Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0521550 | XP_003603599.1 | 82.548 | 361 | 21 | 3 | 1 | 358 | 1 | 322 | 0.0 | 595 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0521550 | sp|Q08298|RD22_ARATH | 51.421 | 387 | 153 | 7 | 4 | 355 | 3 | 389 | 7.57e-125 | 367 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0521550 | G7J3E3 | 82.548 | 361 | 21 | 3 | 1 | 358 | 1 | 322 | 0.0 | 595 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015950 | Msa0521550 | 0.832185 | 1.091662e-55 | -8.615850e-47 |
| Msa0015960 | Msa0521550 | 0.830590 | 2.695069e-55 | -8.615850e-47 |
| Msa0016070 | Msa0521550 | 0.825677 | 4.114950e-54 | -8.615850e-47 |
| Msa0016080 | Msa0521550 | 0.835299 | 1.819110e-56 | -8.615850e-47 |
| Msa0028690 | Msa0521550 | 0.817884 | 2.615533e-52 | -8.615850e-47 |
| Msa0060410 | Msa0521550 | 0.837098 | 6.352029e-57 | -8.615850e-47 |
| Msa0168750 | Msa0521550 | 0.801689 | 7.997017e-49 | -8.615850e-47 |
| Msa0433650 | Msa0521550 | 0.989613 | 7.010481e-179 | -8.615850e-47 |
| Msa0477500 | Msa0521550 | 0.843380 | 1.451642e-58 | -8.615850e-47 |
| Msa0307740 | Msa0521550 | 0.813089 | 3.053434e-51 | -8.615850e-47 |
| Msa0313900 | Msa0521550 | 0.811839 | 5.726629e-51 | -8.615850e-47 |
| Msa0521490 | Msa0521550 | 0.990213 | 1.400582e-181 | -8.615850e-47 |
| Msa0521550 | Msa0661410 | 0.834564 | 2.786931e-56 | -8.615850e-47 |
| Msa0521550 | Msa0661420 | 0.836936 | 6.987143e-57 | -8.615850e-47 |
| Msa0521550 | Msa0810330 | 0.804498 | 2.098344e-49 | -8.615850e-47 |
| Msa0521550 | Msa0907880 | 0.806498 | 7.988864e-50 | -8.615850e-47 |
| Msa0521550 | Msa1044250 | 0.805613 | 1.226914e-49 | -8.615850e-47 |
| Msa0521550 | Msa1154320 | 0.809387 | 1.940696e-50 | -8.615850e-47 |
| Msa0521550 | Msa1211940 | 0.804766 | 1.845341e-49 | -8.615850e-47 |
| Msa0521550 | Msa1430950 | 0.809242 | 2.084410e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0521550 | MtrunA17_Chr3g0139431 | 82.548 | 361 | 21 | 3 | 1 | 358 | 1 | 322 | 0.0 | 595 |
| Msa0521550 | MtrunA17_Chr1g0147271 | 60.836 | 383 | 123 | 3 | 1 | 356 | 1 | 383 | 8.82e-168 | 473 |
| Msa0521550 | MtrunA17_Chr1g0146631 | 56.944 | 360 | 114 | 7 | 1 | 356 | 1 | 323 | 2.07e-140 | 401 |
| Msa0521550 | MtrunA17_Chr1g0147331 | 57.222 | 360 | 113 | 6 | 1 | 356 | 1 | 323 | 1.72e-135 | 389 |
| Msa0521550 | MtrunA17_Chr1g0147311 | 49.171 | 362 | 144 | 7 | 1 | 356 | 27 | 354 | 2.38e-116 | 341 |
| Msa0521550 | MtrunA17_Chr1g0147261 | 49.157 | 356 | 121 | 8 | 1 | 355 | 1 | 297 | 8.97e-110 | 322 |
| Msa0521550 | MtrunA17_Chr1g0147241 | 49.020 | 357 | 133 | 9 | 1 | 355 | 1 | 310 | 2.88e-109 | 322 |
| Msa0521550 | MtrunA17_Chr1g0147291 | 55.357 | 280 | 107 | 4 | 79 | 356 | 2 | 265 | 1.62e-104 | 308 |
| Msa0521550 | MtrunA17_Chr1g0147301 | 54.167 | 264 | 113 | 3 | 99 | 356 | 22 | 283 | 6.55e-101 | 299 |
| Msa0521550 | MtrunA17_Chr1g0147321 | 60.000 | 225 | 89 | 1 | 131 | 355 | 12 | 235 | 4.86e-99 | 293 |
| Msa0521550 | MtrunA17_Chr1g0147251 | 48.606 | 251 | 118 | 4 | 105 | 355 | 1 | 240 | 1.50e-82 | 251 |
| Msa0521550 | MtrunA17_Chr4g0034821 | 45.536 | 224 | 115 | 5 | 140 | 357 | 69 | 291 | 3.79e-60 | 196 |
| Msa0521550 | MtrunA17_Chr3g0144451 | 43.304 | 224 | 120 | 5 | 140 | 357 | 53 | 275 | 4.75e-57 | 187 |
| Msa0521550 | MtrunA17_Chr3g0138231 | 43.304 | 224 | 120 | 4 | 140 | 357 | 44 | 266 | 2.22e-56 | 185 |
| Msa0521550 | MtrunA17_Chr3g0144421 | 41.964 | 224 | 122 | 5 | 140 | 357 | 81 | 302 | 1.04e-53 | 179 |
| Msa0521550 | MtrunA17_Chr4g0034731 | 39.908 | 218 | 123 | 6 | 146 | 357 | 217 | 432 | 2.61e-43 | 155 |
| Msa0521550 | MtrunA17_Chr4g0034451 | 39.407 | 236 | 134 | 8 | 128 | 357 | 294 | 526 | 6.16e-42 | 153 |
| Msa0521550 | MtrunA17_Chr8g0355861 | 39.640 | 222 | 95 | 8 | 147 | 358 | 69 | 261 | 4.41e-41 | 145 |
| Msa0521550 | MtrunA17_Chr3g0144391 | 39.631 | 217 | 123 | 6 | 146 | 357 | 292 | 505 | 1.14e-40 | 149 |
| Msa0521550 | MtrunA17_Chr3g0144411 | 37.788 | 217 | 127 | 5 | 146 | 357 | 325 | 538 | 3.39e-40 | 149 |
| Msa0521550 | MtrunA17_Chr4g0034721 | 40.183 | 219 | 121 | 7 | 146 | 357 | 361 | 576 | 4.13e-40 | 149 |
| Msa0521550 | MtrunA17_Chr4g0034691 | 37.156 | 218 | 129 | 6 | 146 | 357 | 493 | 708 | 2.17e-37 | 142 |
| Msa0521550 | MtrunA17_Chr8g0355311 | 45.578 | 147 | 71 | 3 | 213 | 358 | 53 | 191 | 1.47e-35 | 128 |
| Msa0521550 | MtrunA17_Chr2g0318901 | 33.480 | 227 | 118 | 5 | 136 | 358 | 63 | 260 | 3.55e-35 | 129 |
| Msa0521550 | MtrunA17_Chr8g0355831 | 30.663 | 362 | 207 | 12 | 16 | 358 | 16 | 352 | 4.21e-35 | 132 |
| Msa0521550 | MtrunA17_Chr8g0355871 | 34.821 | 224 | 118 | 7 | 138 | 357 | 23 | 222 | 2.38e-34 | 126 |
| Msa0521550 | MtrunA17_Chr8g0355331 | 44.444 | 153 | 76 | 3 | 207 | 358 | 278 | 422 | 3.26e-34 | 130 |
| Msa0521550 | MtrunA17_Chr8g0355321 | 34.263 | 251 | 119 | 8 | 147 | 358 | 60 | 303 | 6.37e-34 | 127 |
| Msa0521550 | MtrunA17_Chr8g0355841 | 43.750 | 160 | 80 | 5 | 199 | 358 | 361 | 510 | 1.00e-33 | 130 |
| Msa0521550 | MtrunA17_Chr2g0318871 | 33.186 | 226 | 122 | 6 | 135 | 358 | 62 | 260 | 1.46e-33 | 125 |
| Msa0521550 | MtrunA17_Chr6g0485051 | 36.598 | 194 | 115 | 6 | 171 | 357 | 13 | 205 | 3.40e-33 | 122 |
| Msa0521550 | MtrunA17_Chr8g0365361 | 35.160 | 219 | 126 | 5 | 146 | 355 | 181 | 392 | 3.42e-32 | 124 |
| Msa0521550 | MtrunA17_Chr2g0318931 | 34.404 | 218 | 113 | 8 | 146 | 358 | 79 | 271 | 8.19e-32 | 120 |
| Msa0521550 | MtrunA17_Chr3g0117791 | 36.530 | 219 | 125 | 6 | 146 | 356 | 413 | 625 | 9.57e-32 | 125 |
| Msa0521550 | MtrunA17_Chr5g0413591 | 32.870 | 216 | 137 | 5 | 146 | 356 | 415 | 627 | 3.05e-31 | 124 |
| Msa0521550 | MtrunA17_Chr8g0365401 | 35.484 | 217 | 130 | 5 | 146 | 356 | 412 | 624 | 3.08e-31 | 124 |
| Msa0521550 | MtrunA17_Chr8g0365381 | 35.981 | 214 | 131 | 4 | 146 | 355 | 429 | 640 | 2.53e-30 | 122 |
| Msa0521550 | MtrunA17_Chr1g0168781 | 33.028 | 218 | 115 | 6 | 146 | 358 | 69 | 260 | 7.38e-29 | 112 |
| Msa0521550 | MtrunA17_Chr4g0076231 | 35.065 | 154 | 96 | 2 | 205 | 355 | 4 | 156 | 4.05e-24 | 97.1 |
| Msa0521550 | MtrunA17_Chr5g0412991 | 28.899 | 218 | 151 | 4 | 144 | 358 | 195 | 411 | 8.44e-24 | 101 |
| Msa0521550 | MtrunA17_Chr5g0412991 | 26.786 | 168 | 121 | 2 | 173 | 339 | 18 | 184 | 9.60e-14 | 72.0 |
| Msa0521550 | MtrunA17_Chr5g0412981 | 28.899 | 218 | 151 | 4 | 144 | 358 | 195 | 411 | 8.44e-24 | 101 |
| Msa0521550 | MtrunA17_Chr5g0412981 | 26.786 | 168 | 121 | 2 | 173 | 339 | 18 | 184 | 2.31e-13 | 70.9 |
| Msa0521550 | MtrunA17_Chr1g0147231 | 59.259 | 81 | 31 | 2 | 132 | 210 | 50 | 130 | 2.35e-23 | 94.7 |
| Msa0521550 | MtrunA17_Chr5g0412951 | 27.053 | 207 | 147 | 4 | 152 | 355 | 2 | 207 | 1.21e-19 | 86.3 |
| Msa0521550 | MtrunA17_Chr4g0034051 | 46.753 | 77 | 38 | 3 | 284 | 357 | 3 | 79 | 1.35e-18 | 79.7 |
| Msa0521550 | MtrunA17_Chr8g0371951 | 44.000 | 75 | 38 | 2 | 275 | 346 | 14 | 87 | 8.54e-17 | 74.7 |
| Msa0521550 | MtrunA17_Chr5g0413021 | 34.118 | 85 | 55 | 1 | 275 | 358 | 46 | 130 | 6.76e-14 | 68.2 |
| Msa0521550 | MtrunA17_Chr1g0147281 | 59.184 | 49 | 19 | 1 | 1 | 48 | 1 | 49 | 9.84e-13 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0521550 | AT5G25610.1 | 51.421 | 387 | 153 | 7 | 4 | 355 | 3 | 389 | 7.69e-126 | 367 |
| Msa0521550 | AT1G49320.1 | 37.991 | 229 | 130 | 6 | 139 | 356 | 51 | 278 | 5.95e-45 | 155 |
| Msa0521550 | AT1G60390.1 | 34.419 | 215 | 133 | 5 | 146 | 355 | 409 | 620 | 2.02e-32 | 128 |
| Msa0521550 | AT1G70370.2 | 35.321 | 218 | 129 | 7 | 146 | 356 | 411 | 623 | 2.85e-31 | 125 |
| Msa0521550 | AT1G70370.1 | 35.321 | 218 | 129 | 7 | 146 | 356 | 411 | 623 | 2.85e-31 | 125 |
| Msa0521550 | AT1G23760.1 | 32.719 | 217 | 136 | 5 | 146 | 356 | 407 | 619 | 4.35e-29 | 118 |
Find 98 sgRNAs with CRISPR-Local
Find 352 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATATACTGTACTAATTAATT+TGG | 0.163552 | 3_4:+74424429 | None:intergenic |
| TAGAGCAGCATTATTCTTCT+TGG | 0.210808 | 3_4:-74425075 | Msa0521550:CDS |
| TTCCTGAGGATCACATTGTT+TGG | 0.260914 | 3_4:-74424455 | Msa0521550:CDS |
| CAGGTTTCCCCTTTCTCTTA+TGG | 0.264071 | 3_4:+74425174 | None:intergenic |
| CTCTACCTCCTGAACTTTAC+TGG | 0.286328 | 3_4:-74425615 | Msa0521550:CDS |
| TGTATTTGCAACCAAGCTTT+AGG | 0.292605 | 3_4:-74428601 | Msa0521550:five_prime_UTR |
| AGGATATCAGTTATGGCTTT+TGG | 0.293944 | 3_4:+74425565 | None:intergenic |
| AACATTCACTGAGTTTCCTT+TGG | 0.295871 | 3_4:+74425277 | None:intergenic |
| ACTTGAAAAGCAAGGTGTTT+GGG | 0.310906 | 3_4:+74424519 | None:intergenic |
| GTTCCTTTGGAGGCTGATAA+TGG | 0.312970 | 3_4:-74424594 | Msa0521550:CDS |
| TTATTCAAGGACGGGGTAAA+AGG | 0.318604 | 3_4:+74424391 | None:intergenic |
| TGGCAGACCGAAAGTGTTCC+TGG | 0.327249 | 3_4:+74424483 | None:intergenic |
| TCCTGAGGATCACATTGTTT+GGG | 0.351762 | 3_4:-74424454 | Msa0521550:CDS |
| ACATTCACTGAGTTTCCTTT+GGG | 0.355872 | 3_4:+74425278 | None:intergenic |
| AAGAGCTTATTCTGTTCCTT+TGG | 0.359250 | 3_4:-74424607 | Msa0521550:CDS |
| GACTTGAAAAGCAAGGTGTT+TGG | 0.359862 | 3_4:+74424518 | None:intergenic |
| AGCTTATTCTGTTCCTTTGG+AGG | 0.380981 | 3_4:-74424604 | Msa0521550:CDS |
| GCCACACAGATACTTCAAAA+TGG | 0.382981 | 3_4:-74424545 | Msa0521550:CDS |
| ATTTAATTTGCAGCTTGTAT+TGG | 0.383994 | 3_4:-74425653 | Msa0521550:intron |
| TGACAATAAAATATAGCATA+AGG | 0.384244 | 3_4:+74424645 | None:intergenic |
| TTCCTTTGGAGGCTGATAAT+GGG | 0.385699 | 3_4:-74424593 | Msa0521550:CDS |
| CACATTGAGTATCGTTAAAA+CGG | 0.391410 | 3_4:+74428536 | None:intergenic |
| TAGAAGAAGGTAGTTCATAC+TGG | 0.406703 | 3_4:+74428560 | None:intergenic |
| GGACCAACTACAACAGTTGC+AGG | 0.416463 | 3_4:+74425155 | None:intergenic |
| ATATGAGCCTCCTCTGACTC+AGG | 0.426109 | 3_4:+74424906 | None:intergenic |
| AATTAAGCCAGGAACACTTT+CGG | 0.439258 | 3_4:-74424490 | Msa0521550:CDS |
| TGTGAAGATGCAAGCATTCA+AGG | 0.445435 | 3_4:-74424861 | Msa0521550:CDS |
| ATCGACTTCCAGTAAAGTTC+AGG | 0.453981 | 3_4:+74425607 | None:intergenic |
| CTCCTCTGACTCAGGTTTGA+CGG | 0.454121 | 3_4:+74424914 | None:intergenic |
| GAAGCTAACTGCAAAGGATA+AGG | 0.459451 | 3_4:-74424694 | Msa0521550:CDS |
| GACAATAAAATATAGCATAA+GGG | 0.473806 | 3_4:+74424646 | None:intergenic |
| AAAGCAGTGCAAATTATTCA+AGG | 0.475657 | 3_4:+74424378 | None:intergenic |
| AAGAAGAATAATGCTGCTCT+AGG | 0.481299 | 3_4:+74425077 | None:intergenic |
| CAAGTCCTCAAAATTAAGCC+AGG | 0.485589 | 3_4:-74424501 | Msa0521550:CDS |
| ACCCAAACAATGTGATCCTC+AGG | 0.494013 | 3_4:+74424453 | None:intergenic |
| AAGTGTTAAGGTTGTGTCTA+CGG | 0.496910 | 3_4:-74424772 | Msa0521550:CDS |
| GCAGCATAGTTGTAAGCAAA+AGG | 0.498866 | 3_4:+74425125 | None:intergenic |
| ACATTGAGTATCGTTAAAAC+GGG | 0.510823 | 3_4:+74428537 | None:intergenic |
| TGCATCTTCACACTCCTCAA+TGG | 0.513090 | 3_4:+74424872 | None:intergenic |
| AATGCAGGCCATAAGAGAAA+GGG | 0.513139 | 3_4:-74425182 | Msa0521550:CDS |
| AGTGCAAATTATTCAAGGAC+GGG | 0.517929 | 3_4:+74424383 | None:intergenic |
| TAAAGCTGGAACCTAAAGCT+TGG | 0.524479 | 3_4:+74428590 | None:intergenic |
| AACTCAGTGAATGTTGGAAA+AGG | 0.526849 | 3_4:-74425269 | Msa0521550:CDS |
| ATACTGGGAAGCTTTAAAGC+TGG | 0.527196 | 3_4:+74428576 | None:intergenic |
| AATGTCAACGTTGGTGGTGG+AGG | 0.529553 | 3_4:-74425215 | Msa0521550:CDS |
| AAAGCACAAATGTGGGTGTA+GGG | 0.529632 | 3_4:-74425337 | Msa0521550:CDS |
| AAATGCAGGCCATAAGAGAA+AGG | 0.530603 | 3_4:-74425183 | Msa0521550:CDS |
| AAAAGCACAAATGTGGGTGT+AGG | 0.540367 | 3_4:-74425338 | Msa0521550:CDS |
| TAATTACTATGCAGATTGGA+TGG | 0.542568 | 3_4:-74425366 | Msa0521550:intron |
| ACATACAACATAACACATCA+TGG | 0.545590 | 3_4:+74424298 | None:intergenic |
| CATTAGCACCTCTTCCTGCA+TGG | 0.546194 | 3_4:+74425234 | None:intergenic |
| GTGGTAGACAACAAGAGTGC+AGG | 0.547753 | 3_4:-74424750 | Msa0521550:CDS |
| GTAAATGTCCATGCAGGAAG+AGG | 0.558239 | 3_4:-74425242 | Msa0521550:CDS |
| AAAGGAAACTCAGTGAATGT+TGG | 0.559650 | 3_4:-74425275 | Msa0521550:CDS |
| AAACCTGCAACTGTTGTAGT+TGG | 0.560528 | 3_4:-74425158 | Msa0521550:CDS |
| TCGTTAAAACGGGTAGAAGA+AGG | 0.561572 | 3_4:+74428547 | None:intergenic |
| GGAGGAGTTTCTGTAAATGC+AGG | 0.562166 | 3_4:-74425197 | Msa0521550:CDS |
| CTTGAAAAGCAAGGTGTTTG+GGG | 0.564512 | 3_4:+74424520 | None:intergenic |
| ATTAATGAAGCTAACTGCAA+AGG | 0.567592 | 3_4:-74424700 | Msa0521550:CDS |
| GGAAGACAAAAGCACAAATG+TGG | 0.569047 | 3_4:-74425345 | Msa0521550:CDS |
| AGAAGAAGGTAGTTCATACT+GGG | 0.569084 | 3_4:+74428561 | None:intergenic |
| CAGTGCAAATTATTCAAGGA+CGG | 0.569864 | 3_4:+74424382 | None:intergenic |
| TGCAACCTCACTAGAATCCA+TGG | 0.570382 | 3_4:-74424823 | Msa0521550:CDS |
| GCTAATGTCAACGTTGGTGG+TGG | 0.571475 | 3_4:-74425218 | Msa0521550:CDS |
| GGTCTGCCACTTTCTTCCTG+AGG | 0.571878 | 3_4:-74424469 | Msa0521550:CDS |
| ACAAATGTGGGTGTAGGGAA+AGG | 0.577909 | 3_4:-74425332 | Msa0521550:CDS |
| TTGTAAGCAAAAGGCGAGTG+TGG | 0.579919 | 3_4:+74425134 | None:intergenic |
| TCAGTGAATGTTGGAAAAGG+AGG | 0.581112 | 3_4:-74425266 | Msa0521550:CDS |
| TTCCGTCAAACCTGAGTCAG+AGG | 0.585688 | 3_4:-74424916 | Msa0521550:CDS |
| AGAAGAATAATGCTGCTCTA+GGG | 0.587688 | 3_4:+74425078 | None:intergenic |
| GACTAGAGTTAAAGCTGTAG+TGG | 0.589350 | 3_4:-74424571 | Msa0521550:CDS |
| GGAGGTGTAAATGTCCATGC+AGG | 0.591971 | 3_4:-74425248 | Msa0521550:CDS |
| AGGGTGGAGGATATCAGTTA+TGG | 0.593886 | 3_4:+74425558 | None:intergenic |
| TGTGATCCTCAGGAAGAAAG+TGG | 0.602472 | 3_4:+74424463 | None:intergenic |
| CAAAATGCTAAAATCAACCA+TGG | 0.604927 | 3_4:+74424806 | None:intergenic |
| GTGTAATATTATATATAGTG+TGG | 0.606788 | 3_4:-74424252 | Msa0521550:three_prime_UTR |
| ACATGTACTAACCAGGGTGG+AGG | 0.617776 | 3_4:+74425545 | None:intergenic |
| TATCATGAAGAATACCATTG+AGG | 0.618871 | 3_4:-74424886 | Msa0521550:CDS |
| GGTGCTAATGTCAACGTTGG+TGG | 0.619780 | 3_4:-74425221 | Msa0521550:CDS |
| ATGCAGGCCATAAGAGAAAG+GGG | 0.624816 | 3_4:-74425181 | Msa0521550:CDS |
| GAAGACAAAAGCACAAATGT+GGG | 0.625768 | 3_4:-74425344 | Msa0521550:CDS |
| GTCCCATTATCAGCCTCCAA+AGG | 0.629122 | 3_4:+74424591 | None:intergenic |
| AGATGCAAGCATTCAAGGCG+AGG | 0.630805 | 3_4:-74424856 | Msa0521550:CDS |
| AATGTGGGTGTAGGGAAAGG+TGG | 0.637127 | 3_4:-74425329 | Msa0521550:CDS |
| GACTTCCAGTAAAGTTCAGG+AGG | 0.638849 | 3_4:+74425610 | None:intergenic |
| GTGCAAATTATTCAAGGACG+GGG | 0.639089 | 3_4:+74424384 | None:intergenic |
| ATCAACCATGGATTCTAGTG+AGG | 0.640745 | 3_4:+74424818 | None:intergenic |
| TGGTAGACAACAAGAGTGCA+GGG | 0.641519 | 3_4:-74424749 | Msa0521550:CDS |
| GTTGCAGACGCAACTTGTCG+AGG | 0.650442 | 3_4:+74424981 | None:intergenic |
| CGTCAAACCTGAGTCAGAGG+AGG | 0.660523 | 3_4:-74424913 | Msa0521550:CDS |
| AGAGGTGCTAATGTCAACGT+TGG | 0.663899 | 3_4:-74425224 | Msa0521550:CDS |
| AACTTGTCGAGGCAAGAATG+CGG | 0.672229 | 3_4:+74424992 | None:intergenic |
| ATCATGTAATTGAGTCTCAG+TGG | 0.679850 | 3_4:+74425103 | None:intergenic |
| ACTGACAAAGGAAAACCCAA+AGG | 0.694076 | 3_4:-74425293 | Msa0521550:CDS |
| TGTTAAGGTTGTGTCTACGG+TGG | 0.716693 | 3_4:-74424769 | Msa0521550:CDS |
| ATTACATGTACTAACCAGGG+TGG | 0.721016 | 3_4:+74425542 | None:intergenic |
| ATAACTGATATCCTCCACCC+TGG | 0.725267 | 3_4:-74425556 | Msa0521550:intron |
| GTAAGTGTTGATACTGACAA+AGG | 0.736311 | 3_4:-74425305 | Msa0521550:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATCTTTTTTTTTTTTTTGA+AGG | - | chr3_4:74424503-74424522 | Msa0521550:CDS | 10.0% |
| !!! | CAATTCAATATTTTTTTTTT+TGG | - | chr3_4:74424551-74424570 | Msa0521550:CDS | 10.0% |
| !!! | TTTTTTTTTTTAAAACGTTT+TGG | - | chr3_4:74426126-74426145 | Msa0521550:intron | 10.0% |
| !! | ATAAATAAGATTAAAATCTA+AGG | - | chr3_4:74426353-74426372 | Msa0521550:intron | 10.0% |
| !! | TAAATAAGATTAAAATCTAA+GGG | - | chr3_4:74426354-74426373 | Msa0521550:intron | 10.0% |
| !!! | TATTAGTTTATAATATATAG+GGG | - | chr3_4:74426578-74426597 | Msa0521550:intron | 10.0% |
| !!! | TATTATTTTTTTTGAAAGTA+TGG | - | chr3_4:74426612-74426631 | Msa0521550:intron | 10.0% |
| !!! | CTCATTATAAATATTATTTT+AGG | + | chr3_4:74426661-74426680 | None:intergenic | 10.0% |
| !!! | ATTCTTAGTTGATAATATTA+TGG | - | chr3_4:74424592-74424611 | Msa0521550:CDS | 15.0% |
| !! | TTATCGTTAAAACATAAAAT+TGG | - | chr3_4:74425082-74425101 | Msa0521550:CDS | 15.0% |
| !! | TATCGTTAAAACATAAAATT+GGG | - | chr3_4:74425083-74425102 | Msa0521550:CDS | 15.0% |
| !! | TATGTTTGAAAACTAATAAA+TGG | - | chr3_4:74425107-74425126 | Msa0521550:CDS | 15.0% |
| !!! | TGCTTTTAATGATATTTTTT+TGG | - | chr3_4:74425881-74425900 | Msa0521550:intron | 15.0% |
| !! | GGAAATATATGATAAAATAA+TGG | - | chr3_4:74426078-74426097 | Msa0521550:intron | 15.0% |
| !!! | TTTATTAGACATTATTTTGT+TGG | - | chr3_4:74426460-74426479 | Msa0521550:intron | 15.0% |
| !!! | ATTAGTTTATAATATATAGG+GGG | - | chr3_4:74426579-74426598 | Msa0521550:intron | 15.0% |
| !!! | TGATATATTTTGTAATGTTA+TGG | - | chr3_4:74426718-74426737 | Msa0521550:intron | 15.0% |
| !!! | GATATATTTTGTAATGTTAT+GGG | - | chr3_4:74426719-74426738 | Msa0521550:intron | 15.0% |
| !! | AATTTAAAAGAATCATTGTT+CGG | + | chr3_4:74426983-74427002 | None:intergenic | 15.0% |
| !!! | GATTCTTTTAAATTTTATCT+CGG | - | chr3_4:74426989-74427008 | Msa0521550:intron | 15.0% |
| !!! | TATAATTAACTTTTGTTTAC+TGG | - | chr3_4:74427041-74427060 | Msa0521550:intron | 15.0% |
| !!! | TTTGTAATTTAAGTTAAACA+TGG | + | chr3_4:74427069-74427088 | None:intergenic | 15.0% |
| !! | TAACAAAAGATTATCTTAAT+TGG | + | chr3_4:74427414-74427433 | None:intergenic | 15.0% |
| !!! | AAAAATATGAGTTAACTTTT+CGG | + | chr3_4:74427904-74427923 | None:intergenic | 15.0% |
| !! | ATATACTGTACTAATTAATT+TGG | + | chr3_4:74428422-74428441 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTGAAGGAAG+TGG | - | chr3_4:74424509-74424528 | Msa0521550:CDS | 20.0% |
| !!! | TTTTTTTTTTTGAAGGAAGT+GGG | - | chr3_4:74424510-74424529 | Msa0521550:CDS | 20.0% |
| !! | TATTATGGTGTATGTTTAAA+AGG | - | chr3_4:74424607-74424626 | Msa0521550:CDS | 20.0% |
| !! | GTTATGATTTAAATCAATTG+TGG | - | chr3_4:74424635-74424654 | Msa0521550:CDS | 20.0% |
| !!! | TAGTTGTTTTGTTTATGTTT+TGG | - | chr3_4:74424746-74424765 | Msa0521550:CDS | 20.0% |
| !!! | TACTAAAAATTGATTCATTG+CGG | + | chr3_4:74424937-74424956 | None:intergenic | 20.0% |
| !! | GAACTTTCATTGATATTTAA+AGG | + | chr3_4:74425048-74425067 | None:intergenic | 20.0% |
| !! | AAATATAACCTTTCTACATT+CGG | - | chr3_4:74425573-74425592 | Msa0521550:CDS | 20.0% |
| !! | AAAAGCAAAATACAAACATA+AGG | + | chr3_4:74425868-74425887 | None:intergenic | 20.0% |
| !!! | CTAGTTTTAAGTAATATTTG+AGG | - | chr3_4:74426057-74426076 | Msa0521550:intron | 20.0% |
| !!! | CAAAAAATCGACTTTTAAAA+AGG | + | chr3_4:74426156-74426175 | None:intergenic | 20.0% |
| !!! | TTATTGGCTAACATTAATTT+CGG | + | chr3_4:74426268-74426287 | None:intergenic | 20.0% |
| !! | ATGTTATCACAAGATTTATA+TGG | + | chr3_4:74426504-74426523 | None:intergenic | 20.0% |
| !! | ACGGAAATAAAAATGAAATT+AGG | - | chr3_4:74426548-74426567 | Msa0521550:intron | 20.0% |
| !! | TTTATTAACTTAGCTCAAAA+TGG | + | chr3_4:74426896-74426915 | None:intergenic | 20.0% |
| !! | ATTATAATTACTATGCAGAT+TGG | - | chr3_4:74427478-74427497 | Msa0521550:intron | 20.0% |
| !! | AAAAAATACACACTAAAATC+AGG | - | chr3_4:74428125-74428144 | Msa0521550:intron | 20.0% |
| !! | GACAATAAAATATAGCATAA+GGG | + | chr3_4:74428205-74428224 | None:intergenic | 20.0% |
| !! | TGACAATAAAATATAGCATA+AGG | + | chr3_4:74428206-74428225 | None:intergenic | 20.0% |
| !!! | ATTAGTACAGTATATTTTAG+TGG | - | chr3_4:74428427-74428446 | Msa0521550:intron | 20.0% |
| !! | GTGTAATATTATATATAGTG+TGG | - | chr3_4:74428596-74428615 | Msa0521550:five_prime_UTR | 20.0% |
| !!! | AAATATTTCTCTTCAAGTTG+TGG | - | chr3_4:74424371-74424390 | Msa0521550:three_prime_UTR | 25.0% |
| !! | GTTTCTCCTTTATTTGTATT+AGG | - | chr3_4:74424431-74424450 | Msa0521550:exon | 25.0% |
| ! | CGATTTCCTAATACAAATAA+AGG | + | chr3_4:74424440-74424459 | None:intergenic | 25.0% |
| !!! | GTTTTGTTTATGTTTTGGTT+AGG | - | chr3_4:74424751-74424770 | Msa0521550:CDS | 25.0% |
| !! | ACTAAAAATTGATTCATTGC+GGG | + | chr3_4:74424936-74424955 | None:intergenic | 25.0% |
| !!! | AGAGTTTTTTTAAGCTTCAA+TGG | - | chr3_4:74424962-74424981 | Msa0521550:CDS | 25.0% |
| ! | TTATTATGCATTGCAATAGT+GGG | + | chr3_4:74425153-74425172 | None:intergenic | 25.0% |
| ! | TAGAAAAGAAGAAATGAGTA+CGG | + | chr3_4:74425240-74425259 | None:intergenic | 25.0% |
| !!! | TTTTGAAAAAACCGATAAAC+CGG | + | chr3_4:74425417-74425436 | None:intergenic | 25.0% |
| !!! | TATCGGTTTTTTCAAAAAAC+CGG | - | chr3_4:74425420-74425439 | Msa0521550:intron | 25.0% |
| !!! | TTTTGCATAGTTTTAAAACC+CGG | + | chr3_4:74425555-74425574 | None:intergenic | 25.0% |
| ! | AATATAACCTTTCTACATTC+GGG | - | chr3_4:74425574-74425593 | Msa0521550:CDS | 25.0% |
| !! | TTTTCCCGATTTCAAAATAT+GGG | + | chr3_4:74425656-74425675 | None:intergenic | 25.0% |
| !! | TTTTTCCCGATTTCAAAATA+TGG | + | chr3_4:74425657-74425676 | None:intergenic | 25.0% |
| ! | TGATGTAGTCTATTCATTAA+TGG | - | chr3_4:74426197-74426216 | Msa0521550:intron | 25.0% |
| !! | TATTGGCTAACATTAATTTC+GGG | + | chr3_4:74426267-74426286 | None:intergenic | 25.0% |
| ! | AAAATGCTAGATATCAAGAA+TGG | + | chr3_4:74426421-74426440 | None:intergenic | 25.0% |
| !! | ATATCTAGCATTTTCCTTAA+TGG | - | chr3_4:74426427-74426446 | Msa0521550:intron | 25.0% |
| ! | TAAATATTGTCACACCATTA+AGG | + | chr3_4:74426444-74426463 | None:intergenic | 25.0% |
| ! | AGTTAAAATGACTCCAAAAT+GGG | - | chr3_4:74426525-74426544 | Msa0521550:intron | 25.0% |
| !! | TTTCTTGAATTTGAAGTACA+CGG | + | chr3_4:74426778-74426797 | None:intergenic | 25.0% |
| ! | TGGATTGAATATAGTATGTA+GGG | + | chr3_4:74427133-74427152 | None:intergenic | 25.0% |
| ! | TTGGATTGAATATAGTATGT+AGG | + | chr3_4:74427134-74427153 | None:intergenic | 25.0% |
| ! | TATCAATTATCGTAAGCAAT+TGG | + | chr3_4:74427153-74427172 | None:intergenic | 25.0% |
| !!! | ATTTAATTTGCAGCTTGTAT+TGG | - | chr3_4:74427195-74427214 | Msa0521550:intron | 25.0% |
| !!! | TTTAAGTTCATTTTTGTTCC+AGG | + | chr3_4:74427813-74427832 | None:intergenic | 25.0% |
| ! | ACATTGAGTATCGTTAAAAC+GGG | + | chr3_4:74424314-74424333 | None:intergenic | 30.0% |
| ! | CACATTGAGTATCGTTAAAA+CGG | + | chr3_4:74424315-74424334 | None:intergenic | 30.0% |
| ATCGTTATTCTTGTTACTGT+AGG | - | chr3_4:74424456-74424475 | Msa0521550:CDS | 30.0% | |
| !!! | TTAGACCATTTTGATTGTCT+GGG | - | chr3_4:74424658-74424677 | Msa0521550:CDS | 30.0% |
| TTAAAATGAGCGCAAATTGT+TGG | + | chr3_4:74425007-74425026 | None:intergenic | 30.0% | |
| GTTATTATGCATTGCAATAG+TGG | + | chr3_4:74425154-74425173 | None:intergenic | 30.0% | |
| !!! | GTTTCAGTTTTAGAGATATG+TGG | + | chr3_4:74425198-74425217 | None:intergenic | 30.0% |
| ATTTAAGAAATTGCTTGACC+CGG | - | chr3_4:74425374-74425393 | Msa0521550:intron | 30.0% | |
| TGTAGTCTATTCATTAATGG+TGG | - | chr3_4:74426200-74426219 | Msa0521550:intron | 30.0% | |
| TGATGAATTCAAGAATGACA+TGG | + | chr3_4:74426391-74426410 | None:intergenic | 30.0% | |
| !! | TAGACATTATTTTGTTGGCT+TGG | - | chr3_4:74426465-74426484 | Msa0521550:intron | 30.0% |
| CAGTTAAAATGACTCCAAAA+TGG | - | chr3_4:74426524-74426543 | Msa0521550:intron | 30.0% | |
| !! | TTTTTATTTCCGTCCCATTT+TGG | + | chr3_4:74426541-74426560 | None:intergenic | 30.0% |
| ! | TTCTTGAATTTGAAGTACAC+GGG | + | chr3_4:74426777-74426796 | None:intergenic | 30.0% |
| AAGAATCATTGTTCGGATTA+TGG | + | chr3_4:74426976-74426995 | None:intergenic | 30.0% | |
| AACATTACATGTACTAACCA+GGG | + | chr3_4:74427312-74427331 | None:intergenic | 30.0% | |
| ! | ACATGTAATGTTCAAGTTCA+TGG | - | chr3_4:74427320-74427339 | Msa0521550:intron | 30.0% |
| TAATTACTATGCAGATTGGA+TGG | - | chr3_4:74427482-74427501 | Msa0521550:intron | 30.0% | |
| ! | GTTAACTTTTCGGATGAAAA+CGG | + | chr3_4:74427894-74427913 | None:intergenic | 30.0% |
| TATCATGAAGAATACCATTG+AGG | - | chr3_4:74427962-74427981 | Msa0521550:intron | 30.0% | |
| CAAAATGCTAAAATCAACCA+TGG | + | chr3_4:74428045-74428064 | None:intergenic | 30.0% | |
| !!! | GATTTTAGCATTTTGAAGCT+TGG | - | chr3_4:74428050-74428069 | Msa0521550:intron | 30.0% |
| ATTAATGAAGCTAACTGCAA+AGG | - | chr3_4:74428148-74428167 | Msa0521550:intron | 30.0% | |
| AAAGCAGTGCAAATTATTCA+AGG | + | chr3_4:74428473-74428492 | None:intergenic | 30.0% | |
| ACATACAACATAACACATCA+TGG | + | chr3_4:74428553-74428572 | None:intergenic | 30.0% | |
| TGTATTTGCAACCAAGCTTT+AGG | - | chr3_4:74424247-74424266 | Msa0521550:three_prime_UTR | 35.0% | |
| AGAAGAAGGTAGTTCATACT+GGG | + | chr3_4:74424290-74424309 | None:intergenic | 35.0% | |
| TAGAAGAAGGTAGTTCATAC+TGG | + | chr3_4:74424291-74424310 | None:intergenic | 35.0% | |
| GGTGTATGTTTAAAAGGCTT+TGG | - | chr3_4:74424613-74424632 | Msa0521550:CDS | 35.0% | |
| !!! | GTTAGACCATTTTGATTGTC+TGG | - | chr3_4:74424657-74424676 | Msa0521550:CDS | 35.0% |
| !! | ATGTTTTCCTCGTTGTTGTT+TGG | - | chr3_4:74424703-74424722 | Msa0521550:CDS | 35.0% |
| !! | TTTTGGTTAGGCATGACAAT+GGG | - | chr3_4:74424763-74424782 | Msa0521550:CDS | 35.0% |
| AGGGTAACGTGTAAGTATAT+GGG | + | chr3_4:74424834-74424853 | None:intergenic | 35.0% | |
| TAGGGTAACGTGTAAGTATA+TGG | + | chr3_4:74424835-74424854 | None:intergenic | 35.0% | |
| ! | AATTGATTCATTGCGGGTAT+GGG | + | chr3_4:74424930-74424949 | None:intergenic | 35.0% |
| ! | AAATTGATTCATTGCGGGTA+TGG | + | chr3_4:74424931-74424950 | None:intergenic | 35.0% |
| !!! | GTTTTAGAGATATGTGGTGT+GGG | + | chr3_4:74425192-74425211 | None:intergenic | 35.0% |
| !!! | AGTTTTAGAGATATGTGGTG+TGG | + | chr3_4:74425193-74425212 | None:intergenic | 35.0% |
| AAAAGAAGAAATGAGTACGG+CGG | + | chr3_4:74425237-74425256 | None:intergenic | 35.0% | |
| CGATTTCAAAATATGGGTAC+GGG | + | chr3_4:74425650-74425669 | None:intergenic | 35.0% | |
| CCGATTTCAAAATATGGGTA+CGG | + | chr3_4:74425651-74425670 | None:intergenic | 35.0% | |
| !!! | CCGTACCCATATTTTGAAAT+CGG | - | chr3_4:74425648-74425667 | Msa0521550:intron | 35.0% |
| !!! | CGTACCCATATTTTGAAATC+GGG | - | chr3_4:74425649-74425668 | Msa0521550:intron | 35.0% |
| ! | TTTGTTGCTATGCCTAGTTT+TGG | - | chr3_4:74425761-74425780 | Msa0521550:intron | 35.0% |
| !!! | TGCACATTTTTGTGTTGCTT+TGG | - | chr3_4:74425787-74425806 | Msa0521550:intron | 35.0% |
| AAAATGACTCCAAAATGGGA+CGG | - | chr3_4:74426529-74426548 | Msa0521550:intron | 35.0% | |
| ! | AGGATATCAGTTATGGCTTT+TGG | + | chr3_4:74427286-74427305 | None:intergenic | 35.0% |
| GAACATTACATGTACTAACC+AGG | + | chr3_4:74427313-74427332 | None:intergenic | 35.0% | |
| CAAGTTCATGGTTCATTCTA+TGG | - | chr3_4:74427332-74427351 | Msa0521550:intron | 35.0% | |
| CATGGTTCATTCTATGGTAA+AGG | - | chr3_4:74427338-74427357 | Msa0521550:intron | 35.0% | |
| ! | GAAGACAAAAGCACAAATGT+GGG | - | chr3_4:74427504-74427523 | Msa0521550:intron | 35.0% |
| !! | GTAAGTGTTGATACTGACAA+AGG | - | chr3_4:74427543-74427562 | Msa0521550:intron | 35.0% |
| ACATTCACTGAGTTTCCTTT+GGG | + | chr3_4:74427573-74427592 | None:intergenic | 35.0% | |
| AACATTCACTGAGTTTCCTT+TGG | + | chr3_4:74427574-74427593 | None:intergenic | 35.0% | |
| AAAGGAAACTCAGTGAATGT+TGG | - | chr3_4:74427573-74427592 | Msa0521550:intron | 35.0% | |
| AACTCAGTGAATGTTGGAAA+AGG | - | chr3_4:74427579-74427598 | Msa0521550:intron | 35.0% | |
| ATCATGTAATTGAGTCTCAG+TGG | + | chr3_4:74427748-74427767 | None:intergenic | 35.0% | |
| AGAAGAATAATGCTGCTCTA+GGG | + | chr3_4:74427773-74427792 | None:intergenic | 35.0% | |
| AAGAAGAATAATGCTGCTCT+AGG | + | chr3_4:74427774-74427793 | None:intergenic | 35.0% | |
| TAGAGCAGCATTATTCTTCT+TGG | - | chr3_4:74427773-74427792 | Msa0521550:intron | 35.0% | |
| !! | GAAGCTTGGAAAAAGTGTTA+AGG | - | chr3_4:74428064-74428083 | Msa0521550:intron | 35.0% |
| AAGTGTTAAGGTTGTGTCTA+CGG | - | chr3_4:74428076-74428095 | Msa0521550:intron | 35.0% | |
| AAGAGCTTATTCTGTTCCTT+TGG | - | chr3_4:74428241-74428260 | Msa0521550:intron | 35.0% | |
| !!! | TCCATTTTGAAGTATCTGTG+TGG | + | chr3_4:74428307-74428326 | None:intergenic | 35.0% |
| ! | ACTTGAAAAGCAAGGTGTTT+GGG | + | chr3_4:74428332-74428351 | None:intergenic | 35.0% |
| !! | TTTTGAGGACTTGAAAAGCA+AGG | + | chr3_4:74428340-74428359 | None:intergenic | 35.0% |
| AATTAAGCCAGGAACACTTT+CGG | - | chr3_4:74428358-74428377 | Msa0521550:intron | 35.0% | |
| AGTGCAAATTATTCAAGGAC+GGG | + | chr3_4:74428468-74428487 | None:intergenic | 35.0% | |
| CAGTGCAAATTATTCAAGGA+CGG | + | chr3_4:74428469-74428488 | None:intergenic | 35.0% | |
| TAAAGCTGGAACCTAAAGCT+TGG | + | chr3_4:74424261-74424280 | None:intergenic | 40.0% | |
| !! | ATACTGGGAAGCTTTAAAGC+TGG | + | chr3_4:74424275-74424294 | None:intergenic | 40.0% |
| TCGTTAAAACGGGTAGAAGA+AGG | + | chr3_4:74424304-74424323 | None:intergenic | 40.0% | |
| AGGCTATATAGCTAGAGAAG+TGG | - | chr3_4:74424476-74424495 | Msa0521550:CDS | 40.0% | |
| GGCTATATAGCTAGAGAAGT+GGG | - | chr3_4:74424477-74424496 | Msa0521550:CDS | 40.0% | |
| CAACACCCAGACAATCAAAA+TGG | + | chr3_4:74424666-74424685 | None:intergenic | 40.0% | |
| !! | TTTTGATTGTCTGGGTGTTG+AGG | - | chr3_4:74424666-74424685 | Msa0521550:CDS | 40.0% |
| !! | TTCCTCGTTGTTGTTTGGTT+TGG | - | chr3_4:74424708-74424727 | Msa0521550:CDS | 40.0% |
| !!! | GTTTTGGTTAGGCATGACAA+TGG | - | chr3_4:74424762-74424781 | Msa0521550:CDS | 40.0% |
| TTTGGTTAGGCATGACAATG+GGG | - | chr3_4:74424764-74424783 | Msa0521550:CDS | 40.0% | |
| GTGTAAGTATATGGGAGTAG+GGG | + | chr3_4:74424826-74424845 | None:intergenic | 40.0% | |
| CGTGTAAGTATATGGGAGTA+GGG | + | chr3_4:74424827-74424846 | None:intergenic | 40.0% | |
| ACGTGTAAGTATATGGGAGT+AGG | + | chr3_4:74424828-74424847 | None:intergenic | 40.0% | |
| GTTACCCTACCCATATTCAA+CGG | - | chr3_4:74424846-74424865 | Msa0521550:CDS | 40.0% | |
| TTACCCTACCCATATTCAAC+GGG | - | chr3_4:74424847-74424866 | Msa0521550:CDS | 40.0% | |
| TTCTCATCCCCGTTGAATAT+GGG | + | chr3_4:74424858-74424877 | None:intergenic | 40.0% | |
| TTTCTCATCCCCGTTGAATA+TGG | + | chr3_4:74424859-74424878 | None:intergenic | 40.0% | |
| GGAAATACCCAAAACCATTG+GGG | + | chr3_4:74424899-74424918 | None:intergenic | 40.0% | |
| CGGAAATACCCAAAACCATT+GGG | + | chr3_4:74424900-74424919 | None:intergenic | 40.0% | |
| ! | ATTGATTCATTGCGGGTATG+GGG | + | chr3_4:74424929-74424948 | None:intergenic | 40.0% |
| GTGTGGGTGATTCATAACTA+GGG | + | chr3_4:74425176-74425195 | None:intergenic | 40.0% | |
| TGAAAAAACCGATAAACCGG+CGG | + | chr3_4:74425414-74425433 | None:intergenic | 40.0% | |
| !!! | CATAGTTTTAAAACCCGGCT+CGG | + | chr3_4:74425550-74425569 | None:intergenic | 40.0% |
| TTCAAAATATGGGTACGGGA+CGG | + | chr3_4:74425646-74425665 | None:intergenic | 40.0% | |
| ATTTGACTGGGTTTGGGTAT+GGG | + | chr3_4:74425686-74425705 | None:intergenic | 40.0% | |
| ATACCCAAACCCAGTCAAAT+CGG | - | chr3_4:74425686-74425705 | Msa0521550:intron | 40.0% | |
| AAATGTGCACCACCAAAACT+AGG | + | chr3_4:74425776-74425795 | None:intergenic | 40.0% | |
| !! | TTTGGTCTTGACTCTGTGAT+GGG | - | chr3_4:74425805-74425824 | Msa0521550:intron | 40.0% |
| TAGCCAATAAAATCTCAGCC+TGG | - | chr3_4:74426278-74426297 | Msa0521550:intron | 40.0% | |
| ! | ATCGACTTCCAGTAAAGTTC+AGG | + | chr3_4:74427244-74427263 | None:intergenic | 40.0% |
| ! | TCAGTTATGGCTTTTGGCAT+TGG | + | chr3_4:74427280-74427299 | None:intergenic | 40.0% |
| ATTACATGTACTAACCAGGG+TGG | + | chr3_4:74427309-74427328 | None:intergenic | 40.0% | |
| ! | GGAAGACAAAAGCACAAATG+TGG | - | chr3_4:74427503-74427522 | Msa0521550:intron | 40.0% |
| ! | AAAAGCACAAATGTGGGTGT+AGG | - | chr3_4:74427510-74427529 | Msa0521550:intron | 40.0% |
| AAAGCACAAATGTGGGTGTA+GGG | - | chr3_4:74427511-74427530 | Msa0521550:intron | 40.0% | |
| ACTGACAAAGGAAAACCCAA+AGG | - | chr3_4:74427555-74427574 | Msa0521550:intron | 40.0% | |
| TCAGTGAATGTTGGAAAAGG+AGG | - | chr3_4:74427582-74427601 | Msa0521550:intron | 40.0% | |
| AAATGCAGGCCATAAGAGAA+AGG | - | chr3_4:74427665-74427684 | Msa0521550:intron | 40.0% | |
| AATGCAGGCCATAAGAGAAA+GGG | - | chr3_4:74427666-74427685 | Msa0521550:intron | 40.0% | |
| AAACCTGCAACTGTTGTAGT+TGG | - | chr3_4:74427690-74427709 | Msa0521550:intron | 40.0% | |
| GCAGCATAGTTGTAAGCAAA+AGG | + | chr3_4:74427726-74427745 | None:intergenic | 40.0% | |
| TTGGAAAAAGACTTGCATCC+TGG | - | chr3_4:74427792-74427811 | Msa0521550:intron | 40.0% | |
| TGTGAAGATGCAAGCATTCA+AGG | - | chr3_4:74427987-74428006 | Msa0521550:intron | 40.0% | |
| ATCAACCATGGATTCTAGTG+AGG | + | chr3_4:74428033-74428052 | None:intergenic | 40.0% | |
| GAAGCTAACTGCAAAGGATA+AGG | - | chr3_4:74428154-74428173 | Msa0521550:intron | 40.0% | |
| AGCTTATTCTGTTCCTTTGG+AGG | - | chr3_4:74428244-74428263 | Msa0521550:intron | 40.0% | |
| ! | TTCCTTTGGAGGCTGATAAT+GGG | - | chr3_4:74428255-74428274 | Msa0521550:intron | 40.0% |
| GACTAGAGTTAAAGCTGTAG+TGG | - | chr3_4:74428277-74428296 | Msa0521550:intron | 40.0% | |
| GCCACACAGATACTTCAAAA+TGG | - | chr3_4:74428303-74428322 | Msa0521550:intron | 40.0% | |
| ! | CTTGAAAAGCAAGGTGTTTG+GGG | + | chr3_4:74428331-74428350 | None:intergenic | 40.0% |
| ! | GACTTGAAAAGCAAGGTGTT+TGG | + | chr3_4:74428333-74428352 | None:intergenic | 40.0% |
| CAAGTCCTCAAAATTAAGCC+AGG | - | chr3_4:74428347-74428366 | Msa0521550:intron | 40.0% | |
| ! | GTGTTCCTGGCTTAATTTTG+AGG | + | chr3_4:74428355-74428374 | None:intergenic | 40.0% |
| TTCCTGAGGATCACATTGTT+TGG | - | chr3_4:74428393-74428412 | Msa0521550:intron | 40.0% | |
| TCCTGAGGATCACATTGTTT+GGG | - | chr3_4:74428394-74428413 | Msa0521550:intron | 40.0% | |
| TTATTCAAGGACGGGGTAAA+AGG | + | chr3_4:74428460-74428479 | None:intergenic | 40.0% | |
| GTGCAAATTATTCAAGGACG+GGG | + | chr3_4:74428467-74428486 | None:intergenic | 40.0% | |
| ! | AGGAAGTGGGCAGTATCTTT+TGG | - | chr3_4:74424523-74424542 | Msa0521550:CDS | 45.0% |
| CACCAAACCAAACAACAACG+AGG | + | chr3_4:74424713-74424732 | None:intergenic | 45.0% | |
| !! | CTCGTTGTTGTTTGGTTTGG+TGG | - | chr3_4:74424711-74424730 | Msa0521550:CDS | 45.0% |
| TACCCTACCCATATTCAACG+GGG | - | chr3_4:74424848-74424867 | Msa0521550:CDS | 45.0% | |
| ATCCCCGTTGAATATGGGTA+GGG | + | chr3_4:74424853-74424872 | None:intergenic | 45.0% | |
| ATACCCAAAACCATTGGGGA+CGG | + | chr3_4:74424895-74424914 | None:intergenic | 45.0% | |
| GCGGAAATACCCAAAACCAT+TGG | + | chr3_4:74424901-74424920 | None:intergenic | 45.0% | |
| !! | TGCATTGCAATAGTGGGCTT+GGG | + | chr3_4:74425147-74425166 | None:intergenic | 45.0% |
| !! | ATGCATTGCAATAGTGGGCT+TGG | + | chr3_4:74425148-74425167 | None:intergenic | 45.0% |
| GGTGTGGGTGATTCATAACT+AGG | + | chr3_4:74425177-74425196 | None:intergenic | 45.0% | |
| !! | TTGAGTAACCGCCGGTTTAT+CGG | - | chr3_4:74425403-74425422 | Msa0521550:intron | 45.0% |
| AAAAAACCGGTCGAGTCAAC+CGG | - | chr3_4:74425433-74425452 | Msa0521550:intron | 45.0% | |
| GATCGGTTATGCAGTTGACT+CGG | + | chr3_4:74425465-74425484 | None:intergenic | 45.0% | |
| GTTCGGGTCTCAAATTGGAT+CGG | + | chr3_4:74425482-74425501 | None:intergenic | 45.0% | |
| ! | ATCCAATTTGAGACCCGAAC+CGG | - | chr3_4:74425482-74425501 | Msa0521550:intron | 45.0% |
| AACGCTACCCGAATGTAGAA+AGG | + | chr3_4:74425584-74425603 | None:intergenic | 45.0% | |
| TTCTACATTCGGGTAGCGTT+TGG | - | chr3_4:74425584-74425603 | Msa0521550:CDS | 45.0% | |
| TCTACATTCGGGTAGCGTTT+GGG | - | chr3_4:74425585-74425604 | Msa0521550:CDS | 45.0% | |
| TCAAAATATGGGTACGGGAC+GGG | + | chr3_4:74425645-74425664 | None:intergenic | 45.0% | |
| GATTTGACTGGGTTTGGGTA+TGG | + | chr3_4:74425687-74425706 | None:intergenic | 45.0% | |
| TACCCAAACCCAGTCAAATC+GGG | - | chr3_4:74425687-74425706 | Msa0521550:intron | 45.0% | |
| !! | GGATTTTCCCCGATTTGACT+GGG | + | chr3_4:74425698-74425717 | None:intergenic | 45.0% |
| AAAATCCGTCAAATCCGGGT+TGG | - | chr3_4:74425711-74425730 | Msa0521550:intron | 45.0% | |
| !!! | GTTGCTATGCCTAGTTTTGG+TGG | - | chr3_4:74425764-74425783 | Msa0521550:intron | 45.0% |
| !! | CTTTGGTCTTGACTCTGTGA+TGG | - | chr3_4:74425804-74425823 | Msa0521550:intron | 45.0% |
| CAATAAAATCTCAGCCTGGC+CGG | - | chr3_4:74426282-74426301 | Msa0521550:intron | 45.0% | |
| CTCTACCTCCTGAACTTTAC+TGG | - | chr3_4:74427233-74427252 | Msa0521550:intron | 45.0% | |
| GACTTCCAGTAAAGTTCAGG+AGG | + | chr3_4:74427241-74427260 | None:intergenic | 45.0% | |
| AGGGTGGAGGATATCAGTTA+TGG | + | chr3_4:74427293-74427312 | None:intergenic | 45.0% | |
| ATAACTGATATCCTCCACCC+TGG | - | chr3_4:74427292-74427311 | Msa0521550:intron | 45.0% | |
| ACAAATGTGGGTGTAGGGAA+AGG | - | chr3_4:74427516-74427535 | Msa0521550:intron | 45.0% | |
| GTAAATGTCCATGCAGGAAG+AGG | - | chr3_4:74427606-74427625 | Msa0521550:intron | 45.0% | |
| !! | AGAGGTGCTAATGTCAACGT+TGG | - | chr3_4:74427624-74427643 | Msa0521550:intron | 45.0% |
| GGAGGAGTTTCTGTAAATGC+AGG | - | chr3_4:74427651-74427670 | Msa0521550:intron | 45.0% | |
| ATGCAGGCCATAAGAGAAAG+GGG | - | chr3_4:74427667-74427686 | Msa0521550:intron | 45.0% | |
| CAGGTTTCCCCTTTCTCTTA+TGG | + | chr3_4:74427677-74427696 | None:intergenic | 45.0% | |
| TTGTAAGCAAAAGGCGAGTG+TGG | + | chr3_4:74427717-74427736 | None:intergenic | 45.0% | |
| AACTTGTCGAGGCAAGAATG+CGG | + | chr3_4:74427859-74427878 | None:intergenic | 45.0% | |
| TGCATCTTCACACTCCTCAA+TGG | + | chr3_4:74427979-74427998 | None:intergenic | 45.0% | |
| TGCAACCTCACTAGAATCCA+TGG | - | chr3_4:74428025-74428044 | Msa0521550:intron | 45.0% | |
| TGTTAAGGTTGTGTCTACGG+TGG | - | chr3_4:74428079-74428098 | Msa0521550:intron | 45.0% | |
| ! | TGGTAGACAACAAGAGTGCA+GGG | - | chr3_4:74428099-74428118 | Msa0521550:intron | 45.0% |
| ! | GTTCCTTTGGAGGCTGATAA+TGG | - | chr3_4:74428254-74428273 | Msa0521550:intron | 45.0% |
| TGTGATCCTCAGGAAGAAAG+TGG | + | chr3_4:74428388-74428407 | None:intergenic | 45.0% | |
| ACCCAAACAATGTGATCCTC+AGG | + | chr3_4:74428398-74428417 | None:intergenic | 45.0% | |
| !!! | GTTTTAAAAAAAAAAATAAT+AGG | + | chr3_4:74426122-74426141 | None:intergenic | 5.0% |
| !!! | TATATTATAAACTAATATTT+TGG | + | chr3_4:74426575-74426594 | None:intergenic | 5.0% |
| !!! | AATATTAGTTTATAATATAT+AGG | - | chr3_4:74426576-74426595 | Msa0521550:intron | 5.0% |
| !!! | ATATTAGTTTATAATATATA+GGG | - | chr3_4:74426577-74426596 | Msa0521550:intron | 5.0% |
| !! | CAAAAAAAATAATAAAAAAT+TGG | + | chr3_4:74426606-74426625 | None:intergenic | 5.0% |
| !!! | CTGGGTGTTGAGGAGTGTTT+TGG | - | chr3_4:74424676-74424695 | Msa0521550:CDS | 50.0% |
| GTTAGGCATGACAATGGGGT+GGG | - | chr3_4:74424768-74424787 | Msa0521550:CDS | 50.0% | |
| GTATATGGGAGTAGGGGATG+AGG | + | chr3_4:74424820-74424839 | None:intergenic | 50.0% | |
| CATCCCCGTTGAATATGGGT+AGG | + | chr3_4:74424854-74424873 | None:intergenic | 50.0% | |
| TACCCAAAACCATTGGGGAC+GGG | + | chr3_4:74424894-74424913 | None:intergenic | 50.0% | |
| TTCATTGCGGGTATGGGGAT+GGG | + | chr3_4:74424924-74424943 | None:intergenic | 50.0% | |
| ATTCATTGCGGGTATGGGGA+TGG | + | chr3_4:74424925-74424944 | None:intergenic | 50.0% | |
| AAACCGGCGGTTACTCAACT+CGG | + | chr3_4:74425401-74425420 | None:intergenic | 50.0% | |
| !! | AACCGGTTCGGGTCTCAAAT+TGG | + | chr3_4:74425487-74425506 | None:intergenic | 50.0% |
| AACCGGTGGTATAACCGGTT+CGG | + | chr3_4:74425499-74425518 | None:intergenic | 50.0% | |
| !!! | TTTTAAAACCCGGCTCGGAC+CGG | + | chr3_4:74425545-74425564 | None:intergenic | 50.0% |
| ATTCGGGTAGCGTTTGGGTA+TGG | - | chr3_4:74425590-74425609 | Msa0521550:CDS | 50.0% | |
| TTCGGGTAGCGTTTGGGTAT+GGG | - | chr3_4:74425591-74425610 | Msa0521550:CDS | 50.0% | |
| GTAGCGTTTGGGTATGGGTT+CGG | - | chr3_4:74425596-74425615 | Msa0521550:CDS | 50.0% | |
| TAGCGTTTGGGTATGGGTTC+GGG | - | chr3_4:74425597-74425616 | Msa0521550:CDS | 50.0% | |
| CTGGGTTTGGGTATGGGTTT+GGG | + | chr3_4:74425680-74425699 | None:intergenic | 50.0% | |
| ACTGGGTTTGGGTATGGGTT+TGG | + | chr3_4:74425681-74425700 | None:intergenic | 50.0% | |
| ACCCAAACCCAGTCAAATCG+GGG | - | chr3_4:74425688-74425707 | Msa0521550:intron | 50.0% | |
| ! | TCCCCGATTTGACTGGGTTT+GGG | + | chr3_4:74425692-74425711 | None:intergenic | 50.0% |
| ! | TTCCCCGATTTGACTGGGTT+TGG | + | chr3_4:74425693-74425712 | None:intergenic | 50.0% |
| !! | CGGATTTTCCCCGATTTGAC+TGG | + | chr3_4:74425699-74425718 | None:intergenic | 50.0% |
| CGGGGAAAATCCGTCAAATC+CGG | - | chr3_4:74425706-74425725 | Msa0521550:intron | 50.0% | |
| GGGGAAAATCCGTCAAATCC+GGG | - | chr3_4:74425707-74425726 | Msa0521550:intron | 50.0% | |
| CCAAACCAACCCGGATTTGA+CGG | + | chr3_4:74425719-74425738 | None:intergenic | 50.0% | |
| !! | CAAATCCGGGTTGGTTTGGA+CGG | - | chr3_4:74425720-74425739 | Msa0521550:intron | 50.0% |
| !! | AAATCCGGGTTGGTTTGGAC+GGG | - | chr3_4:74425721-74425740 | Msa0521550:intron | 50.0% |
| ! | CGGCCAGGCTGAGATTTTAT+TGG | + | chr3_4:74426284-74426303 | None:intergenic | 50.0% |
| !!! | TATGGCTTTTGGCATTGGCG+TGG | + | chr3_4:74427275-74427294 | None:intergenic | 50.0% |
| ACATGTACTAACCAGGGTGG+AGG | + | chr3_4:74427306-74427325 | None:intergenic | 50.0% | |
| AATGTGGGTGTAGGGAAAGG+TGG | - | chr3_4:74427519-74427538 | Msa0521550:intron | 50.0% | |
| ! | GGAGGTGTAAATGTCCATGC+AGG | - | chr3_4:74427600-74427619 | Msa0521550:intron | 50.0% |
| CATTAGCACCTCTTCCTGCA+TGG | + | chr3_4:74427617-74427636 | None:intergenic | 50.0% | |
| GGTGCTAATGTCAACGTTGG+TGG | - | chr3_4:74427627-74427646 | Msa0521550:intron | 50.0% | |
| ! | GCTAATGTCAACGTTGGTGG+TGG | - | chr3_4:74427630-74427649 | Msa0521550:intron | 50.0% |
| !! | AATGTCAACGTTGGTGGTGG+AGG | - | chr3_4:74427633-74427652 | Msa0521550:intron | 50.0% |
| GGACCAACTACAACAGTTGC+AGG | + | chr3_4:74427696-74427715 | None:intergenic | 50.0% | |
| TTCCGTCAAACCTGAGTCAG+AGG | - | chr3_4:74427932-74427951 | Msa0521550:intron | 50.0% | |
| CTCCTCTGACTCAGGTTTGA+CGG | + | chr3_4:74427937-74427956 | None:intergenic | 50.0% | |
| ATATGAGCCTCCTCTGACTC+AGG | + | chr3_4:74427945-74427964 | None:intergenic | 50.0% | |
| AGATGCAAGCATTCAAGGCG+AGG | - | chr3_4:74427992-74428011 | Msa0521550:intron | 50.0% | |
| ! | GTGGTAGACAACAAGAGTGC+AGG | - | chr3_4:74428098-74428117 | Msa0521550:intron | 50.0% |
| GTCCCATTATCAGCCTCCAA+AGG | + | chr3_4:74428260-74428279 | None:intergenic | 50.0% | |
| GGTTAGGCATGACAATGGGG+TGG | - | chr3_4:74424767-74424786 | Msa0521550:CDS | 55.0% | |
| GCATGACAATGGGGTGGGAT+GGG | - | chr3_4:74424773-74424792 | Msa0521550:CDS | 55.0% | |
| CATGACAATGGGGTGGGATG+GGG | - | chr3_4:74424774-74424793 | Msa0521550:CDS | 55.0% | |
| TGGGAGTAGGGGATGAGGAT+GGG | + | chr3_4:74424815-74424834 | None:intergenic | 55.0% | |
| ATGGGAGTAGGGGATGAGGA+TGG | + | chr3_4:74424816-74424835 | None:intergenic | 55.0% | |
| AATCTCATCCCCGTCCCCAA+TGG | - | chr3_4:74424882-74424901 | Msa0521550:CDS | 55.0% | |
| ! | ATCCCCGTCCCCAATGGTTT+TGG | - | chr3_4:74424888-74424907 | Msa0521550:CDS | 55.0% |
| ! | TCCCCGTCCCCAATGGTTTT+GGG | - | chr3_4:74424889-74424908 | Msa0521550:CDS | 55.0% |
| ACCCAAAACCATTGGGGACG+GGG | + | chr3_4:74424893-74424912 | None:intergenic | 55.0% | |
| TCATTGCGGGTATGGGGATG+GGG | + | chr3_4:74424923-74424942 | None:intergenic | 55.0% | |
| ACCCGAACCGGTTATACCAC+CGG | - | chr3_4:74425494-74425513 | Msa0521550:intron | 55.0% | |
| ! | ACCGGTGGTATAACCGGTTC+GGG | + | chr3_4:74425498-74425517 | None:intergenic | 55.0% |
| CCGTGAACCGGTGGTATAAC+CGG | + | chr3_4:74425504-74425523 | None:intergenic | 55.0% | |
| !! | CCGGTTATACCACCGGTTCA+CGG | - | chr3_4:74425501-74425520 | Msa0521550:intron | 55.0% |
| AGCGTTTGGGTATGGGTTCG+GGG | - | chr3_4:74425598-74425617 | Msa0521550:CDS | 55.0% | |
| TATGGGTACGGGACGGGTAA+CGG | + | chr3_4:74425639-74425658 | None:intergenic | 55.0% | |
| !! | CCGTCAAATCCGGGTTGGTT+TGG | - | chr3_4:74425716-74425735 | Msa0521550:intron | 55.0% |
| !! | TTGGTTTGGACGGGTACCCA+TGG | - | chr3_4:74425730-74425749 | Msa0521550:intron | 55.0% |
| ! | TGGTTTGGACGGGTACCCAT+GGG | - | chr3_4:74425731-74425750 | Msa0521550:intron | 55.0% |
| GCAACAAAACCCGTGCCCAT+GGG | + | chr3_4:74425749-74425768 | None:intergenic | 55.0% | |
| AGCAACAAAACCCGTGCCCA+TGG | + | chr3_4:74425750-74425769 | None:intergenic | 55.0% | |
| TCAGCCTGGCCGGAAATCAT+GGG | - | chr3_4:74426292-74426311 | Msa0521550:intron | 55.0% | |
| ACCCACCACCCCATGATTTC+CGG | + | chr3_4:74426304-74426323 | None:intergenic | 55.0% | |
| !!! | GCTTTTGGCATTGGCGTGGT+AGG | + | chr3_4:74427271-74427290 | None:intergenic | 55.0% |
| GTTGCAGACGCAACTTGTCG+AGG | + | chr3_4:74427870-74427889 | None:intergenic | 55.0% | |
| CGTCAAACCTGAGTCAGAGG+AGG | - | chr3_4:74427935-74427954 | Msa0521550:intron | 55.0% | |
| !! | TGGCAGACCGAAAGTGTTCC+TGG | + | chr3_4:74428368-74428387 | None:intergenic | 55.0% |
| !! | GGTCTGCCACTTTCTTCCTG+AGG | - | chr3_4:74428379-74428398 | Msa0521550:intron | 55.0% |
| GGCATGACAATGGGGTGGGA+TGG | - | chr3_4:74424772-74424791 | Msa0521550:CDS | 60.0% | |
| ACAATGGGGTGGGATGGGGA+CGG | - | chr3_4:74424778-74424797 | Msa0521550:CDS | 60.0% | |
| GTAGGGGATGAGGATGGGGA+AGG | + | chr3_4:74424810-74424829 | None:intergenic | 60.0% | |
| GGGAGTAGGGGATGAGGATG+GGG | + | chr3_4:74424814-74424833 | None:intergenic | 60.0% | |
| GCGGTTACTCAACTCGGACC+GGG | + | chr3_4:74425395-74425414 | None:intergenic | 60.0% | |
| GGCGGTTACTCAACTCGGAC+CGG | + | chr3_4:74425396-74425415 | None:intergenic | 60.0% | |
| ! | GGTCCGAGTTGAGTAACCGC+CGG | - | chr3_4:74425395-74425414 | Msa0521550:intron | 60.0% |
| !! | CGTGAACCGGTTGACTCGAC+CGG | + | chr3_4:74425442-74425461 | None:intergenic | 60.0% |
| !! | GCAGTTGACTCGGCGTGAAC+CGG | + | chr3_4:74425455-74425474 | None:intergenic | 60.0% |
| GTTTGGGTATGGGTTCGGGG+TGG | - | chr3_4:74425601-74425620 | Msa0521550:CDS | 60.0% | |
| ATGGGTACGGGACGGGTAAC+GGG | + | chr3_4:74425638-74425657 | None:intergenic | 60.0% | |
| GGTACCCGTCCAAACCAACC+CGG | + | chr3_4:74425728-74425747 | None:intergenic | 60.0% | |
| CTCAGCCTGGCCGGAAATCA+TGG | - | chr3_4:74426291-74426310 | Msa0521550:intron | 60.0% | |
| CAGCCTGGCCGGAAATCATG+GGG | - | chr3_4:74426293-74426312 | Msa0521550:intron | 60.0% | |
| GCCGGAAATCATGGGGTGGT+GGG | - | chr3_4:74426300-74426319 | Msa0521550:intron | 60.0% | |
| CAATGGGGTGGGATGGGGAC+GGG | - | chr3_4:74424779-74424798 | Msa0521550:CDS | 65.0% | |
| TTGCGGGTATGGGGATGGGG+CGG | + | chr3_4:74424920-74424939 | None:intergenic | 65.0% | |
| !! | CCACCGGTTCACGGTCCAAC+CGG | - | chr3_4:74425510-74425529 | Msa0521550:intron | 65.0% |
| CGACCGGTTGGACCGTGAAC+CGG | + | chr3_4:74425516-74425535 | None:intergenic | 65.0% | |
| CGGTTCACGGTCCAACCGGT+CGG | - | chr3_4:74425514-74425533 | Msa0521550:intron | 65.0% | |
| TGGGTACGGGACGGGTAACG+GGG | + | chr3_4:74425637-74425656 | None:intergenic | 65.0% | |
| TGGACGGGTACCCATGGGCA+CGG | - | chr3_4:74425736-74425755 | Msa0521550:intron | 65.0% | |
| CCACCCCATGATTTCCGGCC+AGG | + | chr3_4:74426299-74426318 | None:intergenic | 65.0% | |
| CCTGGCCGGAAATCATGGGG+TGG | - | chr3_4:74426296-74426315 | Msa0521550:intron | 65.0% | |
| GGCCGGAAATCATGGGGTGG+TGG | - | chr3_4:74426299-74426318 | Msa0521550:intron | 65.0% | |
| CCGGTTGGACCGTGAACCGG+TGG | + | chr3_4:74425513-74425532 | None:intergenic | 70.0% | |
| CACGGTCCAACCGGTCGGAC+CGG | - | chr3_4:74425519-74425538 | Msa0521550:intron | 70.0% | |
| !! | AAAACCCGGCTCGGACCGGC+CGG | + | chr3_4:74425541-74425560 | None:intergenic | 70.0% |
| GGACGGGTACCCATGGGCAC+GGG | - | chr3_4:74425737-74425756 | Msa0521550:intron | 70.0% | |
| GTCCAACCGGTCGGACCGGC+CGG | - | chr3_4:74425523-74425542 | Msa0521550:intron | 75.0% | |
| ! | GACCGGCCGGTCCGACCGGT+TGG | + | chr3_4:74425528-74425547 | None:intergenic | 80.0% |
| ! | CTCGGACCGGCCGGTCCGAC+CGG | + | chr3_4:74425532-74425551 | None:intergenic | 80.0% |
| ! | TCGGACCGGCCGGTCCGAGC+CGG | - | chr3_4:74425533-74425552 | Msa0521550:intron | 80.0% |
| ! | CGGACCGGCCGGTCCGAGCC+GGG | - | chr3_4:74425534-74425553 | Msa0521550:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 74424245 | 74428625 | 74424245 | ID=Msa0521550;Name=Msa0521550 |
| chr3_4 | mRNA | 74424245 | 74428625 | 74424245 | ID=Msa0521550-mRNA-1;Parent=Msa0521550;Name=Msa0521550-mRNA-1;_AED=0.03;_eAED=0.03;_QI=48|1|1|1|0.5|0.66|3|198|358 |
| chr3_4 | exon | 74424245 | 74425374 | 74424245 | ID=Msa0521550-mRNA-1:exon:21046;Parent=Msa0521550-mRNA-1 |
| chr3_4 | exon | 74425557 | 74425662 | 74425557 | ID=Msa0521550-mRNA-1:exon:21045;Parent=Msa0521550-mRNA-1 |
| chr3_4 | exon | 74428539 | 74428625 | 74428539 | ID=Msa0521550-mRNA-1:exon:21044;Parent=Msa0521550-mRNA-1 |
| chr3_4 | five_prime_UTR | 74428578 | 74428625 | 74428578 | ID=Msa0521550-mRNA-1:five_prime_utr;Parent=Msa0521550-mRNA-1 |
| chr3_4 | CDS | 74428539 | 74428577 | 74428539 | ID=Msa0521550-mRNA-1:cds;Parent=Msa0521550-mRNA-1 |
| chr3_4 | CDS | 74425557 | 74425662 | 74425557 | ID=Msa0521550-mRNA-1:cds;Parent=Msa0521550-mRNA-1 |
| chr3_4 | CDS | 74424443 | 74425374 | 74424443 | ID=Msa0521550-mRNA-1:cds;Parent=Msa0521550-mRNA-1 |
| chr3_4 | three_prime_UTR | 74424245 | 74424442 | 74424245 | ID=Msa0521550-mRNA-1:three_prime_utr;Parent=Msa0521550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
