Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0473940 | KEH35605.1 | 97.032 | 438 | 13 | 0 | 1 | 438 | 18 | 455 | 0.0 | 892 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0473940 | sp|Q8RX26|RGLG3_ARATH | 70.811 | 370 | 102 | 3 | 72 | 438 | 1 | 367 | 0.0 | 552 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0473940 | A0A072VBP5 | 97.032 | 438 | 13 | 0 | 1 | 438 | 18 | 455 | 0.0 | 892 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010460 | Msa0473940 | 0.802549 | 5.323112e-49 | -8.615850e-47 |
| Msa0018220 | Msa0473940 | -0.830139 | 3.474643e-55 | -8.615850e-47 |
| Msa0023150 | Msa0473940 | -0.808081 | 3.690609e-50 | -8.615850e-47 |
| Msa0052020 | Msa0473940 | -0.802268 | 6.080093e-49 | -8.615850e-47 |
| Msa0052460 | Msa0473940 | -0.806722 | 7.164355e-50 | -8.615850e-47 |
| Msa0059960 | Msa0473940 | 0.839652 | 1.393855e-57 | -8.615850e-47 |
| Msa0070990 | Msa0473940 | -0.806281 | 8.877630e-50 | -8.615850e-47 |
| Msa0094420 | Msa0473940 | -0.848224 | 7.022156e-60 | -8.615850e-47 |
| Msa0097050 | Msa0473940 | -0.832959 | 7.017194e-56 | -8.615850e-47 |
| Msa0101320 | Msa0473940 | 0.801435 | 9.015523e-49 | -8.615850e-47 |
| Msa0123170 | Msa0473940 | -0.815290 | 9.970684e-52 | -8.615850e-47 |
| Msa0141110 | Msa0473940 | 0.854324 | 1.328211e-61 | -8.615850e-47 |
| Msa0141670 | Msa0473940 | -0.803558 | 3.291813e-49 | -8.615850e-47 |
| Msa0157020 | Msa0473940 | -0.803971 | 2.701811e-49 | -8.615850e-47 |
| Msa0194570 | Msa0473940 | -0.813812 | 2.117752e-51 | -8.615850e-47 |
| Msa0199860 | Msa0473940 | 0.803319 | 3.689354e-49 | -8.615850e-47 |
| Msa0207000 | Msa0473940 | -0.801188 | 1.012812e-48 | -8.615850e-47 |
| Msa0207180 | Msa0473940 | -0.821425 | 4.065738e-53 | -8.615850e-47 |
| Msa0219660 | Msa0473940 | -0.821570 | 3.764556e-53 | -8.615850e-47 |
| Msa0222070 | Msa0473940 | -0.809470 | 1.862842e-50 | -8.615850e-47 |
| Msa0222120 | Msa0473940 | -0.812120 | 4.973540e-51 | -8.615850e-47 |
| Msa0224700 | Msa0473940 | -0.807858 | 4.116513e-50 | -8.615850e-47 |
| Msa0227290 | Msa0473940 | -0.804344 | 2.259736e-49 | -8.615850e-47 |
| Msa0227490 | Msa0473940 | -0.820879 | 5.432766e-53 | -8.615850e-47 |
| Msa0227500 | Msa0473940 | -0.829159 | 6.015494e-55 | -8.615850e-47 |
| Msa0230400 | Msa0473940 | -0.811089 | 8.335142e-51 | -8.615850e-47 |
| Msa0371610 | Msa0473940 | -0.805320 | 1.413290e-49 | -8.615850e-47 |
| Msa0374860 | Msa0473940 | 0.853293 | 2.629062e-61 | -8.615850e-47 |
| Msa0375080 | Msa0473940 | 0.856863 | 2.413142e-62 | -8.615850e-47 |
| Msa0378240 | Msa0473940 | 0.937181 | 5.257396e-98 | -8.615850e-47 |
| Msa0378340 | Msa0473940 | -0.840915 | 6.519350e-58 | -8.615850e-47 |
| Msa0380060 | Msa0473940 | -0.800016 | 1.756359e-48 | -8.615850e-47 |
| Msa0382560 | Msa0473940 | -0.824358 | 8.429794e-54 | -8.615850e-47 |
| Msa0388260 | Msa0473940 | 0.801837 | 7.457361e-49 | -8.615850e-47 |
| Msa0417630 | Msa0473940 | -0.806995 | 6.273549e-50 | -8.615850e-47 |
| Msa0418000 | Msa0473940 | -0.813538 | 2.433058e-51 | -8.615850e-47 |
| Msa0418480 | Msa0473940 | -0.813459 | 2.532071e-51 | -8.615850e-47 |
| Msa0427520 | Msa0473940 | 0.971510 | 2.815930e-133 | -8.615850e-47 |
| Msa0427690 | Msa0473940 | -0.842353 | 2.724343e-58 | -8.615850e-47 |
| Msa0429050 | Msa0473940 | 0.830390 | 3.016831e-55 | -8.615850e-47 |
| Msa0429070 | Msa0473940 | 0.823473 | 1.359056e-53 | -8.615850e-47 |
| Msa0429270 | Msa0473940 | -0.813546 | 2.423036e-51 | -8.615850e-47 |
| Msa0446480 | Msa0473940 | -0.806909 | 6.541354e-50 | -8.615850e-47 |
| Msa0465860 | Msa0473940 | -0.807657 | 4.540528e-50 | -8.615850e-47 |
| Msa0470350 | Msa0473940 | 0.860406 | 2.111409e-63 | -8.615850e-47 |
| Msa0473940 | Msa0510230 | -0.818418 | 1.980664e-52 | -8.615850e-47 |
| Msa0473940 | Msa0518340 | 0.976090 | 3.634115e-141 | -8.615850e-47 |
| Msa0473940 | Msa0518520 | -0.845128 | 4.925112e-59 | -8.615850e-47 |
| Msa0473940 | Msa0519200 | -0.813582 | 2.378991e-51 | -8.615850e-47 |
| Msa0473940 | Msa0525240 | -0.817130 | 3.868042e-52 | -8.615850e-47 |
| Msa0473940 | Msa0538570 | -0.817021 | 4.091632e-52 | -8.615850e-47 |
| Msa0473940 | Msa0542010 | -0.800652 | 1.303491e-48 | -8.615850e-47 |
| Msa0473940 | Msa0546740 | -0.800566 | 1.357214e-48 | -8.615850e-47 |
| Msa0473940 | Msa0547050 | -0.819786 | 9.673579e-53 | -8.615850e-47 |
| Msa0473940 | Msa0574170 | -0.813762 | 2.172482e-51 | -8.615850e-47 |
| Msa0473940 | Msa0575250 | -0.851879 | 6.654328e-61 | -8.615850e-47 |
| Msa0473940 | Msa0576420 | -0.833506 | 5.127801e-56 | -8.615850e-47 |
| Msa0473940 | Msa0594180 | -0.808228 | 3.433703e-50 | -8.615850e-47 |
| Msa0473940 | Msa0594390 | -0.810718 | 1.002727e-50 | -8.615850e-47 |
| Msa0473940 | Msa0600390 | -0.823036 | 1.719381e-53 | -8.615850e-47 |
| Msa0473940 | Msa0601780 | -0.813572 | 2.391268e-51 | -8.615850e-47 |
| Msa0473940 | Msa0614230 | -0.803237 | 3.836172e-49 | -8.615850e-47 |
| Msa0473940 | Msa0619330 | -0.819301 | 1.247846e-52 | -8.615850e-47 |
| Msa0473940 | Msa0621770 | -0.840769 | 7.122164e-58 | -8.615850e-47 |
| Msa0473940 | Msa0621890 | -0.812672 | 3.769196e-51 | -8.615850e-47 |
| Msa0473940 | Msa0631340 | -0.804453 | 2.144820e-49 | -8.615850e-47 |
| Msa0473940 | Msa0634270 | -0.832758 | 7.875021e-56 | -8.615850e-47 |
| Msa0473940 | Msa0640130 | -0.801386 | 9.226794e-49 | -8.615850e-47 |
| Msa0473940 | Msa0640880 | -0.824209 | 9.138694e-54 | -8.615850e-47 |
| Msa0473940 | Msa0642910 | -0.813466 | 2.523437e-51 | -8.615850e-47 |
| Msa0473940 | Msa0645050 | -0.808541 | 2.944884e-50 | -8.615850e-47 |
| Msa0473940 | Msa0648180 | -0.811075 | 8.392753e-51 | -8.615850e-47 |
| Msa0473940 | Msa0648270 | -0.801719 | 7.885401e-49 | -8.615850e-47 |
| Msa0473940 | Msa0653710 | -0.803415 | 3.524177e-49 | -8.615850e-47 |
| Msa0473940 | Msa0665910 | 0.815643 | 8.320882e-52 | -8.615850e-47 |
| Msa0473940 | Msa0678890 | -0.825949 | 3.546106e-54 | -8.615850e-47 |
| Msa0473940 | Msa0681890 | -0.811245 | 7.711564e-51 | -8.615850e-47 |
| Msa0473940 | Msa0682400 | -0.805540 | 1.270876e-49 | -8.615850e-47 |
| Msa0473940 | Msa0684530 | -0.813968 | 1.956129e-51 | -8.615850e-47 |
| Msa0473940 | Msa0691160 | -0.818534 | 1.864454e-52 | -8.615850e-47 |
| Msa0473940 | Msa0694690 | 0.864514 | 1.151289e-64 | -8.615850e-47 |
| Msa0473940 | Msa0705550 | -0.802105 | 6.568351e-49 | -8.615850e-47 |
| Msa0473940 | Msa0707780 | -0.821616 | 3.672000e-53 | -8.615850e-47 |
| Msa0473940 | Msa0709480 | -0.806319 | 8.713049e-50 | -8.615850e-47 |
| Msa0473940 | Msa0722940 | -0.841246 | 5.337686e-58 | -8.615850e-47 |
| Msa0473940 | Msa0723150 | -0.842320 | 2.779377e-58 | -8.615850e-47 |
| Msa0473940 | Msa0725480 | 0.822709 | 2.049143e-53 | -8.615850e-47 |
| Msa0473940 | Msa0730180 | -0.802072 | 6.674005e-49 | -8.615850e-47 |
| Msa0473940 | Msa0739570 | -0.824574 | 7.499474e-54 | -8.615850e-47 |
| Msa0473940 | Msa0740420 | -0.819023 | 1.443840e-52 | -8.615850e-47 |
| Msa0473940 | Msa0766100 | 0.818736 | 1.677246e-52 | -8.615850e-47 |
| Msa0473940 | Msa0782330 | -0.839511 | 1.516866e-57 | -8.615850e-47 |
| Msa0473940 | Msa0797220 | -0.804508 | 2.088427e-49 | -8.615850e-47 |
| Msa0473940 | Msa0820670 | -0.818028 | 2.426534e-52 | -8.615850e-47 |
| Msa0473940 | Msa0843290 | -0.804271 | 2.340881e-49 | -8.615850e-47 |
| Msa0473940 | Msa0860270 | -0.827971 | 1.164980e-54 | -8.615850e-47 |
| Msa0473940 | Msa0880080 | -0.808318 | 3.285838e-50 | -8.615850e-47 |
| Msa0473940 | Msa0886880 | -0.804586 | 2.011526e-49 | -8.615850e-47 |
| Msa0473940 | Msa0925160 | -0.804753 | 1.856826e-49 | -8.615850e-47 |
| Msa0473940 | Msa0930330 | -0.823747 | 1.172672e-53 | -8.615850e-47 |
| Msa0473940 | Msa0931480 | -0.818240 | 2.173784e-52 | -8.615850e-47 |
| Msa0473940 | Msa0951710 | -0.840280 | 9.562790e-58 | -8.615850e-47 |
| Msa0473940 | Msa0955260 | -0.800204 | 1.608629e-48 | -8.615850e-47 |
| Msa0473940 | Msa0981010 | -0.812108 | 5.005493e-51 | -8.615850e-47 |
| Msa0473940 | Msa0988480 | -0.816736 | 4.742770e-52 | -8.615850e-47 |
| Msa0473940 | Msa1014270 | -0.812434 | 4.248935e-51 | -8.615850e-47 |
| Msa0473940 | Msa1018720 | -0.824800 | 6.634151e-54 | -8.615850e-47 |
| Msa0473940 | Msa1022310 | -0.802925 | 4.451934e-49 | -8.615850e-47 |
| Msa0473940 | Msa1024140 | -0.815278 | 1.003373e-51 | -8.615850e-47 |
| Msa0473940 | Msa1024580 | -0.816309 | 5.908602e-52 | -8.615850e-47 |
| Msa0473940 | Msa1037060 | 0.818500 | 1.898067e-52 | -8.615850e-47 |
| Msa0473940 | Msa1055280 | -0.805386 | 1.368921e-49 | -8.615850e-47 |
| Msa0473940 | Msa1061180 | -0.827056 | 1.931376e-54 | -8.615850e-47 |
| Msa0473940 | Msa1072080 | -0.801217 | 9.990843e-49 | -8.615850e-47 |
| Msa0473940 | Msa1077940 | 0.811393 | 7.160951e-51 | -8.615850e-47 |
| Msa0473940 | Msa1106560 | -0.833431 | 5.355762e-56 | -8.615850e-47 |
| Msa0473940 | Msa1107970 | -0.807123 | 5.894392e-50 | -8.615850e-47 |
| Msa0473940 | Msa1120540 | -0.806573 | 7.704060e-50 | -8.615850e-47 |
| Msa0473940 | Msa1123340 | -0.801073 | 1.069511e-48 | -8.615850e-47 |
| Msa0473940 | Msa1125040 | -0.805209 | 1.490831e-49 | -8.615850e-47 |
| Msa0473940 | Msa1125780 | -0.805711 | 1.169860e-49 | -8.615850e-47 |
| Msa0473940 | Msa1125950 | -0.805841 | 1.098711e-49 | -8.615850e-47 |
| Msa0473940 | Msa1147200 | -0.839746 | 1.317781e-57 | -8.615850e-47 |
| Msa0473940 | Msa1149760 | -0.814897 | 1.218848e-51 | -8.615850e-47 |
| Msa0473940 | Msa1151960 | -0.810763 | 9.806370e-51 | -8.615850e-47 |
| Msa0473940 | Msa1157160 | -0.807194 | 5.693565e-50 | -8.615850e-47 |
| Msa0473940 | Msa1164800 | 0.820982 | 5.143164e-53 | -8.615850e-47 |
| Msa0473940 | Msa1167400 | -0.806636 | 7.469852e-50 | -8.615850e-47 |
| Msa0473940 | Msa1171340 | -0.807780 | 4.275455e-50 | -8.615850e-47 |
| Msa0473940 | Msa1178470 | -0.814802 | 1.280028e-51 | -8.615850e-47 |
| Msa0473940 | Msa1195860 | -0.809263 | 2.062565e-50 | -8.615850e-47 |
| Msa0473940 | Msa1201990 | -0.834314 | 3.219701e-56 | -8.615850e-47 |
| Msa0473940 | Msa1208510 | -0.822930 | 1.820149e-53 | -8.615850e-47 |
| Msa0473940 | Msa1214900 | -0.801990 | 6.935702e-49 | -8.615850e-47 |
| Msa0473940 | Msa1220230 | -0.808197 | 3.486466e-50 | -8.615850e-47 |
| Msa0473940 | Msa1220450 | 0.808754 | 2.651368e-50 | -8.615850e-47 |
| Msa0473940 | Msa1220460 | 0.812214 | 4.745571e-51 | -8.615850e-47 |
| Msa0473940 | Msa1220480 | 0.812967 | 3.247730e-51 | -8.615850e-47 |
| Msa0473940 | Msa1221570 | 0.824190 | 9.231742e-54 | -8.615850e-47 |
| Msa0473940 | Msa1223460 | -0.828366 | 9.354819e-55 | -8.615850e-47 |
| Msa0473940 | Msa1232860 | -0.847441 | 1.154093e-59 | -8.615850e-47 |
| Msa0473940 | Msa1235890 | -0.805902 | 1.066888e-49 | -8.615850e-47 |
| Msa0473940 | Msa1238480 | -0.829956 | 3.851652e-55 | -8.615850e-47 |
| Msa0473940 | Msa1248400 | -0.816510 | 5.329664e-52 | -8.615850e-47 |
| Msa0473940 | Msa1254770 | -0.858998 | 5.603126e-63 | -8.615850e-47 |
| Msa0473940 | Msa1254800 | -0.861435 | 1.027954e-63 | -8.615850e-47 |
| Msa0473940 | Msa1256280 | -0.811609 | 6.426280e-51 | -8.615850e-47 |
| Msa0473940 | Msa1258810 | -0.851357 | 9.352494e-61 | -8.615850e-47 |
| Msa0473940 | Msa1275290 | -0.825248 | 5.197542e-54 | -8.615850e-47 |
| Msa0473940 | Msa1284030 | -0.804269 | 2.342963e-49 | -8.615850e-47 |
| Msa0473940 | Msa1295010 | -0.831679 | 1.455754e-55 | -8.615850e-47 |
| Msa0473940 | Msa1302150 | -0.814514 | 1.481888e-51 | -8.615850e-47 |
| Msa0473940 | Msa1313460 | -0.817096 | 3.936646e-52 | -8.615850e-47 |
| Msa0473940 | Msa1315980 | -0.800233 | 1.586511e-48 | -8.615850e-47 |
| Msa0473940 | Msa1323060 | -0.814242 | 1.701946e-51 | -8.615850e-47 |
| Msa0473940 | Msa1327820 | -0.842951 | 1.889561e-58 | -8.615850e-47 |
| Msa0473940 | Msa1329990 | -0.814615 | 1.407858e-51 | -8.615850e-47 |
| Msa0473940 | Msa1330240 | -0.848609 | 5.495406e-60 | -8.615850e-47 |
| Msa0473940 | Msa1337190 | -0.800264 | 1.563994e-48 | -8.615850e-47 |
| Msa0473940 | Msa1350670 | -0.820352 | 7.177060e-53 | -8.615850e-47 |
| Msa0473940 | Msa1352290 | -0.804872 | 1.753221e-49 | -8.615850e-47 |
| Msa0473940 | Msa1354040 | -0.830440 | 2.933030e-55 | -8.615850e-47 |
| Msa0473940 | Msa1367940 | -0.804255 | 2.358686e-49 | -8.615850e-47 |
| Msa0473940 | Msa1369860 | -0.824507 | 7.775497e-54 | -8.615850e-47 |
| Msa0473940 | Msa1371320 | 0.804658 | 1.943359e-49 | -8.615850e-47 |
| Msa0473940 | Msa1382720 | -0.831881 | 1.297851e-55 | -8.615850e-47 |
| Msa0473940 | Msa1387090 | -0.804359 | 2.243294e-49 | -8.615850e-47 |
| Msa0473940 | Msa1399430 | -0.810420 | 1.162872e-50 | -8.615850e-47 |
| Msa0473940 | Msa1400700 | 0.806828 | 6.804359e-50 | -8.615850e-47 |
| Msa0473940 | Msa1407710 | -0.810610 | 1.058047e-50 | -8.615850e-47 |
| Msa0473940 | Msa1421810 | -0.816747 | 4.714692e-52 | -8.615850e-47 |
| Msa0473940 | Msa1423080 | -0.801986 | 6.950661e-49 | -8.615850e-47 |
| Msa0473940 | Msa1428380 | -0.808172 | 3.528297e-50 | -8.615850e-47 |
| Msa0473940 | Msa1429830 | -0.825514 | 4.497833e-54 | -8.615850e-47 |
| Msa0473940 | Msa1431000 | -0.807645 | 4.568164e-50 | -8.615850e-47 |
| Msa0473940 | Msa1435040 | -0.814484 | 1.505047e-51 | -8.615850e-47 |
| Msa0473940 | Msa1435050 | -0.845239 | 4.595921e-59 | -8.615850e-47 |
| Msa0473940 | Msa1435670 | -0.809677 | 1.681519e-50 | -8.615850e-47 |
| Msa0473940 | Msa1439670 | -0.832279 | 1.035185e-55 | -8.615850e-47 |
| Msa0473940 | Msa1439680 | -0.818576 | 1.824042e-52 | -8.615850e-47 |
| Msa0473940 | Msa1442300 | -0.824046 | 9.976874e-54 | -8.615850e-47 |
| Msa0257130 | Msa0473940 | -0.807545 | 4.796919e-50 | -8.615850e-47 |
| Msa0257930 | Msa0473940 | 0.889232 | 2.912115e-73 | -8.615850e-47 |
| Msa0260960 | Msa0473940 | -0.822178 | 2.722206e-53 | -8.615850e-47 |
| Msa0260970 | Msa0473940 | -0.820302 | 7.369688e-53 | -8.615850e-47 |
| Msa0263620 | Msa0473940 | -0.814661 | 1.375287e-51 | -8.615850e-47 |
| Msa0274780 | Msa0473940 | -0.828003 | 1.144439e-54 | -8.615850e-47 |
| Msa0288270 | Msa0473940 | -0.805790 | 1.126073e-49 | -8.615850e-47 |
| Msa0290950 | Msa0473940 | -0.827068 | 1.918543e-54 | -8.615850e-47 |
| Msa0290970 | Msa0473940 | -0.821630 | 3.646044e-53 | -8.615850e-47 |
| Msa0291040 | Msa0473940 | -0.807356 | 5.261782e-50 | -8.615850e-47 |
| Msa0291880 | Msa0473940 | 0.818786 | 1.633964e-52 | -8.615850e-47 |
| Msa0295520 | Msa0473940 | -0.847162 | 1.377121e-59 | -8.615850e-47 |
| Msa0296930 | Msa0473940 | 0.896513 | 3.432832e-76 | -8.615850e-47 |
| Msa0298970 | Msa0473940 | -0.810784 | 9.702220e-51 | -8.615850e-47 |
| Msa0301180 | Msa0473940 | -0.800818 | 1.205926e-48 | -8.615850e-47 |
| Msa0303780 | Msa0473940 | -0.806979 | 6.323956e-50 | -8.615850e-47 |
| Msa0306130 | Msa0473940 | -0.825890 | 3.662136e-54 | -8.615850e-47 |
| Msa0314790 | Msa0473940 | -0.838393 | 2.954324e-57 | -8.615850e-47 |
| Msa0315480 | Msa0473940 | -0.835084 | 2.061113e-56 | -8.615850e-47 |
| Msa0320540 | Msa0473940 | -0.836307 | 1.010101e-56 | -8.615850e-47 |
| Msa0331780 | Msa0473940 | -0.850229 | 1.943422e-60 | -8.615850e-47 |
| Msa0344070 | Msa0473940 | -0.829915 | 3.940464e-55 | -8.615850e-47 |
| Msa0358230 | Msa0473940 | -0.813424 | 2.577456e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0473940 | MtrunA17_Chr3g0130411 | 97.032 | 438 | 13 | 0 | 1 | 438 | 1 | 438 | 0.0 | 892 |
| Msa0473940 | MtrunA17_Chr3g0116661 | 61.436 | 376 | 126 | 3 | 77 | 437 | 64 | 435 | 7.43e-168 | 478 |
| Msa0473940 | MtrunA17_Chr3g0123481 | 60.500 | 400 | 134 | 5 | 62 | 437 | 71 | 470 | 9.48e-168 | 479 |
| Msa0473940 | MtrunA17_Chr6g0458051 | 58.690 | 397 | 126 | 3 | 75 | 437 | 94 | 486 | 2.27e-167 | 479 |
| Msa0473940 | MtrunA17_Chr7g0226791 | 63.536 | 362 | 123 | 4 | 85 | 437 | 84 | 445 | 2.43e-166 | 475 |
| Msa0473940 | MtrunA17_Chr8g0381321 | 59.126 | 389 | 143 | 3 | 63 | 437 | 89 | 475 | 6.21e-165 | 473 |
| Msa0473940 | MtrunA17_Chr2g0309791 | 60.615 | 358 | 132 | 2 | 80 | 437 | 67 | 415 | 1.02e-157 | 452 |
| Msa0473940 | MtrunA17_Chr2g0309781 | 60.446 | 359 | 127 | 3 | 80 | 438 | 59 | 402 | 6.17e-156 | 447 |
| Msa0473940 | MtrunA17_Chr8g0356381 | 59.733 | 375 | 137 | 4 | 67 | 438 | 43 | 406 | 3.58e-152 | 437 |
| Msa0473940 | MtrunA17_Chr2g0309821 | 60.725 | 331 | 118 | 2 | 80 | 410 | 53 | 371 | 4.07e-140 | 405 |
| Msa0473940 | MtrunA17_Chr6g0488261 | 65.836 | 281 | 92 | 2 | 83 | 363 | 4 | 280 | 1.28e-132 | 384 |
| Msa0473940 | MtrunA17_Chr6g0488251 | 58.095 | 315 | 117 | 3 | 124 | 438 | 7 | 306 | 1.14e-129 | 376 |
| Msa0473940 | MtrunA17_Chr7g0250181 | 60.227 | 176 | 48 | 3 | 137 | 293 | 8 | 180 | 4.11e-69 | 217 |
| Msa0473940 | MtrunA17_Chr7g0250151 | 60.504 | 119 | 47 | 0 | 122 | 240 | 4 | 122 | 5.83e-45 | 152 |
| Msa0473940 | MtrunA17_Chr8g0385701 | 32.121 | 330 | 166 | 16 | 39 | 342 | 279 | 576 | 2.79e-22 | 99.4 |
| Msa0473940 | MtrunA17_Chr1g0170101 | 30.375 | 293 | 151 | 12 | 87 | 357 | 283 | 544 | 2.22e-20 | 93.6 |
| Msa0473940 | MtrunA17_Chr7g0273481 | 30.627 | 271 | 135 | 11 | 87 | 335 | 323 | 562 | 5.92e-19 | 89.4 |
| Msa0473940 | MtrunA17_Chr7g0273401 | 33.880 | 183 | 91 | 6 | 110 | 279 | 1 | 166 | 3.73e-18 | 82.0 |
| Msa0473940 | MtrunA17_Chr7g0250161 | 52.941 | 68 | 30 | 1 | 240 | 305 | 17 | 84 | 1.93e-15 | 73.2 |
| Msa0473940 | MtrunA17_Chr8g0356391 | 63.636 | 44 | 16 | 0 | 394 | 437 | 511 | 554 | 6.15e-15 | 77.0 |
| Msa0473940 | MtrunA17_Chr8g0356421 | 40.698 | 86 | 48 | 1 | 352 | 437 | 427 | 509 | 1.81e-14 | 75.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0473940 | AT5G63970.2 | 70.811 | 370 | 102 | 3 | 72 | 438 | 1 | 367 | 0.0 | 552 |
| Msa0473940 | AT5G63970.1 | 70.811 | 370 | 102 | 3 | 72 | 438 | 1 | 367 | 0.0 | 552 |
| Msa0473940 | AT3G01650.2 | 61.376 | 378 | 134 | 3 | 68 | 437 | 116 | 489 | 3.11e-168 | 482 |
| Msa0473940 | AT3G01650.1 | 61.376 | 378 | 134 | 3 | 68 | 437 | 116 | 489 | 3.11e-168 | 482 |
| Msa0473940 | AT5G14420.3 | 58.961 | 385 | 135 | 2 | 73 | 437 | 87 | 468 | 4.70e-164 | 470 |
| Msa0473940 | AT5G14420.2 | 58.961 | 385 | 135 | 2 | 73 | 437 | 87 | 468 | 4.70e-164 | 470 |
| Msa0473940 | AT5G14420.4 | 58.961 | 385 | 135 | 2 | 73 | 437 | 87 | 468 | 4.70e-164 | 470 |
| Msa0473940 | AT5G14420.1 | 58.961 | 385 | 135 | 2 | 73 | 437 | 87 | 468 | 4.70e-164 | 470 |
| Msa0473940 | AT1G67800.4 | 55.665 | 406 | 161 | 4 | 46 | 437 | 33 | 433 | 1.82e-156 | 450 |
| Msa0473940 | AT1G67800.1 | 55.665 | 406 | 161 | 4 | 46 | 437 | 33 | 433 | 1.82e-156 | 450 |
| Msa0473940 | AT1G67800.3 | 55.665 | 406 | 161 | 4 | 46 | 437 | 33 | 433 | 1.82e-156 | 450 |
| Msa0473940 | AT1G67800.6 | 55.665 | 406 | 161 | 4 | 46 | 437 | 33 | 433 | 1.82e-156 | 450 |
| Msa0473940 | AT1G67800.2 | 55.665 | 406 | 161 | 4 | 46 | 437 | 53 | 453 | 3.30e-156 | 450 |
| Msa0473940 | AT1G79380.1 | 57.474 | 388 | 152 | 3 | 54 | 438 | 24 | 401 | 7.13e-156 | 447 |
| Msa0473940 | AT1G67800.5 | 61.321 | 318 | 115 | 2 | 46 | 360 | 53 | 365 | 3.41e-135 | 395 |
| Msa0473940 | AT1G24545.1 | 45.872 | 109 | 21 | 1 | 123 | 231 | 46 | 116 | 1.67e-23 | 97.4 |
| Msa0473940 | AT5G61910.4 | 30.545 | 275 | 131 | 13 | 108 | 359 | 1109 | 1346 | 8.51e-20 | 93.2 |
| Msa0473940 | AT5G61900.3 | 30.909 | 275 | 130 | 13 | 108 | 359 | 341 | 578 | 2.61e-19 | 90.9 |
| Msa0473940 | AT5G61900.1 | 30.909 | 275 | 130 | 13 | 108 | 359 | 341 | 578 | 2.61e-19 | 90.9 |
| Msa0473940 | AT5G07300.1 | 32.932 | 249 | 121 | 12 | 108 | 335 | 344 | 567 | 6.36e-19 | 89.7 |
| Msa0473940 | AT1G08860.1 | 30.400 | 250 | 126 | 10 | 108 | 335 | 344 | 567 | 3.88e-18 | 87.4 |
Find 113 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCAAATTCTGTTTCCTTCT+TGG | 0.060815 | 3_3:+76693550 | None:intergenic |
| TTATCCTCTCTCAATTATTT+TGG | 0.184417 | 3_3:-76694164 | Msa0473940:CDS |
| GCGCGTATTTGACAACTTTC+AGG | 0.205094 | 3_3:-76694083 | Msa0473940:intron |
| CATCAACCTTCTTCTTATAC+TGG | 0.227724 | 3_3:-76696149 | Msa0473940:CDS |
| AATCCGAAGGACATGGCTTT+TGG | 0.260692 | 3_3:-76693128 | Msa0473940:CDS |
| TTCTTCTTATACTGGGAGTT+TGG | 0.282403 | 3_3:-76696141 | Msa0473940:CDS |
| GATAATCTGATACCATGTTT+TGG | 0.290225 | 3_3:-76695377 | Msa0473940:CDS |
| ATGGAGATTGCTTGCTCATA+TGG | 0.297924 | 3_3:+76695431 | None:intergenic |
| CACTTTGACGATAACATTAC+TGG | 0.306302 | 3_3:-76694106 | Msa0473940:CDS |
| ACCTGTCCACTCATTGCTTT+TGG | 0.308835 | 3_3:+76695592 | None:intergenic |
| AGACAGAGTCCGGCCAATTA+TGG | 0.312266 | 3_3:+76695412 | None:intergenic |
| ATTTGCGCTTGCTGCCCTTA+TGG | 0.316033 | 3_3:-76693534 | Msa0473940:CDS |
| TGCTTTGAGAGAAGCTGGTT+TGG | 0.319024 | 3_3:-76695648 | Msa0473940:CDS |
| ACTGAACTCCCATCATAATT+AGG | 0.320439 | 3_3:+76696185 | None:intergenic |
| GAGCAAGCAATCTCCATAAT+TGG | 0.320653 | 3_3:-76695425 | Msa0473940:CDS |
| TCAATTGCTGCATCAATTAC+AGG | 0.330436 | 3_3:+76694516 | None:intergenic |
| TCTTCTTATACCGGAAGTTC+GGG | 0.334270 | 3_3:-76696095 | Msa0473940:CDS |
| CTCTTCTTATACCGGAAGTT+CGG | 0.338394 | 3_3:-76696096 | Msa0473940:CDS |
| AAGCAGGCTTAGTAGCAATA+TGG | 0.340330 | 3_3:-76696261 | Msa0473940:exon |
| AGCCGACAATTTCAGCTCAT+TGG | 0.359139 | 3_3:-76695988 | Msa0473940:CDS |
| GTTAGTATTCCCCGAACTTC+CGG | 0.363457 | 3_3:+76696085 | None:intergenic |
| CGGAAGAGCCTTCATCATAT+TGG | 0.365540 | 3_3:-76695467 | Msa0473940:CDS |
| TTAGTTGAATTGTAAAGAAA+TGG | 0.367130 | 3_3:+76692543 | None:intergenic |
| CTTCGGATTTGTTAGACAAA+TGG | 0.368918 | 3_3:+76693142 | None:intergenic |
| TTCGGATTTGTTAGACAAAT+GGG | 0.372915 | 3_3:+76693143 | None:intergenic |
| GAATCTTCAAATTTGATACT+TGG | 0.376948 | 3_3:-76695626 | Msa0473940:CDS |
| TCGTGATCTATTATTTCCTT+AGG | 0.377030 | 3_3:+76693343 | None:intergenic |
| ATTGCTTGCTCATATGGATT+AGG | 0.378072 | 3_3:+76695437 | None:intergenic |
| AATGTACCTTGCAGCAATTA+TGG | 0.383001 | 3_3:+76694264 | None:intergenic |
| ACGACTATTTATACATCAAT+GGG | 0.389954 | 3_3:+76692576 | None:intergenic |
| CCATGACAAACTCTATTATC+AGG | 0.398725 | 3_3:+76695226 | None:intergenic |
| GTTCATTGAGTAAAGTATAT+AGG | 0.399143 | 3_3:-76692470 | Msa0473940:three_prime_UTR |
| TACGACTATTTATACATCAA+TGG | 0.406535 | 3_3:+76692575 | None:intergenic |
| GTTTCTGCTTTGAGAGAAGC+TGG | 0.409122 | 3_3:-76695653 | Msa0473940:CDS |
| CAATTTCAGCTCATTGGATC+AGG | 0.420851 | 3_3:-76695982 | Msa0473940:intron |
| GTAATGGTTGCTTGTTCTTG+TGG | 0.423780 | 3_3:+76694289 | None:intergenic |
| TCTATTATTTCCTTAGGTGG+TGG | 0.431746 | 3_3:+76693349 | None:intergenic |
| ATTCCACATTTGAAACTGTC+AGG | 0.434663 | 3_3:-76695169 | Msa0473940:intron |
| AGCTTTCCATGCGGCGTACC+AGG | 0.440711 | 3_3:+76694316 | None:intergenic |
| TGTCATTATTGCTGATGGAC+AGG | 0.443974 | 3_3:-76694457 | Msa0473940:intron |
| TCTGCACTGGCTGGAGCTGT+TGG | 0.447629 | 3_3:+76693271 | None:intergenic |
| AGCAGGCTTAGTAGCAATAT+GGG | 0.454705 | 3_3:-76696260 | Msa0473940:exon |
| CTATTATTTCCTTAGGTGGT+GGG | 0.465035 | 3_3:+76693350 | None:intergenic |
| TGTGCTGCCCGGTACTGAAA+TGG | 0.465356 | 3_3:+76693506 | None:intergenic |
| GTTCTTGTCATTATTGCTGA+TGG | 0.466502 | 3_3:-76694462 | Msa0473940:CDS |
| CCCCAGGTTACTAGAAATCC+TGG | 0.468853 | 3_3:-76694334 | Msa0473940:intron |
| CAACACCCTCCTAATTATGA+TGG | 0.471709 | 3_3:-76696194 | Msa0473940:CDS |
| TATCTTTATGCCCTATGTGC+AGG | 0.472490 | 3_3:-76692676 | Msa0473940:CDS |
| TAATTTGCTGCCTGCACATA+GGG | 0.474321 | 3_3:+76692666 | None:intergenic |
| TGGAGATTCCATTTCAGTAC+CGG | 0.474482 | 3_3:-76693514 | Msa0473940:CDS |
| CATCCAAAAGCCATGTCCTT+CGG | 0.479435 | 3_3:+76693125 | None:intergenic |
| TGCTTCATATTACTGAAAGC+AGG | 0.480309 | 3_3:-76696277 | None:intergenic |
| ATCTTCACATGCTACAAGTT+CGG | 0.483413 | 3_3:-76696051 | Msa0473940:CDS |
| ATAAGAAGAGGGTTGATCAT+AGG | 0.486114 | 3_3:+76696109 | None:intergenic |
| ATCCAATGAGCTGAAATTGT+CGG | 0.486210 | 3_3:+76695986 | None:intergenic |
| ATTTCCTTAGGTGGTGGGAG+AGG | 0.495075 | 3_3:+76693355 | None:intergenic |
| CATCAAAAGTAGACAGAGTC+CGG | 0.497235 | 3_3:+76695402 | None:intergenic |
| TGATCTATTATTTCCTTAGG+TGG | 0.501463 | 3_3:+76693346 | None:intergenic |
| TGCAGCAATTATGGAAGTAA+TGG | 0.506063 | 3_3:+76694273 | None:intergenic |
| CATACTGGTTCTGCACTGGC+TGG | 0.522210 | 3_3:+76693262 | None:intergenic |
| GATCAACCCTCTTCTTATAC+CGG | 0.529411 | 3_3:-76696104 | Msa0473940:CDS |
| ATCAACCTTCTTCTTATACT+GGG | 0.532895 | 3_3:-76696148 | Msa0473940:CDS |
| AAGACCTCTCCCACCACCTA+AGG | 0.533866 | 3_3:-76693359 | Msa0473940:CDS |
| CAATTGCTGCATCAATTACA+GGG | 0.538242 | 3_3:+76694517 | None:intergenic |
| ACCAAAAGCAATGAGTGGAC+AGG | 0.538547 | 3_3:-76695593 | Msa0473940:intron |
| CTGAAATGGAATCTCCATAA+GGG | 0.542289 | 3_3:+76693520 | None:intergenic |
| AGAAATCCTGGTACGCCGCA+TGG | 0.545259 | 3_3:-76694322 | Msa0473940:CDS |
| ATTACAGGGGCAAATGAAGT+TGG | 0.548560 | 3_3:+76694531 | None:intergenic |
| ACTGAAATGGAATCTCCATA+AGG | 0.550689 | 3_3:+76693519 | None:intergenic |
| AAACTCCCAGTATAAGAAGA+AGG | 0.556963 | 3_3:+76696143 | None:intergenic |
| GTAATTTGCTGCCTGCACAT+AGG | 0.558684 | 3_3:+76692665 | None:intergenic |
| CATCATAATTAGGAGGGTGT+TGG | 0.562931 | 3_3:+76696195 | None:intergenic |
| TAGGTAAGTATTCGTTCCAT+CGG | 0.563326 | 3_3:-76695487 | Msa0473940:CDS |
| TAGCATGTGAAGATGATTGA+TGG | 0.566183 | 3_3:+76696060 | None:intergenic |
| GAACTCCCATCATAATTAGG+AGG | 0.569731 | 3_3:+76696188 | None:intergenic |
| CCTGATAATAGAGTTTGTCA+TGG | 0.570822 | 3_3:-76695226 | Msa0473940:CDS |
| GAGCCCTTCCAATATGATGA+AGG | 0.570882 | 3_3:+76695459 | None:intergenic |
| GGAGATTCCATTTCAGTACC+GGG | 0.571735 | 3_3:-76693513 | Msa0473940:CDS |
| AGAGCCTTCATCATATTGGA+AGG | 0.572099 | 3_3:-76695463 | Msa0473940:CDS |
| AAGTGCTTCATCTCGTCCCA+TGG | 0.572627 | 3_3:+76694124 | None:intergenic |
| AAATTGTCGGCTATATATGC+TGG | 0.574282 | 3_3:+76695999 | None:intergenic |
| AAGCAATCTCCATAATTGGC+CGG | 0.575523 | 3_3:-76695421 | Msa0473940:CDS |
| GAAACATACTGGTTCTGCAC+TGG | 0.575744 | 3_3:+76693258 | None:intergenic |
| TCTAACAAATCCGAAGGACA+TGG | 0.577510 | 3_3:-76693135 | Msa0473940:CDS |
| TATGATGAAGGCTCTTCCGA+TGG | 0.578630 | 3_3:+76695471 | None:intergenic |
| GAATCGAAATTTGTTATGCG+TGG | 0.586429 | 3_3:+76693301 | None:intergenic |
| CGAACTTCCGGTATAAGAAG+AGG | 0.587264 | 3_3:+76696097 | None:intergenic |
| TTGGAGTTGGAGATGGACCA+TGG | 0.589444 | 3_3:-76694141 | Msa0473940:CDS |
| ATTTCACCAAAAGCAATGAG+TGG | 0.597202 | 3_3:-76695598 | Msa0473940:CDS |
| AACACCCTCCTAATTATGAT+GGG | 0.599452 | 3_3:-76696193 | Msa0473940:CDS |
| GAACTTCCGGTATAAGAAGA+GGG | 0.604425 | 3_3:+76696098 | None:intergenic |
| AACTCCCATCATAATTAGGA+GGG | 0.620871 | 3_3:+76696189 | None:intergenic |
| ACTTTGACGATAACATTACT+GGG | 0.621667 | 3_3:-76694105 | Msa0473940:CDS |
| TGATGCAGCAATTGACATTG+TGG | 0.622992 | 3_3:-76694508 | Msa0473940:CDS |
| TCGGATTTGTTAGACAAATG+GGG | 0.624504 | 3_3:+76693144 | None:intergenic |
| GACATTGTGGAACGAAACAA+CGG | 0.625993 | 3_3:-76694495 | Msa0473940:CDS |
| CCATCACCAAACCCAAAACA+TGG | 0.626028 | 3_3:+76695365 | None:intergenic |
| AAACCTGACAGTTTCAAATG+TGG | 0.629100 | 3_3:+76695166 | None:intergenic |
| AAAGATCATGTCTGAGAACA+CGG | 0.629668 | 3_3:-76693579 | Msa0473940:CDS |
| TGGAGTTGGAGATGGACCAT+GGG | 0.631244 | 3_3:-76694140 | Msa0473940:CDS |
| CTGGTTGCTTGTTATGACGA+TGG | 0.637709 | 3_3:+76696018 | None:intergenic |
| TTACTTCCATAATTGCTGCA+AGG | 0.643987 | 3_3:-76694270 | Msa0473940:intron |
| CCAACCAAAATAATTGAGAG+AGG | 0.646003 | 3_3:+76694160 | None:intergenic |
| GAGCCTTCATCATATTGGAA+GGG | 0.649815 | 3_3:-76695462 | Msa0473940:CDS |
| ATGTAGACTTGCAAGGAGTG+TGG | 0.650354 | 3_3:-76692707 | Msa0473940:intron |
| GACTATTTATACATCAATGG+GGG | 0.651903 | 3_3:+76692578 | None:intergenic |
| GAACACGGAAGCATCCAAGA+AGG | 0.652615 | 3_3:-76693564 | Msa0473940:CDS |
| CATTTGTCTAACAAATCCGA+AGG | 0.659505 | 3_3:-76693141 | Msa0473940:CDS |
| CGACTATTTATACATCAATG+GGG | 0.674760 | 3_3:+76692577 | None:intergenic |
| CTTCTTATACCGGAAGTTCG+GGG | 0.677113 | 3_3:-76696094 | Msa0473940:CDS |
| CATGTGAAGATGATTGATGG+TGG | 0.687554 | 3_3:+76696063 | None:intergenic |
| TGTGGACTAAGCTTTCCATG+CGG | 0.719964 | 3_3:+76694307 | None:intergenic |
| AATTGCTGCATCAATTACAG+GGG | 0.724712 | 3_3:+76694518 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATCCTAATAATAAATATT+AGG | - | chr3_3:76693858-76693877 | Msa0473940:intron | 10.0% |
| !! | AAATCCTAATATTTATTATT+AGG | + | chr3_3:76693865-76693884 | None:intergenic | 10.0% |
| !!! | TTAAAATTTCATTCTTTTTA+CGG | + | chr3_3:76695764-76695783 | None:intergenic | 10.0% |
| !!! | TACAATAAGTTCATTTTAAA+AGG | + | chr3_3:76693160-76693179 | None:intergenic | 15.0% |
| !!! | CTTTTTTATTTCTTTCAAAT+AGG | - | chr3_3:76693618-76693637 | Msa0473940:intron | 15.0% |
| !! | GCATTATAATTTATTGTATA+CGG | - | chr3_3:76693670-76693689 | Msa0473940:intron | 15.0% |
| !!! | AAGATTAATTTTCTAAGATA+CGG | + | chr3_3:76695034-76695053 | None:intergenic | 15.0% |
| !! | AAACTACAGAAATTATAAAA+TGG | + | chr3_3:76695112-76695131 | None:intergenic | 15.0% |
| !! | ACTTATTGTATATGCATATA+TGG | - | chr3_3:76693170-76693189 | Msa0473940:intron | 20.0% |
| !! | AAATATTAGGATTTGATTCT+TGG | - | chr3_3:76693871-76693890 | Msa0473940:intron | 20.0% |
| !!! | TTCTAGAAAAAACAATAGAA+AGG | + | chr3_3:76694355-76694374 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTGCTGTTGTTTA+TGG | - | chr3_3:76694496-76694515 | Msa0473940:CDS | 20.0% |
| !!! | GTTGTGGATTAATAATATAA+TGG | - | chr3_3:76695261-76695280 | Msa0473940:CDS | 20.0% |
| !! | TTAACATATTCTTGTATTGA+AGG | - | chr3_3:76695551-76695570 | Msa0473940:intron | 20.0% |
| !!! | TAAATAGCTTTTCCAAAAAA+TGG | + | chr3_3:76695722-76695741 | None:intergenic | 20.0% |
| !! | TTAGTTGAATTGTAAAGAAA+TGG | + | chr3_3:76696182-76696201 | None:intergenic | 20.0% |
| !! | AAAGTATATAGGAAAAATGA+AGG | - | chr3_3:76696263-76696282 | Msa0473940:exon | 20.0% |
| ! | ATGTGAAGGCTAATTAATAT+TGG | + | chr3_3:76692823-76692842 | None:intergenic | 25.0% |
| ! | GAATCTTCAAATTTGATACT+TGG | - | chr3_3:76693096-76693115 | Msa0473940:intron | 25.0% |
| !! | ATAATCTGATACCATGTTTT+GGG | - | chr3_3:76693346-76693365 | Msa0473940:CDS | 25.0% |
| ! | ATGCATTGAAATCAACAAAA+GGG | + | chr3_3:76693429-76693448 | None:intergenic | 25.0% |
| ! | AATGCATTGAAATCAACAAA+AGG | + | chr3_3:76693430-76693449 | None:intergenic | 25.0% |
| ! | AACAAAAAGGTTAACTTAGA+AGG | + | chr3_3:76693988-76694007 | None:intergenic | 25.0% |
| !! | TCTAAGTTAACCTTTTTGTT+TGG | - | chr3_3:76693988-76694007 | Msa0473940:intron | 25.0% |
| !! | TATGGTATTTGTCTTTTATG+TGG | - | chr3_3:76694514-76694533 | Msa0473940:CDS | 25.0% |
| !! | TTATCCTCTCTCAATTATTT+TGG | - | chr3_3:76694558-76694577 | Msa0473940:intron | 25.0% |
| ! | ATTTGTCGTATAAATGACAA+AGG | - | chr3_3:76694741-76694760 | Msa0473940:intron | 25.0% |
| ! | TTATTAATCCACAACTTACT+TGG | + | chr3_3:76695256-76695275 | None:intergenic | 25.0% |
| !!! | CTTTTATGTTGATAATGAAC+TGG | + | chr3_3:76695346-76695365 | None:intergenic | 25.0% |
| !! | AAATTTCATTCTTTTTACGG+TGG | + | chr3_3:76695761-76695780 | None:intergenic | 25.0% |
| ! | TGAAAATAGAATGGTTCTTT+CGG | + | chr3_3:76695880-76695899 | None:intergenic | 25.0% |
| ! | TGCACATTAATGTTTATGTT+TGG | - | chr3_3:76695934-76695953 | Msa0473940:intron | 25.0% |
| !!! | TTTTTTTATGTAGACTTGCA+AGG | - | chr3_3:76696008-76696027 | Msa0473940:CDS | 25.0% |
| ! | ACGACTATTTATACATCAAT+GGG | + | chr3_3:76696149-76696168 | None:intergenic | 25.0% |
| ! | TACGACTATTTATACATCAA+TGG | + | chr3_3:76696150-76696169 | None:intergenic | 25.0% |
| ! | GTTCATTGAGTAAAGTATAT+AGG | - | chr3_3:76696252-76696271 | Msa0473940:exon | 25.0% |
| ATCAACCTTCTTCTTATACT+GGG | - | chr3_3:76692574-76692593 | Msa0473940:three_prime_UTR | 30.0% | |
| ATAGAGCATATTAGCAGTAA+AGG | - | chr3_3:76692792-76692811 | Msa0473940:intron | 30.0% | |
| TAGAGCATATTAGCAGTAAA+GGG | - | chr3_3:76692793-76692812 | Msa0473940:intron | 30.0% | |
| ATAGAGCATATTAGCAGTAA+AGG | - | chr3_3:76692792-76692811 | Msa0473940:intron | 30.0% | |
| TAGAGCATATTAGCAGTAAA+GGG | - | chr3_3:76692793-76692812 | Msa0473940:intron | 30.0% | |
| TAGTTAAGTCTAACATGTGA+AGG | + | chr3_3:76693002-76693021 | None:intergenic | 30.0% | |
| AGAAGATTTATGACACTTTC+AGG | - | chr3_3:76693044-76693063 | Msa0473940:intron | 30.0% | |
| AGTCACACTGTGATAATTAT+AGG | - | chr3_3:76693216-76693235 | Msa0473940:intron | 30.0% | |
| ! | GATAATCTGATACCATGTTT+TGG | - | chr3_3:76693345-76693364 | Msa0473940:CDS | 30.0% |
| GCTATGTTGAATTTGTGATT+AGG | - | chr3_3:76693752-76693771 | Msa0473940:intron | 30.0% | |
| CTTGTTGACAACTTATTGTT+TGG | - | chr3_3:76693948-76693967 | Msa0473940:intron | 30.0% | |
| !! | TAACCTTTTTGTTTGGATGT+TGG | - | chr3_3:76693995-76694014 | Msa0473940:intron | 30.0% |
| TTTGGATGTTGGTACATAAT+AGG | - | chr3_3:76694006-76694025 | Msa0473940:intron | 30.0% | |
| AAATATCAAGAGAAAGTCTG+TGG | + | chr3_3:76694036-76694055 | None:intergenic | 30.0% | |
| TTACCTCACAATTCAAGATA+TGG | + | chr3_3:76694091-76694110 | None:intergenic | 30.0% | |
| AATTGTGAGGTAACTTGAAT+TGG | - | chr3_3:76694098-76694117 | Msa0473940:CDS | 30.0% | |
| !! | AACTCCCTCATTTTTGTTAT+AGG | - | chr3_3:76694167-76694186 | Msa0473940:CDS | 30.0% |
| !! | ACTCCCTCATTTTTGTTATA+GGG | - | chr3_3:76694168-76694187 | Msa0473940:CDS | 30.0% |
| ! | AAGAAAGCACATCATGAAAT+GGG | + | chr3_3:76694318-76694337 | None:intergenic | 30.0% |
| ! | AAAGAAAGCACATCATGAAA+TGG | + | chr3_3:76694319-76694338 | None:intergenic | 30.0% |
| AGAAAAAACAATAGAAAGGC+AGG | + | chr3_3:76694351-76694370 | None:intergenic | 30.0% | |
| !!! | TCAATTATTTTGGTTGGAGT+TGG | - | chr3_3:76694568-76694587 | Msa0473940:intron | 30.0% |
| ACTTTGACGATAACATTACT+GGG | - | chr3_3:76694617-76694636 | Msa0473940:intron | 30.0% | |
| CCTTTAATATCTCTCTACAA+AGG | + | chr3_3:76694715-76694734 | None:intergenic | 30.0% | |
| CCTTTGTAGAGAGATATTAA+AGG | - | chr3_3:76694712-76694731 | Msa0473940:intron | 30.0% | |
| TAGAGAGATATTAAAGGATC+AGG | - | chr3_3:76694718-76694737 | Msa0473940:intron | 30.0% | |
| AATGTAAGATGCCTTACAAA+TGG | - | chr3_3:76694852-76694871 | Msa0473940:intron | 30.0% | |
| ATGTAAGATGCCTTACAAAT+GGG | - | chr3_3:76694853-76694872 | Msa0473940:intron | 30.0% | |
| ATTAGGTAAACCCATTTGTA+AGG | + | chr3_3:76694866-76694885 | None:intergenic | 30.0% | |
| TTACCTAATGTCTGATACTA+TGG | - | chr3_3:76694877-76694896 | Msa0473940:intron | 30.0% | |
| TAACCATAGTATCAGACATT+AGG | + | chr3_3:76694883-76694902 | None:intergenic | 30.0% | |
| CTGATACTATGGTTAGATTA+TGG | - | chr3_3:76694888-76694907 | Msa0473940:intron | 30.0% | |
| ATACTATGGTTAGATTATGG+AGG | - | chr3_3:76694891-76694910 | Msa0473940:intron | 30.0% | |
| ATGATTATCACAAAACAGCA+TGG | + | chr3_3:76694981-76695000 | None:intergenic | 30.0% | |
| GTTCTGTATTACTAGATTCA+AGG | - | chr3_3:76695283-76695302 | Msa0473940:intron | 30.0% | |
| TGATCTATTATTTCCTTAGG+TGG | + | chr3_3:76695379-76695398 | None:intergenic | 30.0% | |
| TCGTGATCTATTATTTCCTT+AGG | + | chr3_3:76695382-76695401 | None:intergenic | 30.0% | |
| !! | TTCGGATTTGTTAGACAAAT+GGG | + | chr3_3:76695582-76695601 | None:intergenic | 30.0% |
| TGTGCAAATAGTAAAACTTG+AGG | - | chr3_3:76695652-76695671 | Msa0473940:CDS | 30.0% | |
| !!! | TTTCACTAAGCACCATTTTT+TGG | - | chr3_3:76695707-76695726 | Msa0473940:intron | 30.0% |
| ! | GTGAACATTTTGAATGTCAT+TGG | - | chr3_3:76695828-76695847 | Msa0473940:intron | 30.0% |
| GACTATTTATACATCAATGG+GGG | + | chr3_3:76696147-76696166 | None:intergenic | 30.0% | |
| CGACTATTTATACATCAATG+GGG | + | chr3_3:76696148-76696167 | None:intergenic | 30.0% | |
| ! | CTCAATGAACACTTTGTTTA+AGG | + | chr3_3:76696242-76696261 | None:intergenic | 30.0% |
| AACACCCTCCTAATTATGAT+GGG | - | chr3_3:76692529-76692548 | Msa0473940:three_prime_UTR | 35.0% | |
| AACTCCCATCATAATTAGGA+GGG | + | chr3_3:76692536-76692555 | None:intergenic | 35.0% | |
| ACTGAACTCCCATCATAATT+AGG | + | chr3_3:76692540-76692559 | None:intergenic | 35.0% | |
| CATCAACCTTCTTCTTATAC+TGG | - | chr3_3:76692573-76692592 | Msa0473940:three_prime_UTR | 35.0% | |
| AAACTCCCAGTATAAGAAGA+AGG | + | chr3_3:76692582-76692601 | None:intergenic | 35.0% | |
| TTCTTCTTATACTGGGAGTT+TGG | - | chr3_3:76692581-76692600 | Msa0473940:three_prime_UTR | 35.0% | |
| ! | ATAAGAAGAGGGTTGATCAT+AGG | + | chr3_3:76692616-76692635 | None:intergenic | 35.0% |
| TAGCATGTGAAGATGATTGA+TGG | + | chr3_3:76692665-76692684 | None:intergenic | 35.0% | |
| ATCTTCACATGCTACAAGTT+CGG | - | chr3_3:76692671-76692690 | Msa0473940:CDS | 35.0% | |
| ! | AAATTGTCGGCTATATATGC+TGG | + | chr3_3:76692726-76692745 | None:intergenic | 35.0% |
| ATCCAATGAGCTGAAATTGT+CGG | + | chr3_3:76692739-76692758 | None:intergenic | 35.0% | |
| AGAGCATATTAGCAGTAAAG+GGG | - | chr3_3:76692794-76692813 | Msa0473940:intron | 35.0% | |
| TAGTCAAGTCTAACATGTGA+AGG | + | chr3_3:76692837-76692856 | None:intergenic | 35.0% | |
| AGAGCATATTAGCAGTAAAG+GGG | - | chr3_3:76692794-76692813 | Msa0473940:intron | 35.0% | |
| ATTTCACCAAAAGCAATGAG+TGG | - | chr3_3:76693124-76693143 | Msa0473940:CDS | 35.0% | |
| TAGGTAAGTATTCGTTCCAT+CGG | - | chr3_3:76693235-76693254 | Msa0473940:intron | 35.0% | |
| ATTGCTTGCTCATATGGATT+AGG | + | chr3_3:76693288-76693307 | None:intergenic | 35.0% | |
| !! | TAAATTCAGAAGCATCTGCT+TGG | + | chr3_3:76693389-76693408 | None:intergenic | 35.0% |
| CCATGACAAACTCTATTATC+AGG | + | chr3_3:76693499-76693518 | None:intergenic | 35.0% | |
| CCTGATAATAGAGTTTGTCA+TGG | - | chr3_3:76693496-76693515 | Msa0473940:CDS | 35.0% | |
| !! | TAGAGTTTGTCATGGTTTTG+AGG | - | chr3_3:76693504-76693523 | Msa0473940:CDS | 35.0% |
| ! | ATTCCACATTTGAAACTGTC+AGG | - | chr3_3:76693553-76693572 | Msa0473940:CDS | 35.0% |
| AAACCTGACAGTTTCAAATG+TGG | + | chr3_3:76693559-76693578 | None:intergenic | 35.0% | |
| ! | CTGTCTGTCTAGAATAACTA+TGG | + | chr3_3:76693648-76693667 | None:intergenic | 35.0% |
| ! | TTTTACGTAACTTTGAGCCT+AGG | - | chr3_3:76693718-76693737 | Msa0473940:intron | 35.0% |
| TTAACTTAGAAGGAGAGCTT+TGG | + | chr3_3:76693978-76693997 | None:intergenic | 35.0% | |
| GTACCAACATCCAAACAAAA+AGG | + | chr3_3:76694001-76694020 | None:intergenic | 35.0% | |
| GATGTTGGTACATAATAGGA+TGG | - | chr3_3:76694010-76694029 | Msa0473940:intron | 35.0% | |
| TTGCCATATCTTGAATTGTG+AGG | - | chr3_3:76694085-76694104 | Msa0473940:CDS | 35.0% | |
| TGGCCCTATAACAAAAATGA+GGG | + | chr3_3:76694174-76694193 | None:intergenic | 35.0% | |
| TTGGCCCTATAACAAAAATG+AGG | + | chr3_3:76694175-76694194 | None:intergenic | 35.0% | |
| AATTGCTGCATCAATTACAG+GGG | + | chr3_3:76694207-76694226 | None:intergenic | 35.0% | |
| CAATTGCTGCATCAATTACA+GGG | + | chr3_3:76694208-76694227 | None:intergenic | 35.0% | |
| TCAATTGCTGCATCAATTAC+AGG | + | chr3_3:76694209-76694228 | None:intergenic | 35.0% | |
| GTTCTTGTCATTATTGCTGA+TGG | - | chr3_3:76694260-76694279 | Msa0473940:intron | 35.0% | |
| ! | AGAAAGCACATCATGAAATG+GGG | + | chr3_3:76694317-76694336 | None:intergenic | 35.0% |
| TGCAGCAATTATGGAAGTAA+TGG | + | chr3_3:76694452-76694471 | None:intergenic | 35.0% | |
| TTACTTCCATAATTGCTGCA+AGG | - | chr3_3:76694452-76694471 | Msa0473940:intron | 35.0% | |
| AATGTACCTTGCAGCAATTA+TGG | + | chr3_3:76694461-76694480 | None:intergenic | 35.0% | |
| CCAACCAAAATAATTGAGAG+AGG | + | chr3_3:76694565-76694584 | None:intergenic | 35.0% | |
| !!! | CCTCTCTCAATTATTTTGGT+TGG | - | chr3_3:76694562-76694581 | Msa0473940:intron | 35.0% |
| CACTTTGACGATAACATTAC+TGG | - | chr3_3:76694616-76694635 | Msa0473940:intron | 35.0% | |
| TACCATAAACGCAGCAATAT+CGG | + | chr3_3:76694685-76694704 | None:intergenic | 35.0% | |
| ! | GTTTTGTGAAACTGTTCTCA+TGG | - | chr3_3:76694790-76694809 | Msa0473940:intron | 35.0% |
| !!! | TTTTCTAAGATACGGAATGC+TGG | + | chr3_3:76695026-76695045 | None:intergenic | 35.0% |
| AAAGATCATGTCTGAGAACA+CGG | - | chr3_3:76695143-76695162 | Msa0473940:intron | 35.0% | |
| CTGAAATGGAATCTCCATAA+GGG | + | chr3_3:76695205-76695224 | None:intergenic | 35.0% | |
| ACTGAAATGGAATCTCCATA+AGG | + | chr3_3:76695206-76695225 | None:intergenic | 35.0% | |
| CTATTATTTCCTTAGGTGGT+GGG | + | chr3_3:76695375-76695394 | None:intergenic | 35.0% | |
| TCTATTATTTCCTTAGGTGG+TGG | + | chr3_3:76695376-76695395 | None:intergenic | 35.0% | |
| !! | GAATCGAAATTTGTTATGCG+TGG | + | chr3_3:76695424-76695443 | None:intergenic | 35.0% |
| CATAGCAGTAGAAAGATACA+GGG | + | chr3_3:76695499-76695518 | None:intergenic | 35.0% | |
| TCATAGCAGTAGAAAGATAC+AGG | + | chr3_3:76695500-76695519 | None:intergenic | 35.0% | |
| !! | TCGGATTTGTTAGACAAATG+GGG | + | chr3_3:76695581-76695600 | None:intergenic | 35.0% |
| !! | CTTCGGATTTGTTAGACAAA+TGG | + | chr3_3:76695583-76695602 | None:intergenic | 35.0% |
| CATTTGTCTAACAAATCCGA+AGG | - | chr3_3:76695581-76695600 | Msa0473940:intron | 35.0% | |
| AAATAGAATGGTTCTTTCGG+TGG | + | chr3_3:76695877-76695896 | None:intergenic | 35.0% | |
| !! | GAATCAGATCCACTTTTACA+TGG | + | chr3_3:76695963-76695982 | None:intergenic | 35.0% |
| AGAAATGTTGAGTGTAAACG+TGG | - | chr3_3:76696215-76696234 | Msa0473940:CDS | 35.0% | |
| AAGCAGGCTTAGTAGCAATA+TGG | - | chr3_3:76692461-76692480 | Msa0473940:three_prime_UTR | 40.0% | |
| AGCAGGCTTAGTAGCAATAT+GGG | - | chr3_3:76692462-76692481 | Msa0473940:three_prime_UTR | 40.0% | |
| ! | CATCATAATTAGGAGGGTGT+TGG | + | chr3_3:76692530-76692549 | None:intergenic | 40.0% |
| CAACACCCTCCTAATTATGA+TGG | - | chr3_3:76692528-76692547 | Msa0473940:three_prime_UTR | 40.0% | |
| GAACTCCCATCATAATTAGG+AGG | + | chr3_3:76692537-76692556 | None:intergenic | 40.0% | |
| GATCAACCCTCTTCTTATAC+CGG | - | chr3_3:76692618-76692637 | Msa0473940:three_prime_UTR | 40.0% | |
| GAACTTCCGGTATAAGAAGA+GGG | + | chr3_3:76692627-76692646 | None:intergenic | 40.0% | |
| CTCTTCTTATACCGGAAGTT+CGG | - | chr3_3:76692626-76692645 | Msa0473940:exon | 40.0% | |
| TCTTCTTATACCGGAAGTTC+GGG | - | chr3_3:76692627-76692646 | Msa0473940:exon | 40.0% | |
| CATGTGAAGATGATTGATGG+TGG | + | chr3_3:76692662-76692681 | None:intergenic | 40.0% | |
| CAATTTCAGCTCATTGGATC+AGG | - | chr3_3:76692740-76692759 | Msa0473940:intron | 40.0% | |
| AATCGATGCAGCTTGAAAAG+GGG | + | chr3_3:76692944-76692963 | None:intergenic | 40.0% | |
| CAATCGATGCAGCTTGAAAA+GGG | + | chr3_3:76692945-76692964 | None:intergenic | 40.0% | |
| ACAATCGATGCAGCTTGAAA+AGG | + | chr3_3:76692946-76692965 | None:intergenic | 40.0% | |
| AGAGCCTTCATCATATTGGA+AGG | - | chr3_3:76693259-76693278 | Msa0473940:intron | 40.0% | |
| GAGCCTTCATCATATTGGAA+GGG | - | chr3_3:76693260-76693279 | Msa0473940:intron | 40.0% | |
| ATGGAGATTGCTTGCTCATA+TGG | + | chr3_3:76693294-76693313 | None:intergenic | 40.0% | |
| GAGCAAGCAATCTCCATAAT+TGG | - | chr3_3:76693297-76693316 | Msa0473940:CDS | 40.0% | |
| AAGCAATCTCCATAATTGGC+CGG | - | chr3_3:76693301-76693320 | Msa0473940:CDS | 40.0% | |
| CATCAAAAGTAGACAGAGTC+CGG | + | chr3_3:76693323-76693342 | None:intergenic | 40.0% | |
| !!! | CTGATACCATGTTTTGGGTT+TGG | - | chr3_3:76693351-76693370 | Msa0473940:CDS | 40.0% |
| TAACTTTGAGCCTAGGATTG+AGG | - | chr3_3:76693725-76693744 | Msa0473940:intron | 40.0% | |
| CTTGGATTCTAACAAGCTAC+TGG | - | chr3_3:76693889-76693908 | Msa0473940:intron | 40.0% | |
| GAGTTAGCATAGCATCAAAC+AGG | + | chr3_3:76693922-76693941 | None:intergenic | 40.0% | |
| ATTACAGGGGCAAATGAAGT+TGG | + | chr3_3:76694194-76694213 | None:intergenic | 40.0% | |
| TGATGCAGCAATTGACATTG+TGG | - | chr3_3:76694214-76694233 | Msa0473940:intron | 40.0% | |
| GACATTGTGGAACGAAACAA+CGG | - | chr3_3:76694227-76694246 | Msa0473940:intron | 40.0% | |
| ! | TGTCATTATTGCTGATGGAC+AGG | - | chr3_3:76694265-76694284 | Msa0473940:intron | 40.0% |
| ! | GAATGTTTTTCTTTTCCCCC+AGG | - | chr3_3:76694372-76694391 | Msa0473940:intron | 40.0% |
| !! | ACCAGGATTTCTAGTAACCT+GGG | + | chr3_3:76694392-76694411 | None:intergenic | 40.0% |
| !! | TACCAGGATTTCTAGTAACC+TGG | + | chr3_3:76694393-76694412 | None:intergenic | 40.0% |
| GTAATGGTTGCTTGTTCTTG+TGG | + | chr3_3:76694436-76694455 | None:intergenic | 40.0% | |
| !!! | ATTTTGGTTGGAGTTGGAGA+TGG | - | chr3_3:76694574-76694593 | Msa0473940:intron | 40.0% |
| ATCCGATATTGCTGCGTTTA+TGG | - | chr3_3:76694680-76694699 | Msa0473940:intron | 40.0% | |
| GTTAGATTATGGAGGACAGT+GGG | - | chr3_3:76694899-76694918 | Msa0473940:intron | 40.0% | |
| CGCAAATTCTGTTTCCTTCT+TGG | + | chr3_3:76695175-76695194 | None:intergenic | 40.0% | |
| TGGAGATTCCATTTCAGTAC+CGG | - | chr3_3:76695208-76695227 | Msa0473940:CDS | 40.0% | |
| ! | GTTGTATATTTTGTGCTGCC+CGG | + | chr3_3:76695230-76695249 | None:intergenic | 40.0% |
| ACAACTTGCCAAGTAAGTTG+TGG | - | chr3_3:76695245-76695264 | Msa0473940:CDS | 40.0% | |
| CATAAACGGGATTTGACACT+CGG | + | chr3_3:76695313-76695332 | None:intergenic | 40.0% | |
| TGGTTCACTACTGCATAAAC+GGG | + | chr3_3:76695326-76695345 | None:intergenic | 40.0% | |
| CTGGTTCACTACTGCATAAA+CGG | + | chr3_3:76695327-76695346 | None:intergenic | 40.0% | |
| TCTAACAAATCCGAAGGACA+TGG | - | chr3_3:76695587-76695606 | Msa0473940:intron | 40.0% | |
| !! | ACGTGTGTGATTTTGATCGA+AGG | + | chr3_3:76695808-76695827 | None:intergenic | 40.0% |
| !! | TCAGATCCACTTTTACATGG+AGG | + | chr3_3:76695960-76695979 | None:intergenic | 40.0% |
| TATCTTTATGCCCTATGTGC+AGG | - | chr3_3:76696046-76696065 | Msa0473940:CDS | 40.0% | |
| !! | TAATTTGCTGCCTGCACATA+GGG | + | chr3_3:76696059-76696078 | None:intergenic | 40.0% |
| CGAACTTCCGGTATAAGAAG+AGG | + | chr3_3:76692628-76692647 | None:intergenic | 45.0% | |
| CTTCTTATACCGGAAGTTCG+GGG | - | chr3_3:76692628-76692647 | Msa0473940:exon | 45.0% | |
| GTTAGTATTCCCCGAACTTC+CGG | + | chr3_3:76692640-76692659 | None:intergenic | 45.0% | |
| !! | CTGGTTGCTTGTTATGACGA+TGG | + | chr3_3:76692707-76692726 | None:intergenic | 45.0% |
| AGCCGACAATTTCAGCTCAT+TGG | - | chr3_3:76692734-76692753 | Msa0473940:intron | 45.0% | |
| !! | GTTTCTGCTTTGAGAGAAGC+TGG | - | chr3_3:76693069-76693088 | Msa0473940:intron | 45.0% |
| !! | TGCTTTGAGAGAAGCTGGTT+TGG | - | chr3_3:76693074-76693093 | Msa0473940:intron | 45.0% |
| ACCAAAAGCAATGAGTGGAC+AGG | - | chr3_3:76693129-76693148 | Msa0473940:CDS | 45.0% | |
| ! | ACCTGTCCACTCATTGCTTT+TGG | + | chr3_3:76693133-76693152 | None:intergenic | 45.0% |
| TATGATGAAGGCTCTTCCGA+TGG | + | chr3_3:76693254-76693273 | None:intergenic | 45.0% | |
| CGGAAGAGCCTTCATCATAT+TGG | - | chr3_3:76693255-76693274 | Msa0473940:intron | 45.0% | |
| GAGCCCTTCCAATATGATGA+AGG | + | chr3_3:76693266-76693285 | None:intergenic | 45.0% | |
| CCATCACCAAACCCAAAACA+TGG | + | chr3_3:76693360-76693379 | None:intergenic | 45.0% | |
| !!! | CCATGTTTTGGGTTTGGTGA+TGG | - | chr3_3:76693357-76693376 | Msa0473940:CDS | 45.0% |
| CATAGCTCAACCTCAATCCT+AGG | + | chr3_3:76693738-76693757 | None:intergenic | 45.0% | |
| !! | CAGGATTTCTAGTAACCTGG+GGG | + | chr3_3:76694390-76694409 | None:intergenic | 45.0% |
| !! | CCAGGATTTCTAGTAACCTG+GGG | + | chr3_3:76694391-76694410 | None:intergenic | 45.0% |
| ! | TGTGGACTAAGCTTTCCATG+CGG | + | chr3_3:76694418-76694437 | None:intergenic | 45.0% |
| GCGCGTATTTGACAACTTTC+AGG | - | chr3_3:76694639-76694658 | Msa0473940:intron | 45.0% | |
| GGTTAGATTATGGAGGACAG+TGG | - | chr3_3:76694898-76694917 | Msa0473940:intron | 45.0% | |
| GGAGATTCCATTTCAGTACC+GGG | - | chr3_3:76695209-76695228 | Msa0473940:CDS | 45.0% | |
| !! | GAAACATACTGGTTCTGCAC+TGG | + | chr3_3:76695467-76695486 | None:intergenic | 45.0% |
| ! | AATCCGAAGGACATGGCTTT+TGG | - | chr3_3:76695594-76695613 | Msa0473940:CDS | 45.0% |
| CATCCAAAAGCCATGTCCTT+CGG | + | chr3_3:76695600-76695619 | None:intergenic | 45.0% | |
| ! | AAGGACATGGCTTTTGGATG+CGG | - | chr3_3:76695600-76695619 | Msa0473940:CDS | 45.0% |
| ! | CTTGGCGGGTGAAAATAGAA+TGG | + | chr3_3:76695889-76695908 | None:intergenic | 45.0% |
| ! | TTCTATTTTCACCCGCCAAG+TGG | - | chr3_3:76695889-76695908 | Msa0473940:intron | 45.0% |
| GTTTGGCCTCCATGTAAAAG+TGG | - | chr3_3:76695951-76695970 | Msa0473940:intron | 45.0% | |
| ATGTAGACTTGCAAGGAGTG+TGG | - | chr3_3:76696015-76696034 | Msa0473940:CDS | 45.0% | |
| !! | GTAATTTGCTGCCTGCACAT+AGG | + | chr3_3:76696060-76696079 | None:intergenic | 45.0% |
| AGACAGAGTCCGGCCAATTA+TGG | + | chr3_3:76693313-76693332 | None:intergenic | 50.0% | |
| CCCCAGGTTACTAGAAATCC+TGG | - | chr3_3:76694388-76694407 | Msa0473940:intron | 50.0% | |
| TTGGAGTTGGAGATGGACCA+TGG | - | chr3_3:76694581-76694600 | Msa0473940:intron | 50.0% | |
| TGGAGTTGGAGATGGACCAT+GGG | - | chr3_3:76694582-76694601 | Msa0473940:intron | 50.0% | |
| AAGTGCTTCATCTCGTCCCA+TGG | + | chr3_3:76694601-76694620 | None:intergenic | 50.0% | |
| !! | GAACACGGAAGCATCCAAGA+AGG | - | chr3_3:76695158-76695177 | Msa0473940:intron | 50.0% |
| ! | ATTTGCGCTTGCTGCCCTTA+TGG | - | chr3_3:76695188-76695207 | Msa0473940:CDS | 50.0% |
| !! | ATTTCCTTAGGTGGTGGGAG+AGG | + | chr3_3:76695370-76695389 | None:intergenic | 50.0% |
| GGAGCGACAAGGAAACATAC+TGG | + | chr3_3:76695478-76695497 | None:intergenic | 50.0% | |
| GAAAGATACAGGGAGCGACA+AGG | + | chr3_3:76695489-76695508 | None:intergenic | 50.0% | |
| TGCGTGGTAATTCCACTTGG+CGG | + | chr3_3:76695904-76695923 | None:intergenic | 50.0% | |
| CTCTGCGTGGTAATTCCACT+TGG | + | chr3_3:76695907-76695926 | None:intergenic | 50.0% | |
| CAAGTGGAATTACCACGCAG+AGG | - | chr3_3:76695905-76695924 | Msa0473940:intron | 50.0% | |
| TGTGCATTTGTTCCTCTGCG+TGG | + | chr3_3:76695920-76695939 | None:intergenic | 50.0% | |
| AGAAATCCTGGTACGCCGCA+TGG | - | chr3_3:76694400-76694419 | Msa0473940:intron | 55.0% | |
| ! | TGTGCTGCCCGGTACTGAAA+TGG | + | chr3_3:76695219-76695238 | None:intergenic | 55.0% |
| AAGACCTCTCCCACCACCTA+AGG | - | chr3_3:76695363-76695382 | Msa0473940:intron | 55.0% | |
| !! | CATACTGGTTCTGCACTGGC+TGG | + | chr3_3:76695463-76695482 | None:intergenic | 55.0% |
| GCGTGGTAATTCCACTTGGC+GGG | + | chr3_3:76695903-76695922 | None:intergenic | 55.0% | |
| AGCTTTCCATGCGGCGTACC+AGG | + | chr3_3:76694409-76694428 | None:intergenic | 60.0% | |
| !! | TCTGCACTGGCTGGAGCTGT+TGG | + | chr3_3:76695454-76695473 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 76692450 | 76696294 | 76692450 | ID=Msa0473940;Name=Msa0473940 |
| chr3_3 | mRNA | 76692450 | 76696294 | 76692450 | ID=Msa0473940-mRNA-1;Parent=Msa0473940;Name=Msa0473940-mRNA-1;_AED=0.15;_eAED=0.15;_QI=30|1|1|1|0.90|0.83|12|166|438 |
| chr3_3 | exon | 76692450 | 76692494 | 76692450 | ID=Msa0473940-mRNA-1:exon:20280;Parent=Msa0473940-mRNA-1 |
| chr3_3 | exon | 76692519 | 76692723 | 76692519 | ID=Msa0473940-mRNA-1:exon:20279;Parent=Msa0473940-mRNA-1 |
| chr3_3 | exon | 76693115 | 76693171 | 76693115 | ID=Msa0473940-mRNA-1:exon:20278;Parent=Msa0473940-mRNA-1 |
| chr3_3 | exon | 76693267 | 76693408 | 76693267 | ID=Msa0473940-mRNA-1:exon:20277;Parent=Msa0473940-mRNA-1 |
| chr3_3 | exon | 76693488 | 76693615 | 76693488 | ID=Msa0473940-mRNA-1:exon:20276;Parent=Msa0473940-mRNA-1 |
| chr3_3 | exon | 76694084 | 76694189 | 76694084 | ID=Msa0473940-mRNA-1:exon:20275;Parent=Msa0473940-mRNA-1 |
| chr3_3 | exon | 76694271 | 76694350 | 76694271 | ID=Msa0473940-mRNA-1:exon:20274;Parent=Msa0473940-mRNA-1 |
| chr3_3 | exon | 76694458 | 76694555 | 76694458 | ID=Msa0473940-mRNA-1:exon:20273;Parent=Msa0473940-mRNA-1 |
| chr3_3 | exon | 76695170 | 76695283 | 76695170 | ID=Msa0473940-mRNA-1:exon:20272;Parent=Msa0473940-mRNA-1 |
| chr3_3 | exon | 76695366 | 76695506 | 76695366 | ID=Msa0473940-mRNA-1:exon:20271;Parent=Msa0473940-mRNA-1 |
| chr3_3 | exon | 76695594 | 76695678 | 76695594 | ID=Msa0473940-mRNA-1:exon:20270;Parent=Msa0473940-mRNA-1 |
| chr3_3 | exon | 76695983 | 76696294 | 76695983 | ID=Msa0473940-mRNA-1:exon:20269;Parent=Msa0473940-mRNA-1 |
| chr3_3 | five_prime_UTR | 76696265 | 76696294 | 76696265 | ID=Msa0473940-mRNA-1:five_prime_utr;Parent=Msa0473940-mRNA-1 |
| chr3_3 | CDS | 76695983 | 76696264 | 76695983 | ID=Msa0473940-mRNA-1:cds;Parent=Msa0473940-mRNA-1 |
| chr3_3 | CDS | 76695594 | 76695678 | 76695594 | ID=Msa0473940-mRNA-1:cds;Parent=Msa0473940-mRNA-1 |
| chr3_3 | CDS | 76695366 | 76695506 | 76695366 | ID=Msa0473940-mRNA-1:cds;Parent=Msa0473940-mRNA-1 |
| chr3_3 | CDS | 76695170 | 76695283 | 76695170 | ID=Msa0473940-mRNA-1:cds;Parent=Msa0473940-mRNA-1 |
| chr3_3 | CDS | 76694458 | 76694555 | 76694458 | ID=Msa0473940-mRNA-1:cds;Parent=Msa0473940-mRNA-1 |
| chr3_3 | CDS | 76694271 | 76694350 | 76694271 | ID=Msa0473940-mRNA-1:cds;Parent=Msa0473940-mRNA-1 |
| chr3_3 | CDS | 76694084 | 76694189 | 76694084 | ID=Msa0473940-mRNA-1:cds;Parent=Msa0473940-mRNA-1 |
| chr3_3 | CDS | 76693488 | 76693615 | 76693488 | ID=Msa0473940-mRNA-1:cds;Parent=Msa0473940-mRNA-1 |
| chr3_3 | CDS | 76693267 | 76693408 | 76693267 | ID=Msa0473940-mRNA-1:cds;Parent=Msa0473940-mRNA-1 |
| chr3_3 | CDS | 76693115 | 76693171 | 76693115 | ID=Msa0473940-mRNA-1:cds;Parent=Msa0473940-mRNA-1 |
| chr3_3 | CDS | 76692640 | 76692723 | 76692640 | ID=Msa0473940-mRNA-1:cds;Parent=Msa0473940-mRNA-1 |
| chr3_3 | three_prime_UTR | 76692519 | 76692639 | 76692519 | ID=Msa0473940-mRNA-1:three_prime_utr;Parent=Msa0473940-mRNA-1 |
| chr3_3 | three_prime_UTR | 76692450 | 76692494 | 76692450 | ID=Msa0473940-mRNA-1:three_prime_utr;Parent=Msa0473940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
