AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0257930

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0257930 MtrunA17_Chr2g0319961 95.402 261 12 0 1 261 1 261 2.63e-170 470
Msa0257930 MtrunA17_Chr8g0379461 53.659 205 65 7 50 247 45 226 2.68e-61 193
Msa0257930 MtrunA17_Chr2g0284321 51.741 201 74 6 48 245 8 188 1.04e-57 183
Msa0257930 MtrunA17_Chr2g0293481 61.386 101 38 1 50 150 238 337 1.88e-35 132
Msa0257930 MtrunA17_Chr7g0248691 54.206 107 38 1 44 150 129 224 2.51e-32 120
Msa0257930 MtrunA17_Chr7g0270051 50.000 132 48 5 50 180 25 139 2.05e-31 117
Msa0257930 MtrunA17_Chr5g0401821 51.961 102 33 2 50 146 175 265 1.12e-28 110
Msa0257930 MtrunA17_Chr8g0348311 50.962 104 40 1 47 150 133 225 5.36e-28 109
Msa0257930 MtrunA17_Chr8g0387501 61.905 84 31 1 81 163 130 213 2.57e-27 106
Msa0257930 MtrunA17_Chr4g0053281 58.242 91 31 3 50 139 241 325 3.38e-27 107
Msa0257930 MtrunA17_Chr4g0071521 54.255 94 27 2 50 138 221 303 6.81e-27 106
Msa0257930 MtrunA17_Chr1g0147881 55.556 90 34 2 50 139 238 321 8.88e-27 106
Msa0257930 MtrunA17_Chr1g0202461 44.915 118 55 1 40 157 231 338 5.22e-26 105
Msa0257930 MtrunA17_Chr1g0184691 52.174 92 28 2 52 138 271 351 1.56e-24 100
Msa0257930 MtrunA17_Chr7g0228941 63.333 60 22 0 79 138 51 110 3.88e-24 94.0
Msa0257930 MtrunA17_Chr3g0139021 49.438 89 34 1 50 138 295 372 1.17e-23 98.6
Msa0257930 MtrunA17_Chr2g0289181 59.677 62 25 0 79 140 13 74 6.12e-22 91.3
Msa0257930 MtrunA17_Chr7g0270831 42.276 123 56 3 38 160 183 290 4.28e-20 89.0
Msa0257930 MtrunA17_Chr3g0099641 45.977 87 46 1 71 156 242 328 1.58e-19 87.4
Msa0257930 MtrunA17_Chr2g0288871 54.286 70 32 0 71 140 296 365 1.04e-18 85.1
Msa0257930 MtrunA17_Chr4g0051881 45.745 94 47 3 81 174 179 268 1.15e-18 84.0
Msa0257930 MtrunA17_Chr4g0025061 41.489 94 55 0 71 164 351 444 1.18e-18 85.1
Msa0257930 MtrunA17_Chr2g0322391 51.429 70 34 0 71 140 340 409 4.91e-18 83.2
Msa0257930 MtrunA17_Chr4g0051181 52.113 71 34 0 71 141 234 304 5.10e-18 83.2
Msa0257930 MtrunA17_Chr7g0218081 35.119 168 85 6 13 160 327 490 5.25e-18 83.2
Msa0257930 MtrunA17_Chr7g0218081 46.970 66 33 2 78 143 226 289 8.80e-12 64.7
Msa0257930 MtrunA17_Chr4g0075201 37.008 127 62 3 18 140 215 327 6.12e-18 82.8
Msa0257930 MtrunA17_Chr4g0025051 40.426 94 56 0 71 164 326 419 7.88e-18 82.8
Msa0257930 MtrunA17_Chr7g0263531 49.333 75 37 1 81 155 362 435 9.21e-18 82.0
Msa0257930 MtrunA17_Chr7g0263531 45.946 74 38 2 78 151 187 258 1.20e-13 70.1
Msa0257930 MtrunA17_Chr4g0060271 52.113 71 34 0 71 141 246 316 1.19e-17 82.4
Msa0257930 MtrunA17_Chr4g0042831 38.095 105 55 2 41 145 248 342 2.21e-17 80.9
Msa0257930 MtrunA17_Chr4g0042831 35.632 87 55 1 81 167 146 231 2.23e-11 63.2
Msa0257930 MtrunA17_Chr5g0418191 50.769 65 31 1 81 145 321 384 3.48e-17 80.5
Msa0257930 MtrunA17_Chr5g0418191 48.485 66 32 2 78 143 149 212 1.09e-13 70.1
Msa0257930 MtrunA17_Chr4g0074001 38.889 108 60 3 44 146 318 424 4.25e-17 80.5
Msa0257930 MtrunA17_Chr5g0443131 56.667 60 25 1 81 140 158 216 5.25e-17 79.0
Msa0257930 MtrunA17_Chr5g0445311 50.000 64 31 1 81 144 365 427 9.78e-17 79.3
Msa0257930 MtrunA17_Chr5g0418781 39.167 120 63 4 37 151 85 199 1.28e-16 77.4
Msa0257930 MtrunA17_Chr2g0302391 55.000 60 27 0 81 140 212 271 1.86e-16 78.6
Msa0257930 MtrunA17_Chr3g0101131 35.374 147 85 7 12 151 341 484 2.29e-16 78.6
Msa0257930 MtrunA17_Chr4g0024391 38.835 103 58 2 71 170 220 320 3.67e-16 77.8
Msa0257930 MtrunA17_Chr7g0249311 34.848 132 76 4 81 207 393 519 4.18e-16 77.8
Msa0257930 MtrunA17_Chr7g0249311 50.000 60 28 2 81 140 180 237 1.97e-11 63.9
Msa0257930 MtrunA17_Chr3g0136961 42.045 88 46 1 81 163 139 226 4.39e-16 76.3
Msa0257930 MtrunA17_Chr7g0216891 44.444 81 45 0 71 151 210 290 5.34e-16 77.4
Msa0257930 MtrunA17_Chr1g0150281 52.632 57 27 0 81 137 141 197 1.80e-15 74.3
Msa0257930 MtrunA17_Chr7g0270191 35.965 114 55 3 81 194 146 241 2.87e-15 73.9
Msa0257930 MtrunA17_Chr3g0129321 32.787 122 73 2 51 172 89 201 3.31e-15 72.4
Msa0257930 MtrunA17_Chr6g0485431 52.381 63 28 2 80 141 154 215 3.81e-15 74.3
Msa0257930 MtrunA17_Chr8g0383251 42.683 82 45 2 71 152 99 178 4.81e-15 71.2
Msa0257930 MtrunA17_Chr7g0238921 57.895 57 23 1 81 137 125 180 5.02e-15 73.6
Msa0257930 MtrunA17_Chr3g0079691 48.438 64 32 1 81 144 496 558 5.86e-15 74.3
Msa0257930 MtrunA17_Chr3g0079691 43.333 90 48 3 78 167 278 364 6.06e-14 71.2
Msa0257930 MtrunA17_Chr3g0106491 49.206 63 31 1 81 143 366 427 8.60e-15 73.6
Msa0257930 MtrunA17_Chr1g0194481 50.877 57 27 1 81 137 159 214 9.47e-15 72.8
Msa0257930 MtrunA17_Chr5g0447701 41.975 81 46 1 80 160 252 331 9.81e-15 73.2
Msa0257930 MtrunA17_Chr4g0004911 49.206 63 31 1 81 143 337 398 1.44e-14 73.2
Msa0257930 MtrunA17_Chr7g0249301 49.206 63 31 1 81 143 293 354 1.65e-14 72.4
Msa0257930 MtrunA17_Chr7g0249301 51.667 60 27 2 81 140 63 120 1.17e-12 67.0
Msa0257930 MtrunA17_Chr4g0068541 42.254 71 40 1 71 141 199 268 4.21e-14 71.6
Msa0257930 MtrunA17_Chr7g0275531 45.455 88 42 3 50 135 92 175 5.59e-14 70.5
Msa0257930 MtrunA17_Chr5g0432161 36.154 130 57 5 17 143 377 483 6.19e-14 71.2
Msa0257930 MtrunA17_Chr1g0188941 45.161 62 33 1 81 142 52 112 7.22e-14 66.2
Msa0257930 MtrunA17_Chr4g0001361 48.333 60 31 0 81 140 163 222 7.62e-14 70.1
Msa0257930 MtrunA17_Chr3g0126391 38.532 109 53 3 33 135 90 190 7.64e-14 70.5
Msa0257930 MtrunA17_Chr1g0150271 43.939 66 37 0 75 140 96 161 1.25e-13 68.9
Msa0257930 MtrunA17_Chr1g0150801 37.736 106 54 3 34 137 63 158 1.71e-13 66.6
Msa0257930 MtrunA17_Chr2g0294231 48.333 60 30 1 81 140 204 262 4.48e-13 68.2
Msa0257930 MtrunA17_Chr2g0333851 46.667 60 32 0 81 140 170 229 4.66e-13 67.8
Msa0257930 MtrunA17_Chr7g0243891 46.032 63 33 1 81 143 375 436 8.41e-13 67.8
Msa0257930 MtrunA17_Chr7g0224801 32.000 125 79 3 23 144 33 154 2.02e-12 63.9
Msa0257930 MtrunA17_Chr1g0189391 54.237 59 25 2 81 138 98 155 2.86e-12 65.9
Msa0257930 MtrunA17_Chr8g0387981 33.613 119 69 2 27 135 71 189 3.00e-12 65.9
Msa0257930 MtrunA17_Chr8g0347251 35.514 107 54 4 46 140 100 203 4.80e-12 65.1
Msa0257930 MtrunA17_Chr5g0431811 30.189 159 84 6 40 174 629 784 6.58e-12 65.5
Msa0257930 MtrunA17_Chr8g0335811 39.286 84 49 2 71 154 145 226 1.47e-11 62.4
Msa0257930 MtrunA17_Chr8g0383351 46.552 58 30 1 81 138 161 217 1.50e-11 62.8
Msa0257930 MtrunA17_Chr3g0129361 46.552 58 30 1 81 138 145 201 2.94e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0257930 AT3G58710.2 51.953 256 83 7 26 256 16 256 3.41e-76 233
Msa0257930 AT3G58710.1 51.751 257 83 8 26 256 16 257 1.99e-74 228
Msa0257930 AT1G29280.1 47.718 241 103 6 26 249 15 249 4.97e-62 196
Msa0257930 AT2G34830.2 47.368 171 69 5 37 188 178 346 3.80e-37 136
Msa0257930 AT2G34830.1 47.368 171 69 5 37 188 169 337 4.11e-37 135
Msa0257930 AT1G30650.1 64.211 95 33 1 50 144 188 281 1.36e-35 132
Msa0257930 AT4G01250.1 45.926 135 58 2 21 150 74 198 2.46e-29 112
Msa0257930 AT5G45050.2 42.759 145 63 3 43 175 1123 1259 5.41e-29 115
Msa0257930 AT5G45050.1 42.759 145 63 3 43 175 1151 1287 5.58e-29 115
Msa0257930 AT5G45050.4 42.759 145 63 3 43 175 1012 1148 6.39e-29 115
Msa0257930 AT4G23550.1 63.158 76 28 0 80 155 140 215 2.76e-28 110
Msa0257930 AT5G52830.1 49.600 125 47 3 80 191 165 286 6.91e-28 109
Msa0257930 AT4G24240.1 53.608 97 29 2 50 141 257 342 4.13e-27 107
Msa0257930 AT2G23320.1 54.444 90 35 2 50 139 216 299 7.89e-27 106
Msa0257930 AT2G30590.1 53.763 93 27 2 50 137 289 370 6.17e-26 105
Msa0257930 AT4G31550.2 53.191 94 28 2 50 138 221 303 1.32e-25 103
Msa0257930 AT4G31550.1 52.128 94 29 2 50 138 222 304 7.29e-25 101
Msa0257930 AT5G28650.1 52.577 97 30 2 50 141 238 323 1.72e-24 100
Msa0257930 AT3G04670.1 52.577 97 30 2 50 141 238 323 2.56e-24 99.8
Msa0257930 AT2G24570.1 49.505 101 35 2 50 145 219 308 2.84e-24 99.8
Msa0257930 AT5G45260.1 42.520 127 53 5 37 155 1171 1285 7.87e-22 95.1
Msa0257930 AT4G30935.1 38.596 114 62 3 39 146 285 396 9.42e-21 91.3
Msa0257930 AT4G04450.2 45.745 94 51 0 71 164 189 282 1.53e-19 87.8
Msa0257930 AT4G04450.1 45.745 94 51 0 71 164 283 376 2.31e-19 87.4
Msa0257930 AT5G15130.1 49.438 89 40 1 71 159 218 301 3.28e-19 87.0
Msa0257930 AT5G15130.2 49.438 89 40 1 71 159 176 259 3.74e-19 87.0
Msa0257930 AT1G68150.1 46.988 83 44 0 71 153 226 308 6.92e-19 85.5
Msa0257930 AT4G22070.4 52.857 70 33 0 71 140 288 357 1.60e-18 85.1
Msa0257930 AT4G22070.3 52.857 70 33 0 71 140 288 357 1.60e-18 85.1
Msa0257930 AT4G22070.2 52.857 70 33 0 71 140 288 357 1.60e-18 85.1
Msa0257930 AT4G22070.1 52.857 70 33 0 71 140 288 357 1.60e-18 85.1
Msa0257930 AT1G62300.1 36.957 138 67 3 3 140 255 372 2.19e-18 84.7
Msa0257930 AT2G04880.1 59.016 61 24 1 80 140 307 366 5.00e-18 83.6
Msa0257930 AT2G04880.2 59.016 61 24 1 80 140 283 342 5.04e-18 83.6
Msa0257930 AT5G26170.1 51.471 68 32 1 71 138 104 170 6.78e-18 79.3
Msa0257930 AT5G46350.1 47.619 84 38 2 81 164 184 261 7.12e-18 82.0
Msa0257930 AT2G37260.3 40.952 105 56 2 37 141 231 329 9.67e-18 82.0
Msa0257930 AT2G37260.3 48.649 74 33 3 81 151 86 157 2.51e-12 66.2
Msa0257930 AT2G37260.2 40.952 105 56 2 37 141 229 327 1.08e-17 81.6
Msa0257930 AT2G37260.2 48.649 74 33 3 81 151 84 155 2.71e-12 66.2
Msa0257930 AT2G37260.1 40.952 105 56 2 37 141 311 409 1.12e-17 82.4
Msa0257930 AT2G37260.1 48.649 74 33 3 81 151 166 237 1.78e-12 67.0
Msa0257930 AT1G13960.1 38.281 128 59 4 13 140 361 468 3.41e-17 81.3
Msa0257930 AT1G13960.1 49.206 63 30 2 78 140 227 287 6.16e-13 68.6
Msa0257930 AT1G13960.2 38.281 128 59 4 13 140 208 315 3.66e-17 80.5
Msa0257930 AT1G13960.2 49.206 63 30 2 78 140 74 134 5.00e-13 68.6
Msa0257930 AT4G01720.1 51.429 70 34 0 71 140 230 299 3.74e-17 80.9
Msa0257930 AT4G18170.1 56.667 60 25 1 81 140 173 231 4.47e-17 79.7
Msa0257930 AT3G62340.1 42.222 90 45 2 52 141 96 178 5.69e-17 79.0
Msa0257930 AT1G18860.1 52.857 70 33 0 71 140 230 299 1.44e-16 79.3
Msa0257930 AT1G29860.1 55.000 60 26 1 81 140 137 195 1.64e-16 77.8
Msa0257930 AT5G49520.1 51.515 66 30 2 81 145 222 286 2.38e-16 78.2
Msa0257930 AT1G69810.1 47.297 74 38 1 80 152 203 276 3.68e-16 77.8
Msa0257930 AT4G26640.5 32.759 116 67 2 81 186 206 320 4.28e-16 77.4
Msa0257930 AT4G26640.6 32.759 116 67 2 81 186 206 320 4.28e-16 77.4
Msa0257930 AT4G26640.4 32.759 116 67 2 81 186 206 320 4.28e-16 77.4
Msa0257930 AT4G26640.3 32.759 116 67 2 81 186 206 320 4.28e-16 77.4
Msa0257930 AT1G69810.2 47.297 74 38 1 80 152 145 218 5.15e-16 77.0
Msa0257930 AT4G26640.1 32.759 116 67 2 81 186 310 424 9.20e-16 77.0
Msa0257930 AT4G26640.2 32.759 116 67 2 81 186 382 496 1.15e-15 76.6
Msa0257930 AT5G07100.2 49.206 63 31 1 81 143 142 203 1.20e-15 73.9
Msa0257930 AT5G07100.2 30.435 138 88 2 62 192 6 142 1.14e-11 63.2
Msa0257930 AT5G07100.4 49.206 63 31 1 81 143 142 203 1.20e-15 73.9
Msa0257930 AT5G07100.4 30.435 138 88 2 62 192 6 142 1.14e-11 63.2
Msa0257930 AT5G07100.5 49.206 63 31 1 81 143 142 203 1.20e-15 73.9
Msa0257930 AT5G07100.5 30.435 138 88 2 62 192 6 142 1.14e-11 63.2
Msa0257930 AT5G07100.3 49.206 63 31 1 81 143 142 203 1.20e-15 73.9
Msa0257930 AT5G07100.3 30.435 138 88 2 62 192 6 142 1.14e-11 63.2
Msa0257930 AT2G03340.1 34.228 149 79 6 11 144 334 478 1.38e-15 76.3
Msa0257930 AT2G03340.1 43.056 72 39 2 78 149 248 317 3.48e-13 69.3
Msa0257930 AT4G26640.7 32.759 116 67 2 81 186 342 456 1.39e-15 76.3
Msa0257930 AT4G31800.2 42.857 77 44 0 81 157 112 188 2.20e-15 73.9
Msa0257930 AT2G40740.1 37.719 114 63 3 50 158 146 256 2.55e-15 74.3
Msa0257930 AT5G07100.1 49.206 63 31 1 81 143 235 296 2.77e-15 74.7
Msa0257930 AT5G07100.1 30.435 138 88 2 62 192 99 235 7.06e-11 62.0
Msa0257930 AT2G40740.3 37.719 114 63 3 50 158 155 265 2.90e-15 74.3
Msa0257930 AT4G31800.1 42.857 77 44 0 81 157 177 253 3.94e-15 73.9
Msa0257930 AT2G47260.1 35.354 99 54 2 43 141 146 234 4.20e-15 74.3
Msa0257930 AT4G11070.2 36.429 140 77 5 16 143 37 176 7.46e-15 73.2
Msa0257930 AT2G38470.1 49.206 63 31 1 81 143 363 424 8.41e-15 73.9
Msa0257930 AT4G11070.1 36.429 140 77 5 16 143 69 208 8.48e-15 73.2
Msa0257930 AT1G69310.4 37.113 97 51 2 41 137 117 203 1.14e-14 72.4
Msa0257930 AT1G69310.2 37.113 97 51 2 41 137 117 203 1.14e-14 72.4
Msa0257930 AT1G69310.1 37.113 97 51 2 41 137 117 203 1.14e-14 72.4
Msa0257930 AT2G25000.2 50.000 60 30 0 81 140 104 163 1.27e-14 71.6
Msa0257930 AT2G25000.4 50.000 60 30 0 81 140 104 163 1.27e-14 71.6
Msa0257930 AT2G21900.1 38.261 115 63 3 27 140 61 168 1.43e-14 70.9
Msa0257930 AT2G25000.3 50.000 60 30 0 81 140 126 185 1.98e-14 71.2
Msa0257930 AT2G25000.1 50.000 60 30 0 81 140 147 206 2.65e-14 71.2
Msa0257930 AT2G30250.1 43.373 83 37 2 58 140 315 387 3.32e-14 72.0
Msa0257930 AT3G01080.2 39.796 98 51 3 47 140 310 403 4.37e-14 72.0
Msa0257930 AT3G01080.2 49.206 63 30 2 78 140 203 263 2.57e-12 66.6
Msa0257930 AT3G01080.1 39.796 98 51 3 47 140 272 365 4.42e-14 71.6
Msa0257930 AT3G01080.1 49.206 63 30 2 78 140 165 225 2.58e-12 66.6
Msa0257930 AT5G56270.1 47.619 63 32 1 81 143 488 549 4.69e-14 72.0
Msa0257930 AT5G56270.1 46.970 66 33 2 78 143 271 334 1.25e-11 64.7
Msa0257930 AT1G80840.1 45.000 60 33 0 81 140 147 206 1.42e-13 69.7
Msa0257930 AT4G26440.1 32.479 117 69 2 46 162 347 453 4.20e-13 69.3
Msa0257930 AT4G26440.1 48.485 66 32 2 78 143 176 239 5.95e-12 65.9
Msa0257930 AT5G13080.1 41.892 74 40 2 71 144 58 128 6.56e-13 65.1
Msa0257930 AT4G23810.1 41.237 97 50 2 50 144 133 224 1.11e-12 67.4
Msa0257930 AT3G01970.1 38.272 81 47 2 71 149 56 135 1.23e-12 64.3
Msa0257930 AT3G01080.3 49.206 63 30 2 78 140 203 263 1.96e-12 66.6
Msa0257930 AT5G24110.1 30.201 149 81 4 24 168 63 192 3.18e-12 65.9
Msa0257930 AT2G46400.1 30.921 152 88 5 81 221 105 250 3.97e-12 65.5
Msa0257930 AT3G56400.1 31.081 148 66 6 25 146 57 194 5.51e-12 65.1
Msa0257930 AT1G64000.1 47.368 57 29 1 81 137 115 170 6.48e-12 63.5
Msa0257930 AT2G46130.1 47.368 57 29 1 81 137 31 86 2.14e-11 60.1
Msa0257930 AT5G41570.1 47.368 57 29 1 81 137 99 154 2.57e-11 61.2
Msa0257930 AT1G66560.1 44.444 72 38 1 66 135 89 160 2.83e-11 62.4
Msa0257930 AT5G64810.1 45.614 57 30 1 81 137 111 166 3.72e-11 61.2
Msa0257930 AT2G44745.1 47.368 57 29 1 81 137 146 201 4.67e-11 61.2
Msa0257930 AT5G43290.1 50.877 57 27 1 81 137 115 170 4.72e-11 62.0
Msa0257930 AT4G39410.1 44.118 68 37 1 71 138 214 280 5.42e-11 62.0
Msa0257930 AT1G55600.1 43.548 62 34 1 79 140 306 366 6.45e-11 62.4

Find 123 sgRNAs with CRISPR-Local

Find 346 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAAATGGTGATAAGAAAAT+TGG 0.180419 2_2:+53877143 None:intergenic
GTGGAAGAATGATGAGATTT+TGG 0.182722 2_2:+53871816 None:intergenic
CGTTTGTACATGATTGCTTA+TGG 0.243495 2_2:+53877071 None:intergenic
TTTCAGTATAGCGGCATTAC+AGG 0.325170 2_2:-53871480 Msa0257930:CDS
TCAGCATTATCAATTGAATT+AGG 0.330295 2_2:-53871432 Msa0257930:three_prime_UTR
AGGGGTGGCCGGAGTGGTGG+TGG 0.330811 2_2:+53877186 None:intergenic
GGCGATCACAACGCCGTGTT+TGG 0.338656 2_2:-53871669 Msa0257930:CDS
TAAGTTTATGTTACAGATCA+TGG 0.341030 2_2:-53871300 Msa0257930:three_prime_UTR
CTCGAGCTTGAGCTCAGGCT+CGG 0.342839 2_2:+53877004 None:intergenic
GCGAAAACGGGCCGATCTTC+CGG 0.342902 2_2:+53871717 None:intergenic
GGCCGGAGTGGTGGTGGTGG+TGG 0.353977 2_2:+53877192 None:intergenic
GGTGGTGGTGACGGCGGTGG+TGG 0.370731 2_2:+53871797 None:intergenic
TGCCGATCTCGGAGAGTTGC+CGG 0.372131 2_2:-53871544 Msa0257930:CDS
GGAGGGAGTGGTTGTGTTCA+TGG 0.377427 2_2:+53871844 None:intergenic
TGGATAAGGGGAGCCTTTGA+TGG 0.379797 2_2:+53876576 None:intergenic
CATATCCACCGTCGGATTCA+TGG 0.384899 2_2:-53876624 Msa0257930:CDS
CCACCCCTCTCTTCGTCTTC+CGG 0.396348 2_2:-53877171 Msa0257930:five_prime_UTR
AAATTATAGTACCTTGGATA+AGG 0.397051 2_2:+53876562 None:intergenic
AATTATAGTACCTTGGATAA+GGG 0.403232 2_2:+53876563 None:intergenic
GGTGGCCGGAGTGGTGGTGG+TGG 0.404335 2_2:+53877189 None:intergenic
GTCGGGATGAGTGGCGAAAA+CGG 0.412803 2_2:+53871704 None:intergenic
AGCAGGCCCCGCTTCTGAGA+TGG 0.433634 2_2:+53876980 None:intergenic
CACCGTCGGATTCATGGGCT+TGG 0.434014 2_2:-53876618 Msa0257930:CDS
TCCTCTACTCCGCCGCATAT+CGG 0.434523 2_2:+53871606 None:intergenic
TAGGTTACGAGGAGGTTTGT+GGG 0.435902 2_2:+53871870 None:intergenic
CATTGTGATTATAATATTCA+CGG 0.435971 2_2:-53871377 Msa0257930:three_prime_UTR
TCCTTCTCCCGGCGAGTCTC+CGG 0.439306 2_2:-53871754 Msa0257930:CDS
GATCCTTCCACGTCAGCAAT+TGG 0.441186 2_2:+53876664 None:intergenic
TCGAGCTTGAGCTCAGGCTC+GGG 0.444741 2_2:+53877005 None:intergenic
ATAAATAATTAATTATTAGC+AGG 0.447156 2_2:-53871240 Msa0257930:three_prime_UTR
CTCGAGCCCATCTCAGAAGC+GGG 0.454610 2_2:-53876987 Msa0257930:CDS
TCGGGATGAGTGGCGAAAAC+GGG 0.459881 2_2:+53871705 None:intergenic
GAGTCGTTGTTTGCCGATCT+CGG 0.460322 2_2:-53871555 Msa0257930:CDS
GAAATGGTGATAAGAAAATT+GGG 0.460441 2_2:+53877144 None:intergenic
TCACAAGAAGAGGGAGAAGC+AGG 0.462868 2_2:+53876963 None:intergenic
GCAGGCCCCGCTTCTGAGAT+GGG 0.464707 2_2:+53876981 None:intergenic
TCCGGCTGCCACTCCTCAGC+CGG 0.468481 2_2:-53871736 Msa0257930:CDS
GTAGGTTACGAGGAGGTTTG+TGG 0.474952 2_2:+53871869 None:intergenic
TGCTTAATTAGTGTAGGAAA+TGG 0.475634 2_2:+53877128 None:intergenic
AGCTGTGACGGTGGTGGTGA+CGG 0.477626 2_2:+53871788 None:intergenic
GGATAAGGGGAGCCTTTGAT+GGG 0.479551 2_2:+53876577 None:intergenic
GAGAGGGGTGGCCGGAGTGG+TGG 0.480749 2_2:+53877183 None:intergenic
GACGGTGGTGGTGACGGCGG+TGG 0.495344 2_2:+53871794 None:intergenic
TCCGGCTGAGGAGTGGCAGC+CGG 0.500132 2_2:+53871735 None:intergenic
GAGCCGCCATGGTGACAGAT+TGG 0.502763 2_2:+53877278 None:intergenic
ATATCCACCGTCGGATTCAT+GGG 0.503432 2_2:-53876623 Msa0257930:CDS
TACCGATGTAGTAGTTCAAA+AGG 0.506115 2_2:-53871933 Msa0257930:CDS
ATGGGCTCGAGCTTGAGCTC+AGG 0.506629 2_2:+53876999 None:intergenic
GCCGGAGACTCGCCGGGAGA+AGG 0.506970 2_2:+53871753 None:intergenic
AAGACGAAGAGAGGGGTGGC+CGG 0.507176 2_2:+53877175 None:intergenic
AAGAACCATCACCCAAGAAA+AGG 0.507877 2_2:-53876926 Msa0257930:intron
TCCGATATGCGGCGGAGTAG+AGG 0.508135 2_2:-53871607 Msa0257930:CDS
ACGGGCCGATCTTCCGGCTG+AGG 0.512946 2_2:+53871723 None:intergenic
GAGGGAGTGGTTGTGTTCAT+GGG 0.513550 2_2:+53871845 None:intergenic
ATCACAACGCCGTGTTTGGA+TGG 0.519613 2_2:-53871665 Msa0257930:CDS
TTTAGTGTCTTCACAAGAAG+AGG 0.522076 2_2:+53876953 None:intergenic
AGTGGCAGCCGGAGACTCGC+CGG 0.523423 2_2:+53871746 None:intergenic
GAAGAGAGGGGTGGCCGGAG+TGG 0.525696 2_2:+53877180 None:intergenic
TTCGATGATGTTGTATCCAC+CGG 0.526361 2_2:-53871642 Msa0257930:CDS
TTGAAGTGCTTAATTAGTGT+AGG 0.526988 2_2:+53877122 None:intergenic
CACTTGAAATATTTCTCTGT+CGG 0.529776 2_2:+53871505 None:intergenic
CCACTCCTCAGCCGGAAGAT+CGG 0.530292 2_2:-53871728 Msa0257930:CDS
GCTCAGGCTCGGGCTCATCT+CGG 0.538319 2_2:+53877015 None:intergenic
GTGGTGGTGGTGATGAGGAG+AGG 0.547281 2_2:+53877205 None:intergenic
AGATTGAGAGAGATTAAGAG+AGG 0.549413 2_2:+53877234 None:intergenic
AGTGTCGACGGCAGCTGTGA+CGG 0.553848 2_2:+53871776 None:intergenic
TCAAGTGTGTTTCAGTATAG+CGG 0.554973 2_2:-53871489 Msa0257930:CDS
ACTAATTAAGCACTTCAAAG+AGG 0.559790 2_2:-53877117 Msa0257930:five_prime_UTR
GTGGCAGCCGGAGACTCGCC+GGG 0.561605 2_2:+53871747 None:intergenic
TACGGTCAAAAGCCCATCAA+AGG 0.561969 2_2:-53876589 Msa0257930:CDS
GTGGTTGTGTTCATGGGCGT+AGG 0.562233 2_2:+53871851 None:intergenic
TCATGGGCTTGGAGAAAGTA+CGG 0.563892 2_2:-53876607 Msa0257930:CDS
ATACCAATTGCTGACGTGGA+AGG 0.566426 2_2:-53876667 Msa0257930:CDS
ATTATAGTACCTTGGATAAG+GGG 0.571387 2_2:+53876564 None:intergenic
ATAGGAGGGAGATGAAGAAG+AGG 0.573853 2_2:-53876699 Msa0257930:intron
GTCGACGGCAGCTGTGACGG+TGG 0.574241 2_2:+53871779 None:intergenic
CTCGCCGGAAGACGAAGAGA+GGG 0.574547 2_2:+53877167 None:intergenic
GCTCGCCGGAAGACGAAGAG+AGG 0.575625 2_2:+53877166 None:intergenic
AGAGTTGCCGGAGTGTTCAA+CGG 0.576289 2_2:-53871532 Msa0257930:CDS
CTCCGGCAACTCTCCGAGAT+CGG 0.577094 2_2:+53871542 None:intergenic
TCGCCGGTGAGGTCAAAGTC+GGG 0.577492 2_2:+53871687 None:intergenic
CCGATCTTCCGGCTGAGGAG+TGG 0.579167 2_2:+53871728 None:intergenic
GAGGGAGATGAAGAAGAGGG+TGG 0.583069 2_2:-53876695 Msa0257930:CDS
CGGAAAACCGTTGAACACTC+CGG 0.588243 2_2:+53871525 None:intergenic
ATCGCCGGTGAGGTCAAAGT+CGG 0.588374 2_2:+53871686 None:intergenic
AAACACGGCGTTGTGATCGC+CGG 0.589318 2_2:+53871671 None:intergenic
CTCCAAGCCCATGAATCCGA+CGG 0.591645 2_2:+53876616 None:intergenic
GAGGTCAAAGTCGGGATGAG+TGG 0.592534 2_2:+53871695 None:intergenic
TTAGTGTCTTCACAAGAAGA+GGG 0.596042 2_2:+53876954 None:intergenic
GATAAGAAAATTGGGCTCGC+CGG 0.597941 2_2:+53877152 None:intergenic
GCCGTCGACACTCCTTCTCC+CGG 0.599041 2_2:-53871765 Msa0257930:CDS
GACTATACCAATTGCTGACG+TGG 0.603395 2_2:-53876671 Msa0257930:CDS
GCTCGAGCCCATCTCAGAAG+CGG 0.603968 2_2:-53876988 Msa0257930:CDS
GGAGGTTTGTGGGGTCCACA+CGG 0.607061 2_2:+53871880 None:intergenic
GACGGCAGCTGTGACGGTGG+TGG 0.612066 2_2:+53871782 None:intergenic
GTGGAAGGATCTAAGAGTAG+AGG 0.612807 2_2:-53876652 Msa0257930:CDS
GTTCATGGGCGTAGGTTACG+AGG 0.614339 2_2:+53871859 None:intergenic
TTGTTTAATATGAGCCGCCA+TGG 0.617147 2_2:+53877267 None:intergenic
TCAAAGGCTCCCCTTATCCA+AGG 0.621296 2_2:-53876573 Msa0257930:intron
TCGAGCCCATCTCAGAAGCG+GGG 0.626614 2_2:-53876986 Msa0257930:CDS
GCCGGGAGAAGGAGTGTCGA+CGG 0.631416 2_2:+53871764 None:intergenic
TAGGAGGGAGATGAAGAAGA+GGG 0.638622 2_2:-53876698 Msa0257930:CDS
AGGTTACGAGGAGGTTTGTG+GGG 0.641192 2_2:+53871871 None:intergenic
CTCGTAAGTCCGATATGCGG+CGG 0.641711 2_2:-53871615 Msa0257930:CDS
TCGCCGGAAGACGAAGAGAG+GGG 0.641917 2_2:+53877168 None:intergenic
CCGGAAGACGAAGAGAGGGG+TGG 0.642562 2_2:+53877171 None:intergenic
CGGCGTTGTGATCGCCGGTG+AGG 0.644184 2_2:+53871676 None:intergenic
GACGTTGACGATGCGAGAGG+AGG 0.647457 2_2:-53871580 Msa0257930:CDS
CATGGGCGTAGGTTACGAGG+AGG 0.653568 2_2:+53871862 None:intergenic
ATCATCGAACCATCCAAACA+CGG 0.655214 2_2:+53871656 None:intergenic
AGGAGAGACATATCCACCGT+CGG 0.668578 2_2:-53876632 Msa0257930:CDS
TGTGACGGTGGTGGTGACGG+CGG 0.671147 2_2:+53871791 None:intergenic
CGGACTTACGAGAACTCCGG+TGG 0.673877 2_2:+53871626 None:intergenic
TATCGGACTTACGAGAACTC+CGG 0.686902 2_2:+53871623 None:intergenic
GTTCTCGTAAGTCCGATATG+CGG 0.693669 2_2:-53871618 Msa0257930:CDS
TGTGACGTTGACGATGCGAG+AGG 0.696998 2_2:-53871583 Msa0257930:CDS
TTCACGGCCTGAAAATCGTG+CGG 0.702805 2_2:-53871361 Msa0257930:three_prime_UTR
ACAAGTCGAAAGAAGCCGTG+TGG 0.703821 2_2:-53871895 Msa0257930:CDS
ACATTGCCAATCTGTCACCA+TGG 0.708968 2_2:-53877284 Msa0257930:five_prime_UTR
CATCCCGACTTTGACCTCAC+CGG 0.711873 2_2:-53871690 Msa0257930:CDS
CAAGCCCATGAATCCGACGG+TGG 0.711911 2_2:+53876619 None:intergenic
TCTCGGTCAGCAACATACAG+TGG 0.713476 2_2:+53877032 None:intergenic
TTGCCAATCTGTCACCATGG+CGG 0.732195 2_2:-53877281 Msa0257930:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAATCATTTTGTTTAAAT+TGG + chr2_2:53871725-53871744 None:intergenic 10.0%
!! ATTAAAAAATTAACGATTAT+AGG - chr2_2:53872949-53872968 Msa0257930:intron 10.0%
!! ATTACAAAATTAAAAATCAT+AGG - chr2_2:53873064-53873083 Msa0257930:intron 10.0%
!! ATAATTAAATGATATTTGAT+TGG - chr2_2:53874948-53874967 Msa0257930:intron 10.0%
!!! TATTTTGTTTTCTTTTTAAT+CGG - chr2_2:53875099-53875118 Msa0257930:intron 10.0%
!! AAAAAAAAAAAAAAGAACTA+CGG + chr2_2:53875231-53875250 None:intergenic 10.0%
!!! ATATGAACATTTTAATTTTA+TGG - chr2_2:53875279-53875298 Msa0257930:intron 10.0%
!! ATACATTTCATTATAAAATA+TGG + chr2_2:53875308-53875327 None:intergenic 10.0%
!!! TTATTTTTATTAGAAAAACA+TGG - chr2_2:53875703-53875722 Msa0257930:intron 10.0%
!! TCTTAATAAATTATTCTTTA+AGG + chr2_2:53876163-53876182 None:intergenic 10.0%
!! ATAAATAATTAATTATTAGC+AGG - chr2_2:53877273-53877292 Msa0257930:five_prime_UTR 10.0%
!!! TTTAAATTTCTCCATTTTTA+TGG - chr2_2:53871623-53871642 Msa0257930:CDS 15.0%
!! TAAACATCATCTTAATTAAT+TGG - chr2_2:53872002-53872021 Msa0257930:intron 15.0%
!!! AAGAATGATAAATATAGTTT+TGG - chr2_2:53872109-53872128 Msa0257930:intron 15.0%
!!! TTTTTCATCAAATAATTTAG+TGG + chr2_2:53872714-53872733 None:intergenic 15.0%
!! AATATAATTATAAACTCGAT+TGG + chr2_2:53872842-53872861 None:intergenic 15.0%
!!! CGTTAATTTTTTAATTTTTC+CGG + chr2_2:53872944-53872963 None:intergenic 15.0%
!!! GTTTTTAAACAATTTTTCAA+CGG - chr2_2:53873099-53873118 Msa0257930:intron 15.0%
!! TTTACTACTACTATAAATTA+CGG + chr2_2:53873293-53873312 None:intergenic 15.0%
!!! TTGTTACATTTAGATTTTTT+CGG + chr2_2:53873396-53873415 None:intergenic 15.0%
!!! TTAATTTTATCCTAAAACTT+CGG - chr2_2:53874316-53874335 Msa0257930:intron 15.0%
!!! GTATTTCTACTTTTTATTTT+TGG - chr2_2:53874465-53874484 Msa0257930:intron 15.0%
!!! ATTTTTTAACTAATGTTTGA+GGG + chr2_2:53874507-53874526 None:intergenic 15.0%
!!! TTTTTAAATTCTTGAATCAA+TGG + chr2_2:53874821-53874840 None:intergenic 15.0%
!! TCAAGAATTTAAAAATTCAA+TGG - chr2_2:53874826-53874845 Msa0257930:intron 15.0%
!! ATTGTTAATAAATGGTTTAA+AGG - chr2_2:53875370-53875389 Msa0257930:intron 15.0%
!!! TATGAGAATATTTTAAAGAA+TGG + chr2_2:53875918-53875937 None:intergenic 15.0%
!! AATTTATTAAGAAAATTGAG+AGG - chr2_2:53876171-53876190 Msa0257930:intron 15.0%
!!! AAATACTCACATTTTTTTTA+AGG - chr2_2:53876310-53876329 Msa0257930:intron 15.0%
!! AAACAAAAATATCAAGTATA+TGG - chr2_2:53876365-53876384 Msa0257930:intron 15.0%
!!! ATTTAAAATTGTACAATATG+AGG + chr2_2:53876511-53876530 None:intergenic 15.0%
!! GCAGAAATTATTATTGATAA+CGG + chr2_2:53871698-53871717 None:intergenic 20.0%
!!! TATTTTTTTGGTTTGTGAAT+TGG - chr2_2:53871750-53871769 Msa0257930:CDS 20.0%
!!! ATTTTTTTGGTTTGTGAATT+GGG - chr2_2:53871751-53871770 Msa0257930:CDS 20.0%
!! TGTATCATAAAATTCTTCAA+CGG + chr2_2:53871793-53871812 None:intergenic 20.0%
!!! AAGAATTTTATGATACACAT+AGG - chr2_2:53871796-53871815 Msa0257930:CDS 20.0%
!! CAAATGAAATTATAGATGTT+TGG - chr2_2:53872162-53872181 Msa0257930:intron 20.0%
!! ATTGTGATATATAAAGATTG+AGG - chr2_2:53872639-53872658 Msa0257930:intron 20.0%
!!! AATTTTTTAATTTTTCCGGA+TGG + chr2_2:53872940-53872959 None:intergenic 20.0%
!!! AATTTTGTAATTTTCTACGT+GGG + chr2_2:53873055-53873074 None:intergenic 20.0%
!!! TAATTTTGTAATTTTCTACG+TGG + chr2_2:53873056-53873075 None:intergenic 20.0%
!! TTTATAATACAACTGTTAAC+TGG + chr2_2:53873265-53873284 None:intergenic 20.0%
!! TATGAATTCTTTAATCTGTA+AGG - chr2_2:53873481-53873500 Msa0257930:intron 20.0%
!!! AAGTTATGACATCTTTATTT+TGG - chr2_2:53873736-53873755 Msa0257930:intron 20.0%
!!! TCAAAGTTTTGTTAATAACA+TGG - chr2_2:53873930-53873949 Msa0257930:intron 20.0%
!!! CAAAGTTTTGTTAATAACAT+GGG - chr2_2:53873931-53873950 Msa0257930:intron 20.0%
!!! AAAGTTTTGTTAATAACATG+GGG - chr2_2:53873932-53873951 Msa0257930:intron 20.0%
!!! GATTTTTTAACTAATGTTTG+AGG + chr2_2:53874508-53874527 None:intergenic 20.0%
!! TGTTTCAAACTTTGTAATAA+GGG + chr2_2:53874632-53874651 None:intergenic 20.0%
!! AATTTAAAAATTCAATGGCT+TGG - chr2_2:53874831-53874850 Msa0257930:intron 20.0%
!!! TTTTAAGAAAAGTTCATCAT+AGG - chr2_2:53875249-53875268 Msa0257930:intron 20.0%
!!! ATACTGTCATTTATTTTTCA+CGG - chr2_2:53875415-53875434 Msa0257930:intron 20.0%
!! TAATTTACAATTCACAAACT+TGG - chr2_2:53875508-53875527 Msa0257930:intron 20.0%
!!! GTAATTTGCAAAAAAAAATC+TGG - chr2_2:53875539-53875558 Msa0257930:intron 20.0%
!!! AATTTGTTGAAAAGAGAATA+AGG + chr2_2:53875681-53875700 None:intergenic 20.0%
!! GAATAAATGTTAACATTGAT+TGG - chr2_2:53875766-53875785 Msa0257930:intron 20.0%
!!! CTACTTTTTAAAATTAACAG+TGG - chr2_2:53875830-53875849 Msa0257930:intron 20.0%
!! ATCCAATCATATCTTAATTA+GGG - chr2_2:53875876-53875895 Msa0257930:intron 20.0%
!!! TTTTAAAGAATGGTATAACA+AGG + chr2_2:53875908-53875927 None:intergenic 20.0%
!!! ATATTTATTGAGATGTTTTC+AGG + chr2_2:53875952-53875971 None:intergenic 20.0%
!! CATTGTGATTATAATATTCA+CGG - chr2_2:53877136-53877155 Msa0257930:five_prime_UTR 20.0%
! GAAATGGTGATAAGAAAATT+GGG + chr2_2:53871372-53871391 None:intergenic 25.0%
!! AAAAACTCATACCTTTTCTT+GGG + chr2_2:53871601-53871620 None:intergenic 25.0%
!! AAAAAACTCATACCTTTTCT+TGG + chr2_2:53871602-53871621 None:intergenic 25.0%
! TTGAACGAAATCCATAAAAA+TGG + chr2_2:53871637-53871656 None:intergenic 25.0%
!! AATTTTATGATACACATAGG+AGG - chr2_2:53871799-53871818 Msa0257930:CDS 25.0%
!! ATTTTATGATACACATAGGA+GGG - chr2_2:53871800-53871819 Msa0257930:CDS 25.0%
! AATTATAGTACCTTGGATAA+GGG + chr2_2:53871953-53871972 None:intergenic 25.0%
! AAATTATAGTACCTTGGATA+AGG + chr2_2:53871954-53871973 None:intergenic 25.0%
! AGTTAGAAATTATAGTACCT+TGG + chr2_2:53871960-53871979 None:intergenic 25.0%
! AAATCATGCACATAAGTTTA+AGG - chr2_2:53872058-53872077 Msa0257930:intron 25.0%
! ATCTAGATGGGAAATTTAAT+TGG - chr2_2:53872082-53872101 Msa0257930:intron 25.0%
! GAAATTATAGATGTTTGGTT+TGG - chr2_2:53872167-53872186 Msa0257930:intron 25.0%
! AAAATGCGCATTATGATTTA+TGG - chr2_2:53872271-53872290 Msa0257930:intron 25.0%
!! GCATTATGATTTATGGATTA+TGG - chr2_2:53872278-53872297 Msa0257930:intron 25.0%
! CTTTACGAACATAATTTAGT+TGG - chr2_2:53872446-53872465 Msa0257930:intron 25.0%
! AACAATGCATCATTATATAC+AGG - chr2_2:53872509-53872528 Msa0257930:intron 25.0%
! ACAATGCATCATTATATACA+GGG - chr2_2:53872510-53872529 Msa0257930:intron 25.0%
! TGACTAGAATTCACTTTATA+AGG + chr2_2:53872570-53872589 None:intergenic 25.0%
! GATATATAAAGATTGAGGTT+TGG - chr2_2:53872644-53872663 Msa0257930:intron 25.0%
! AGAGCATATGTTAAAGAATT+CGG - chr2_2:53872888-53872907 Msa0257930:intron 25.0%
! ATATCTATATCTCCAGTAAT+TGG - chr2_2:53873021-53873040 Msa0257930:intron 25.0%
!! ATTTTGTAATTTTCTACGTG+GGG + chr2_2:53873054-53873073 None:intergenic 25.0%
!!! TAAACAATTTTTCAACGGTT+TGG - chr2_2:53873104-53873123 Msa0257930:intron 25.0%
!!! AAACAATTTTTCAACGGTTT+GGG - chr2_2:53873105-53873124 Msa0257930:intron 25.0%
!! ATTTTTGTCATGCTTATACT+TGG - chr2_2:53873158-53873177 Msa0257930:intron 25.0%
!! CTTTTTACCCAAACTTTTAA+TGG - chr2_2:53873345-53873364 Msa0257930:intron 25.0%
!!! TTACATTTAGATTTTTTCGG+TGG + chr2_2:53873393-53873412 None:intergenic 25.0%
! GGATAAACAAATTTATGTTG+TGG - chr2_2:53873543-53873562 Msa0257930:intron 25.0%
! CTTACATGTAGTAGTTATAT+TGG + chr2_2:53873650-53873669 None:intergenic 25.0%
! TGACTAACAGAAGAATTTAA+CGG - chr2_2:53873865-53873884 Msa0257930:intron 25.0%
!!! AAGTTTTGTTAATAACATGG+GGG - chr2_2:53873933-53873952 Msa0257930:intron 25.0%
! AACCTATCTTTAGTGTAAAT+AGG + chr2_2:53873995-53874014 None:intergenic 25.0%
!! TTTACACTAAAGATAGGTTT+TGG - chr2_2:53873996-53874015 Msa0257930:intron 25.0%
!! AGTCTTTAACATTTTTGTGT+GGG + chr2_2:53874159-53874178 None:intergenic 25.0%
!! TAGTCTTTAACATTTTTGTG+TGG + chr2_2:53874160-53874179 None:intergenic 25.0%
!! TTCTAAATTACCGAAGTTTT+AGG + chr2_2:53874329-53874348 None:intergenic 25.0%
!! TATTTTACTCATGTCATTAG+TGG - chr2_2:53874364-53874383 Msa0257930:intron 25.0%
! GTGTTTCAAACTTTGTAATA+AGG + chr2_2:53874633-53874652 None:intergenic 25.0%
!!! GATGTTTTAACATCAAAAAG+TGG + chr2_2:53874686-53874705 None:intergenic 25.0%
! ATGGTAAAACATTTGTGTAT+GGG + chr2_2:53874802-53874821 None:intergenic 25.0%
! AATGGTAAAACATTTGTGTA+TGG + chr2_2:53874803-53874822 None:intergenic 25.0%
!!! GTTGATTTTTTGACATTAGT+TGG + chr2_2:53875183-53875202 None:intergenic 25.0%
! CATGGAAAAATAATATGTGA+AGG - chr2_2:53875721-53875740 Msa0257930:intron 25.0%
!! TTTTGTTCGTACATATTTCT+TGG - chr2_2:53875791-53875810 Msa0257930:intron 25.0%
! CATCCAATCATATCTTAATT+AGG - chr2_2:53875875-53875894 Msa0257930:intron 25.0%
! AACCCTAATTAAGATATGAT+TGG + chr2_2:53875881-53875900 None:intergenic 25.0%
! ATGATAATCCAAAACAAGAA+GGG + chr2_2:53876438-53876457 None:intergenic 25.0%
!! AAATGTTAGTGATGTTGATT+GGG + chr2_2:53876461-53876480 None:intergenic 25.0%
! AAAATGTTAGTGATGTTGAT+TGG + chr2_2:53876462-53876481 None:intergenic 25.0%
!! AATTTGAATCTGATAATGCA+GGG - chr2_2:53876552-53876571 Msa0257930:intron 25.0%
!!! ATAATGCTGATATTTTTGCA+TGG + chr2_2:53877071-53877090 None:intergenic 25.0%
! TCAGCATTATCAATTGAATT+AGG - chr2_2:53877081-53877100 Msa0257930:exon 25.0%
! TAAGTTTATGTTACAGATCA+TGG - chr2_2:53877213-53877232 Msa0257930:five_prime_UTR 25.0%
GGAAATGGTGATAAGAAAAT+TGG + chr2_2:53871373-53871392 None:intergenic 30.0%
TGCTTAATTAGTGTAGGAAA+TGG + chr2_2:53871388-53871407 None:intergenic 30.0%
! TTGAAGTGCTTAATTAGTGT+AGG + chr2_2:53871394-53871413 None:intergenic 30.0%
ACTAATTAAGCACTTCAAAG+AGG - chr2_2:53871396-53871415 Msa0257930:three_prime_UTR 30.0%
ATTATAGTACCTTGGATAAG+GGG + chr2_2:53871952-53871971 None:intergenic 30.0%
GTTTATGAACTATAGTGTAG+AGG + chr2_2:53871987-53872006 None:intergenic 30.0%
! ATAAGTTTAAGGCATCTAGA+TGG - chr2_2:53872069-53872088 Msa0257930:intron 30.0%
! TAAGTTTAAGGCATCTAGAT+GGG - chr2_2:53872070-53872089 Msa0257930:intron 30.0%
AAAATTGTGTGAAGGATAGT+TGG - chr2_2:53872201-53872220 Msa0257930:intron 30.0%
CAATGCATCATTATATACAG+GGG - chr2_2:53872511-53872530 Msa0257930:intron 30.0%
CATCTCATAAGATGAATACA+CGG + chr2_2:53872682-53872701 None:intergenic 30.0%
AAAGTTTGGGTAAAAAGCTT+GGG + chr2_2:53873342-53873361 None:intergenic 30.0%
AAAAGTTTGGGTAAAAAGCT+TGG + chr2_2:53873343-53873362 None:intergenic 30.0%
AGCTCAAGCTAATAAAACAT+AGG + chr2_2:53873523-53873542 None:intergenic 30.0%
!! TATGTTTTATTAGCTTGAGC+TGG - chr2_2:53873522-53873541 Msa0257930:intron 30.0%
TAACGTTGTGTAATTTCAGA+AGG - chr2_2:53873903-53873922 Msa0257930:intron 30.0%
AACGTTGTGTAATTTCAGAA+GGG - chr2_2:53873904-53873923 Msa0257930:intron 30.0%
ACGAAACTTACAATTTCGAA+TGG - chr2_2:53873962-53873981 Msa0257930:intron 30.0%
TGCCTATTTACACTAAAGAT+AGG - chr2_2:53873990-53874009 Msa0257930:intron 30.0%
! GTCTTTAACATTTTTGTGTG+GGG + chr2_2:53874158-53874177 None:intergenic 30.0%
CACATGAACAAATAAAGACA+CGG - chr2_2:53874650-53874669 Msa0257930:intron 30.0%
! TCACTGTTTCTTTCTAACTA+CGG - chr2_2:53874710-53874729 Msa0257930:intron 30.0%
!! TTTTCTCTTGGTGACTTTTA+AGG - chr2_2:53874752-53874771 Msa0257930:intron 30.0%
! AAATTCAATGGCTTGGATTT+AGG - chr2_2:53874838-53874857 Msa0257930:intron 30.0%
TTGTTGAAAAGAGAATAAGG+TGG + chr2_2:53875678-53875697 None:intergenic 30.0%
!! TTAAAGAGTGCTTACAGTTA+AGG + chr2_2:53876002-53876021 None:intergenic 30.0%
! TGTGAGTATTTTTCTTGTGA+GGG + chr2_2:53876301-53876320 None:intergenic 30.0%
! ATGTGAGTATTTTTCTTGTG+AGG + chr2_2:53876302-53876321 None:intergenic 30.0%
GATGATAATCCAAAACAAGA+AGG + chr2_2:53876439-53876458 None:intergenic 30.0%
! GAATTTGAATCTGATAATGC+AGG - chr2_2:53876551-53876570 Msa0257930:intron 30.0%
! ATTTGAATCTGATAATGCAG+GGG - chr2_2:53876553-53876572 Msa0257930:intron 30.0%
! AACCTTTTGAACTACTACAT+CGG + chr2_2:53876585-53876604 None:intergenic 30.0%
! TGGAAGAATGATGAGATTTT+GGG + chr2_2:53876699-53876718 None:intergenic 30.0%
CACTTGAAATATTTCTCTGT+CGG + chr2_2:53877011-53877030 None:intergenic 30.0%
AAATCGTGCGGTATTAAAAA+AGG - chr2_2:53877164-53877183 Msa0257930:five_prime_UTR 30.0%
AGATTGAGAGAGATTAAGAG+AGG + chr2_2:53871282-53871301 None:intergenic 35.0%
CGTTTGTACATGATTGCTTA+TGG + chr2_2:53871445-53871464 None:intergenic 35.0%
TTAGTGTCTTCACAAGAAGA+GGG + chr2_2:53871562-53871581 None:intergenic 35.0%
TTTAGTGTCTTCACAAGAAG+AGG + chr2_2:53871563-53871582 None:intergenic 35.0%
TAACTGACGCAGTTGTAAAA+TGG - chr2_2:53871660-53871679 Msa0257930:CDS 35.0%
!! ATGTTTGGTTTGGAAATGCA+TGG - chr2_2:53872177-53872196 Msa0257930:intron 35.0%
TATAGTCATGTGAGATCAGT+TGG - chr2_2:53872483-53872502 Msa0257930:intron 35.0%
CATCATTATATACAGGGGTT+GGG - chr2_2:53872516-53872535 Msa0257930:intron 35.0%
AGGTGAATAATTGAGATGTC+CGG + chr2_2:53872550-53872569 None:intergenic 35.0%
GCATATGTTAAAGAATTCGG+TGG - chr2_2:53872891-53872910 Msa0257930:intron 35.0%
! TATGTTAAAGAATTCGGTGG+CGG - chr2_2:53872894-53872913 Msa0257930:intron 35.0%
TTGTCATGCTTATACTTGGT+TGG - chr2_2:53873162-53873181 Msa0257930:intron 35.0%
TGTCATGCTTATACTTGGTT+GGG - chr2_2:53873163-53873182 Msa0257930:intron 35.0%
!!! CATTTAGATTTTTTCGGTGG+CGG + chr2_2:53873390-53873409 None:intergenic 35.0%
! TGTGGATTATGCATATGATG+TGG - chr2_2:53873561-53873580 Msa0257930:intron 35.0%
AACATACATGCACATCTCAT+AGG + chr2_2:53873599-53873618 None:intergenic 35.0%
! ACGTTAGCAAAAGTACATCT+AGG + chr2_2:53873700-53873719 None:intergenic 35.0%
ACAGAAGAATTTAACGGAAG+AGG - chr2_2:53873871-53873890 Msa0257930:intron 35.0%
! CACTGTTTCTTTCTAACTAC+GGG - chr2_2:53874711-53874730 Msa0257930:intron 35.0%
! ATGTGCTTAGGATTTTCTCT+TGG - chr2_2:53874740-53874759 Msa0257930:intron 35.0%
! ATAAAAGTGCACTTGTGCAT+GGG - chr2_2:53875619-53875638 Msa0257930:intron 35.0%
!! AGAGAATAAGGTGGCTTTAA+GGG + chr2_2:53875669-53875688 None:intergenic 35.0%
! AAGAGAATAAGGTGGCTTTA+AGG + chr2_2:53875670-53875689 None:intergenic 35.0%
GGTCATCCAATCATATCTTA+TGG - chr2_2:53875851-53875870 Msa0257930:intron 35.0%
GGATGACCATAAGATATGAT+TGG + chr2_2:53875860-53875879 None:intergenic 35.0%
GAGAGGTTTAGTGATTGAAA+TGG - chr2_2:53876188-53876207 Msa0257930:intron 35.0%
TACCGATGTAGTAGTTCAAA+AGG - chr2_2:53876580-53876599 Msa0257930:CDS 35.0%
!! TCTTTCGACTTGTTTTCTTG+CGG + chr2_2:53876611-53876630 None:intergenic 35.0%
!! AATGATGAGATTTTGGGAGA+GGG + chr2_2:53876693-53876712 None:intergenic 35.0%
! GTGGAAGAATGATGAGATTT+TGG + chr2_2:53876700-53876719 None:intergenic 35.0%
TCAAGTGTGTTTCAGTATAG+CGG - chr2_2:53877024-53877043 Msa0257930:CDS 35.0%
! TTTAATACCGCACGATTTTC+AGG + chr2_2:53877162-53877181 None:intergenic 35.0%
TTGTTTAATATGAGCCGCCA+TGG + chr2_2:53871249-53871268 None:intergenic 40.0%
AAGAACCATCACCCAAGAAA+AGG - chr2_2:53871587-53871606 Msa0257930:CDS 40.0%
! TCATACCTTTTCTTGGGTGA+TGG + chr2_2:53871595-53871614 None:intergenic 40.0%
TGCATGGCAAAATTGTGTGA+AGG - chr2_2:53872193-53872212 Msa0257930:intron 40.0%
! GATTATGGATTGTGCCATTG+TGG - chr2_2:53872293-53872312 Msa0257930:intron 40.0%
GTGGTGGTAGTTAGAAACTT+TGG - chr2_2:53872317-53872336 Msa0257930:intron 40.0%
ATAAATGCGTGAAACCAACG+TGG + chr2_2:53872374-53872393 None:intergenic 40.0%
GCATCATTATATACAGGGGT+TGG - chr2_2:53872515-53872534 Msa0257930:intron 40.0%
GTGAATAATTGAGATGTCCG+GGG + chr2_2:53872548-53872567 None:intergenic 40.0%
GGTGAATAATTGAGATGTCC+GGG + chr2_2:53872549-53872568 None:intergenic 40.0%
!! TTTTCAACGGTTTGGGTTTC+CGG - chr2_2:53873112-53873131 Msa0257930:intron 40.0%
!!! TATGTCACTTTTAGAACCGC+CGG + chr2_2:53873134-53873153 None:intergenic 40.0%
! GCGGAAAAATTAGTTTGGGT+GGG + chr2_2:53873371-53873390 None:intergenic 40.0%
!! GGTGGCGGAAAAATTAGTTT+GGG + chr2_2:53873375-53873394 None:intergenic 40.0%
CATCTCATAGGCTCTTATTC+TGG + chr2_2:53873587-53873606 None:intergenic 40.0%
GATATGACACATTAGACACG+TGG - chr2_2:53873807-53873826 Msa0257930:intron 40.0%
GTGATATTTGACTGTCTACG+TGG + chr2_2:53873838-53873857 None:intergenic 40.0%
AGACGCAAGCAAATTGTGAA+AGG + chr2_2:53874022-53874041 None:intergenic 40.0%
CTAGTGACTAGTGAACATCA+AGG - chr2_2:53874872-53874891 Msa0257930:intron 40.0%
CGAGTTGTGATTGCAAAATC+TGG - chr2_2:53875566-53875585 Msa0257930:intron 40.0%
! GATAAAAGTGCACTTGTGCA+TGG - chr2_2:53875618-53875637 Msa0257930:intron 40.0%
! ATGTGAAGGAGTATGAGCAT+TGG - chr2_2:53875735-53875754 Msa0257930:intron 40.0%
AAGGGAAAGTGACACATCTA+TGG + chr2_2:53876420-53876439 None:intergenic 40.0%
!! GTCACTTTCCCTTCTTGTTT+TGG - chr2_2:53876427-53876446 Msa0257930:intron 40.0%
!! CTTTCGACTTGTTTTCTTGC+GGG + chr2_2:53876610-53876629 None:intergenic 40.0%
!! GAATGATGAGATTTTGGGAG+AGG + chr2_2:53876694-53876713 None:intergenic 40.0%
ATCATCGAACCATCCAAACA+CGG + chr2_2:53876860-53876879 None:intergenic 40.0%
TTCGATGATGTTGTATCCAC+CGG - chr2_2:53876871-53876890 Msa0257930:intron 40.0%
TTTCAGTATAGCGGCATTAC+AGG - chr2_2:53877033-53877052 Msa0257930:CDS 40.0%
ACATTGCCAATCTGTCACCA+TGG - chr2_2:53871229-53871248 Msa0257930:three_prime_UTR 45.0%
GATAAGAAAATTGGGCTCGC+CGG + chr2_2:53871364-53871383 None:intergenic 45.0%
ATAGGAGGGAGATGAAGAAG+AGG - chr2_2:53871814-53871833 Msa0257930:CDS 45.0%
TAGGAGGGAGATGAAGAAGA+GGG - chr2_2:53871815-53871834 Msa0257930:CDS 45.0%
GACTATACCAATTGCTGACG+TGG - chr2_2:53871842-53871861 Msa0257930:CDS 45.0%
ATACCAATTGCTGACGTGGA+AGG - chr2_2:53871846-53871865 Msa0257930:CDS 45.0%
GTGGAAGGATCTAAGAGTAG+AGG - chr2_2:53871861-53871880 Msa0257930:CDS 45.0%
ATATCCACCGTCGGATTCAT+GGG - chr2_2:53871890-53871909 Msa0257930:CDS 45.0%
TCATGGGCTTGGAGAAAGTA+CGG - chr2_2:53871906-53871925 Msa0257930:CDS 45.0%
TACGGTCAAAAGCCCATCAA+AGG - chr2_2:53871924-53871943 Msa0257930:CDS 45.0%
TAACTACCACCACACCACAA+TGG + chr2_2:53872310-53872329 None:intergenic 45.0%
TTCATGAGTCATGGTCCATC+CGG - chr2_2:53872922-53872941 Msa0257930:intron 45.0%
TATACTTGGTTGGGTAGCAG+AGG - chr2_2:53873172-53873191 Msa0257930:intron 45.0%
GGGTGGGCCATTAAAAGTTT+GGG + chr2_2:53873355-53873374 None:intergenic 45.0%
TGGGTGGGCCATTAAAAGTT+TGG + chr2_2:53873356-53873375 None:intergenic 45.0%
! GGCGGAAAAATTAGTTTGGG+TGG + chr2_2:53873372-53873391 None:intergenic 45.0%
!! CGGTGGCGGAAAAATTAGTT+TGG + chr2_2:53873376-53873395 None:intergenic 45.0%
ACAAATAAAGACACGGCCTG+TGG - chr2_2:53874657-53874676 Msa0257930:intron 45.0%
TACGGGCACAAAATGTGCTT+AGG - chr2_2:53874728-53874747 Msa0257930:intron 45.0%
TGTTCACTAGTCACTAGCTG+TGG + chr2_2:53874869-53874888 None:intergenic 45.0%
TGATGTACGCGCTTAAGATG+TGG - chr2_2:53876388-53876407 Msa0257930:intron 45.0%
TAGGTTACGAGGAGGTTTGT+GGG + chr2_2:53876646-53876665 None:intergenic 45.0%
!! ATGAGATTTTGGGAGAGGGA+GGG + chr2_2:53876689-53876708 None:intergenic 45.0%
TATCGGACTTACGAGAACTC+CGG + chr2_2:53876893-53876912 None:intergenic 45.0%
GTTCTCGTAAGTCCGATATG+CGG - chr2_2:53876895-53876914 Msa0257930:intron 45.0%
!!! GATTTTTTATTTTATTTTTT+TGG - chr2_2:53871738-53871757 Msa0257930:CDS 5.0%
!!! TTATATACTTTATAATTTTT+TGG - chr2_2:53873196-53873215 Msa0257930:intron 5.0%
!!! TATATACTTTATAATTTTTT+GGG - chr2_2:53873197-53873216 Msa0257930:intron 5.0%
!!! CAAAATAATTTTTTTTTTTA+AGG + chr2_2:53875086-53875105 None:intergenic 5.0%
!! ATAAAAAAATTGTTAATAAA+TGG - chr2_2:53875362-53875381 Msa0257930:intron 5.0%
TTGCCAATCTGTCACCATGG+CGG - chr2_2:53871232-53871251 Msa0257930:three_prime_UTR 50.0%
TCTCGGTCAGCAACATACAG+TGG + chr2_2:53871484-53871503 None:intergenic 50.0%
TCACAAGAAGAGGGAGAAGC+AGG + chr2_2:53871553-53871572 None:intergenic 50.0%
GATCCTTCCACGTCAGCAAT+TGG + chr2_2:53871852-53871871 None:intergenic 50.0%
AGGAGAGACATATCCACCGT+CGG - chr2_2:53871881-53871900 Msa0257930:CDS 50.0%
CATATCCACCGTCGGATTCA+TGG - chr2_2:53871889-53871908 Msa0257930:CDS 50.0%
GGATAAGGGGAGCCTTTGAT+GGG + chr2_2:53871939-53871958 None:intergenic 50.0%
TGGATAAGGGGAGCCTTTGA+TGG + chr2_2:53871940-53871959 None:intergenic 50.0%
TCAAAGGCTCCCCTTATCCA+AGG - chr2_2:53871940-53871959 Msa0257930:CDS 50.0%
TACTTCCCTACGCTTGAAGG+AGG + chr2_2:53872232-53872251 None:intergenic 50.0%
TCCTTCAAGCGTAGGGAAGT+AGG - chr2_2:53872231-53872250 Msa0257930:intron 50.0%
ACCTACTTCCCTACGCTTGA+AGG + chr2_2:53872235-53872254 None:intergenic 50.0%
AAGCGTAGGGAAGTAGGTTG+AGG - chr2_2:53872237-53872256 Msa0257930:intron 50.0%
! AGCGTAGGGAAGTAGGTTGA+GGG - chr2_2:53872238-53872257 Msa0257930:intron 50.0%
! TGGATTGTGCCATTGTGGTG+TGG - chr2_2:53872298-53872317 Msa0257930:intron 50.0%
! ATTGTGCCATTGTGGTGTGG+TGG - chr2_2:53872301-53872320 Msa0257930:intron 50.0%
GGATGGACCATGACTCATGA+AGG + chr2_2:53872923-53872942 None:intergenic 50.0%
! TGGGGCACTACACCAATTAC+TGG + chr2_2:53873036-53873055 None:intergenic 50.0%
CATCAAAAAGTGGACGCCAC+AGG + chr2_2:53874676-53874695 None:intergenic 50.0%
ACAAGTCGAAAGAAGCCGTG+TGG - chr2_2:53876618-53876637 Msa0257930:CDS 50.0%
AGGTTACGAGGAGGTTTGTG+GGG + chr2_2:53876645-53876664 None:intergenic 50.0%
GTAGGTTACGAGGAGGTTTG+TGG + chr2_2:53876647-53876666 None:intergenic 50.0%
GAGGGAGTGGTTGTGTTCAT+GGG + chr2_2:53876671-53876690 None:intergenic 50.0%
!! GATGAGATTTTGGGAGAGGG+AGG + chr2_2:53876690-53876709 None:intergenic 50.0%
ATCACAACGCCGTGTTTGGA+TGG - chr2_2:53876848-53876867 Msa0257930:intron 50.0%
GAGTCGTTGTTTGCCGATCT+CGG - chr2_2:53876958-53876977 Msa0257930:CDS 50.0%
! AGAGTTGCCGGAGTGTTCAA+CGG - chr2_2:53876981-53877000 Msa0257930:CDS 50.0%
CGGAAAACCGTTGAACACTC+CGG + chr2_2:53876991-53877010 None:intergenic 50.0%
TTCACGGCCTGAAAATCGTG+CGG - chr2_2:53877152-53877171 Msa0257930:five_prime_UTR 50.0%
GAGGGAGATGAAGAAGAGGG+TGG - chr2_2:53871818-53871837 Msa0257930:CDS 55.0%
CTCCAAGCCCATGAATCCGA+CGG + chr2_2:53871900-53871919 None:intergenic 55.0%
CGTCACCTCCTTCAAGCGTA+GGG - chr2_2:53872224-53872243 Msa0257930:intron 55.0%
! GTAGGGAAGTAGGTTGAGGG+TGG - chr2_2:53872241-53872260 Msa0257930:intron 55.0%
!! ACGCGAGCTCTAAACCACGT+TGG - chr2_2:53872357-53872376 Msa0257930:intron 55.0%
GCGGAGTCCTTCATGAGTCA+TGG - chr2_2:53872913-53872932 Msa0257930:intron 55.0%
! TCAACGGTTTGGGTTTCCGG+CGG - chr2_2:53873115-53873134 Msa0257930:intron 55.0%
GTTCATGGGCGTAGGTTACG+AGG + chr2_2:53876657-53876676 None:intergenic 55.0%
GTGGTTGTGTTCATGGGCGT+AGG + chr2_2:53876665-53876684 None:intergenic 55.0%
GGAGGGAGTGGTTGTGTTCA+TGG + chr2_2:53876672-53876691 None:intergenic 55.0%
!! ATTTTGGGAGAGGGAGGGAG+TGG + chr2_2:53876684-53876703 None:intergenic 55.0%
TCGGGATGAGTGGCGAAAAC+GGG + chr2_2:53876811-53876830 None:intergenic 55.0%
GTCGGGATGAGTGGCGAAAA+CGG + chr2_2:53876812-53876831 None:intergenic 55.0%
GAGGTCAAAGTCGGGATGAG+TGG + chr2_2:53876821-53876840 None:intergenic 55.0%
CATCCCGACTTTGACCTCAC+CGG - chr2_2:53876823-53876842 Msa0257930:intron 55.0%
ATCGCCGGTGAGGTCAAAGT+CGG + chr2_2:53876830-53876849 None:intergenic 55.0%
AAACACGGCGTTGTGATCGC+CGG + chr2_2:53876845-53876864 None:intergenic 55.0%
CTCGTAAGTCCGATATGCGG+CGG - chr2_2:53876898-53876917 Msa0257930:intron 55.0%
TCCTCTACTCCGCCGCATAT+CGG + chr2_2:53876910-53876929 None:intergenic 55.0%
TGTGACGTTGACGATGCGAG+AGG - chr2_2:53876930-53876949 Msa0257930:CDS 55.0%
GAGCCGCCATGGTGACAGAT+TGG + chr2_2:53871238-53871257 None:intergenic 60.0%
!! GTGGTGGTGGTGATGAGGAG+AGG + chr2_2:53871311-53871330 None:intergenic 60.0%
!! TGGTGGTGGTGGTGGTGATG+AGG + chr2_2:53871316-53871335 None:intergenic 60.0%
AAGACGAAGAGAGGGGTGGC+CGG + chr2_2:53871341-53871360 None:intergenic 60.0%
CCACCCCTCTCTTCGTCTTC+CGG - chr2_2:53871342-53871361 Msa0257930:three_prime_UTR 60.0%
TCGCCGGAAGACGAAGAGAG+GGG + chr2_2:53871348-53871367 None:intergenic 60.0%
CTCGCCGGAAGACGAAGAGA+GGG + chr2_2:53871349-53871368 None:intergenic 60.0%
TCGAGCTTGAGCTCAGGCTC+GGG + chr2_2:53871511-53871530 None:intergenic 60.0%
CTCGAGCTTGAGCTCAGGCT+CGG + chr2_2:53871512-53871531 None:intergenic 60.0%
ATGGGCTCGAGCTTGAGCTC+AGG + chr2_2:53871517-53871536 None:intergenic 60.0%
GCTCGAGCCCATCTCAGAAG+CGG - chr2_2:53871525-53871544 Msa0257930:CDS 60.0%
CTCGAGCCCATCTCAGAAGC+GGG - chr2_2:53871526-53871545 Msa0257930:CDS 60.0%
TCGAGCCCATCTCAGAAGCG+GGG - chr2_2:53871527-53871546 Msa0257930:CDS 60.0%
CAAGCCCATGAATCCGACGG+TGG + chr2_2:53871897-53871916 None:intergenic 60.0%
CACCGTCGGATTCATGGGCT+TGG - chr2_2:53871895-53871914 Msa0257930:CDS 60.0%
GCGTCACCTCCTTCAAGCGT+AGG - chr2_2:53872223-53872242 Msa0257930:intron 60.0%
GGAGGTTTGTGGGGTCCACA+CGG + chr2_2:53876636-53876655 None:intergenic 60.0%
CATGGGCGTAGGTTACGAGG+AGG + chr2_2:53876654-53876673 None:intergenic 60.0%
! AGCTGTGACGGTGGTGGTGA+CGG + chr2_2:53876728-53876747 None:intergenic 60.0%
!! AGTGTCGACGGCAGCTGTGA+CGG + chr2_2:53876740-53876759 None:intergenic 60.0%
CCACTCCTCAGCCGGAAGAT+CGG - chr2_2:53876785-53876804 Msa0257930:intron 60.0%
GCGAAAACGGGCCGATCTTC+CGG + chr2_2:53876799-53876818 None:intergenic 60.0%
TCGCCGGTGAGGTCAAAGTC+GGG + chr2_2:53876829-53876848 None:intergenic 60.0%
GGCGATCACAACGCCGTGTT+TGG - chr2_2:53876844-53876863 Msa0257930:intron 60.0%
CGGACTTACGAGAACTCCGG+TGG + chr2_2:53876890-53876909 None:intergenic 60.0%
TCCGATATGCGGCGGAGTAG+AGG - chr2_2:53876906-53876925 Msa0257930:intron 60.0%
GACGTTGACGATGCGAGAGG+AGG - chr2_2:53876933-53876952 Msa0257930:CDS 60.0%
TGCCGATCTCGGAGAGTTGC+CGG - chr2_2:53876969-53876988 Msa0257930:CDS 60.0%
CTCCGGCAACTCTCCGAGAT+CGG + chr2_2:53876974-53876993 None:intergenic 60.0%
CACCACCACCACCACCACTC+CGG - chr2_2:53871319-53871338 Msa0257930:three_prime_UTR 65.0%
CCGGAAGACGAAGAGAGGGG+TGG + chr2_2:53871345-53871364 None:intergenic 65.0%
GCTCGCCGGAAGACGAAGAG+AGG + chr2_2:53871350-53871369 None:intergenic 65.0%
GCTCAGGCTCGGGCTCATCT+CGG + chr2_2:53871501-53871520 None:intergenic 65.0%
!! GCAGGCCCCGCTTCTGAGAT+GGG + chr2_2:53871535-53871554 None:intergenic 65.0%
! AGCAGGCCCCGCTTCTGAGA+TGG + chr2_2:53871536-53871555 None:intergenic 65.0%
CAGGGGTTGGGTTCGAACCC+CGG - chr2_2:53872528-53872547 Msa0257930:intron 65.0%
!! TGTGACGGTGGTGGTGACGG+CGG + chr2_2:53876725-53876744 None:intergenic 65.0%
GCCGTCGACACTCCTTCTCC+CGG - chr2_2:53876748-53876767 Msa0257930:intron 65.0%
!! GCCGGGAGAAGGAGTGTCGA+CGG + chr2_2:53876752-53876771 None:intergenic 65.0%
TCCTTCTCCCGGCGAGTCTC+CGG - chr2_2:53876759-53876778 Msa0257930:intron 65.0%
CCGATCTTCCGGCTGAGGAG+TGG + chr2_2:53876788-53876807 None:intergenic 65.0%
GAAGAGAGGGGTGGCCGGAG+TGG + chr2_2:53871336-53871355 None:intergenic 70.0%
GACGGCAGCTGTGACGGTGG+TGG + chr2_2:53876734-53876753 None:intergenic 70.0%
GTCGACGGCAGCTGTGACGG+TGG + chr2_2:53876737-53876756 None:intergenic 70.0%
AGTGGCAGCCGGAGACTCGC+CGG + chr2_2:53876770-53876789 None:intergenic 70.0%
TCCGGCTGCCACTCCTCAGC+CGG - chr2_2:53876777-53876796 Msa0257930:intron 70.0%
TCCGGCTGAGGAGTGGCAGC+CGG + chr2_2:53876781-53876800 None:intergenic 70.0%
ACGGGCCGATCTTCCGGCTG+AGG + chr2_2:53876793-53876812 None:intergenic 70.0%
CGGCGTTGTGATCGCCGGTG+AGG + chr2_2:53876840-53876859 None:intergenic 70.0%
!! GGCCGGAGTGGTGGTGGTGG+TGG + chr2_2:53871324-53871343 None:intergenic 75.0%
!! GGTGGCCGGAGTGGTGGTGG+TGG + chr2_2:53871327-53871346 None:intergenic 75.0%
AGGGGTGGCCGGAGTGGTGG+TGG + chr2_2:53871330-53871349 None:intergenic 75.0%
GAGAGGGGTGGCCGGAGTGG+TGG + chr2_2:53871333-53871352 None:intergenic 75.0%
!! GGTGGTGGTGACGGCGGTGG+TGG + chr2_2:53876719-53876738 None:intergenic 75.0%
!! GACGGTGGTGGTGACGGCGG+TGG + chr2_2:53876722-53876741 None:intergenic 75.0%
GCCGGAGACTCGCCGGGAGA+AGG + chr2_2:53876763-53876782 None:intergenic 75.0%
GTGGCAGCCGGAGACTCGCC+GGG + chr2_2:53876769-53876788 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 53871220 53877315 53871220 ID=Msa0257930;Name=Msa0257930
chr2_2 mRNA 53871220 53877315 53871220 ID=Msa0257930-mRNA-1;Parent=Msa0257930;Name=Msa0257930-mRNA-1;_AED=0.01;_eAED=0.01;_QI=234|1|1|1|1|1|3|256|261
chr2_2 exon 53871220 53871962 53871220 ID=Msa0257930-mRNA-1:exon:16189;Parent=Msa0257930-mRNA-1
chr2_2 exon 53876574 53876717 53876574 ID=Msa0257930-mRNA-1:exon:16188;Parent=Msa0257930-mRNA-1
chr2_2 exon 53876927 53877315 53876927 ID=Msa0257930-mRNA-1:exon:16187;Parent=Msa0257930-mRNA-1
chr2_2 five_prime_UTR 53877082 53877315 53877082 ID=Msa0257930-mRNA-1:five_prime_utr;Parent=Msa0257930-mRNA-1
chr2_2 CDS 53876927 53877081 53876927 ID=Msa0257930-mRNA-1:cds;Parent=Msa0257930-mRNA-1
chr2_2 CDS 53876574 53876717 53876574 ID=Msa0257930-mRNA-1:cds;Parent=Msa0257930-mRNA-1
chr2_2 CDS 53871476 53871962 53871476 ID=Msa0257930-mRNA-1:cds;Parent=Msa0257930-mRNA-1
chr2_2 three_prime_UTR 53871220 53871475 53871220 ID=Msa0257930-mRNA-1:three_prime_utr;Parent=Msa0257930-mRNA-1
Gene Sequence

>Msa0257930

ATGTACAAACGTAGATTCAACACTAAACCACTGTATGTTGCTGACCGAGATGAGCCCGAGCCTGAGCTCAAGCTCGAGCCCATCTCAGAAGCGGGGCCTGCTTCTCCCTCTTCTTGTGAAGACACTAAAATTGAAGAACCATCACCCAAGAAAAGGAGGGAGATGAAGAAGAGGGTGGTGACTATACCAATTGCTGACGTGGAAGGATCTAAGAGTAGAGGAGAGACATATCCACCGTCGGATTCATGGGCTTGGAGAAAGTACGGTCAAAAGCCCATCAAAGGCTCCCCTTATCCAAGGGGATACTACCGATGTAGTAGTTCAAAAGGTTGTCCCGCAAGAAAACAAGTCGAAAGAAGCCGTGTGGACCCCACAAACCTCCTCGTAACCTACGCCCATGAACACAACCACTCCCTCCCTCTCCCAAAATCTCATCATTCTTCCACCACCGCCGTCACCACCACCGTCACAGCTGCCGTCGACACTCCTTCTCCCGGCGAGTCTCCGGCTGCCACTCCTCAGCCGGAAGATCGGCCCGTTTTCGCCACTCATCCCGACTTTGACCTCACCGGCGATCACAACGCCGTGTTTGGATGGTTCGATGATGTTGTATCCACCGGAGTTCTCGTAAGTCCGATATGCGGCGGAGTAGAGGATGTGACGTTGACGATGCGAGAGGAGGATGAGTCGTTGTTTGCCGATCTCGGAGAGTTGCCGGAGTGTTCAACGGTTTTCCGACAGAGAAATATTTCAAGTGTGTTTCAGTATAGCGGCATTACAGGATAA
Protein sequence

>Msa0257930

MYKRRFNTKPLYVADRDEPEPELKLEPISEAGPASPSSCEDTKIEEPSPKKRREMKKRVVTIPIADVEGSKSRGETYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTNLLVTYAHEHNHSLPLPKSHHSSTTAVTTTVTAAVDTPSPGESPAATPQPEDRPVFATHPDFDLTGDHNAVFGWFDDVVSTGVLVSPICGGVEDVTLTMREEDESLFADLGELPECSTVFRQRNISSVFQYSGITG*