 35.0%
!! GAAAGGTGTTTCATTAGCTA+TGG + chr3_2:80235929-80235948 None:intergenic 35.0%
CTATTGGGAAGAATGTATGT+TGG + chr3_2:80235951-80235970 None:intergenic 35.0%
AGCAGTCTTGAACTTCTATT+GGG + chr3_2:80235966-80235985 None:intergenic 35.0%
TATACAAGCGAAAAGACATG+AGG - chr3_2:80236201-80236220 Msa0429050:intron 35.0%
TAAAACAAGTCTTCACTCGT+GGG + chr3_2:80236276-80236295 None:intergenic 35.0%
TTAAAACAAGTCTTCACTCG+TGG + chr3_2:80236277-80236296 None:intergenic 35.0%
GAGAAATGTTAACCAATGTC+CGG - chr3_2:80236523-80236542 Msa0429050:intron 35.0%
AGAAATGTTAACCAATGTCC+GGG - chr3_2:80236524-80236543 Msa0429050:intron 35.0%
!! CCTTCACTTGTTTTCTCTTT+TGG + chr3_2:80236697-80236716 None:intergenic 35.0%
CCAAAAGAGAAAACAAGTGA+AGG - chr3_2:80236694-80236713 Msa0429050:intron 35.0%
CAAGTGAAGGAACAAAGTAA+AGG - chr3_2:80236707-80236726 Msa0429050:intron 35.0%
GTCATGAAATTGCAAGTGAA+AGG - chr3_2:80236806-80236825 Msa0429050:intron 35.0%
GAGAGATACACCTTGAAATT+TGG - chr3_2:80236875-80236894 Msa0429050:intron 35.0%
GCTTCTCCTTCTATTATCAA+TGG + chr3_2:80236925-80236944 None:intergenic 35.0%
AAATGTTGGAACCAGTAACT+TGG + chr3_2:80237139-80237158 None:intergenic 35.0%
CAAAACCAAAACCAGATTGT+GGG - chr3_2:80237216-80237235 Msa0429050:intron 35.0%
AAAACCAAAACCAGATTGTG+GGG - chr3_2:80237217-80237236 Msa0429050:intron 35.0%
ATTCAAAAGGTGAGTTAGTG+TGG + chr3_2:80237253-80237272 None:intergenic 35.0%
TGTGGCATGGAAAATTGAAA+AGG - chr3_2:80237295-80237314 Msa0429050:intron 35.0%
! TTGGCATATTTTATCGTGAG+AGG - chr3_2:80237370-80237389 Msa0429050:intron 35.0%
! ATATTTTATCGTGAGAGGAG+AGG - chr3_2:80237375-80237394 Msa0429050:intron 35.0%
!! GTTTGAAGTGATTTTGAGAG+TGG + chr3_2:80237409-80237428 None:intergenic 35.0%
AATAAAACGAGAGGAACATC+AGG + chr3_2:80237803-80237822 None:intergenic 35.0%
CCAACTGAAAATAAAACGAG+AGG + chr3_2:80237812-80237831 None:intergenic 35.0%
!!! CCTCTCGTTTTATTTTCAGT+TGG - chr3_2:80237809-80237828 Msa0429050:intron 35.0%
!!! GTTGGTTTTGAAACAACGAA+CGG - chr3_2:80237827-80237846 Msa0429050:intron 35.0%
CGTTTCTTTCTTAATCCAGA+AGG - chr3_2:80237890-80237909 Msa0429050:intron 35.0%
AAGACTTATGAGTCAAGAGT+AGG + chr3_2:80238025-80238044 None:intergenic 35.0%
GGAAGCAAAGAAAGCTTATA+AGG + chr3_2:80238197-80238216 None:intergenic 35.0%
GTGTTATGAAGGGAAGAAAA+TGG + chr3_2:80238224-80238243 None:intergenic 35.0%
!! GCTTTGCTTTGATTGCTTTT+CGG - chr3_2:80238638-80238657 Msa0429050:intron 35.0%
!! CTTTGATTGCTTTTCGGTTT+TGG - chr3_2:80238644-80238663 Msa0429050:intron 35.0%
!!! TTGCTTTTCGGTTTTGGAAT+CGG - chr3_2:80238650-80238669 Msa0429050:intron 35.0%
! AGTTTAGCGAGGAATTTTTG+TGG - chr3_2:80238673-80238692 Msa0429050:intron 35.0%
!!! TGAGGGTGTTAGATTTTTCT+GGG - chr3_2:80238821-80238840 Msa0429050:intron 35.0%
!!! TGTGTGTGTGTTTTGAGAAT+CGG - chr3_2:80238875-80238894 Msa0429050:intron 35.0%
AAGTTCAACTTGACCTTAGA+CGG - chr3_2:80238913-80238932 Msa0429050:intron 35.0%
AAACAAAATGATAAGCGTGG+CGG + chr3_2:80238942-80238961 None:intergenic 35.0%
! AGACGTTGTGTCATTGAAAT+TGG + chr3_2:80239318-80239337 None:intergenic 35.0%
! TGTTTGGCTAGAATTGCTTT+TGG + chr3_2:80239672-80239691 None:intergenic 35.0%
TTCTAGCCAAACAATGTGTT+TGG - chr3_2:80239679-80239698 Msa0429050:intron 35.0%
! TTCTAGAAAAGCTAGAAGCT+AGG + chr3_2:80239763-80239782 None:intergenic 35.0%
TATTCAAAGCTGAACCAAAC+GGG - chr3_2:80240013-80240032 Msa0429050:intron 35.0%
! TACATTTTATTCGGGCTTTC+GGG + chr3_2:80240139-80240158 None:intergenic 35.0%
! CTACATTTTATTCGGGCTTT+CGG + chr3_2:80240140-80240159 None:intergenic 35.0%
GAAAGCCCGAATAAAATGTA+GGG - chr3_2:80240139-80240158 Msa0429050:intron 35.0%
AAATTCGGGCTGCAATTATT+CGG + chr3_2:80240171-80240190 None:intergenic 35.0%
!!! ATTGCAGCCCGAATTTTTTT+AGG - chr3_2:80240175-80240194 Msa0429050:intron 35.0%
!!! TTGCAGCCCGAATTTTTTTA+GGG - chr3_2:80240176-80240195 Msa0429050:intron 35.0%
TGAAATTGCATGTCCTGATA+GGG + chr3_2:80240358-80240377 None:intergenic 35.0%
TTGGCAATAAATGGTTAAGG+AGG - chr3_2:80240466-80240485 Msa0429050:intron 35.0%
!!! TTTTTTGAAGGAGCCAGTAT+TGG - chr3_2:80240506-80240525 Msa0429050:intron 35.0%
! TTTTTGTCCTTTTCAACCTC+TGG + chr3_2:80240707-80240726 None:intergenic 35.0%
TTCCAGCTCATATTCAAAAC+GGG - chr3_2:80240903-80240922 Msa0429050:intron 35.0%
AGAAAGTAGAGCTGTCAAAA+CGG + chr3_2:80240978-80240997 None:intergenic 35.0%
! TTTTGACAGCTCTACTTTCT+TGG - chr3_2:80240978-80240997 Msa0429050:intron 35.0%
TTTGACAGCTCTACTTTCTT+GGG - chr3_2:80240979-80240998 Msa0429050:intron 35.0%
ATTAGTAAATGCCACACCAT+AGG + chr3_2:80241069-80241088 None:intergenic 35.0%
!! AGACTAGCTTTGAAGAATTG+TGG + chr3_2:80241295-80241314 None:intergenic 35.0%
! CAATTCTTCAAAGCTAGTCT+AGG - chr3_2:80241295-80241314 Msa0429050:intron 35.0%
AAAGATAGCATATGCCACAA+TGG + chr3_2:80241632-80241651 Msa0429070:CDS 35.0%
!! CCCTTGTTCTTCTTTTAACT+TGG - chr3_2:80241904-80241923 Msa0429050:intron 35.0%
GCCAAGTTAAAAGAAGAACA+AGG + chr3_2:80241908-80241927 Msa0429070:CDS 35.0%
!! TATGGACTATTTTCCAAGAC+CGG + chr3_2:80242438-80242457 None:intergenic 35.0%
ACCTTTCTTTAATCTTCGCA+TGG - chr3_2:80242518-80242537 Msa0429050:intron 35.0%
ACCATGCGAAGATTAAAGAA+AGG + chr3_2:80242522-80242541 None:intergenic 35.0%
TTCTTTAATCTTCGCATGGT+TGG - chr3_2:80242522-80242541 Msa0429050:intron 35.0%
TAGTCCAAGACAAGAGTTAT+TGG + chr3_2:80242581-80242600 None:intergenic 35.0%
TTCCTGTTCTTCAATGGAAA+TGG + chr3_2:80242784-80242803 None:intergenic 35.0%
TGAGCAATCTACATTTAGGT+TGG + chr3_2:80242834-80242853 None:intergenic 35.0%
TGCAGAGAATGTTGAAAAAC+AGG - chr3_2:80242872-80242891 Msa0429050:intron 35.0%
! AATACCCCTGTTCTTCATTT+TGG + chr3_2:80242911-80242930 None:intergenic 35.0%
GAAGTGAAAAAACACACGTT+TGG + chr3_2:80243185-80243204 None:intergenic 35.0%
! TTCAAAAAGTCGTGGATTGT+GGG + chr3_2:80243256-80243275 None:intergenic 35.0%
! TTTCAAAAAGTCGTGGATTG+TGG + chr3_2:80243257-80243276 None:intergenic 35.0%
!! AATAGAAGGGAAAGTTTTGG+TGG - chr3_2:80243286-80243305 Msa0429050:intron 35.0%
CCTATGACACAAATAGAAAC+CGG + chr3_2:80243360-80243379 None:intergenic 35.0%
TTGTGTCATAGGCAAATTGA+AGG - chr3_2:80243368-80243387 Msa0429050:intron 35.0%
TTATTACTCTTCTTGCAACG+AGG + chr3_2:80243398-80243417 None:intergenic 35.0%
!!! AATTGTTTTGAAGGTCCTCA+AGG + chr3_2:80243434-80243453 None:intergenic 35.0%
CGAAGACAAATCCAATGATA+TGG - chr3_2:80243624-80243643 Msa0429050:intron 35.0%
!! GCATTTGTTGTTTGTTAGGA+TGG - chr3_2:80243705-80243724 Msa0429050:intron 35.0%
! TCATGTCTTTGTTGCTTGAA+GGG + chr3_2:80243826-80243845 None:intergenic 35.0%
! ATCATGTCTTTGTTGCTTGA+AGG + chr3_2:80243827-80243846 None:intergenic 35.0%
! CATCAAGTTTAGGGTAGTTA+AGG - chr3_2:80243908-80243927 Msa0429050:intron 35.0%
TGTTTGATGGAAGAACAATC+TGG - chr3_2:80244134-80244153 Msa0429050:three_prime_UTR 35.0%
TATACAAGCGAAAAGACATG+AGG - chr3_2:80236201-80236220 Msa0429050:intron 35.0%
AAAAACAAGTCTTCACTCGT+GGG + chr3_2:80244424-80244443 None:intergenic 35.0%
TAAAAACAAGTCTTCACTCG+TGG + chr3_2:80244425-80244444 None:intergenic 35.0%
GAGAAATGTTAACCAATGTC+CGG - chr3_2:80236523-80236542 Msa0429050:intron 35.0%
AGAAATGTTAACCAATGTCC+GGG - chr3_2:80236524-80236543 Msa0429050:intron 35.0%
!! CCTTCACTTGTTTTCTCTTT+TGG + chr3_2:80236697-80236716 None:intergenic 35.0%
CCAAAAGAGAAAACAAGTGA+AGG - chr3_2:80236694-80236713 Msa0429050:intron 35.0%
CAAGTGAAGGAACAAAGTAA+AGG - chr3_2:80236707-80236726 Msa0429050:intron 35.0%
GTCATGAAATTGCAAGTGAA+AGG - chr3_2:80236806-80236825 Msa0429050:intron 35.0%
GCTTCTCCTTCTATTATCAA+TGG + chr3_2:80236925-80236944 None:intergenic 35.0%
AAATGTTGGAACCAGTAACT+TGG + chr3_2:80237139-80237158 None:intergenic 35.0%
CAAAACCAAAACCAGATTGT+GGG - chr3_2:80237216-80237235 Msa0429050:intron 35.0%
AAAACCAAAACCAGATTGTG+GGG - chr3_2:80237217-80237236 Msa0429050:intron 35.0%
ATTCAAAAGGTGAGTTAGTG+TGG + chr3_2:80237253-80237272 None:intergenic 35.0%
TGTGGCATGGAAAATTGAAA+AGG - chr3_2:80237295-80237314 Msa0429050:intron 35.0%
! TTGGCATATTTTATCGTGAG+AGG - chr3_2:80237370-80237389 Msa0429050:intron 35.0%
! ATATTTTATCGTGAGAGGAG+AGG - chr3_2:80237375-80237394 Msa0429050:intron 35.0%
!! GTTTGAAGTGATTTTGAGAG+TGG + chr3_2:80237409-80237428 None:intergenic 35.0%
AATAAAACGAGAGGAACATC+AGG + chr3_2:80237803-80237822 None:intergenic 35.0%
CCAACTGAAAATAAAACGAG+AGG + chr3_2:80237812-80237831 None:intergenic 35.0%
!!! CCTCTCGTTTTATTTTCAGT+TGG - chr3_2:80237809-80237828 Msa0429050:intron 35.0%
!!! GTTGGTTTTGAAACAACGAA+CGG - chr3_2:80237827-80237846 Msa0429050:intron 35.0%
CGTTTCTTTCTTAATCCAGA+AGG - chr3_2:80237890-80237909 Msa0429050:intron 35.0%
GGAAGCAAAGAAAGCTTATA+AGG + chr3_2:80238197-80238216 None:intergenic 35.0%
GTGTTATGAAGGGAAGAAAA+TGG + chr3_2:80238224-80238243 None:intergenic 35.0%
!! GCTTTGCTTTGATTGCTTTT+CGG - chr3_2:80238638-80238657 Msa0429050:intron 35.0%
!! CTTTGATTGCTTTTCGGTTT+TGG - chr3_2:80238644-80238663 Msa0429050:intron 35.0%
!!! TTGCTTTTCGGTTTTGGAAT+CGG - chr3_2:80238650-80238669 Msa0429050:intron 35.0%
! AGTTTAGCGAGGAATTTTTG+TGG - chr3_2:80238673-80238692 Msa0429050:intron 35.0%
!!! TGAGGGTGTTAGATTTTTCT+GGG - chr3_2:80238821-80238840 Msa0429050:intron 35.0%
!!! TGTGTGTGTGTTTTGAGAAT+CGG - chr3_2:80238875-80238894 Msa0429050:intron 35.0%
AAACAAAATGATAAGCGTGG+CGG + chr3_2:80238942-80238961 None:intergenic 35.0%
AATACCCGTAGAATGTCCAA+CGG + chr3_2:80233192-80233211 None:intergenic 40.0%
! AACGTGGAAAGTTGACTTCA+TGG - chr3_2:80233303-80233322 Msa0429050:intron 40.0%
! TGGAAAGTTGACTTCATGGA+AGG - chr3_2:80233307-80233326 Msa0429050:intron 40.0%
ATGCACCAATTGGAAGTTGT+TGG + chr3_2:80233401-80233420 Msa0429060:CDS 40.0%
AACAACTTCCAATTGGTGCA+TGG - chr3_2:80233400-80233419 Msa0429050:three_prime_UTR 40.0%
AAAGAACTTACTAGGTGGCA+TGG + chr3_2:80233486-80233505 Msa0429060:CDS 40.0%
TGGGAAAAGAACTTACTAGG+TGG + chr3_2:80233491-80233510 Msa0429060:CDS 40.0%
AGCACAGTCTGGTATTACTT+CGG - chr3_2:80233718-80233737 Msa0429050:three_prime_UTR 40.0%
CAATTCTACAATTGTGCGCA+GGG + chr3_2:80234132-80234151 None:intergenic 40.0%
TTGGCTGTCTGAATTTCTGA+TGG - chr3_2:80234149-80234168 Msa0429050:three_prime_UTR 40.0%
TGGCTGTCTGAATTTCTGAT+GGG - chr3_2:80234150-80234169 Msa0429050:three_prime_UTR 40.0%
AACCAGAAGAAAACCACAGA+AGG + chr3_2:80234215-80234234 None:intergenic 40.0%
CTGATGCGTCTTTATAGTAG+TGG + chr3_2:80234505-80234524 None:intergenic 40.0%
ATCGAAGTTCATTGTGGCTA+AGG + chr3_2:80234622-80234641 None:intergenic 40.0%
TATAGTGGTGTTTGAGTGGA+GGG + chr3_2:80234697-80234716 None:intergenic 40.0%
TTATAGTGGTGTTTGAGTGG+AGG + chr3_2:80234698-80234717 None:intergenic 40.0%
AGCGTTATTATTACTGGGTG+TGG - chr3_2:80234721-80234740 Msa0429050:three_prime_UTR 40.0%
!! AAGCTTGGGTTAGCAAAAAG+TGG + chr3_2:80234804-80234823 None:intergenic 40.0%
GCCAAAAGTGATAGGAAAAG+TGG + chr3_2:80234898-80234917 None:intergenic 40.0%
! TGCTTCTAAGAAGTTGGAAG+AGG - chr3_2:80234936-80234955 Msa0429050:three_prime_UTR 40.0%
! GCTTCTAAGAAGTTGGAAGA+GGG - chr3_2:80234937-80234956 Msa0429050:three_prime_UTR 40.0%
!!! GAATTTTTTGACAGGGTTGG+AGG - chr3_2:80234969-80234988 Msa0429050:three_prime_UTR 40.0%
! CACATACTGAAGTATTTGCC+TGG - chr3_2:80235160-80235179 Msa0429050:three_prime_UTR 40.0%
!!! GACCGTTTTGAAATCCTTTG+TGG - chr3_2:80235183-80235202 Msa0429050:three_prime_UTR 40.0%
GAAAGCTTCCCAAAACTTAG+TGG + chr3_2:80235220-80235239 None:intergenic 40.0%
ACCAAGTAGAAACCAACACT+AGG - chr3_2:80235770-80235789 Msa0429050:three_prime_UTR 40.0%
CCAAGTAGAAACCAACACTA+GGG - chr3_2:80235771-80235790 Msa0429050:three_prime_UTR 40.0%
GATGTAAGAAGCAAATGTGG+CGG + chr3_2:80235871-80235890 None:intergenic 40.0%
CAGGATGTAAGAAGCAAATG+TGG + chr3_2:80235874-80235893 None:intergenic 40.0%
!! ATTTCGGTGTTTCTTGGCTT+TGG + chr3_2:80235897-80235916 None:intergenic 40.0%
!! CATGTCATTTCGGTGTTTCT+TGG + chr3_2:80235903-80235922 None:intergenic 40.0%
CAAGAAACACCGAAATGACA+TGG - chr3_2:80235901-80235920 Msa0429050:three_prime_UTR 40.0%
GGGAAGAATGTATGTTGGAA+AGG + chr3_2:80235946-80235965 None:intergenic 40.0%
GAGCAGTCTTGAACTTCTAT+TGG + chr3_2:80235967-80235986 None:intergenic 40.0%
TTAGTATCAGAGACAATCGG+TGG - chr3_2:80236030-80236049 Msa0429050:intron 40.0%
ACCAACAATTCATGGCATCA+CGG + chr3_2:80236137-80236156 None:intergenic 40.0%
ACTCGTGGGTTTGTATTAGT+GGG + chr3_2:80236262-80236281 None:intergenic 40.0%
GAAATGTTAACCAATGTCCG+GGG - chr3_2:80236525-80236544 Msa0429050:intron 40.0%
!! CTCTGGGACATTGTTTAAAG+AGG + chr3_2:80236657-80236676 None:intergenic 40.0%
CTCTTTAAACAATGTCCCAG+AGG - chr3_2:80236655-80236674 Msa0429050:intron 40.0%
!! CTCTTTTGGGTCATGTTAAC+CGG + chr3_2:80236683-80236702 None:intergenic 40.0%
GTTGTGAATTCATGGAAGCA+TGG + chr3_2:80236783-80236802 None:intergenic 40.0%
ATGACGTGGTTGTGAATTCA+TGG + chr3_2:80236791-80236810 None:intergenic 40.0%
TCACTTGCAATTTCATGACG+TGG + chr3_2:80236805-80236824 None:intergenic 40.0%
TCAAGACAGCAAAAGTTGCA+CGG - chr3_2:80236848-80236867 Msa0429050:intron 40.0%
AAAAACACGAGAAGCCACAT+GGG + chr3_2:80236953-80236972 None:intergenic 40.0%
AGTGCTAAATTAGACAGACG+TGG - chr3_2:80237007-80237026 Msa0429050:intron 40.0%
GTGAAAATCTAGGCATGTAG+TGG - chr3_2:80237055-80237074 Msa0429050:intron 40.0%
!!! CCACAATCTGGTTTTGGTTT+TGG + chr3_2:80237218-80237237 None:intergenic 40.0%
CCAAAACCAAAACCAGATTG+TGG - chr3_2:80237215-80237234 Msa0429050:intron 40.0%
CGTAGTCCTAATTACGATTG+TGG - chr3_2:80237277-80237296 Msa0429050:intron 40.0%
TCCTAATTACGATTGTGGCA+TGG - chr3_2:80237282-80237301 Msa0429050:intron 40.0%
TCCATGCCACAATCGTAATT+AGG + chr3_2:80237286-80237305 None:intergenic 40.0%
GCATAGACACGTTTGATCAA+AGG - chr3_2:80237599-80237618 Msa0429050:intron 40.0%
! TAATCACATGTATCGGTGTC+AGG + chr3_2:80237650-80237669 None:intergenic 40.0%
TGAAGGGAAGAAAATGGATG+AGG + chr3_2:80238218-80238237 None:intergenic 40.0%
GCTATGATTCTCGATCTTCA+AGG + chr3_2:80238463-80238482 None:intergenic 40.0%
!! AGCTTTGAGAAGATACGAAG+CGG - chr3_2:80238480-80238499 Msa0429050:intron 40.0%
!!! ATCGAGTTCGATCGCTTTTT+CGG - chr3_2:80238513-80238532 Msa0429050:intron 40.0%
TTAATCTTCCTCAGCATGCA+CGG + chr3_2:80238703-80238722 None:intergenic 40.0%
TTCCGATGAGAAATTTCCTC+CGG - chr3_2:80238798-80238817 Msa0429050:intron 40.0%
GAAAAATCTAACACCCTCAC+CGG + chr3_2:80238820-80238839 None:intergenic 40.0%
!!! GTGAGGGTGTTAGATTTTTC+TGG - chr3_2:80238820-80238839 Msa0429050:intron 40.0%
!!! GAGGGTGTTAGATTTTTCTG+GGG - chr3_2:80238822-80238841 Msa0429050:intron 40.0%
!! AGGGTGTTAGATTTTTCTGG+GGG - chr3_2:80238823-80238842 Msa0429050:intron 40.0%
!!! TCTTTCTTTTAGGGCCTGTT+TGG - chr3_2:80239601-80239620 Msa0429050:intron 40.0%
CTAGAATTGCTTCTCAGAAG+TGG + chr3_2:80239629-80239648 None:intergenic 40.0%
GCTGAACCAAACACATTGTT+TGG + chr3_2:80239688-80239707 None:intergenic 40.0%
!! TCATGGAGAATTGCTTTTGG+AGG + chr3_2:80239730-80239749 None:intergenic 40.0%
! GCTTCATGGAGAATTGCTTT+TGG + chr3_2:80239733-80239752 None:intergenic 40.0%
AGCTAGGATTTGTAGCTTCA+TGG + chr3_2:80239747-80239766 None:intergenic 40.0%
CTACAAGAAAGACACTCTTG+TGG + chr3_2:80240083-80240102 None:intergenic 40.0%
TTCTTGTAGAGCTGTCAAGA+TGG - chr3_2:80240094-80240113 Msa0429050:intron 40.0%
TCTTGTAGAGCTGTCAAGAT+GGG - chr3_2:80240095-80240114 Msa0429050:intron 40.0%
CGAAAGCCCGAATAAAATGT+AGG - chr3_2:80240138-80240157 Msa0429050:intron 40.0%
! CCAGACCCTACATTTTATTC+GGG + chr3_2:80240147-80240166 None:intergenic 40.0%
! CCCAGACCCTACATTTTATT+CGG + chr3_2:80240148-80240167 None:intergenic 40.0%
CCGAATAAAATGTAGGGTCT+GGG - chr3_2:80240145-80240164 Msa0429050:intron 40.0%
!!! TTATTTTTTTGCAGGCTGGC+GGG + chr3_2:80240252-80240271 None:intergenic 40.0%
!!! CTTATTTTTTTGCAGGCTGG+CGG + chr3_2:80240253-80240272 None:intergenic 40.0%
! AGCAAACTAGCACTGTGTTT+TGG + chr3_2:80240288-80240307 None:intergenic 40.0%
TGATTGCAGTGAATCATTGG+AGG + chr3_2:80240334-80240353 None:intergenic 40.0%
GGATGATTGCAGTGAATCAT+TGG + chr3_2:80240337-80240356 None:intergenic 40.0%
CTGAAATTGCATGTCCTGAT+AGG + chr3_2:80240359-80240378 None:intergenic 40.0%
GAAAGTAGAGCTGTCAAAAC+GGG + chr3_2:80240977-80240996 None:intergenic 40.0%
CATATGCTTGGACTTACCTA+TGG - chr3_2:80241050-80241069 Msa0429050:intron 40.0%
CACACAAATACACTCACATG+TGG + chr3_2:80241246-80241265 None:intergenic 40.0%
! CAAAGCTAGTCTAGGTTTAG+AGG - chr3_2:80241303-80241322 Msa0429050:intron 40.0%
ATGCAAATAAGACCAAACGG+TGG - chr3_2:80241362-80241381 Msa0429050:intron 40.0%
TGCAAATAAGACCAAACGGT+GGG - chr3_2:80241363-80241382 Msa0429050:intron 40.0%
ATTGAGCAATCTACACCTTG+AGG - chr3_2:80241658-80241677 Msa0429050:intron 40.0%
TTGAGCAATCTACACCTTGA+GGG - chr3_2:80241659-80241678 Msa0429050:intron 40.0%
TCCTAGTTGACACTTACACA+GGG + chr3_2:80241685-80241704 Msa0429070:CDS 40.0%
TTCCTAGTTGACACTTACAC+AGG + chr3_2:80241686-80241705 Msa0429070:CDS 40.0%
! TATTGACTATTGAGCGTGTG+AGG - chr3_2:80241795-80241814 Msa0429050:intron 40.0%
!! GCAGTGGGTTGTTGAAAAAA+TGG + chr3_2:80241939-80241958 Msa0429070:CDS 40.0%
GCTGCGTTCTACATTTAAGT+TGG - chr3_2:80241997-80242016 Msa0429050:intron 40.0%
TGTGCTCGCCAATTGAAATA+AGG + chr3_2:80242055-80242074 Msa0429070:CDS 40.0%
TACTCGCATCTTGACTGAAA+TGG + chr3_2:80242487-80242506 None:intergenic 40.0%
! GTCAAGATGCGAGTATTGTT+TGG - chr3_2:80242492-80242511 Msa0429050:intron 40.0%
!!! CAAAGTTTTGGACCTTCATG+CGG - chr3_2:80242552-80242571 Msa0429050:intron 40.0%
GCCATCCAAAATGAAGAACA+GGG - chr3_2:80242903-80242922 Msa0429050:intron 40.0%
CCATCCAAAATGAAGAACAG+GGG - chr3_2:80242904-80242923 Msa0429050:intron 40.0%
! TCAAAAAGTCGTGGATTGTG+GGG + chr3_2:80243255-80243274 None:intergenic 40.0%
!! AAGTTTTGGTGGTTCAGTTG+TGG - chr3_2:80243297-80243316 Msa0429050:intron 40.0%
!! AGTTTTGGTGGTTCAGTTGT+GGG - chr3_2:80243298-80243317 Msa0429050:intron 40.0%
CCGGTTTCTATTTGTGTCAT+AGG - chr3_2:80243357-80243376 Msa0429050:intron 40.0%
AAGTCTGATTCTGTTCCTAG+CGG + chr3_2:80243562-80243581 None:intergenic 40.0%
GTTTGGGCTAATTAGGGTAT+GGG + chr3_2:80243603-80243622 None:intergenic 40.0%
! TTGGATTTGTCTTCGGGTTT+GGG + chr3_2:80243619-80243638 None:intergenic 40.0%
! ATTGGATTTGTCTTCGGGTT+TGG + chr3_2:80243620-80243639 None:intergenic 40.0%
! GTTTAGGGTAGTTAAGGGAT+CGG - chr3_2:80243914-80243933 Msa0429050:intron 40.0%
! TTTAGGGTAGTTAAGGGATC+GGG - chr3_2:80243915-80243934 Msa0429050:intron 40.0%
CTAGAGCTAGGAAAAGACAT+AGG + chr3_2:80243970-80243989 None:intergenic 40.0%
TGTTGTCAGGTTTGAGTAGT+AGG + chr3_2:80244032-80244051 None:intergenic 40.0%
ACCAACAATTCATGGCATCA+CGG + chr3_2:80236137-80236156 None:intergenic 40.0%
ACTCGTGGGTTTGTATTAGT+GGG + chr3_2:80236262-80236281 None:intergenic 40.0%
GAAATGTTAACCAATGTCCG+GGG - chr3_2:80236525-80236544 Msa0429050:intron 40.0%
AGCCTCTTTAAACAATGTCC+CGG - chr3_2:80236652-80236671 Msa0429050:intron 40.0%
!! CTCTTTTGGGTCATGTTAAC+CGG + chr3_2:80236683-80236702 None:intergenic 40.0%
GTTGTGAATTCATGGAAGCA+TGG + chr3_2:80236783-80236802 None:intergenic 40.0%
ATGACGTGGTTGTGAATTCA+TGG + chr3_2:80236791-80236810 None:intergenic 40.0%
TCACTTGCAATTTCATGACG+TGG + chr3_2:80236805-80236824 None:intergenic 40.0%
TCAAGACAGCAAAAGTTGCA+CGG - chr3_2:80236848-80236867 Msa0429050:intron 40.0%
AAAAACACGAGAAGCCACAT+GGG + chr3_2:80236953-80236972 None:intergenic 40.0%
AGTGCTAAATTAGACAGACG+TGG - chr3_2:80237007-80237026 Msa0429050:intron 40.0%
GTGAAAATCTAGGCATGTAG+TGG - chr3_2:80237055-80237074 Msa0429050:intron 40.0%
!!! CCACAATCTGGTTTTGGTTT+TGG + chr3_2:80237218-80237237 None:intergenic 40.0%
CCAAAACCAAAACCAGATTG+TGG - chr3_2:80237215-80237234 Msa0429050:intron 40.0%
CGTAGTCCTAATTACGATTG+TGG - chr3_2:80237277-80237296 Msa0429050:intron 40.0%
TCCTAATTACGATTGTGGCA+TGG - chr3_2:80237282-80237301 Msa0429050:intron 40.0%
TCCATGCCACAATCGTAATT+AGG + chr3_2:80237286-80237305 None:intergenic 40.0%
GCATAGACACGTTTGATCAA+AGG - chr3_2:80237599-80237618 Msa0429050:intron 40.0%
! TAATCACATGTATCGGTGTC+AGG + chr3_2:80237650-80237669 None:intergenic 40.0%
AAGACTTATGGGTCAAGAGT+AGG + chr3_2:80246174-80246193 None:intergenic 40.0%
!! GTAGAAGCACTTAACAGGTT+GGG + chr3_2:80238139-80238158 None:intergenic 40.0%
!! TGTAGAAGCACTTAACAGGT+TGG + chr3_2:80246283-80246302 None:intergenic 40.0%
AACCTGTTAAGTGCTTCTAC+AGG - chr3_2:80238139-80238158 Msa0429050:intron 40.0%
TGAAGGGAAGAAAATGGATG+AGG + chr3_2:80238218-80238237 None:intergenic 40.0%
GCTATGATTCTCGATCTTCA+AGG + chr3_2:80238463-80238482 None:intergenic 40.0%
!! AGCTTTGAGAAGATACGAAG+CGG - chr3_2:80238480-80238499 Msa0429050:intron 40.0%
!!! ATCGAGTTCGATCGCTTTTT+CGG - chr3_2:80238513-80238532 Msa0429050:intron 40.0%
TTAATCTTCCTCAGCATGCA+CGG + chr3_2:80238703-80238722 None:intergenic 40.0%
TTCCGATGAGAAATTTCCTC+CGG - chr3_2:80238798-80238817 Msa0429050:intron 40.0%
GAAAAATCTAACACCCTCAC+CGG + chr3_2:80238820-80238839 None:intergenic 40.0%
!!! GTGAGGGTGTTAGATTTTTC+TGG - chr3_2:80238820-80238839 Msa0429050:intron 40.0%
!!! GAGGGTGTTAGATTTTTCTG+GGG - chr3_2:80238822-80238841 Msa0429050:intron 40.0%
!! AGGGTGTTAGATTTTTCTGG+GGG - chr3_2:80238823-80238842 Msa0429050:intron 40.0%
GATCACCGTTGGACATTCTA+CGG - chr3_2:80233184-80233203 Msa0429050:three_prime_UTR 45.0%
ATCACCGTTGGACATTCTAC+GGG - chr3_2:80233185-80233204 Msa0429050:three_prime_UTR 45.0%
GCTCATACAGAACCTGTTGA+CGG - chr3_2:80233278-80233297 Msa0429050:three_prime_UTR 45.0%
CTCATACAGAACCTGTTGAC+GGG - chr3_2:80233279-80233298 Msa0429050:three_prime_UTR 45.0%
AACTTCCAATTGGTGCATGG+AGG - chr3_2:80233403-80233422 Msa0429050:three_prime_UTR 45.0%
AATTGCCTCCATGCACCAAT+TGG + chr3_2:80233411-80233430 Msa0429060:CDS 45.0%
TTCAAGATTCGCTGTCAGAC+TGG - chr3_2:80233450-80233469 Msa0429050:three_prime_UTR 45.0%
TTACACCGAGCTGATGAAGT+TGG - chr3_2:80233665-80233684 Msa0429050:three_prime_UTR 45.0%
TGGATCCAACTTCATCAGCT+CGG + chr3_2:80233673-80233692 Msa0429060:CDS 45.0%
!! TTGAGTTAATGGGCTGTGAC+AGG - chr3_2:80234092-80234111 Msa0429050:three_prime_UTR 45.0%
!! TGAGTTAATGGGCTGTGACA+GGG - chr3_2:80234093-80234112 Msa0429050:three_prime_UTR 45.0%
GTGCGCAGGGCATAAATTAT+AGG + chr3_2:80234119-80234138 None:intergenic 45.0%
CCAATTCTACAATTGTGCGC+AGG + chr3_2:80234133-80234152 None:intergenic 45.0%
CCTGCGCACAATTGTAGAAT+TGG - chr3_2:80234130-80234149 Msa0429050:three_prime_UTR 45.0%
TTATCAGTCGTGCATGTACG+AGG + chr3_2:80234186-80234205 None:intergenic 45.0%
! CTCCTTCTGTGGTTTTCTTC+TGG - chr3_2:80234210-80234229 Msa0429050:three_prime_UTR 45.0%
AAGGATTTCAAAACGGTCCC+AGG + chr3_2:80235181-80235200 None:intergenic 45.0%
TGGCACTATAACTGCCACAA+AGG + chr3_2:80235200-80235219 None:intergenic 45.0%
TTGGTCGTTGTTGACATCAC+AGG - chr3_2:80235465-80235484 Msa0429050:three_prime_UTR 45.0%
!! CCCTAGTGTTGGTTTCTACT+TGG + chr3_2:80235774-80235793 None:intergenic 45.0%
! GCTATGGCACCATGTCATTT+CGG + chr3_2:80235913-80235932 None:intergenic 45.0%
CAATTCATGGCATCACGGTA+TGG + chr3_2:80236132-80236151 None:intergenic 45.0%
ACCGTGATGCCATGAATTGT+TGG - chr3_2:80236133-80236152 Msa0429050:intron 45.0%
AGCGAAAAGACATGAGGTTG+AGG - chr3_2:80236207-80236226 Msa0429050:intron 45.0%
CACTCGTGGGTTTGTATTAG+TGG + chr3_2:80236263-80236282 None:intergenic 45.0%
CAAAAACACGAGAAGCCACA+TGG + chr3_2:80236954-80236973 None:intergenic 45.0%
!! TGAACCCCACAATCTGGTTT+TGG + chr3_2:80237224-80237243 None:intergenic 45.0%
!! CGTTGGGAGAGTGTTATGAA+GGG + chr3_2:80238234-80238253 None:intergenic 45.0%
!! GTTAGCGGATTTGACTGAGT+CGG + chr3_2:80238293-80238312 None:intergenic 45.0%
TTCGTTTGCGAGGTTGTTGA+TGG - chr3_2:80238549-80238568 Msa0429050:intron 45.0%
!! GGCGGATCTGGATTTGTTTT+TGG - chr3_2:80238570-80238589 Msa0429050:intron 45.0%
! TTTGGAATCGGAGTTTAGCG+AGG - chr3_2:80238662-80238681 Msa0429050:intron 45.0%
GGAAGATTAAAGCCATTGCG+AGG - chr3_2:80238713-80238732 Msa0429050:intron 45.0%
AGTCATCATGATCCTCGCAA+TGG + chr3_2:80238728-80238747 None:intergenic 45.0%
! TGACTTGTAAACCGATGTCG+CGG - chr3_2:80238743-80238762 Msa0429050:intron 45.0%
CACCGGAGGAAATTTCTCAT+CGG + chr3_2:80238803-80238822 None:intergenic 45.0%
ATGAGAAATTTCCTCCGGTG+AGG - chr3_2:80238803-80238822 Msa0429050:intron 45.0%
TGAGAAATTTCCTCCGGTGA+GGG - chr3_2:80238804-80238823 Msa0429050:intron 45.0%
! GGGTGTTAGATTTTTCTGGG+GGG - chr3_2:80238824-80238843 Msa0429050:intron 45.0%
ATAGCTGAACTCGTGTGCTA+AGG + chr3_2:80239536-80239555 None:intergenic 45.0%
! TGGGGTCCACTCTTTCTTTT+AGG - chr3_2:80239591-80239610 Msa0429050:intron 45.0%
! GGGGTCCACTCTTTCTTTTA+GGG - chr3_2:80239592-80239611 Msa0429050:intron 45.0%
ACAGGCCCTAAAAGAAAGAG+TGG + chr3_2:80239600-80239619 None:intergenic 45.0%
TCTCAGAAGTGGAACCAAAC+AGG + chr3_2:80239618-80239637 None:intergenic 45.0%
TGATAGAGTTAGTGCCCGTT+TGG + chr3_2:80240030-80240049 None:intergenic 45.0%
CCCGAATAAAATGTAGGGTC+TGG - chr3_2:80240144-80240163 Msa0429050:intron 45.0%
! AGGAGGTAGAACAAGTGTTG+TGG + chr3_2:80240314-80240333 None:intergenic 45.0%
TTGCAGTGAATCATTGGAGG+AGG + chr3_2:80240331-80240350 None:intergenic 45.0%
TCACTGCAATCATCCCTATC+AGG - chr3_2:80240342-80240361 Msa0429050:intron 45.0%
ACCTATGGGAATGGTTTCAC+AGG - chr3_2:80240731-80240750 Msa0429050:intron 45.0%
TCCTGTGAAACCATTCCCAT+AGG + chr3_2:80240735-80240754 None:intergenic 45.0%
! AAAAAAAGGTACATCCGGGC+CGG - chr3_2:80240839-80240858 Msa0429050:intron 45.0%
!! AGCCCGTTTTGAATATGAGC+TGG + chr3_2:80240908-80240927 None:intergenic 45.0%
!! TCAAAACGGGCTTTTTAGCC+CGG - chr3_2:80240916-80240935 Msa0429050:intron 45.0%
ACAATTGTACTCCCACCGTT+TGG + chr3_2:80241377-80241396 None:intergenic 45.0%
! TGGGAGTACAATTGTCTAGG+TGG - chr3_2:80241382-80241401 Msa0429050:intron 45.0%
GAGTACAATTGTCTAGGTGG+TGG - chr3_2:80241385-80241404 Msa0429050:intron 45.0%
! CACAATGGCTGAAGAAGCAT+GGG + chr3_2:80241617-80241636 Msa0429070:CDS 45.0%
!! CTACATTTAAGTTGGCGAGC+AGG - chr3_2:80242005-80242024 Msa0429050:intron 45.0%
! GTTGGATCGTGGCAAAGTTT+TGG - chr3_2:80242540-80242559 Msa0429050:intron 45.0%
GAGGCCAATAACTCTTGTCT+TGG - chr3_2:80242574-80242593 Msa0429050:intron 45.0%
CGCCATTTCCATTGAAGAAC+AGG - chr3_2:80242779-80242798 Msa0429050:intron 45.0%
CGCCATCCAAAATGAAGAAC+AGG - chr3_2:80242902-80242921 Msa0429050:intron 45.0%
! CCCCTGTTCTTCATTTTGGA+TGG + chr3_2:80242907-80242926 None:intergenic 45.0%
!! GTGTGTGTTTGTTGTAGCAG+TGG + chr3_2:80243207-80243226 None:intergenic 45.0%
!! GTTTTGGTGGTTCAGTTGTG+GGG - chr3_2:80243299-80243318 Msa0429050:intron 45.0%
TGTTGCACCGCTTTAGTGTT+CGG - chr3_2:80243328-80243347 Msa0429050:intron 45.0%
GATTGCTCCGAACACTAAAG+CGG + chr3_2:80243338-80243357 None:intergenic 45.0%
CTTTAGTGTTCGGAGCAATC+CGG - chr3_2:80243338-80243357 Msa0429050:intron 45.0%
TTACTCTTCTTGCAACGAGG+AGG + chr3_2:80243395-80243414 None:intergenic 45.0%
!!! GTTTTGAAGGTCCTCAAGGT+TGG + chr3_2:80243430-80243449 None:intergenic 45.0%
! ATGGGAGAGTGTGAATGTGA+GGG + chr3_2:80243585-80243604 None:intergenic 45.0%
! TATGGGAGAGTGTGAATGTG+AGG + chr3_2:80243586-80243605 None:intergenic 45.0%
GGTTTGGGCTAATTAGGGTA+TGG + chr3_2:80243604-80243623 None:intergenic 45.0%
! CTTCGGGTTTGGGCTAATTA+GGG + chr3_2:80243609-80243628 None:intergenic 45.0%
! TCTTCGGGTTTGGGCTAATT+AGG + chr3_2:80243610-80243629 None:intergenic 45.0%
TTAGGGTAGTTAAGGGATCG+GGG - chr3_2:80243916-80243935 Msa0429050:intron 45.0%
TCTATTCGTGCACTAGAGCT+AGG + chr3_2:80243982-80244001 None:intergenic 45.0%
CAGGTTTGAGTAGTAGGCTA+CGG + chr3_2:80244026-80244045 None:intergenic 45.0%
CAATTCATGGCATCACGGTA+TGG + chr3_2:80236132-80236151 None:intergenic 45.0%
ACCGTGATGCCATGAATTGT+TGG - chr3_2:80236133-80236152 Msa0429050:intron 45.0%
AGCGAAAAGACATGAGGTTG+AGG - chr3_2:80236207-80236226 Msa0429050:intron 45.0%
CACTCGTGGGTTTGTATTAG+TGG + chr3_2:80236263-80236282 None:intergenic 45.0%
CTCCGGGACATTGTTTAAAG+AGG + chr3_2:80244812-80244831 None:intergenic 45.0%
CTCTTTAAACAATGTCCCGG+AGG - chr3_2:80244810-80244829 Msa0429050:three_prime_UTR 45.0%
CAAAAACACGAGAAGCCACA+TGG + chr3_2:80236954-80236973 None:intergenic 45.0%
!! TGAACCCCACAATCTGGTTT+TGG + chr3_2:80237224-80237243 None:intergenic 45.0%
!! TGCCTGTAGAAGCACTTAAC+AGG + chr3_2:80246287-80246306 None:intergenic 45.0%
TCTACAGGCACAGAATACTG+TGG - chr3_2:80246297-80246316 Msa0429050:intron 45.0%
!! CGTTGGGAGAGTGTTATGAA+GGG + chr3_2:80238234-80238253 None:intergenic 45.0%
!! GTTAGCGGATTTGACTGAGT+CGG + chr3_2:80238293-80238312 None:intergenic 45.0%
TTCGTTTGCGAGGTTGTTGA+TGG - chr3_2:80238549-80238568 Msa0429050:intron 45.0%
!! GGCGGATCTGGATTTGTTTT+TGG - chr3_2:80238570-80238589 Msa0429050:intron 45.0%
! TTTGGAATCGGAGTTTAGCG+AGG - chr3_2:80238662-80238681 Msa0429050:intron 45.0%
GGAAGATTAAAGCCATTGCG+AGG - chr3_2:80238713-80238732 Msa0429050:intron 45.0%
AGTCATCATGATCCTCGCAA+TGG + chr3_2:80238728-80238747 None:intergenic 45.0%
! TGACTTGTAAACCGATGTCG+CGG - chr3_2:80238743-80238762 Msa0429050:intron 45.0%
CACCGGAGGAAATTTCTCAT+CGG + chr3_2:80238803-80238822 None:intergenic 45.0%
ATGAGAAATTTCCTCCGGTG+AGG - chr3_2:80238803-80238822 Msa0429050:intron 45.0%
TGAGAAATTTCCTCCGGTGA+GGG - chr3_2:80238804-80238823 Msa0429050:intron 45.0%
!! AAATTATAAAATACAAAAAT+TGG - chr3_2:80236899-80236918 Msa0429050:intron 5.0%
!! ATTTATAAATAATAAATAAG+TGG - chr3_2:80239509-80239528 Msa0429050:intron 5.0%
!! AATTAAAACTATAATAATAT+AGG - chr3_2:80240618-80240637 Msa0429050:intron 5.0%
!! TAAAAAATGAAAAAAAAAAA+AGG - chr3_2:80240825-80240844 Msa0429050:intron 5.0%
!! AAAACAAAATTAAATTAAAA+TGG + chr3_2:80242134-80242153 Msa0429070:CDS 5.0%
!! AAAAAAAAAATCTAAAAAAA+TGG - chr3_2:80242751-80242770 Msa0429050:intron 5.0%
!! AAATTATAAAATACAAAAAT+TGG - chr3_2:80236899-80236918 Msa0429050:intron 5.0%
GATTCGCTGTCAGACTGGTA+TGG - chr3_2:80233455-80233474 Msa0429050:three_prime_UTR 50.0%
CTACAAGGATGAGCACAGTC+TGG - chr3_2:80233707-80233726 Msa0429050:three_prime_UTR 50.0%
CAGTCTGGTATTACTTCGGC+AGG - chr3_2:80233722-80233741 Msa0429050:three_prime_UTR 50.0%
GGTGTTTGAGTGGAGGGAAA+AGG + chr3_2:80234691-80234710 None:intergenic 50.0%
GACAGCAGGATCAAGCACAA+TGG + chr3_2:80234770-80234789 None:intergenic 50.0%
TGGATAACTTGAGCGACAGC+AGG + chr3_2:80234784-80234803 None:intergenic 50.0%
! GTGCTAAAGGCGAAGAGCAT+AGG + chr3_2:80235143-80235162 None:intergenic 50.0%
CGTTGTTGACATCACAGGTG+TGG - chr3_2:80235470-80235489 Msa0429050:three_prime_UTR 50.0%
! AATGTGGCGGCGCTTTGTTA+AGG + chr3_2:80235858-80235877 None:intergenic 50.0%
TGTTTCCTTAACCAGTGCCC+CGG + chr3_2:80236545-80236564 None:intergenic 50.0%
! AAACAATGTCCCAGAGGCAC+CGG - chr3_2:80236661-80236680 Msa0429050:intron 50.0%
TCATGTTAACCGGTGCCTCT+GGG + chr3_2:80236673-80236692 None:intergenic 50.0%
AGGAGAAGCAACATCCCATG+TGG - chr3_2:80236936-80236955 Msa0429050:intron 50.0%
ACTACGTGAACCCCACAATC+TGG + chr3_2:80237230-80237249 None:intergenic 50.0%
AGGTCACTGCTGTTAGACAG+CGG + chr3_2:80237630-80237649 None:intergenic 50.0%
TCTACCGGCACAGAATACTG+TGG - chr3_2:80238154-80238173 Msa0429050:intron 50.0%
!! GCGTTGGGAGAGTGTTATGA+AGG + chr3_2:80238235-80238254 None:intergenic 50.0%
CACCAAGCTTTCGCGTTCTT+CGG - chr3_2:80238256-80238275 Msa0429050:intron 50.0%
AAACTCGCAACGAGTGAACG+CGG + chr3_2:80238331-80238350 None:intergenic 50.0%
TTCACCTTGCTCAAGCGAAC+CGG - chr3_2:80238384-80238403 Msa0429050:intron 50.0%
! AGATACGAAGCGGCGTCTTT+TGG - chr3_2:80238490-80238509 Msa0429050:intron 50.0%
AACCTCGCAAACGAAGCCTT+AGG + chr3_2:80238544-80238563 None:intergenic 50.0%
! GTTTGCGAGGTTGTTGATGG+CGG - chr3_2:80238552-80238571 Msa0429050:intron 50.0%
AAATCTAACACCCTCACCGG+AGG + chr3_2:80238817-80238836 None:intergenic 50.0%
! TTTTATTCGGGCTTTCGGGC+CGG + chr3_2:80240135-80240154 None:intergenic 50.0%
CACACACAGTCCCATTTGAG+TGG + chr3_2:80240767-80240786 None:intergenic 50.0%
!! GTCGGGAAACGGGCTTTTTA+GGG + chr3_2:80240942-80240961 None:intergenic 50.0%
TAAAAAGCCCGTTTCCCGAC+CGG - chr3_2:80240942-80240961 Msa0429050:intron 50.0%
AGTAGAGCTGTCAAAACGGG+CGG + chr3_2:80240974-80240993 None:intergenic 50.0%
GCTTGGACTTACCTATGGTG+TGG - chr3_2:80241055-80241074 Msa0429050:intron 50.0%
! CGGTGGGAGTACAATTGTCT+AGG - chr3_2:80241379-80241398 Msa0429050:intron 50.0%
CCACAATGGCTGAAGAAGCA+TGG + chr3_2:80241618-80241637 Msa0429070:CDS 50.0%
CCATGCTTCTTCAGCCATTG+TGG - chr3_2:80241615-80241634 Msa0429050:intron 50.0%
GCCCTGTGTAAGTGTCAACT+AGG - chr3_2:80241681-80241700 Msa0429050:intron 50.0%
AAAGCCTGCAAGTCTGCAGT+GGG + chr3_2:80241954-80241973 Msa0429070:CDS 50.0%
GACGATCCTGCGAATATGAC+CGG - chr3_2:80242416-80242435 Msa0429050:intron 50.0%
ATCTTCGCATGGTTGGATCG+TGG - chr3_2:80242529-80242548 Msa0429050:intron 50.0%
!!! AGTTTTGGACCTTCATGCGG+AGG - chr3_2:80242555-80242574 Msa0429050:intron 50.0%
! AGTTATTGGCCTCCGCATGA+AGG + chr3_2:80242567-80242586 None:intergenic 50.0%
AAAAACCGCCTCCAACCTTG+AGG - chr3_2:80243416-80243435 Msa0429050:intron 50.0%
TTGAAGGTCCTCAAGGTTGG+AGG + chr3_2:80243427-80243446 None:intergenic 50.0%
TAGGGTAGTTAAGGGATCGG+GGG - chr3_2:80243917-80243936 Msa0429050:intron 50.0%
TGTTTCCTTAACCAGTGCCC+CGG + chr3_2:80236545-80236564 None:intergenic 50.0%
AGGAGAAGCAACATCCCATG+TGG - chr3_2:80236936-80236955 Msa0429050:intron 50.0%
ACTACGTGAACCCCACAATC+TGG + chr3_2:80237230-80237249 None:intergenic 50.0%
AGGTCACTGCTGTTAGACAG+CGG + chr3_2:80237630-80237649 None:intergenic 50.0%
!! GCGTTGGGAGAGTGTTATGA+AGG + chr3_2:80238235-80238254 None:intergenic 50.0%
CACCAAGCTTTCGCGTTCTT+CGG - chr3_2:80238256-80238275 Msa0429050:intron 50.0%
AAACTCGCAACGAGTGAACG+CGG + chr3_2:80238331-80238350 None:intergenic 50.0%
TTCACCTTGCTCAAGCGAAC+CGG - chr3_2:80238384-80238403 Msa0429050:intron 50.0%
! AGATACGAAGCGGCGTCTTT+TGG - chr3_2:80238490-80238509 Msa0429050:intron 50.0%
AACCTCGCAAACGAAGCCTT+AGG + chr3_2:80238544-80238563 None:intergenic 50.0%
! GTTTGCGAGGTTGTTGATGG+CGG - chr3_2:80238552-80238571 Msa0429050:intron 50.0%
AAATCTAACACCCTCACCGG+AGG + chr3_2:80238817-80238836 None:intergenic 50.0%
TTTCCACGTTGCCCGTCAAC+AGG + chr3_2:80233293-80233312 None:intergenic 55.0%
TCGCTGTCAGACTGGTATGG+TGG - chr3_2:80233458-80233477 Msa0429050:three_prime_UTR 55.0%
AGCGACTCTAGCGATCTGAG+AGG + chr3_2:80235060-80235079 None:intergenic 55.0%
!! CGGTGTTTCTTGGCTTTGGC+AGG + chr3_2:80235893-80235912 None:intergenic 55.0%
TTAACCAATGTCCGGGGCAC+TGG - chr3_2:80236531-80236550 Msa0429050:intron 55.0%
TTAACCAGTGCCCCGGACAT+TGG + chr3_2:80236538-80236557 None:intergenic 55.0%
!! AATGTCCGGGGCACTGGTTA+AGG - chr3_2:80236537-80236556 Msa0429050:intron 55.0%
GTCATGTTAACCGGTGCCTC+TGG + chr3_2:80236674-80236693 None:intergenic 55.0%
!! GCGAAAGCTTGGTGTGCGTT+GGG + chr3_2:80238250-80238269 None:intergenic 55.0%
GTCCGAAGAACGCGAAAGCT+TGG + chr3_2:80238261-80238280 None:intergenic 55.0%
!! ACGAGTTGACTCGGCGTTAG+CGG + chr3_2:80238308-80238327 None:intergenic 55.0%
! TGAACGCGGACGAGTTGACT+CGG + chr3_2:80238317-80238336 None:intergenic 55.0%
TCGCTTGAGCAAGGTGAACG+TGG + chr3_2:80238382-80238401 None:intergenic 55.0%
! GGCGTCGAGTGATTCAAGAG+CGG - chr3_2:80238426-80238445 Msa0429050:intron 55.0%
!!! CGCTTTTTCGGCTTCGCCTA+AGG - chr3_2:80238525-80238544 Msa0429050:intron 55.0%
!! GAGGTTGTTGATGGCGGATC+TGG - chr3_2:80238558-80238577 Msa0429050:intron 55.0%
! GCAAAGCGTCACTTCGTACG+TGG + chr3_2:80238625-80238644 None:intergenic 55.0%
GTGGAATTCCGTGCATGCTG+AGG - chr3_2:80238692-80238711 Msa0429050:intron 55.0%
CAAGCGATGTACCGCGACAT+CGG + chr3_2:80238757-80238776 None:intergenic 55.0%
GTAGAGCTGTCAAGATGGGC+CGG - chr3_2:80240099-80240118 Msa0429050:intron 55.0%
TAGAGCTGTCAAGATGGGCC+GGG - chr3_2:80240100-80240119 Msa0429050:intron 55.0%
!!! AAACGGGCTGCGGGCTTTTT+CGG + chr3_2:80240216-80240235 None:intergenic 55.0%
AAAAAGCCCGCAGCCCGTTT+GGG - chr3_2:80240216-80240235 Msa0429050:intron 55.0%
TATGGAGCCCGAGCCCTATA+CGG + chr3_2:80240882-80240901 None:intergenic 55.0%
!!! GAAACGGGCTTTTTAGGGCC+GGG + chr3_2:80240937-80240956 None:intergenic 55.0%
!!! GGAAACGGGCTTTTTAGGGC+CGG + chr3_2:80240938-80240957 None:intergenic 55.0%
!! GGTCGGGAAACGGGCTTTTT+AGG + chr3_2:80240943-80240962 None:intergenic 55.0%
ACACTTACACAGGGCCCTCA+AGG + chr3_2:80241676-80241695 Msa0429070:CDS 55.0%
ACAACCCACTGCAGACTTGC+AGG - chr3_2:80241947-80241966 Msa0429050:intron 55.0%
CAAAGCCTGCAAGTCTGCAG+TGG + chr3_2:80241955-80241974 Msa0429070:CDS 55.0%
CCAAGACCGGTCATATTCGC+AGG + chr3_2:80242425-80242444 None:intergenic 55.0%
CCTGCGAATATGACCGGTCT+TGG - chr3_2:80242422-80242441 Msa0429050:intron 55.0%
AAGGTCCTCAAGGTTGGAGG+CGG + chr3_2:80243424-80243443 None:intergenic 55.0%
GCGGCGTGTGGAACAAACAT+AGG + chr3_2:80243537-80243556 None:intergenic 55.0%
GATTCTGTTCCTAGCGGCAG+CGG + chr3_2:80243556-80243575 None:intergenic 55.0%
GTAGTAGGCTACGGAGAGTG+AGG + chr3_2:80244017-80244036 None:intergenic 55.0%
TTAACCAATGTCCGGGGCAC+TGG - chr3_2:80236531-80236550 Msa0429050:intron 55.0%
TTAACCAGTGCCCCGGACAT+TGG + chr3_2:80236538-80236557 None:intergenic 55.0%
!! AATGTCCGGGGCACTGGTTA+AGG - chr3_2:80236537-80236556 Msa0429050:intron 55.0%
! AAACAATGTCCCGGAGGCAC+CGG - chr3_2:80244816-80244835 Msa0429050:three_prime_UTR 55.0%
TCATGTTAACCGGTGCCTCC+GGG + chr3_2:80244828-80244847 None:intergenic 55.0%
GTCATGTTAACCGGTGCCTC+CGG + chr3_2:80236674-80236693 None:intergenic 55.0%
!! GCGAAAGCTTGGTGTGCGTT+GGG + chr3_2:80238250-80238269 None:intergenic 55.0%
GTCCGAAGAACGCGAAAGCT+TGG + chr3_2:80238261-80238280 None:intergenic 55.0%
!! ACGAGTTGACTCGGCGTTAG+CGG + chr3_2:80238308-80238327 None:intergenic 55.0%
! TGAACGCGGACGAGTTGACT+CGG + chr3_2:80238317-80238336 None:intergenic 55.0%
TCGCTTGAGCAAGGTGAACG+TGG + chr3_2:80238382-80238401 None:intergenic 55.0%
! GGCGTCGAGTGATTCAAGAG+CGG - chr3_2:80238426-80238445 Msa0429050:intron 55.0%
!!! CGCTTTTTCGGCTTCGCCTA+AGG - chr3_2:80238525-80238544 Msa0429050:intron 55.0%
!! GAGGTTGTTGATGGCGGATC+TGG - chr3_2:80238558-80238577 Msa0429050:intron 55.0%
! GCAAAGCGTCACTTCGTACG+TGG + chr3_2:80238625-80238644 None:intergenic 55.0%
GTGGAATTCCGTGCATGCTG+AGG - chr3_2:80238692-80238711 Msa0429050:intron 55.0%
CAAGCGATGTACCGCGACAT+CGG + chr3_2:80238757-80238776 None:intergenic 55.0%
! GAACCTGTTGACGGGCAACG+TGG - chr3_2:80233287-80233306 Msa0429050:intron 60.0%
GGCGCCACAGTATTCTGTGC+CGG + chr3_2:80238161-80238180 None:intergenic 60.0%
!! CGCGAAAGCTTGGTGTGCGT+TGG + chr3_2:80238251-80238270 None:intergenic 60.0%
ACCTTGCTCAAGCGAACCGG+CGG - chr3_2:80238387-80238406 Msa0429050:intron 60.0%
CGCCTAAGGCTTCGTTTGCG+AGG - chr3_2:80238539-80238558 Msa0429050:intron 60.0%
TCAAGATGGGCCGGGTCGTA+CGG - chr3_2:80240108-80240127 Msa0429050:intron 60.0%
!!! AACGGGCTGCGGGCTTTTTC+GGG + chr3_2:80240215-80240234 None:intergenic 60.0%
GAAAAAGCCCGCAGCCCGTT+TGG - chr3_2:80240215-80240234 Msa0429050:intron 60.0%
TATACGGGCTCCCGGGCTAA+CGG + chr3_2:80240866-80240885 None:intergenic 60.0%
TTAGCCCGGGAGCCCGTATA+GGG - chr3_2:80240866-80240885 Msa0429050:intron 60.0%
ATGGAGCCCGAGCCCTATAC+GGG + chr3_2:80240881-80240900 None:intergenic 60.0%
GGCTACGGAGAGTGAGGTCA+AGG + chr3_2:80244011-80244030 None:intergenic 60.0%
!! CGCGAAAGCTTGGTGTGCGT+TGG + chr3_2:80238251-80238270 None:intergenic 60.0%
ACCTTGCTCAAGCGAACCGG+CGG - chr3_2:80238387-80238406 Msa0429050:intron 60.0%
CGCCTAAGGCTTCGTTTGCG+AGG - chr3_2:80238539-80238558 Msa0429050:intron 60.0%
CAAGATGGGCCGGGTCGTAC+GGG - chr3_2:80240109-80240128 Msa0429050:intron 65.0%
!!! GCTGCGGGCTTTTTCGGGTC+GGG + chr3_2:80240210-80240229 None:intergenic 65.0%
!!! GGCTGCGGGCTTTTTCGGGT+CGG + chr3_2:80240211-80240230 None:intergenic 65.0%
ATACGGGCTCCCGGGCTAAC+GGG + chr3_2:80240865-80240884 None:intergenic 65.0%
GTTAGCCCGGGAGCCCGTAT+AGG - chr3_2:80240865-80240884 Msa0429050:intron 65.0%
TCAAAACGGGCGGCCCAGTC+CGG + chr3_2:80240964-80240983 None:intergenic 65.0%
TAAGGGATCGGGGGACTGCG+AGG - chr3_2:80243926-80243945 Msa0429050:intron 65.0%
!! GCCGCCGGTTCGCTTGAGCA+AGG + chr3_2:80238391-80238410 None:intergenic 70.0%
TCAAGCGAACCGGCGGCGAG+AGG - chr3_2:80238394-80238413 Msa0429050:intron 70.0%
GCGTTGTCTCCTCTCGCCGC+CGG + chr3_2:80238406-80238425 None:intergenic 70.0%
GGCGGCGAGAGGAGACAACG+CGG - chr3_2:80238405-80238424 Msa0429050:intron 70.0%
AGCGTGGCGGCTGCCGTCTA+AGG + chr3_2:80238929-80238948 None:intergenic 70.0%
!! CCGAAGCCCAAACGGGCTGC+GGG + chr3_2:80240225-80240244 None:intergenic 70.0%
CCCGCAGCCCGTTTGGGCTT+CGG - chr3_2:80240222-80240241 Msa0429050:intron 70.0%
!! CCCGAAGCCCAAACGGGCTG+CGG + chr3_2:80240226-80240245 None:intergenic 70.0%
CCGCAGCCCGTTTGGGCTTC+GGG - chr3_2:80240223-80240242 Msa0429050:intron 70.0%
CAGCCCGTTTGGGCTTCGGG+CGG - chr3_2:80240226-80240245 Msa0429050:intron 70.0%
CGAGCCCTATACGGGCTCCC+GGG + chr3_2:80240873-80240892 None:intergenic 70.0%
CCGAGCCCTATACGGGCTCC+CGG + chr3_2:80240874-80240893 None:intergenic 70.0%
CCGGGAGCCCGTATAGGGCT+CGG - chr3_2:80240871-80240890 Msa0429050:intron 70.0%
CGGGAGCCCGTATAGGGCTC+GGG - chr3_2:80240872-80240891 Msa0429050:intron 70.0%
AGCCCGTTTCCCGACCGGAC+TGG - chr3_2:80240947-80240966 Msa0429050:intron 70.0%
GCCCGTTTCCCGACCGGACT+GGG - chr3_2:80240948-80240967 Msa0429050:intron 70.0%
GCCCAGTCCGGTCGGGAAAC+GGG + chr3_2:80240952-80240971 None:intergenic 70.0%
GGCCCAGTCCGGTCGGGAAA+CGG + chr3_2:80240953-80240972 None:intergenic 70.0%
TTCCACACGCCGCTGCCGCT+AGG - chr3_2:80243544-80243563 Msa0429050:intron 70.0%
TTCCTAGCGGCAGCGGCGTG+TGG + chr3_2:80243549-80243568 None:intergenic 70.0%
!! GCCGCCGGTTCGCTTGAGCA+AGG + chr3_2:80238391-80238410 None:intergenic 70.0%
TCAAGCGAACCGGCGGCGAG+AGG - chr3_2:80238394-80238413 Msa0429050:intron 70.0%
GCGTTGTCTCCTCTCGCCGC+CGG + chr3_2:80238406-80238425 None:intergenic 70.0%
GGCGGCGAGAGGAGACAACG+CGG - chr3_2:80238405-80238424 Msa0429050:intron 70.0%
AGCGTGGCGGCTGCCGTCTA+AGG + chr3_2:80238929-80238948 None:intergenic 70.0%
ATGGGCCGGGTCGTACGGGC+CGG - chr3_2:80240113-80240132 Msa0429050:intron 75.0%
GGGCCGCCCGAAGCCCAAAC+GGG + chr3_2:80240232-80240251 None:intergenic 75.0%
CGGGCCGCCCGAAGCCCAAA+CGG + chr3_2:80240233-80240252 None:intergenic 75.0%
AACGGGCGGCCCAGTCCGGT+CGG + chr3_2:80240960-80240979 None:intergenic 75.0%
! TCGGGCCGGCCCGTACGACC+CGG + chr3_2:80240121-80240140 None:intergenic 80.0%
! TCCGGGCCGGCCCGTTAGCC+CGG - chr3_2:80240852-80240871 Msa0429050:intron 80.0%
!! GGGCTCCCGGGCTAACGGGC+CGG + chr3_2:80240861-80240880 None:intergenic 80.0%
! ACGGGCGGCCCAGTCCGGTC+GGG + chr3_2:80240959-80240978 None:intergenic 80.0%
!! CCCGGGCTAACGGGCCGGCC+CGG + chr3_2:80240856-80240875 None:intergenic 85.0%
! CCGGGCCGGCCCGTTAGCCC+GGG - chr3_2:80240853-80240872 Msa0429050:intron 85.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 80233149 80247138 80233149 ID=Msa0429050;Name=Msa0429050
chr3_2 mRNA 80233149 80247138 80233149 ID=Msa0429050-mRNA-1;Parent=Msa0429050;Name=Msa0429050-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0.66|0.71|1|0.33|0.42|7|3601|350
chr3_2 exon 80233149 80233301 80233149 ID=Msa0429050-mRNA-1:exon:21902;Parent=Msa0429050-mRNA-1
chr3_2 exon 80233323 80235976 80233323 ID=Msa0429050-mRNA-1:exon:21901;Parent=Msa0429050-mRNA-1
chr3_2 exon 80244125 80245304 80244125 ID=Msa0429050-mRNA-1:exon:21900;Parent=Msa0429050-mRNA-1
chr3_2 exon 80245637 80245820 80245637 ID=Msa0429050-mRNA-1:exon:21899;Parent=Msa0429050-mRNA-1
chr3_2 exon 80246544 80246724 80246544 ID=Msa0429050-mRNA-1:exon:21898;Parent=Msa0429050-mRNA-1
chr3_2 exon 80246825 80247012 80246825 ID=Msa0429050-mRNA-1:exon:21897;Parent=Msa0429050-mRNA-1
chr3_2 exon 80247025 80247138 80247025 ID=Msa0429050-mRNA-1:exon:21896;Parent=Msa0429050-mRNA-1
chr3_2 CDS 80247025 80247138 80247025 ID=Msa0429050-mRNA-1:cds;Parent=Msa0429050-mRNA-1
chr3_2 CDS 80246825 80247012 80246825 ID=Msa0429050-mRNA-1:cds;Parent=Msa0429050-mRNA-1
chr3_2 CDS 80246544 80246724 80246544 ID=Msa0429050-mRNA-1:cds;Parent=Msa0429050-mRNA-1
chr3_2 CDS 80245637 80245820 80245637 ID=Msa0429050-mRNA-1:cds;Parent=Msa0429050-mRNA-1
chr3_2 CDS 80244919 80245304 80244919 ID=Msa0429050-mRNA-1:cds;Parent=Msa0429050-mRNA-1
chr3_2 three_prime_UTR 80244125 80244918 80244125 ID=Msa0429050-mRNA-1:three_prime_utr;Parent=Msa0429050-mRNA-1
chr3_2 three_prime_UTR 80233323 80235976 80233323 ID=Msa0429050-mRNA-1:three_prime_utr;Parent=Msa0429050-mRNA-1
chr3_2 three_prime_UTR 80233149 80233301 80233149 ID=Msa0429050-mRNA-1:three_prime_utr;Parent=Msa0429050-mRNA-1
Gene Sequence

>Msa0429050

ATGGAGCTCAAACTATCGAAAACCTATTCTATAGAGATCACCGTTGGACATTCTACGGGTATTTTATCTTCAAATGGATATCATTATGGGGATCCTTCCCAAATTACTTTTGAAACTGCTCATACAGAACCTGTTGACGGGCAACGTGGAAAGTTGACTTCATGGAAGGACAATGATTTCCGAAAAATTGATCATTTTGAAGAATCAAATTCCGCTGTATCTACTAATCACCATATTCCAACAACTTCCAATTGGTGCATGGAGGCAATTGATCAAGAAATAACTAATTTTCAAGATTCGCTTAAAATTAGAAAGCTTACACTTGCAAGACTTTTCACTGCTCTTGATTTGTTATCACCCCAACATGATAAAAGAAAAAATCATACCGAAGAAGTTCTCAAGCTTTACACCGAGCTGATGAAGTTGGATCCAACACATTCTCTATACTACAAGGATGAGCACAGTCTGGTATTACTTCGGCAGATAACTTCATCTAGAGAGTCTTTACTACCATATTGCCACTACTATAAAGACGCATCAGAAACAAATACTAGTTATGTGTGTCTACGGTTACAAAATCTATCATTGTCACGAATGGGGTCTTTTGAGAATTTACTGTGGGTGCAAATGCTCGACCTTAGCCACAATGAACTTCGATCAATTGAAGGGTTGGAGGCCATGCAACTTCTATCTTGTTTAAATCTGAGTCATAATAAACTTGGTAGTTTTACTGCTTTGGGGCCTCTCAGATCGCTAGAGTCGCTTAAAGTGTTGAATATTTCTTGCAATGAGCTAGGCTCTCACTCAATTGACACGAGACGATACCTATGCTCTTCGCCTTTAGCACATACTGAAGTATTTGCCTGGGACCGTTTTGAAATCCTTTGTGGCAGTTATAGTGCCACTAAGTTTTGGGAAGCTTTCTTGATATTTGAAAGCTTGAACTTGACTGATTTGAACATATCAGGAAATGCAGTCGCTGATGAGAACTTCACGTCATTTATTGTCAAAGTTTTGCCTACTCTGAAGTGCTTAAATGATGAAGAGTTATAG
Protein sequence

>Msa0429050

MELKLSKTYSIEITVGHSTGILSSNGYHYGDPSQITFETAHTEPVDGQRGKLTSWKDNDFRKIDHFEESNSAVSTNHHIPTTSNWCMEAIDQEITNFQDSLKIRKLTLARLFTALDLLSPQHDKRKNHTEEVLKLYTELMKLDPTHSLYYKDEHSLVLLRQITSSRESLLPYCHYYKDASETNTSYVCLRLQNLSLSRMGSFENLLWVQMLDLSHNELRSIEGLEAMQLLSCLNLSHNKLGSFTALGPLRSLESLKVLNISCNELGSHSIDTRRYLCSSPLAHTEVFAWDRFEILCGSYSATKFWEAFLIFESLNLTDLNISGNAVADENFTSFIVKVLPTLKCLNDEEL*