Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0521490 | XP_003603599.1 | 82.548 | 361 | 21 | 3 | 1 | 358 | 1 | 322 | 0.0 | 595 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0521490 | sp|Q08298|RD22_ARATH | 51.421 | 387 | 153 | 7 | 4 | 355 | 3 | 389 | 9.21e-125 | 367 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0521490 | G7J3E3 | 82.548 | 361 | 21 | 3 | 1 | 358 | 1 | 322 | 0.0 | 595 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015950 | Msa0521490 | 0.826316 | 2.899765e-54 | -8.615850e-47 |
| Msa0015960 | Msa0521490 | 0.829755 | 4.309354e-55 | -8.615850e-47 |
| Msa0016070 | Msa0521490 | 0.823119 | 1.644318e-53 | -8.615850e-47 |
| Msa0016080 | Msa0521490 | 0.831590 | 1.531377e-55 | -8.615850e-47 |
| Msa0028690 | Msa0521490 | 0.811996 | 5.292917e-51 | -8.615850e-47 |
| Msa0060410 | Msa0521490 | 0.831242 | 1.865483e-55 | -8.615850e-47 |
| Msa0210610 | Msa0521490 | 0.808511 | 2.988000e-50 | -8.615850e-47 |
| Msa0433650 | Msa0521490 | 0.993687 | 1.715563e-201 | -8.615850e-47 |
| Msa0477500 | Msa0521490 | 0.852463 | 4.541584e-61 | -8.615850e-47 |
| Msa0307740 | Msa0521490 | 0.804349 | 2.253974e-49 | -8.615850e-47 |
| Msa0313900 | Msa0521490 | 0.813736 | 2.200887e-51 | -8.615850e-47 |
| Msa0521490 | Msa0521550 | 0.990213 | 1.400582e-181 | -8.615850e-47 |
| Msa0521490 | Msa0661410 | 0.831391 | 1.714683e-55 | -8.615850e-47 |
| Msa0521490 | Msa0661420 | 0.836506 | 8.994486e-57 | -8.615850e-47 |
| Msa0521490 | Msa0702790 | 0.801666 | 8.085790e-49 | -8.615850e-47 |
| Msa0521490 | Msa0723090 | 0.800428 | 1.448043e-48 | -8.615850e-47 |
| Msa0521490 | Msa0828950 | 0.800993 | 1.110188e-48 | -8.615850e-47 |
| Msa0521490 | Msa0907880 | 0.802111 | 6.551852e-49 | -8.615850e-47 |
| Msa0521490 | Msa1044250 | 0.804241 | 2.374764e-49 | -8.615850e-47 |
| Msa0521490 | Msa1154320 | 0.808850 | 2.529427e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0521490 | MtrunA17_Chr3g0139431 | 82.548 | 361 | 21 | 3 | 1 | 358 | 1 | 322 | 0.0 | 595 |
| Msa0521490 | MtrunA17_Chr1g0147271 | 60.574 | 383 | 124 | 3 | 1 | 356 | 1 | 383 | 1.40e-167 | 473 |
| Msa0521490 | MtrunA17_Chr1g0146631 | 56.667 | 360 | 115 | 7 | 1 | 356 | 1 | 323 | 4.16e-140 | 400 |
| Msa0521490 | MtrunA17_Chr1g0147331 | 56.944 | 360 | 114 | 6 | 1 | 356 | 1 | 323 | 2.84e-135 | 388 |
| Msa0521490 | MtrunA17_Chr1g0147311 | 48.895 | 362 | 145 | 7 | 1 | 356 | 27 | 354 | 4.52e-116 | 340 |
| Msa0521490 | MtrunA17_Chr1g0147261 | 49.157 | 356 | 121 | 8 | 1 | 355 | 1 | 297 | 8.97e-110 | 322 |
| Msa0521490 | MtrunA17_Chr1g0147241 | 49.020 | 357 | 133 | 9 | 1 | 355 | 1 | 310 | 2.76e-109 | 322 |
| Msa0521490 | MtrunA17_Chr1g0147291 | 55.000 | 280 | 108 | 4 | 79 | 356 | 2 | 265 | 2.98e-104 | 307 |
| Msa0521490 | MtrunA17_Chr1g0147301 | 53.788 | 264 | 114 | 3 | 99 | 356 | 22 | 283 | 1.23e-100 | 298 |
| Msa0521490 | MtrunA17_Chr1g0147321 | 59.556 | 225 | 90 | 1 | 131 | 355 | 12 | 235 | 8.38e-99 | 293 |
| Msa0521490 | MtrunA17_Chr1g0147251 | 48.606 | 251 | 118 | 4 | 105 | 355 | 1 | 240 | 1.71e-82 | 251 |
| Msa0521490 | MtrunA17_Chr4g0034821 | 45.536 | 224 | 115 | 5 | 140 | 357 | 69 | 291 | 4.13e-60 | 195 |
| Msa0521490 | MtrunA17_Chr3g0144451 | 43.304 | 224 | 120 | 5 | 140 | 357 | 53 | 275 | 5.07e-57 | 187 |
| Msa0521490 | MtrunA17_Chr3g0138231 | 43.304 | 224 | 120 | 4 | 140 | 357 | 44 | 266 | 2.20e-56 | 185 |
| Msa0521490 | MtrunA17_Chr3g0144421 | 41.964 | 224 | 122 | 5 | 140 | 357 | 81 | 302 | 1.17e-53 | 179 |
| Msa0521490 | MtrunA17_Chr4g0034731 | 39.908 | 218 | 123 | 6 | 146 | 357 | 217 | 432 | 2.89e-43 | 155 |
| Msa0521490 | MtrunA17_Chr4g0034451 | 40.000 | 240 | 127 | 10 | 128 | 357 | 294 | 526 | 4.15e-42 | 154 |
| Msa0521490 | MtrunA17_Chr8g0355861 | 39.640 | 222 | 95 | 8 | 147 | 358 | 69 | 261 | 4.46e-41 | 145 |
| Msa0521490 | MtrunA17_Chr3g0144391 | 39.631 | 217 | 123 | 6 | 146 | 357 | 292 | 505 | 1.31e-40 | 149 |
| Msa0521490 | MtrunA17_Chr3g0144411 | 37.788 | 217 | 127 | 5 | 146 | 357 | 325 | 538 | 3.53e-40 | 149 |
| Msa0521490 | MtrunA17_Chr4g0034721 | 40.183 | 219 | 121 | 7 | 146 | 357 | 361 | 576 | 5.10e-40 | 149 |
| Msa0521490 | MtrunA17_Chr4g0034691 | 37.156 | 218 | 129 | 6 | 146 | 357 | 493 | 708 | 2.82e-37 | 142 |
| Msa0521490 | MtrunA17_Chr8g0355311 | 45.578 | 147 | 71 | 3 | 213 | 358 | 53 | 191 | 1.36e-35 | 128 |
| Msa0521490 | MtrunA17_Chr2g0318901 | 33.480 | 227 | 118 | 5 | 136 | 358 | 63 | 260 | 3.94e-35 | 129 |
| Msa0521490 | MtrunA17_Chr8g0355831 | 30.663 | 362 | 207 | 12 | 16 | 358 | 16 | 352 | 4.66e-35 | 131 |
| Msa0521490 | MtrunA17_Chr8g0355871 | 34.821 | 224 | 118 | 7 | 138 | 357 | 23 | 222 | 2.33e-34 | 126 |
| Msa0521490 | MtrunA17_Chr8g0355331 | 44.444 | 153 | 76 | 3 | 207 | 358 | 278 | 422 | 3.46e-34 | 130 |
| Msa0521490 | MtrunA17_Chr8g0355321 | 34.263 | 251 | 119 | 8 | 147 | 358 | 60 | 303 | 6.78e-34 | 127 |
| Msa0521490 | MtrunA17_Chr8g0355841 | 43.750 | 160 | 80 | 5 | 199 | 358 | 361 | 510 | 1.08e-33 | 130 |
| Msa0521490 | MtrunA17_Chr2g0318871 | 33.186 | 226 | 122 | 6 | 135 | 358 | 62 | 260 | 1.56e-33 | 125 |
| Msa0521490 | MtrunA17_Chr6g0485051 | 36.598 | 194 | 115 | 6 | 171 | 357 | 13 | 205 | 3.44e-33 | 122 |
| Msa0521490 | MtrunA17_Chr8g0365361 | 35.160 | 219 | 126 | 5 | 146 | 355 | 181 | 392 | 4.11e-32 | 124 |
| Msa0521490 | MtrunA17_Chr2g0318931 | 34.404 | 218 | 113 | 8 | 146 | 358 | 79 | 271 | 9.17e-32 | 120 |
| Msa0521490 | MtrunA17_Chr3g0117791 | 36.530 | 219 | 125 | 6 | 146 | 356 | 413 | 625 | 9.66e-32 | 125 |
| Msa0521490 | MtrunA17_Chr8g0365401 | 35.484 | 217 | 130 | 5 | 146 | 356 | 412 | 624 | 3.45e-31 | 124 |
| Msa0521490 | MtrunA17_Chr5g0413591 | 32.870 | 216 | 137 | 5 | 146 | 356 | 415 | 627 | 3.81e-31 | 124 |
| Msa0521490 | MtrunA17_Chr8g0365381 | 35.981 | 214 | 131 | 4 | 146 | 355 | 429 | 640 | 2.30e-30 | 122 |
| Msa0521490 | MtrunA17_Chr1g0168781 | 33.028 | 218 | 115 | 6 | 146 | 358 | 69 | 260 | 7.69e-29 | 112 |
| Msa0521490 | MtrunA17_Chr4g0076231 | 35.065 | 154 | 96 | 2 | 205 | 355 | 4 | 156 | 4.00e-24 | 97.1 |
| Msa0521490 | MtrunA17_Chr5g0412981 | 28.899 | 218 | 151 | 4 | 144 | 358 | 195 | 411 | 9.04e-24 | 101 |
| Msa0521490 | MtrunA17_Chr5g0412981 | 26.786 | 168 | 121 | 2 | 173 | 339 | 18 | 184 | 2.44e-13 | 70.9 |
| Msa0521490 | MtrunA17_Chr5g0412991 | 28.899 | 218 | 151 | 4 | 144 | 358 | 195 | 411 | 9.22e-24 | 101 |
| Msa0521490 | MtrunA17_Chr5g0412991 | 26.786 | 168 | 121 | 2 | 173 | 339 | 18 | 184 | 1.05e-13 | 71.6 |
| Msa0521490 | MtrunA17_Chr1g0147231 | 59.259 | 81 | 31 | 2 | 132 | 210 | 50 | 130 | 2.37e-23 | 94.7 |
| Msa0521490 | MtrunA17_Chr5g0412951 | 27.053 | 207 | 147 | 4 | 152 | 355 | 2 | 207 | 1.35e-19 | 86.3 |
| Msa0521490 | MtrunA17_Chr4g0034051 | 46.753 | 77 | 38 | 3 | 284 | 357 | 3 | 79 | 1.37e-18 | 79.7 |
| Msa0521490 | MtrunA17_Chr8g0371951 | 44.000 | 75 | 38 | 2 | 275 | 346 | 14 | 87 | 8.37e-17 | 74.7 |
| Msa0521490 | MtrunA17_Chr5g0413021 | 34.118 | 85 | 55 | 1 | 275 | 358 | 46 | 130 | 7.10e-14 | 68.2 |
| Msa0521490 | MtrunA17_Chr1g0147281 | 59.184 | 49 | 19 | 1 | 1 | 48 | 1 | 49 | 9.18e-13 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0521490 | AT5G25610.1 | 51.421 | 387 | 153 | 7 | 4 | 355 | 3 | 389 | 9.36e-126 | 367 |
| Msa0521490 | AT1G49320.1 | 37.991 | 229 | 130 | 6 | 139 | 356 | 51 | 278 | 5.41e-45 | 156 |
| Msa0521490 | AT1G60390.1 | 34.419 | 215 | 133 | 5 | 146 | 355 | 409 | 620 | 2.83e-32 | 127 |
| Msa0521490 | AT1G70370.2 | 35.321 | 218 | 129 | 7 | 146 | 356 | 411 | 623 | 3.08e-31 | 124 |
| Msa0521490 | AT1G70370.1 | 35.321 | 218 | 129 | 7 | 146 | 356 | 411 | 623 | 3.08e-31 | 124 |
| Msa0521490 | AT1G23760.1 | 32.719 | 217 | 136 | 5 | 146 | 356 | 407 | 619 | 5.21e-29 | 118 |
Find 99 sgRNAs with CRISPR-Local
Find 354 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATATACTGTACTAATTAATT+TGG | 0.163552 | 3_4:-74351305 | None:intergenic |
| TAGAGCAGCATTATTCTTCT+TGG | 0.210808 | 3_4:+74350659 | Msa0521490:CDS |
| TTCCTGAGGATCACATTGTT+TGG | 0.260914 | 3_4:+74351279 | Msa0521490:CDS |
| CAGGTTTCCCCTTTCTCTTA+TGG | 0.264071 | 3_4:-74350560 | None:intergenic |
| CTCTACCTCCTGAACTTTAC+TGG | 0.286328 | 3_4:+74350118 | Msa0521490:CDS |
| TGTATTTGCAACCAAGCTTT+AGG | 0.292605 | 3_4:+74347134 | Msa0521490:five_prime_UTR |
| AGGATATCAGTTATGGCTTT+TGG | 0.293944 | 3_4:-74350168 | None:intergenic |
| AACATTCACTGAGTTTCCTT+TGG | 0.295871 | 3_4:-74350457 | None:intergenic |
| ACTTGAAAAGCAAGGTGTTT+GGG | 0.310906 | 3_4:-74351215 | None:intergenic |
| GTTCCTTTGGAGGCTGATAA+TGG | 0.312970 | 3_4:+74351140 | Msa0521490:CDS |
| TTATTCAAGGACGGGGTAAA+AGG | 0.318604 | 3_4:-74351343 | None:intergenic |
| TGGCAGACCGAAAGTGTTCC+TGG | 0.327249 | 3_4:-74351251 | None:intergenic |
| TCCTGAGGATCACATTGTTT+GGG | 0.351762 | 3_4:+74351280 | Msa0521490:CDS |
| ACATTCACTGAGTTTCCTTT+GGG | 0.355872 | 3_4:-74350456 | None:intergenic |
| AAGAGCTTATTCTGTTCCTT+TGG | 0.359250 | 3_4:+74351127 | Msa0521490:CDS |
| GACTTGAAAAGCAAGGTGTT+TGG | 0.359862 | 3_4:-74351216 | None:intergenic |
| AGCTTATTCTGTTCCTTTGG+AGG | 0.380981 | 3_4:+74351130 | Msa0521490:CDS |
| GCCACACAGATACTTCAAAA+TGG | 0.382981 | 3_4:+74351189 | Msa0521490:CDS |
| ATTTAATTTGCAGCTTGTAT+TGG | 0.383994 | 3_4:+74350080 | Msa0521490:intron |
| TGACAATAAAATATAGCATA+AGG | 0.384244 | 3_4:-74351089 | None:intergenic |
| TTCCTTTGGAGGCTGATAAT+GGG | 0.385699 | 3_4:+74351141 | Msa0521490:CDS |
| CACATTGAGTATCGTTAAAA+CGG | 0.391410 | 3_4:-74347199 | None:intergenic |
| TAGAAGAAGGTAGTTCATAC+TGG | 0.406703 | 3_4:-74347175 | None:intergenic |
| GGACCAACTACAACAGTTGC+AGG | 0.416463 | 3_4:-74350579 | None:intergenic |
| ATATGAGCCTCCTCTGACTC+AGG | 0.426109 | 3_4:-74350828 | None:intergenic |
| AATTAAGCCAGGAACACTTT+CGG | 0.439258 | 3_4:+74351244 | Msa0521490:CDS |
| TGTGAAGATGCAAGCATTCA+AGG | 0.445435 | 3_4:+74350873 | Msa0521490:CDS |
| ATCGACTTCCAGTAAAGTTC+AGG | 0.453981 | 3_4:-74350126 | None:intergenic |
| CTCCTCTGACTCAGGTTTGA+CGG | 0.454121 | 3_4:-74350820 | None:intergenic |
| GAAGCTAACTGCAAGGGATA+AGG | 0.466640 | 3_4:+74351040 | Msa0521490:CDS |
| GACAATAAAATATAGCATAA+GGG | 0.473806 | 3_4:-74351088 | None:intergenic |
| AAAGCAGTGCAAATTATTCA+AGG | 0.475657 | 3_4:-74351356 | None:intergenic |
| AAGAAGAATAATGCTGCTCT+AGG | 0.481299 | 3_4:-74350657 | None:intergenic |
| CAAGTCCTCAAAATTAAGCC+AGG | 0.485589 | 3_4:+74351233 | Msa0521490:CDS |
| ACCCAAACAATGTGATCCTC+AGG | 0.494013 | 3_4:-74351281 | None:intergenic |
| AAGTGTTAAGGTTGTGTCTA+CGG | 0.496910 | 3_4:+74350962 | Msa0521490:CDS |
| GCAGCATAGTTGTAAGCAAA+AGG | 0.498866 | 3_4:-74350609 | None:intergenic |
| ACATTGAGTATCGTTAAAAC+GGG | 0.510823 | 3_4:-74347198 | None:intergenic |
| TGCATCTTCACACTCCTCAA+TGG | 0.513090 | 3_4:-74350862 | None:intergenic |
| AATGCAGGCCATAAGAGAAA+GGG | 0.513139 | 3_4:+74350552 | Msa0521490:CDS |
| AGTGCAAATTATTCAAGGAC+GGG | 0.517929 | 3_4:-74351351 | None:intergenic |
| TAAAGCTGGAACCTAAAGCT+TGG | 0.524479 | 3_4:-74347145 | None:intergenic |
| AACTCAGTGAATGTTGGAAA+AGG | 0.526849 | 3_4:+74350465 | Msa0521490:CDS |
| ATACTGGGAAGCTTTAAAGC+TGG | 0.527196 | 3_4:-74347159 | None:intergenic |
| AATGTCAACGTTGGTGGTGG+AGG | 0.529553 | 3_4:+74350519 | Msa0521490:CDS |
| AAAGCACAAATGTGGGTGTA+GGG | 0.529632 | 3_4:+74350397 | Msa0521490:CDS |
| AAATGCAGGCCATAAGAGAA+AGG | 0.530603 | 3_4:+74350551 | Msa0521490:CDS |
| AAAAGCACAAATGTGGGTGT+AGG | 0.540367 | 3_4:+74350396 | Msa0521490:CDS |
| TAATTACTATGCAGATTGGA+TGG | 0.542568 | 3_4:+74350368 | Msa0521490:intron |
| ACATACAACATAACACATCA+TGG | 0.545590 | 3_4:-74351436 | None:intergenic |
| CATTAGCACCTCTTCCTGCA+TGG | 0.546194 | 3_4:-74350500 | None:intergenic |
| GTGGTAGACAACAAGAGTGC+AGG | 0.547753 | 3_4:+74350984 | Msa0521490:CDS |
| GTAAATGTCCATGCAGGAAG+AGG | 0.558239 | 3_4:+74350492 | Msa0521490:CDS |
| AAAGGAAACTCAGTGAATGT+TGG | 0.559650 | 3_4:+74350459 | Msa0521490:CDS |
| AAACCTGCAACTGTTGTAGT+TGG | 0.560528 | 3_4:+74350576 | Msa0521490:CDS |
| TCGTTAAAACGGGTAGAAGA+AGG | 0.561572 | 3_4:-74347188 | None:intergenic |
| GGAGGAGTTTCTGTAAATGC+AGG | 0.562166 | 3_4:+74350537 | Msa0521490:CDS |
| CTTGAAAAGCAAGGTGTTTG+GGG | 0.564512 | 3_4:-74351214 | None:intergenic |
| GGAAGACAAAAGCACAAATG+TGG | 0.569047 | 3_4:+74350389 | Msa0521490:CDS |
| AGAAGAAGGTAGTTCATACT+GGG | 0.569084 | 3_4:-74347174 | None:intergenic |
| CAGTGCAAATTATTCAAGGA+CGG | 0.569864 | 3_4:-74351352 | None:intergenic |
| TGCAACCTCACTAGAATCCA+TGG | 0.570382 | 3_4:+74350911 | Msa0521490:CDS |
| GCTAATGTCAACGTTGGTGG+TGG | 0.571475 | 3_4:+74350516 | Msa0521490:CDS |
| GGTCTGCCACTTTCTTCCTG+AGG | 0.571878 | 3_4:+74351265 | Msa0521490:CDS |
| ACAAATGTGGGTGTAGGGAA+AGG | 0.577909 | 3_4:+74350402 | Msa0521490:CDS |
| TTGTAAGCAAAAGGCGAGTG+TGG | 0.579919 | 3_4:-74350600 | None:intergenic |
| TCAGTGAATGTTGGAAAAGG+AGG | 0.581112 | 3_4:+74350468 | Msa0521490:CDS |
| TTCCGTCAAACCTGAGTCAG+AGG | 0.585688 | 3_4:+74350818 | Msa0521490:CDS |
| AGAAGAATAATGCTGCTCTA+GGG | 0.587688 | 3_4:-74350656 | None:intergenic |
| GACTAGAGTTAAAGCTGTAG+TGG | 0.589350 | 3_4:+74351163 | Msa0521490:CDS |
| GATTAATGAAGCTAACTGCA+AGG | 0.590558 | 3_4:+74351033 | Msa0521490:CDS |
| GGAGGTGTAAATGTCCATGC+AGG | 0.591971 | 3_4:+74350486 | Msa0521490:CDS |
| AGGGTGGAGGATATCAGTTA+TGG | 0.593886 | 3_4:-74350175 | None:intergenic |
| TGTGATCCTCAGGAAGAAAG+TGG | 0.602472 | 3_4:-74351271 | None:intergenic |
| CAAAATGCTAAAATCAACCA+TGG | 0.604927 | 3_4:-74350928 | None:intergenic |
| ATTAATGAAGCTAACTGCAA+GGG | 0.605328 | 3_4:+74351034 | Msa0521490:CDS |
| GTGTAATATTATATATAGTG+TGG | 0.606788 | 3_4:+74351482 | Msa0521490:three_prime_UTR |
| ACATGTACTAACCAGGGTGG+AGG | 0.617776 | 3_4:-74350188 | None:intergenic |
| TATCATGAAGAATACCATTG+AGG | 0.618871 | 3_4:+74350848 | Msa0521490:CDS |
| GGTGCTAATGTCAACGTTGG+TGG | 0.619780 | 3_4:+74350513 | Msa0521490:CDS |
| ATGCAGGCCATAAGAGAAAG+GGG | 0.624816 | 3_4:+74350553 | Msa0521490:CDS |
| GAAGACAAAAGCACAAATGT+GGG | 0.625768 | 3_4:+74350390 | Msa0521490:CDS |
| GTCCCATTATCAGCCTCCAA+AGG | 0.629122 | 3_4:-74351143 | None:intergenic |
| AGATGCAAGCATTCAAGGCG+AGG | 0.630805 | 3_4:+74350878 | Msa0521490:CDS |
| AATGTGGGTGTAGGGAAAGG+TGG | 0.637127 | 3_4:+74350405 | Msa0521490:CDS |
| GACTTCCAGTAAAGTTCAGG+AGG | 0.638849 | 3_4:-74350123 | None:intergenic |
| GTGCAAATTATTCAAGGACG+GGG | 0.639089 | 3_4:-74351350 | None:intergenic |
| ATCAACCATGGATTCTAGTG+AGG | 0.640745 | 3_4:-74350916 | None:intergenic |
| TGGTAGACAACAAGAGTGCA+GGG | 0.641519 | 3_4:+74350985 | Msa0521490:CDS |
| GTTGCAGACGCAACTTGTCG+AGG | 0.650442 | 3_4:-74350753 | None:intergenic |
| CGTCAAACCTGAGTCAGAGG+AGG | 0.660523 | 3_4:+74350821 | Msa0521490:CDS |
| AGAGGTGCTAATGTCAACGT+TGG | 0.663899 | 3_4:+74350510 | Msa0521490:CDS |
| AACTTGTCGAGGCAAGAATG+CGG | 0.672229 | 3_4:-74350742 | None:intergenic |
| ATCATGTAATTGAGTCTCAG+TGG | 0.679850 | 3_4:-74350631 | None:intergenic |
| ACTGACAAAGGAAAACCCAA+AGG | 0.694076 | 3_4:+74350441 | Msa0521490:CDS |
| TGTTAAGGTTGTGTCTACGG+TGG | 0.716693 | 3_4:+74350965 | Msa0521490:CDS |
| ATTACATGTACTAACCAGGG+TGG | 0.721016 | 3_4:-74350191 | None:intergenic |
| ATAACTGATATCCTCCACCC+TGG | 0.725267 | 3_4:+74350177 | Msa0521490:CDS |
| GTAAGTGTTGATACTGACAA+AGG | 0.736311 | 3_4:+74350429 | Msa0521490:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATCTTTTTTTTTTTTTTGA+AGG | + | chr3_4:74347390-74347409 | Msa0521490:intron | 10.0% |
| !!! | TCAATTCAATATTTTTTTTT+TGG | + | chr3_4:74347437-74347456 | Msa0521490:intron | 10.0% |
| !!! | CGTTTTAAAAAAAAAATAAT+AGG | - | chr3_4:74349009-74349028 | None:intergenic | 10.0% |
| !!! | ATTTTTTTTTTAAAACGTTT+TGG | + | chr3_4:74349012-74349031 | Msa0521490:intron | 10.0% |
| !! | ATAAATAAGATTAAAATCTA+AGG | + | chr3_4:74349238-74349257 | Msa0521490:intron | 10.0% |
| !! | TAAATAAGATTAAAATCTAA+GGG | + | chr3_4:74349239-74349258 | Msa0521490:intron | 10.0% |
| !!! | TATTAGTTTATAATATATAG+GGG | + | chr3_4:74349463-74349482 | Msa0521490:intron | 10.0% |
| !!! | TATTATTTTTTTTGAAAGTA+TGG | + | chr3_4:74349497-74349516 | Msa0521490:intron | 10.0% |
| !!! | CTCATTATAAATATTATTTT+AGG | - | chr3_4:74349546-74349565 | None:intergenic | 10.0% |
| !!! | ATTCTTAGTTGATAATATTA+TGG | + | chr3_4:74347478-74347497 | Msa0521490:intron | 15.0% |
| !! | TTATCGTTAAAACATAAAAT+TGG | + | chr3_4:74347968-74347987 | Msa0521490:intron | 15.0% |
| !! | TATCGTTAAAACATAAAATT+GGG | + | chr3_4:74347969-74347988 | Msa0521490:intron | 15.0% |
| !! | TATGTTTGAAAACTAATAAA+TGG | + | chr3_4:74347993-74348012 | Msa0521490:intron | 15.0% |
| !!! | TGCTTTTAATGATATTTTTT+TGG | + | chr3_4:74348767-74348786 | Msa0521490:intron | 15.0% |
| !! | GGAAATATATGATAAAATAA+TGG | + | chr3_4:74348965-74348984 | Msa0521490:intron | 15.0% |
| !!! | TTTATTAGACATTATTTTGT+TGG | + | chr3_4:74349345-74349364 | Msa0521490:intron | 15.0% |
| !!! | ATTAGTTTATAATATATAGG+GGG | + | chr3_4:74349464-74349483 | Msa0521490:intron | 15.0% |
| !!! | TGATATATTTTGTAATGTTA+TGG | + | chr3_4:74349603-74349622 | Msa0521490:intron | 15.0% |
| !!! | GATATATTTTGTAATGTTAT+GGG | + | chr3_4:74349604-74349623 | Msa0521490:intron | 15.0% |
| !! | AATTTAAAAGAATCATTGTT+CGG | - | chr3_4:74349868-74349887 | None:intergenic | 15.0% |
| !!! | GATTCTTTTAAATTTTATCT+CGG | + | chr3_4:74349874-74349893 | Msa0521490:intron | 15.0% |
| !!! | TATAATTAACTTTTGTTTAC+TGG | + | chr3_4:74349926-74349945 | Msa0521490:intron | 15.0% |
| !!! | TTTGTAATTTAAGTTAAACA+TGG | - | chr3_4:74349954-74349973 | None:intergenic | 15.0% |
| !! | TAACAAAAGATTATCTTAAT+TGG | - | chr3_4:74350300-74350319 | None:intergenic | 15.0% |
| !!! | AAAAATATGAGTTAACTTTT+CGG | - | chr3_4:74350790-74350809 | None:intergenic | 15.0% |
| !! | ATATACTGTACTAATTAATT+TGG | - | chr3_4:74351308-74351327 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTGAAGGAAG+TGG | + | chr3_4:74347396-74347415 | Msa0521490:intron | 20.0% |
| !!! | TTTTTTTTTTTGAAGGAAGT+GGG | + | chr3_4:74347397-74347416 | Msa0521490:intron | 20.0% |
| !! | TATTATGGTGTATGTTTAAA+AGG | + | chr3_4:74347493-74347512 | Msa0521490:intron | 20.0% |
| !! | GTTATGATTTAAATCAATTG+TGG | + | chr3_4:74347521-74347540 | Msa0521490:intron | 20.0% |
| !!! | TAGTTGTTTTGTTTATGTTT+TGG | + | chr3_4:74347632-74347651 | Msa0521490:intron | 20.0% |
| !!! | TACTAAAAATTGATTCATTG+CGG | - | chr3_4:74347823-74347842 | None:intergenic | 20.0% |
| !! | GAACTTTCATTGATATTTAA+AGG | - | chr3_4:74347934-74347953 | None:intergenic | 20.0% |
| !! | AAATATAACCTTTCTACATT+CGG | + | chr3_4:74348459-74348478 | Msa0521490:intron | 20.0% |
| !! | AAAAGCAAAATACAAACATA+AGG | - | chr3_4:74348754-74348773 | None:intergenic | 20.0% |
| !!! | CTAGTTTTAAGTAATATTTG+AGG | + | chr3_4:74348944-74348963 | Msa0521490:intron | 20.0% |
| !!! | CAAAAAATCGACTTTTAAAA+AGG | - | chr3_4:74349042-74349061 | None:intergenic | 20.0% |
| !!! | TTATTGGCTAACATTAATTT+CGG | - | chr3_4:74349154-74349173 | None:intergenic | 20.0% |
| !! | ATGTTATCACAAGATTTATA+TGG | - | chr3_4:74349389-74349408 | None:intergenic | 20.0% |
| !! | ACGGAAATAAAAATGAAATT+AGG | + | chr3_4:74349433-74349452 | Msa0521490:intron | 20.0% |
| !! | TTTATTAACTTAGCTCAAAA+TGG | - | chr3_4:74349781-74349800 | None:intergenic | 20.0% |
| !! | ATTATAATTACTATGCAGAT+TGG | + | chr3_4:74350364-74350383 | Msa0521490:intron | 20.0% |
| !! | AAAAAATACACACTAAAATC+AGG | + | chr3_4:74351011-74351030 | Msa0521490:CDS | 20.0% |
| !! | GACAATAAAATATAGCATAA+GGG | - | chr3_4:74351091-74351110 | None:intergenic | 20.0% |
| !! | TGACAATAAAATATAGCATA+AGG | - | chr3_4:74351092-74351111 | None:intergenic | 20.0% |
| !!! | ATTAGTACAGTATATTTTAG+TGG | + | chr3_4:74351313-74351332 | Msa0521490:exon | 20.0% |
| !! | GTGTAATATTATATATAGTG+TGG | + | chr3_4:74351482-74351501 | Msa0521490:three_prime_UTR | 20.0% |
| !!! | AAATATTTCTCTTCAAGTTG+TGG | + | chr3_4:74347258-74347277 | Msa0521490:intron | 25.0% |
| !! | GTTTCTCCTTTATTTGTATT+AGG | + | chr3_4:74347318-74347337 | Msa0521490:intron | 25.0% |
| ! | CGATTTCCTAATACAAATAA+AGG | - | chr3_4:74347327-74347346 | None:intergenic | 25.0% |
| !!! | GTTTTGTTTATGTTTTGGTT+AGG | + | chr3_4:74347637-74347656 | Msa0521490:intron | 25.0% |
| !! | ACTAAAAATTGATTCATTGC+GGG | - | chr3_4:74347822-74347841 | None:intergenic | 25.0% |
| !!! | AGAGTTTTTTTAAGCTTCAA+TGG | + | chr3_4:74347848-74347867 | Msa0521490:intron | 25.0% |
| ! | TTATTATGCATTGCAATAGT+GGG | - | chr3_4:74348039-74348058 | None:intergenic | 25.0% |
| ! | TAGAAAAGAAGAAATGAGTA+CGG | - | chr3_4:74348126-74348145 | None:intergenic | 25.0% |
| !!! | TTTTGAAAAAACCGATAAAC+CGG | - | chr3_4:74348303-74348322 | None:intergenic | 25.0% |
| !!! | TATCGGTTTTTTCAAAAAAC+CGG | + | chr3_4:74348306-74348325 | Msa0521490:intron | 25.0% |
| !!! | TTTTGCATAGTTTTAAAACC+CGG | - | chr3_4:74348441-74348460 | None:intergenic | 25.0% |
| ! | AATATAACCTTTCTACATTC+GGG | + | chr3_4:74348460-74348479 | Msa0521490:intron | 25.0% |
| !! | TTTTCCCGATTTCAAAATAT+GGG | - | chr3_4:74348542-74348561 | None:intergenic | 25.0% |
| !! | TTTTTCCCGATTTCAAAATA+TGG | - | chr3_4:74348543-74348562 | None:intergenic | 25.0% |
| ! | TGATGTAGTCTATTCATTAA+TGG | + | chr3_4:74349083-74349102 | Msa0521490:intron | 25.0% |
| !! | TATTGGCTAACATTAATTTC+GGG | - | chr3_4:74349153-74349172 | None:intergenic | 25.0% |
| ! | AAAATGCTAGATATCAAGAA+TGG | - | chr3_4:74349306-74349325 | None:intergenic | 25.0% |
| !! | ATATCTAGCATTTTCCTTAA+TGG | + | chr3_4:74349312-74349331 | Msa0521490:intron | 25.0% |
| ! | TAAATATTGTCACACCATTA+AGG | - | chr3_4:74349329-74349348 | None:intergenic | 25.0% |
| ! | AGTTAAAATGACTCCAAAAT+GGG | + | chr3_4:74349410-74349429 | Msa0521490:intron | 25.0% |
| !! | TTTCTTGAATTTGAAGTACA+CGG | - | chr3_4:74349663-74349682 | None:intergenic | 25.0% |
| ! | TGGATTGAATATAGTATGTA+GGG | - | chr3_4:74350018-74350037 | None:intergenic | 25.0% |
| ! | TTGGATTGAATATAGTATGT+AGG | - | chr3_4:74350019-74350038 | None:intergenic | 25.0% |
| ! | TATCAATTATCGTAAGCAAT+TGG | - | chr3_4:74350038-74350057 | None:intergenic | 25.0% |
| !!! | ATTTAATTTGCAGCTTGTAT+TGG | + | chr3_4:74350080-74350099 | Msa0521490:intron | 25.0% |
| !!! | TTTAAGTTCATTTTTGTTCC+AGG | - | chr3_4:74350699-74350718 | None:intergenic | 25.0% |
| ! | ACATTGAGTATCGTTAAAAC+GGG | - | chr3_4:74347201-74347220 | None:intergenic | 30.0% |
| ! | CACATTGAGTATCGTTAAAA+CGG | - | chr3_4:74347202-74347221 | None:intergenic | 30.0% |
| ATCGTTATTCTTGTTACTGT+AGG | + | chr3_4:74347343-74347362 | Msa0521490:intron | 30.0% | |
| !!! | TTAGACCATTTTGATTGTCT+GGG | + | chr3_4:74347544-74347563 | Msa0521490:intron | 30.0% |
| TTAAAATGAGCGCAAATTGT+TGG | - | chr3_4:74347893-74347912 | None:intergenic | 30.0% | |
| GTTATTATGCATTGCAATAG+TGG | - | chr3_4:74348040-74348059 | None:intergenic | 30.0% | |
| !!! | GTTTCAGTTTTAGAGATATG+TGG | - | chr3_4:74348084-74348103 | None:intergenic | 30.0% |
| ATTTAAGAAATTGCTTGACC+CGG | + | chr3_4:74348260-74348279 | Msa0521490:intron | 30.0% | |
| TGTAGTCTATTCATTAATGG+TGG | + | chr3_4:74349086-74349105 | Msa0521490:intron | 30.0% | |
| TGATGAATTCAAGAATGACA+TGG | - | chr3_4:74349276-74349295 | None:intergenic | 30.0% | |
| !! | TAGACATTATTTTGTTGGCT+TGG | + | chr3_4:74349350-74349369 | Msa0521490:intron | 30.0% |
| CAGTTAAAATGACTCCAAAA+TGG | + | chr3_4:74349409-74349428 | Msa0521490:intron | 30.0% | |
| !! | TTTTTATTTCCGTCCCATTT+TGG | - | chr3_4:74349426-74349445 | None:intergenic | 30.0% |
| ! | TTCTTGAATTTGAAGTACAC+GGG | - | chr3_4:74349662-74349681 | None:intergenic | 30.0% |
| AAGAATCATTGTTCGGATTA+TGG | - | chr3_4:74349861-74349880 | None:intergenic | 30.0% | |
| AACATTACATGTACTAACCA+GGG | - | chr3_4:74350197-74350216 | None:intergenic | 30.0% | |
| ! | ACATGTAATGTTCAAGTTCA+TGG | + | chr3_4:74350205-74350224 | Msa0521490:intron | 30.0% |
| TAATTACTATGCAGATTGGA+TGG | + | chr3_4:74350368-74350387 | Msa0521490:intron | 30.0% | |
| ! | GTTAACTTTTCGGATGAAAA+CGG | - | chr3_4:74350780-74350799 | None:intergenic | 30.0% |
| TATCATGAAGAATACCATTG+AGG | + | chr3_4:74350848-74350867 | Msa0521490:CDS | 30.0% | |
| CAAAATGCTAAAATCAACCA+TGG | - | chr3_4:74350931-74350950 | None:intergenic | 30.0% | |
| !!! | GATTTTAGCATTTTGAAGCT+TGG | + | chr3_4:74350936-74350955 | Msa0521490:CDS | 30.0% |
| ATTAATGAAGCTAACTGCAA+GGG | + | chr3_4:74351034-74351053 | Msa0521490:CDS | 30.0% | |
| AAAGCAGTGCAAATTATTCA+AGG | - | chr3_4:74351359-74351378 | None:intergenic | 30.0% | |
| ACATACAACATAACACATCA+TGG | - | chr3_4:74351439-74351458 | None:intergenic | 30.0% | |
| TGTATTTGCAACCAAGCTTT+AGG | + | chr3_4:74347134-74347153 | Msa0521490:five_prime_UTR | 35.0% | |
| AGAAGAAGGTAGTTCATACT+GGG | - | chr3_4:74347177-74347196 | None:intergenic | 35.0% | |
| TAGAAGAAGGTAGTTCATAC+TGG | - | chr3_4:74347178-74347197 | None:intergenic | 35.0% | |
| GGTGTATGTTTAAAAGGCTT+TGG | + | chr3_4:74347499-74347518 | Msa0521490:intron | 35.0% | |
| !!! | GTTAGACCATTTTGATTGTC+TGG | + | chr3_4:74347543-74347562 | Msa0521490:intron | 35.0% |
| !! | ATGTTTTCCTCGTTGTTGTT+TGG | + | chr3_4:74347589-74347608 | Msa0521490:intron | 35.0% |
| !! | TTTTGGTTAGGCATGACAAT+GGG | + | chr3_4:74347649-74347668 | Msa0521490:intron | 35.0% |
| AGGGTAACGTGTAAGTATAT+GGG | - | chr3_4:74347720-74347739 | None:intergenic | 35.0% | |
| TAGGGTAACGTGTAAGTATA+TGG | - | chr3_4:74347721-74347740 | None:intergenic | 35.0% | |
| ! | AATTGATTCATTGCGGGTAT+GGG | - | chr3_4:74347816-74347835 | None:intergenic | 35.0% |
| ! | AAATTGATTCATTGCGGGTA+TGG | - | chr3_4:74347817-74347836 | None:intergenic | 35.0% |
| !!! | GTTTTAGAGATATGTGGTGT+GGG | - | chr3_4:74348078-74348097 | None:intergenic | 35.0% |
| !!! | AGTTTTAGAGATATGTGGTG+TGG | - | chr3_4:74348079-74348098 | None:intergenic | 35.0% |
| AAAAGAAGAAATGAGTACGG+CGG | - | chr3_4:74348123-74348142 | None:intergenic | 35.0% | |
| CGATTTCAAAATATGGGTAC+GGG | - | chr3_4:74348536-74348555 | None:intergenic | 35.0% | |
| CCGATTTCAAAATATGGGTA+CGG | - | chr3_4:74348537-74348556 | None:intergenic | 35.0% | |
| !!! | CCGTACCCATATTTTGAAAT+CGG | + | chr3_4:74348534-74348553 | Msa0521490:intron | 35.0% |
| !!! | CGTACCCATATTTTGAAATC+GGG | + | chr3_4:74348535-74348554 | Msa0521490:intron | 35.0% |
| ! | TTTGTTGCTATGCCTAGTTT+TGG | + | chr3_4:74348647-74348666 | Msa0521490:intron | 35.0% |
| !!! | TGCACATTTTTGTGTTGCTT+TGG | + | chr3_4:74348673-74348692 | Msa0521490:intron | 35.0% |
| AAAATGACTCCAAAATGGGA+CGG | + | chr3_4:74349414-74349433 | Msa0521490:intron | 35.0% | |
| ! | AGGATATCAGTTATGGCTTT+TGG | - | chr3_4:74350171-74350190 | None:intergenic | 35.0% |
| GAACATTACATGTACTAACC+AGG | - | chr3_4:74350198-74350217 | None:intergenic | 35.0% | |
| CAAGTTCATGGTTCATTCTA+TGG | + | chr3_4:74350217-74350236 | Msa0521490:intron | 35.0% | |
| CATGGTTCATTCTATGGTAA+AGG | + | chr3_4:74350223-74350242 | Msa0521490:intron | 35.0% | |
| ! | GAAGACAAAAGCACAAATGT+GGG | + | chr3_4:74350390-74350409 | Msa0521490:CDS | 35.0% |
| !! | GTAAGTGTTGATACTGACAA+AGG | + | chr3_4:74350429-74350448 | Msa0521490:CDS | 35.0% |
| ACATTCACTGAGTTTCCTTT+GGG | - | chr3_4:74350459-74350478 | None:intergenic | 35.0% | |
| AACATTCACTGAGTTTCCTT+TGG | - | chr3_4:74350460-74350479 | None:intergenic | 35.0% | |
| AAAGGAAACTCAGTGAATGT+TGG | + | chr3_4:74350459-74350478 | Msa0521490:CDS | 35.0% | |
| AACTCAGTGAATGTTGGAAA+AGG | + | chr3_4:74350465-74350484 | Msa0521490:CDS | 35.0% | |
| ATCATGTAATTGAGTCTCAG+TGG | - | chr3_4:74350634-74350653 | None:intergenic | 35.0% | |
| AGAAGAATAATGCTGCTCTA+GGG | - | chr3_4:74350659-74350678 | None:intergenic | 35.0% | |
| AAGAAGAATAATGCTGCTCT+AGG | - | chr3_4:74350660-74350679 | None:intergenic | 35.0% | |
| TAGAGCAGCATTATTCTTCT+TGG | + | chr3_4:74350659-74350678 | Msa0521490:CDS | 35.0% | |
| !! | GAAGCTTGGAAAAAGTGTTA+AGG | + | chr3_4:74350950-74350969 | Msa0521490:CDS | 35.0% |
| AAGTGTTAAGGTTGTGTCTA+CGG | + | chr3_4:74350962-74350981 | Msa0521490:CDS | 35.0% | |
| GATTAATGAAGCTAACTGCA+AGG | + | chr3_4:74351033-74351052 | Msa0521490:CDS | 35.0% | |
| AAGAGCTTATTCTGTTCCTT+TGG | + | chr3_4:74351127-74351146 | Msa0521490:CDS | 35.0% | |
| !!! | TCCATTTTGAAGTATCTGTG+TGG | - | chr3_4:74351193-74351212 | None:intergenic | 35.0% |
| ! | ACTTGAAAAGCAAGGTGTTT+GGG | - | chr3_4:74351218-74351237 | None:intergenic | 35.0% |
| !! | TTTTGAGGACTTGAAAAGCA+AGG | - | chr3_4:74351226-74351245 | None:intergenic | 35.0% |
| AATTAAGCCAGGAACACTTT+CGG | + | chr3_4:74351244-74351263 | Msa0521490:CDS | 35.0% | |
| AGTGCAAATTATTCAAGGAC+GGG | - | chr3_4:74351354-74351373 | None:intergenic | 35.0% | |
| CAGTGCAAATTATTCAAGGA+CGG | - | chr3_4:74351355-74351374 | None:intergenic | 35.0% | |
| TAAAGCTGGAACCTAAAGCT+TGG | - | chr3_4:74347148-74347167 | None:intergenic | 40.0% | |
| !! | ATACTGGGAAGCTTTAAAGC+TGG | - | chr3_4:74347162-74347181 | None:intergenic | 40.0% |
| TCGTTAAAACGGGTAGAAGA+AGG | - | chr3_4:74347191-74347210 | None:intergenic | 40.0% | |
| AGGCTATATAGCTAGAGAAG+TGG | + | chr3_4:74347363-74347382 | Msa0521490:intron | 40.0% | |
| GGCTATATAGCTAGAGAAGT+GGG | + | chr3_4:74347364-74347383 | Msa0521490:intron | 40.0% | |
| CAACACCCAGACAATCAAAA+TGG | - | chr3_4:74347552-74347571 | None:intergenic | 40.0% | |
| !! | TTTTGATTGTCTGGGTGTTG+AGG | + | chr3_4:74347552-74347571 | Msa0521490:intron | 40.0% |
| !! | TTCCTCGTTGTTGTTTGGTT+TGG | + | chr3_4:74347594-74347613 | Msa0521490:intron | 40.0% |
| !!! | GTTTTGGTTAGGCATGACAA+TGG | + | chr3_4:74347648-74347667 | Msa0521490:intron | 40.0% |
| TTTGGTTAGGCATGACAATG+GGG | + | chr3_4:74347650-74347669 | Msa0521490:intron | 40.0% | |
| GTGTAAGTATATGGGAGTAG+GGG | - | chr3_4:74347712-74347731 | None:intergenic | 40.0% | |
| CGTGTAAGTATATGGGAGTA+GGG | - | chr3_4:74347713-74347732 | None:intergenic | 40.0% | |
| ACGTGTAAGTATATGGGAGT+AGG | - | chr3_4:74347714-74347733 | None:intergenic | 40.0% | |
| ATTCAATTTCTCATCCCCGT+TGG | - | chr3_4:74347751-74347770 | None:intergenic | 40.0% | |
| GGAAATACCCAAAACCATTG+GGG | - | chr3_4:74347785-74347804 | None:intergenic | 40.0% | |
| CGGAAATACCCAAAACCATT+GGG | - | chr3_4:74347786-74347805 | None:intergenic | 40.0% | |
| ! | ATTGATTCATTGCGGGTATG+GGG | - | chr3_4:74347815-74347834 | None:intergenic | 40.0% |
| GTGTGGGTGATTCATAACTA+GGG | - | chr3_4:74348062-74348081 | None:intergenic | 40.0% | |
| TGAAAAAACCGATAAACCGG+CGG | - | chr3_4:74348300-74348319 | None:intergenic | 40.0% | |
| !!! | CATAGTTTTAAAACCCGGCT+CGG | - | chr3_4:74348436-74348455 | None:intergenic | 40.0% |
| TTCAAAATATGGGTACGGGA+CGG | - | chr3_4:74348532-74348551 | None:intergenic | 40.0% | |
| ATTTGACTGGGTTTGGGTAT+GGG | - | chr3_4:74348572-74348591 | None:intergenic | 40.0% | |
| ATACCCAAACCCAGTCAAAT+CGG | + | chr3_4:74348572-74348591 | Msa0521490:intron | 40.0% | |
| AAATGTGCACCACCAAAACT+AGG | - | chr3_4:74348662-74348681 | None:intergenic | 40.0% | |
| !! | TTTGGTCTTGACTCTGTGAT+GGG | + | chr3_4:74348691-74348710 | Msa0521490:intron | 40.0% |
| TAGCCAATAAAATCTCAGCC+TGG | + | chr3_4:74349164-74349183 | Msa0521490:intron | 40.0% | |
| ! | ATCGACTTCCAGTAAAGTTC+AGG | - | chr3_4:74350129-74350148 | None:intergenic | 40.0% |
| ! | TCAGTTATGGCTTTTGGCAT+TGG | - | chr3_4:74350165-74350184 | None:intergenic | 40.0% |
| ATTACATGTACTAACCAGGG+TGG | - | chr3_4:74350194-74350213 | None:intergenic | 40.0% | |
| ! | GGAAGACAAAAGCACAAATG+TGG | + | chr3_4:74350389-74350408 | Msa0521490:CDS | 40.0% |
| ! | AAAAGCACAAATGTGGGTGT+AGG | + | chr3_4:74350396-74350415 | Msa0521490:CDS | 40.0% |
| AAAGCACAAATGTGGGTGTA+GGG | + | chr3_4:74350397-74350416 | Msa0521490:CDS | 40.0% | |
| ACTGACAAAGGAAAACCCAA+AGG | + | chr3_4:74350441-74350460 | Msa0521490:CDS | 40.0% | |
| TCAGTGAATGTTGGAAAAGG+AGG | + | chr3_4:74350468-74350487 | Msa0521490:CDS | 40.0% | |
| AAATGCAGGCCATAAGAGAA+AGG | + | chr3_4:74350551-74350570 | Msa0521490:CDS | 40.0% | |
| AATGCAGGCCATAAGAGAAA+GGG | + | chr3_4:74350552-74350571 | Msa0521490:CDS | 40.0% | |
| AAACCTGCAACTGTTGTAGT+TGG | + | chr3_4:74350576-74350595 | Msa0521490:CDS | 40.0% | |
| GCAGCATAGTTGTAAGCAAA+AGG | - | chr3_4:74350612-74350631 | None:intergenic | 40.0% | |
| TTGGAAAAAGACTTGCATCC+TGG | + | chr3_4:74350678-74350697 | Msa0521490:CDS | 40.0% | |
| TGTGAAGATGCAAGCATTCA+AGG | + | chr3_4:74350873-74350892 | Msa0521490:CDS | 40.0% | |
| ATCAACCATGGATTCTAGTG+AGG | - | chr3_4:74350919-74350938 | None:intergenic | 40.0% | |
| AGCTTATTCTGTTCCTTTGG+AGG | + | chr3_4:74351130-74351149 | Msa0521490:CDS | 40.0% | |
| ! | TTCCTTTGGAGGCTGATAAT+GGG | + | chr3_4:74351141-74351160 | Msa0521490:CDS | 40.0% |
| GACTAGAGTTAAAGCTGTAG+TGG | + | chr3_4:74351163-74351182 | Msa0521490:CDS | 40.0% | |
| GCCACACAGATACTTCAAAA+TGG | + | chr3_4:74351189-74351208 | Msa0521490:CDS | 40.0% | |
| ! | CTTGAAAAGCAAGGTGTTTG+GGG | - | chr3_4:74351217-74351236 | None:intergenic | 40.0% |
| ! | GACTTGAAAAGCAAGGTGTT+TGG | - | chr3_4:74351219-74351238 | None:intergenic | 40.0% |
| CAAGTCCTCAAAATTAAGCC+AGG | + | chr3_4:74351233-74351252 | Msa0521490:CDS | 40.0% | |
| ! | GTGTTCCTGGCTTAATTTTG+AGG | - | chr3_4:74351241-74351260 | None:intergenic | 40.0% |
| TTCCTGAGGATCACATTGTT+TGG | + | chr3_4:74351279-74351298 | Msa0521490:CDS | 40.0% | |
| TCCTGAGGATCACATTGTTT+GGG | + | chr3_4:74351280-74351299 | Msa0521490:CDS | 40.0% | |
| TTATTCAAGGACGGGGTAAA+AGG | - | chr3_4:74351346-74351365 | None:intergenic | 40.0% | |
| GTGCAAATTATTCAAGGACG+GGG | - | chr3_4:74351353-74351372 | None:intergenic | 40.0% | |
| ! | AGGAAGTGGGCAGTATCTTT+TGG | + | chr3_4:74347410-74347429 | Msa0521490:intron | 45.0% |
| CACCAAACCAAACAACAACG+AGG | - | chr3_4:74347599-74347618 | None:intergenic | 45.0% | |
| !! | CTCGTTGTTGTTTGGTTTGG+TGG | + | chr3_4:74347597-74347616 | Msa0521490:intron | 45.0% |
| GTTACCCTACCCATATCCAA+CGG | + | chr3_4:74347732-74347751 | Msa0521490:intron | 45.0% | |
| TTACCCTACCCATATCCAAC+GGG | + | chr3_4:74347733-74347752 | Msa0521490:intron | 45.0% | |
| TTCTCATCCCCGTTGGATAT+GGG | - | chr3_4:74347744-74347763 | None:intergenic | 45.0% | |
| TTTCTCATCCCCGTTGGATA+TGG | - | chr3_4:74347745-74347764 | None:intergenic | 45.0% | |
| ATACCCAAAACCATTGGGGA+CGG | - | chr3_4:74347781-74347800 | None:intergenic | 45.0% | |
| GCGGAAATACCCAAAACCAT+TGG | - | chr3_4:74347787-74347806 | None:intergenic | 45.0% | |
| !! | TGCATTGCAATAGTGGGCTT+GGG | - | chr3_4:74348033-74348052 | None:intergenic | 45.0% |
| !! | ATGCATTGCAATAGTGGGCT+TGG | - | chr3_4:74348034-74348053 | None:intergenic | 45.0% |
| GGTGTGGGTGATTCATAACT+AGG | - | chr3_4:74348063-74348082 | None:intergenic | 45.0% | |
| !! | TTGAGTAACCGCCGGTTTAT+CGG | + | chr3_4:74348289-74348308 | Msa0521490:intron | 45.0% |
| AAAAAACCGGTCGAGTCAAC+CGG | + | chr3_4:74348319-74348338 | Msa0521490:intron | 45.0% | |
| GATCGGTTATGCAGTTGACT+CGG | - | chr3_4:74348351-74348370 | None:intergenic | 45.0% | |
| GTTCGGGTCTCAAATTGGAT+CGG | - | chr3_4:74348368-74348387 | None:intergenic | 45.0% | |
| ! | ATCCAATTTGAGACCCGAAC+CGG | + | chr3_4:74348368-74348387 | Msa0521490:intron | 45.0% |
| AACGCTACCCGAATGTAGAA+AGG | - | chr3_4:74348470-74348489 | None:intergenic | 45.0% | |
| TTCTACATTCGGGTAGCGTT+TGG | + | chr3_4:74348470-74348489 | Msa0521490:intron | 45.0% | |
| TCTACATTCGGGTAGCGTTT+GGG | + | chr3_4:74348471-74348490 | Msa0521490:intron | 45.0% | |
| TCAAAATATGGGTACGGGAC+GGG | - | chr3_4:74348531-74348550 | None:intergenic | 45.0% | |
| GATTTGACTGGGTTTGGGTA+TGG | - | chr3_4:74348573-74348592 | None:intergenic | 45.0% | |
| TACCCAAACCCAGTCAAATC+GGG | + | chr3_4:74348573-74348592 | Msa0521490:intron | 45.0% | |
| !! | GGATTTTCCCCGATTTGACT+GGG | - | chr3_4:74348584-74348603 | None:intergenic | 45.0% |
| AAAATCCGTCAAATCCGGGT+TGG | + | chr3_4:74348597-74348616 | Msa0521490:intron | 45.0% | |
| !!! | GTTGCTATGCCTAGTTTTGG+TGG | + | chr3_4:74348650-74348669 | Msa0521490:intron | 45.0% |
| !! | CTTTGGTCTTGACTCTGTGA+TGG | + | chr3_4:74348690-74348709 | Msa0521490:intron | 45.0% |
| CAATAAAATCTCAGCCTGGC+CGG | + | chr3_4:74349168-74349187 | Msa0521490:intron | 45.0% | |
| CTCTACCTCCTGAACTTTAC+TGG | + | chr3_4:74350118-74350137 | Msa0521490:CDS | 45.0% | |
| GACTTCCAGTAAAGTTCAGG+AGG | - | chr3_4:74350126-74350145 | None:intergenic | 45.0% | |
| AGGGTGGAGGATATCAGTTA+TGG | - | chr3_4:74350178-74350197 | None:intergenic | 45.0% | |
| ATAACTGATATCCTCCACCC+TGG | + | chr3_4:74350177-74350196 | Msa0521490:CDS | 45.0% | |
| ACAAATGTGGGTGTAGGGAA+AGG | + | chr3_4:74350402-74350421 | Msa0521490:CDS | 45.0% | |
| GTAAATGTCCATGCAGGAAG+AGG | + | chr3_4:74350492-74350511 | Msa0521490:CDS | 45.0% | |
| !! | AGAGGTGCTAATGTCAACGT+TGG | + | chr3_4:74350510-74350529 | Msa0521490:CDS | 45.0% |
| GGAGGAGTTTCTGTAAATGC+AGG | + | chr3_4:74350537-74350556 | Msa0521490:CDS | 45.0% | |
| ATGCAGGCCATAAGAGAAAG+GGG | + | chr3_4:74350553-74350572 | Msa0521490:CDS | 45.0% | |
| CAGGTTTCCCCTTTCTCTTA+TGG | - | chr3_4:74350563-74350582 | None:intergenic | 45.0% | |
| TTGTAAGCAAAAGGCGAGTG+TGG | - | chr3_4:74350603-74350622 | None:intergenic | 45.0% | |
| AACTTGTCGAGGCAAGAATG+CGG | - | chr3_4:74350745-74350764 | None:intergenic | 45.0% | |
| TGCATCTTCACACTCCTCAA+TGG | - | chr3_4:74350865-74350884 | None:intergenic | 45.0% | |
| TGCAACCTCACTAGAATCCA+TGG | + | chr3_4:74350911-74350930 | Msa0521490:CDS | 45.0% | |
| TGTTAAGGTTGTGTCTACGG+TGG | + | chr3_4:74350965-74350984 | Msa0521490:CDS | 45.0% | |
| ! | TGGTAGACAACAAGAGTGCA+GGG | + | chr3_4:74350985-74351004 | Msa0521490:CDS | 45.0% |
| GAAGCTAACTGCAAGGGATA+AGG | + | chr3_4:74351040-74351059 | Msa0521490:CDS | 45.0% | |
| ! | GTTCCTTTGGAGGCTGATAA+TGG | + | chr3_4:74351140-74351159 | Msa0521490:CDS | 45.0% |
| TGTGATCCTCAGGAAGAAAG+TGG | - | chr3_4:74351274-74351293 | None:intergenic | 45.0% | |
| ACCCAAACAATGTGATCCTC+AGG | - | chr3_4:74351284-74351303 | None:intergenic | 45.0% | |
| !!! | TATATTATAAACTAATATTT+TGG | - | chr3_4:74349460-74349479 | None:intergenic | 5.0% |
| !!! | AATATTAGTTTATAATATAT+AGG | + | chr3_4:74349461-74349480 | Msa0521490:intron | 5.0% |
| !!! | ATATTAGTTTATAATATATA+GGG | + | chr3_4:74349462-74349481 | Msa0521490:intron | 5.0% |
| !! | CAAAAAAAATAATAAAAAAT+TGG | - | chr3_4:74349491-74349510 | None:intergenic | 5.0% |
| !!! | CTGGGTGTTGAGGAGTGTTT+TGG | + | chr3_4:74347562-74347581 | Msa0521490:intron | 50.0% |
| GTTAGGCATGACAATGGGGT+GGG | + | chr3_4:74347654-74347673 | Msa0521490:intron | 50.0% | |
| GTATATGGGAGTAGGGGATG+AGG | - | chr3_4:74347706-74347725 | None:intergenic | 50.0% | |
| TACCCTACCCATATCCAACG+GGG | + | chr3_4:74347734-74347753 | Msa0521490:intron | 50.0% | |
| ATCCCCGTTGGATATGGGTA+GGG | - | chr3_4:74347739-74347758 | None:intergenic | 50.0% | |
| TACCCAAAACCATTGGGGAC+GGG | - | chr3_4:74347780-74347799 | None:intergenic | 50.0% | |
| TTCATTGCGGGTATGGGGAT+GGG | - | chr3_4:74347810-74347829 | None:intergenic | 50.0% | |
| ATTCATTGCGGGTATGGGGA+TGG | - | chr3_4:74347811-74347830 | None:intergenic | 50.0% | |
| AAACCGGCGGTTACTCAACT+CGG | - | chr3_4:74348287-74348306 | None:intergenic | 50.0% | |
| !! | AACCGGTTCGGGTCTCAAAT+TGG | - | chr3_4:74348373-74348392 | None:intergenic | 50.0% |
| AACCGGTGGTATAACCGGTT+CGG | - | chr3_4:74348385-74348404 | None:intergenic | 50.0% | |
| !!! | TTTTAAAACCCGGCTCGGAC+CGG | - | chr3_4:74348431-74348450 | None:intergenic | 50.0% |
| ATTCGGGTAGCGTTTGGGTA+TGG | + | chr3_4:74348476-74348495 | Msa0521490:intron | 50.0% | |
| TTCGGGTAGCGTTTGGGTAT+GGG | + | chr3_4:74348477-74348496 | Msa0521490:intron | 50.0% | |
| GTAGCGTTTGGGTATGGGTT+CGG | + | chr3_4:74348482-74348501 | Msa0521490:intron | 50.0% | |
| TAGCGTTTGGGTATGGGTTC+GGG | + | chr3_4:74348483-74348502 | Msa0521490:intron | 50.0% | |
| CTGGGTTTGGGTATGGGTTT+GGG | - | chr3_4:74348566-74348585 | None:intergenic | 50.0% | |
| ACTGGGTTTGGGTATGGGTT+TGG | - | chr3_4:74348567-74348586 | None:intergenic | 50.0% | |
| ACCCAAACCCAGTCAAATCG+GGG | + | chr3_4:74348574-74348593 | Msa0521490:intron | 50.0% | |
| ! | TCCCCGATTTGACTGGGTTT+GGG | - | chr3_4:74348578-74348597 | None:intergenic | 50.0% |
| ! | TTCCCCGATTTGACTGGGTT+TGG | - | chr3_4:74348579-74348598 | None:intergenic | 50.0% |
| !! | CGGATTTTCCCCGATTTGAC+TGG | - | chr3_4:74348585-74348604 | None:intergenic | 50.0% |
| CGGGGAAAATCCGTCAAATC+CGG | + | chr3_4:74348592-74348611 | Msa0521490:intron | 50.0% | |
| GGGGAAAATCCGTCAAATCC+GGG | + | chr3_4:74348593-74348612 | Msa0521490:intron | 50.0% | |
| CCAAACCAACCCGGATTTGA+CGG | - | chr3_4:74348605-74348624 | None:intergenic | 50.0% | |
| !! | CAAATCCGGGTTGGTTTGGA+CGG | + | chr3_4:74348606-74348625 | Msa0521490:intron | 50.0% |
| !! | AAATCCGGGTTGGTTTGGAC+GGG | + | chr3_4:74348607-74348626 | Msa0521490:intron | 50.0% |
| ! | CGGCCAGGCTGAGATTTTAT+TGG | - | chr3_4:74349170-74349189 | None:intergenic | 50.0% |
| !!! | TATGGCTTTTGGCATTGGCG+TGG | - | chr3_4:74350160-74350179 | None:intergenic | 50.0% |
| ACATGTACTAACCAGGGTGG+AGG | - | chr3_4:74350191-74350210 | None:intergenic | 50.0% | |
| AATGTGGGTGTAGGGAAAGG+TGG | + | chr3_4:74350405-74350424 | Msa0521490:CDS | 50.0% | |
| ! | GGAGGTGTAAATGTCCATGC+AGG | + | chr3_4:74350486-74350505 | Msa0521490:CDS | 50.0% |
| CATTAGCACCTCTTCCTGCA+TGG | - | chr3_4:74350503-74350522 | None:intergenic | 50.0% | |
| GGTGCTAATGTCAACGTTGG+TGG | + | chr3_4:74350513-74350532 | Msa0521490:CDS | 50.0% | |
| ! | GCTAATGTCAACGTTGGTGG+TGG | + | chr3_4:74350516-74350535 | Msa0521490:CDS | 50.0% |
| !! | AATGTCAACGTTGGTGGTGG+AGG | + | chr3_4:74350519-74350538 | Msa0521490:CDS | 50.0% |
| GGACCAACTACAACAGTTGC+AGG | - | chr3_4:74350582-74350601 | None:intergenic | 50.0% | |
| TTCCGTCAAACCTGAGTCAG+AGG | + | chr3_4:74350818-74350837 | Msa0521490:CDS | 50.0% | |
| CTCCTCTGACTCAGGTTTGA+CGG | - | chr3_4:74350823-74350842 | None:intergenic | 50.0% | |
| ATATGAGCCTCCTCTGACTC+AGG | - | chr3_4:74350831-74350850 | None:intergenic | 50.0% | |
| AGATGCAAGCATTCAAGGCG+AGG | + | chr3_4:74350878-74350897 | Msa0521490:CDS | 50.0% | |
| ! | GTGGTAGACAACAAGAGTGC+AGG | + | chr3_4:74350984-74351003 | Msa0521490:CDS | 50.0% |
| GTCCCATTATCAGCCTCCAA+AGG | - | chr3_4:74351146-74351165 | None:intergenic | 50.0% | |
| GGTTAGGCATGACAATGGGG+TGG | + | chr3_4:74347653-74347672 | Msa0521490:intron | 55.0% | |
| GCATGACAATGGGGTGGGAT+GGG | + | chr3_4:74347659-74347678 | Msa0521490:intron | 55.0% | |
| CATGACAATGGGGTGGGATG+GGG | + | chr3_4:74347660-74347679 | Msa0521490:intron | 55.0% | |
| TGGGAGTAGGGGATGAGGAT+GGG | - | chr3_4:74347701-74347720 | None:intergenic | 55.0% | |
| ATGGGAGTAGGGGATGAGGA+TGG | - | chr3_4:74347702-74347721 | None:intergenic | 55.0% | |
| CATCCCCGTTGGATATGGGT+AGG | - | chr3_4:74347740-74347759 | None:intergenic | 55.0% | |
| AATCTCATCCCCGTCCCCAA+TGG | + | chr3_4:74347768-74347787 | Msa0521490:intron | 55.0% | |
| ! | ATCCCCGTCCCCAATGGTTT+TGG | + | chr3_4:74347774-74347793 | Msa0521490:intron | 55.0% |
| ! | TCCCCGTCCCCAATGGTTTT+GGG | + | chr3_4:74347775-74347794 | Msa0521490:intron | 55.0% |
| ACCCAAAACCATTGGGGACG+GGG | - | chr3_4:74347779-74347798 | None:intergenic | 55.0% | |
| TCATTGCGGGTATGGGGATG+GGG | - | chr3_4:74347809-74347828 | None:intergenic | 55.0% | |
| ACCCGAACCGGTTATACCAC+CGG | + | chr3_4:74348380-74348399 | Msa0521490:intron | 55.0% | |
| ! | ACCGGTGGTATAACCGGTTC+GGG | - | chr3_4:74348384-74348403 | None:intergenic | 55.0% |
| CCGTGAACCGGTGGTATAAC+CGG | - | chr3_4:74348390-74348409 | None:intergenic | 55.0% | |
| !! | CCGGTTATACCACCGGTTCA+CGG | + | chr3_4:74348387-74348406 | Msa0521490:intron | 55.0% |
| AGCGTTTGGGTATGGGTTCG+GGG | + | chr3_4:74348484-74348503 | Msa0521490:intron | 55.0% | |
| TATGGGTACGGGACGGGTAA+CGG | - | chr3_4:74348525-74348544 | None:intergenic | 55.0% | |
| !! | CCGTCAAATCCGGGTTGGTT+TGG | + | chr3_4:74348602-74348621 | Msa0521490:intron | 55.0% |
| !! | TTGGTTTGGACGGGTACCCA+TGG | + | chr3_4:74348616-74348635 | Msa0521490:intron | 55.0% |
| ! | TGGTTTGGACGGGTACCCAT+GGG | + | chr3_4:74348617-74348636 | Msa0521490:intron | 55.0% |
| GCAACAAAACCCGTGCCCAT+GGG | - | chr3_4:74348635-74348654 | None:intergenic | 55.0% | |
| AGCAACAAAACCCGTGCCCA+TGG | - | chr3_4:74348636-74348655 | None:intergenic | 55.0% | |
| TCAGCCTGGCCGGAAATCAT+GGG | + | chr3_4:74349178-74349197 | Msa0521490:intron | 55.0% | |
| ACCCACCACCCCATGATTTC+CGG | - | chr3_4:74349190-74349209 | None:intergenic | 55.0% | |
| !!! | GCTTTTGGCATTGGCGTGGT+AGG | - | chr3_4:74350156-74350175 | None:intergenic | 55.0% |
| GTTGCAGACGCAACTTGTCG+AGG | - | chr3_4:74350756-74350775 | None:intergenic | 55.0% | |
| CGTCAAACCTGAGTCAGAGG+AGG | + | chr3_4:74350821-74350840 | Msa0521490:CDS | 55.0% | |
| !! | TGGCAGACCGAAAGTGTTCC+TGG | - | chr3_4:74351254-74351273 | None:intergenic | 55.0% |
| !! | GGTCTGCCACTTTCTTCCTG+AGG | + | chr3_4:74351265-74351284 | Msa0521490:CDS | 55.0% |
| GGCATGACAATGGGGTGGGA+TGG | + | chr3_4:74347658-74347677 | Msa0521490:intron | 60.0% | |
| ACAATGGGGTGGGATGGGGA+CGG | + | chr3_4:74347664-74347683 | Msa0521490:intron | 60.0% | |
| GTAGGGGATGAGGATGGGGA+AGG | - | chr3_4:74347696-74347715 | None:intergenic | 60.0% | |
| GGGAGTAGGGGATGAGGATG+GGG | - | chr3_4:74347700-74347719 | None:intergenic | 60.0% | |
| GCGGTTACTCAACTCGGACC+GGG | - | chr3_4:74348281-74348300 | None:intergenic | 60.0% | |
| GGCGGTTACTCAACTCGGAC+CGG | - | chr3_4:74348282-74348301 | None:intergenic | 60.0% | |
| ! | GGTCCGAGTTGAGTAACCGC+CGG | + | chr3_4:74348281-74348300 | Msa0521490:intron | 60.0% |
| !! | CGTGAACCGGTTGACTCGAC+CGG | - | chr3_4:74348328-74348347 | None:intergenic | 60.0% |
| !! | GCAGTTGACTCGGCGTGAAC+CGG | - | chr3_4:74348341-74348360 | None:intergenic | 60.0% |
| GTTTGGGTATGGGTTCGGGG+TGG | + | chr3_4:74348487-74348506 | Msa0521490:intron | 60.0% | |
| ATGGGTACGGGACGGGTAAC+GGG | - | chr3_4:74348524-74348543 | None:intergenic | 60.0% | |
| GGTACCCGTCCAAACCAACC+CGG | - | chr3_4:74348614-74348633 | None:intergenic | 60.0% | |
| CTCAGCCTGGCCGGAAATCA+TGG | + | chr3_4:74349177-74349196 | Msa0521490:intron | 60.0% | |
| CAGCCTGGCCGGAAATCATG+GGG | + | chr3_4:74349179-74349198 | Msa0521490:intron | 60.0% | |
| GCCGGAAATCATGGGGTGGT+GGG | + | chr3_4:74349186-74349205 | Msa0521490:intron | 60.0% | |
| CAATGGGGTGGGATGGGGAC+GGG | + | chr3_4:74347665-74347684 | Msa0521490:intron | 65.0% | |
| TTGCGGGTATGGGGATGGGG+CGG | - | chr3_4:74347806-74347825 | None:intergenic | 65.0% | |
| !! | CCACCGGTTCACGGTCCAAC+CGG | + | chr3_4:74348396-74348415 | Msa0521490:intron | 65.0% |
| CGACCGGTTGGACCGTGAAC+CGG | - | chr3_4:74348402-74348421 | None:intergenic | 65.0% | |
| CGGTTCACGGTCCAACCGGT+CGG | + | chr3_4:74348400-74348419 | Msa0521490:intron | 65.0% | |
| TGGGTACGGGACGGGTAACG+GGG | - | chr3_4:74348523-74348542 | None:intergenic | 65.0% | |
| TGGACGGGTACCCATGGGCA+CGG | + | chr3_4:74348622-74348641 | Msa0521490:intron | 65.0% | |
| CCACCCCATGATTTCCGGCC+AGG | - | chr3_4:74349185-74349204 | None:intergenic | 65.0% | |
| CCTGGCCGGAAATCATGGGG+TGG | + | chr3_4:74349182-74349201 | Msa0521490:intron | 65.0% | |
| GGCCGGAAATCATGGGGTGG+TGG | + | chr3_4:74349185-74349204 | Msa0521490:intron | 65.0% | |
| CCGGTTGGACCGTGAACCGG+TGG | - | chr3_4:74348399-74348418 | None:intergenic | 70.0% | |
| CACGGTCCAACCGGTCGGAC+CGG | + | chr3_4:74348405-74348424 | Msa0521490:intron | 70.0% | |
| !! | AAAACCCGGCTCGGACCGGC+CGG | - | chr3_4:74348427-74348446 | None:intergenic | 70.0% |
| GGACGGGTACCCATGGGCAC+GGG | + | chr3_4:74348623-74348642 | Msa0521490:intron | 70.0% | |
| GTCCAACCGGTCGGACCGGC+CGG | + | chr3_4:74348409-74348428 | Msa0521490:intron | 75.0% | |
| ! | GACCGGCCGGTCCGACCGGT+TGG | - | chr3_4:74348414-74348433 | None:intergenic | 80.0% |
| ! | CTCGGACCGGCCGGTCCGAC+CGG | - | chr3_4:74348418-74348437 | None:intergenic | 80.0% |
| ! | TCGGACCGGCCGGTCCGAGC+CGG | + | chr3_4:74348419-74348438 | Msa0521490:intron | 80.0% |
| ! | CGGACCGGCCGGTCCGAGCC+GGG | + | chr3_4:74348420-74348439 | Msa0521490:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 74347132 | 74351511 | 74347132 | ID=Msa0521490;Name=Msa0521490 |
| chr3_4 | mRNA | 74347132 | 74351511 | 74347132 | ID=Msa0521490-mRNA-1;Parent=Msa0521490;Name=Msa0521490-mRNA-1;_AED=0.06;_eAED=0.06;_QI=48|1|1|1|1|1|3|198|358 |
| chr3_4 | exon | 74347132 | 74347218 | 74347132 | ID=Msa0521490-mRNA-1:exon:21013;Parent=Msa0521490-mRNA-1 |
| chr3_4 | exon | 74350093 | 74350198 | 74350093 | ID=Msa0521490-mRNA-1:exon:21014;Parent=Msa0521490-mRNA-1 |
| chr3_4 | exon | 74350382 | 74351511 | 74350382 | ID=Msa0521490-mRNA-1:exon:21015;Parent=Msa0521490-mRNA-1 |
| chr3_4 | five_prime_UTR | 74347132 | 74347179 | 74347132 | ID=Msa0521490-mRNA-1:five_prime_utr;Parent=Msa0521490-mRNA-1 |
| chr3_4 | CDS | 74347180 | 74347218 | 74347180 | ID=Msa0521490-mRNA-1:cds;Parent=Msa0521490-mRNA-1 |
| chr3_4 | CDS | 74350093 | 74350198 | 74350093 | ID=Msa0521490-mRNA-1:cds;Parent=Msa0521490-mRNA-1 |
| chr3_4 | CDS | 74350382 | 74351313 | 74350382 | ID=Msa0521490-mRNA-1:cds;Parent=Msa0521490-mRNA-1 |
| chr3_4 | three_prime_UTR | 74351314 | 74351511 | 74351314 | ID=Msa0521490-mRNA-1:three_prime_utr;Parent=Msa0521490-mRNA-1 |
| Gene Sequence |
| Protein sequence |
