Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0433650 | XP_003603599.1 | 82.548 | 361 | 21 | 3 | 1 | 358 | 1 | 322 | 0.0 | 595 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0433650 | sp|Q08298|RD22_ARATH | 51.421 | 387 | 153 | 7 | 4 | 355 | 3 | 389 | 9.21e-125 | 367 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0433650 | G7J3E3 | 82.548 | 361 | 21 | 3 | 1 | 358 | 1 | 322 | 0.0 | 595 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015950 | Msa0433650 | 0.829622 | 4.644510e-55 | -8.615850e-47 |
| Msa0015960 | Msa0433650 | 0.830249 | 3.267043e-55 | -8.615850e-47 |
| Msa0016070 | Msa0433650 | 0.819150 | 1.350914e-52 | -8.615850e-47 |
| Msa0016080 | Msa0433650 | 0.830565 | 2.734723e-55 | -8.615850e-47 |
| Msa0028690 | Msa0433650 | 0.815733 | 7.946512e-52 | -8.615850e-47 |
| Msa0060410 | Msa0433650 | 0.836674 | 8.146974e-57 | -8.615850e-47 |
| Msa0210610 | Msa0433650 | 0.804954 | 1.686011e-49 | -8.615850e-47 |
| Msa0402070 | Msa0433650 | -0.803344 | 3.646422e-49 | -8.615850e-47 |
| Msa0433650 | Msa0477500 | 0.845424 | 4.097015e-59 | -8.615850e-47 |
| Msa0433650 | Msa0521490 | 0.993687 | 1.715563e-201 | -8.615850e-47 |
| Msa0433650 | Msa0521550 | 0.989613 | 7.010481e-179 | -8.615850e-47 |
| Msa0433650 | Msa0657710 | 0.803449 | 3.467646e-49 | -8.615850e-47 |
| Msa0433650 | Msa0657720 | 0.806467 | 8.109021e-50 | -8.615850e-47 |
| Msa0433650 | Msa0661410 | 0.832433 | 9.481249e-56 | -8.615850e-47 |
| Msa0433650 | Msa0661420 | 0.836065 | 1.163713e-56 | -8.615850e-47 |
| Msa0433650 | Msa0702790 | 0.808876 | 2.496504e-50 | -8.615850e-47 |
| Msa0433650 | Msa0702800 | 0.801804 | 7.573219e-49 | -8.615850e-47 |
| Msa0433650 | Msa0723090 | 0.806747 | 7.077512e-50 | -8.615850e-47 |
| Msa0433650 | Msa0810330 | 0.802545 | 5.331480e-49 | -8.615850e-47 |
| Msa0433650 | Msa0828950 | 0.807266 | 5.496683e-50 | -8.615850e-47 |
| Msa0433650 | Msa0828960 | 0.800510 | 1.393444e-48 | -8.615850e-47 |
| Msa0433650 | Msa0850640 | 0.803359 | 3.619065e-49 | -8.615850e-47 |
| Msa0433650 | Msa0862480 | -0.804552 | 2.045237e-49 | -8.615850e-47 |
| Msa0433650 | Msa0907880 | 0.809271 | 2.055032e-50 | -8.615850e-47 |
| Msa0433650 | Msa1044250 | 0.809936 | 1.478795e-50 | -8.615850e-47 |
| Msa0433650 | Msa1092310 | 0.801750 | 7.769660e-49 | -8.615850e-47 |
| Msa0433650 | Msa1154320 | 0.816001 | 6.926345e-52 | -8.615850e-47 |
| Msa0433650 | Msa1211940 | 0.800759 | 1.239326e-48 | -8.615850e-47 |
| Msa0433650 | Msa1430950 | 0.806221 | 9.141434e-50 | -8.615850e-47 |
| Msa0307740 | Msa0433650 | 0.810160 | 1.323071e-50 | -8.615850e-47 |
| Msa0313900 | Msa0433650 | 0.819438 | 1.161700e-52 | -8.615850e-47 |
| Msa0343210 | Msa0433650 | 0.801747 | 7.781644e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0433650 | MtrunA17_Chr3g0139431 | 82.548 | 361 | 21 | 3 | 1 | 358 | 1 | 322 | 0.0 | 595 |
| Msa0433650 | MtrunA17_Chr1g0147271 | 60.574 | 383 | 124 | 3 | 1 | 356 | 1 | 383 | 1.40e-167 | 473 |
| Msa0433650 | MtrunA17_Chr1g0146631 | 56.667 | 360 | 115 | 7 | 1 | 356 | 1 | 323 | 4.16e-140 | 400 |
| Msa0433650 | MtrunA17_Chr1g0147331 | 56.944 | 360 | 114 | 6 | 1 | 356 | 1 | 323 | 2.84e-135 | 388 |
| Msa0433650 | MtrunA17_Chr1g0147311 | 48.895 | 362 | 145 | 7 | 1 | 356 | 27 | 354 | 4.52e-116 | 340 |
| Msa0433650 | MtrunA17_Chr1g0147261 | 49.157 | 356 | 121 | 8 | 1 | 355 | 1 | 297 | 8.97e-110 | 322 |
| Msa0433650 | MtrunA17_Chr1g0147241 | 49.020 | 357 | 133 | 9 | 1 | 355 | 1 | 310 | 2.76e-109 | 322 |
| Msa0433650 | MtrunA17_Chr1g0147291 | 55.000 | 280 | 108 | 4 | 79 | 356 | 2 | 265 | 2.98e-104 | 307 |
| Msa0433650 | MtrunA17_Chr1g0147301 | 53.788 | 264 | 114 | 3 | 99 | 356 | 22 | 283 | 1.23e-100 | 298 |
| Msa0433650 | MtrunA17_Chr1g0147321 | 59.556 | 225 | 90 | 1 | 131 | 355 | 12 | 235 | 8.38e-99 | 293 |
| Msa0433650 | MtrunA17_Chr1g0147251 | 48.606 | 251 | 118 | 4 | 105 | 355 | 1 | 240 | 1.71e-82 | 251 |
| Msa0433650 | MtrunA17_Chr4g0034821 | 45.536 | 224 | 115 | 5 | 140 | 357 | 69 | 291 | 4.13e-60 | 195 |
| Msa0433650 | MtrunA17_Chr3g0144451 | 43.304 | 224 | 120 | 5 | 140 | 357 | 53 | 275 | 5.07e-57 | 187 |
| Msa0433650 | MtrunA17_Chr3g0138231 | 43.304 | 224 | 120 | 4 | 140 | 357 | 44 | 266 | 2.20e-56 | 185 |
| Msa0433650 | MtrunA17_Chr3g0144421 | 41.964 | 224 | 122 | 5 | 140 | 357 | 81 | 302 | 1.17e-53 | 179 |
| Msa0433650 | MtrunA17_Chr4g0034731 | 39.908 | 218 | 123 | 6 | 146 | 357 | 217 | 432 | 2.89e-43 | 155 |
| Msa0433650 | MtrunA17_Chr4g0034451 | 40.000 | 240 | 127 | 10 | 128 | 357 | 294 | 526 | 4.15e-42 | 154 |
| Msa0433650 | MtrunA17_Chr8g0355861 | 39.640 | 222 | 95 | 8 | 147 | 358 | 69 | 261 | 4.46e-41 | 145 |
| Msa0433650 | MtrunA17_Chr3g0144391 | 39.631 | 217 | 123 | 6 | 146 | 357 | 292 | 505 | 1.31e-40 | 149 |
| Msa0433650 | MtrunA17_Chr3g0144411 | 37.788 | 217 | 127 | 5 | 146 | 357 | 325 | 538 | 3.53e-40 | 149 |
| Msa0433650 | MtrunA17_Chr4g0034721 | 40.183 | 219 | 121 | 7 | 146 | 357 | 361 | 576 | 5.10e-40 | 149 |
| Msa0433650 | MtrunA17_Chr4g0034691 | 37.156 | 218 | 129 | 6 | 146 | 357 | 493 | 708 | 2.82e-37 | 142 |
| Msa0433650 | MtrunA17_Chr8g0355311 | 45.578 | 147 | 71 | 3 | 213 | 358 | 53 | 191 | 1.36e-35 | 128 |
| Msa0433650 | MtrunA17_Chr2g0318901 | 33.480 | 227 | 118 | 5 | 136 | 358 | 63 | 260 | 3.94e-35 | 129 |
| Msa0433650 | MtrunA17_Chr8g0355831 | 30.663 | 362 | 207 | 12 | 16 | 358 | 16 | 352 | 4.66e-35 | 131 |
| Msa0433650 | MtrunA17_Chr8g0355871 | 34.821 | 224 | 118 | 7 | 138 | 357 | 23 | 222 | 2.33e-34 | 126 |
| Msa0433650 | MtrunA17_Chr8g0355331 | 44.444 | 153 | 76 | 3 | 207 | 358 | 278 | 422 | 3.46e-34 | 130 |
| Msa0433650 | MtrunA17_Chr8g0355321 | 34.263 | 251 | 119 | 8 | 147 | 358 | 60 | 303 | 6.78e-34 | 127 |
| Msa0433650 | MtrunA17_Chr8g0355841 | 43.750 | 160 | 80 | 5 | 199 | 358 | 361 | 510 | 1.08e-33 | 130 |
| Msa0433650 | MtrunA17_Chr2g0318871 | 33.186 | 226 | 122 | 6 | 135 | 358 | 62 | 260 | 1.56e-33 | 125 |
| Msa0433650 | MtrunA17_Chr6g0485051 | 36.598 | 194 | 115 | 6 | 171 | 357 | 13 | 205 | 3.44e-33 | 122 |
| Msa0433650 | MtrunA17_Chr8g0365361 | 35.160 | 219 | 126 | 5 | 146 | 355 | 181 | 392 | 4.11e-32 | 124 |
| Msa0433650 | MtrunA17_Chr2g0318931 | 34.404 | 218 | 113 | 8 | 146 | 358 | 79 | 271 | 9.17e-32 | 120 |
| Msa0433650 | MtrunA17_Chr3g0117791 | 36.530 | 219 | 125 | 6 | 146 | 356 | 413 | 625 | 9.66e-32 | 125 |
| Msa0433650 | MtrunA17_Chr8g0365401 | 35.484 | 217 | 130 | 5 | 146 | 356 | 412 | 624 | 3.45e-31 | 124 |
| Msa0433650 | MtrunA17_Chr5g0413591 | 32.870 | 216 | 137 | 5 | 146 | 356 | 415 | 627 | 3.81e-31 | 124 |
| Msa0433650 | MtrunA17_Chr8g0365381 | 35.981 | 214 | 131 | 4 | 146 | 355 | 429 | 640 | 2.30e-30 | 122 |
| Msa0433650 | MtrunA17_Chr1g0168781 | 33.028 | 218 | 115 | 6 | 146 | 358 | 69 | 260 | 7.69e-29 | 112 |
| Msa0433650 | MtrunA17_Chr4g0076231 | 35.065 | 154 | 96 | 2 | 205 | 355 | 4 | 156 | 4.00e-24 | 97.1 |
| Msa0433650 | MtrunA17_Chr5g0412981 | 28.899 | 218 | 151 | 4 | 144 | 358 | 195 | 411 | 9.04e-24 | 101 |
| Msa0433650 | MtrunA17_Chr5g0412981 | 26.786 | 168 | 121 | 2 | 173 | 339 | 18 | 184 | 2.44e-13 | 70.9 |
| Msa0433650 | MtrunA17_Chr5g0412991 | 28.899 | 218 | 151 | 4 | 144 | 358 | 195 | 411 | 9.22e-24 | 101 |
| Msa0433650 | MtrunA17_Chr5g0412991 | 26.786 | 168 | 121 | 2 | 173 | 339 | 18 | 184 | 1.05e-13 | 71.6 |
| Msa0433650 | MtrunA17_Chr1g0147231 | 59.259 | 81 | 31 | 2 | 132 | 210 | 50 | 130 | 2.37e-23 | 94.7 |
| Msa0433650 | MtrunA17_Chr5g0412951 | 27.053 | 207 | 147 | 4 | 152 | 355 | 2 | 207 | 1.35e-19 | 86.3 |
| Msa0433650 | MtrunA17_Chr4g0034051 | 46.753 | 77 | 38 | 3 | 284 | 357 | 3 | 79 | 1.37e-18 | 79.7 |
| Msa0433650 | MtrunA17_Chr8g0371951 | 44.000 | 75 | 38 | 2 | 275 | 346 | 14 | 87 | 8.37e-17 | 74.7 |
| Msa0433650 | MtrunA17_Chr5g0413021 | 34.118 | 85 | 55 | 1 | 275 | 358 | 46 | 130 | 7.10e-14 | 68.2 |
| Msa0433650 | MtrunA17_Chr1g0147281 | 59.184 | 49 | 19 | 1 | 1 | 48 | 1 | 49 | 9.18e-13 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0433650 | AT5G25610.1 | 51.421 | 387 | 153 | 7 | 4 | 355 | 3 | 389 | 9.36e-126 | 367 |
| Msa0433650 | AT1G49320.1 | 37.991 | 229 | 130 | 6 | 139 | 356 | 51 | 278 | 5.41e-45 | 156 |
| Msa0433650 | AT1G60390.1 | 34.419 | 215 | 133 | 5 | 146 | 355 | 409 | 620 | 2.83e-32 | 127 |
| Msa0433650 | AT1G70370.2 | 35.321 | 218 | 129 | 7 | 146 | 356 | 411 | 623 | 3.08e-31 | 124 |
| Msa0433650 | AT1G70370.1 | 35.321 | 218 | 129 | 7 | 146 | 356 | 411 | 623 | 3.08e-31 | 124 |
| Msa0433650 | AT1G23760.1 | 32.719 | 217 | 136 | 5 | 146 | 356 | 407 | 619 | 5.21e-29 | 118 |
Find 99 sgRNAs with CRISPR-Local
Find 354 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATATACTGTACTAATTAATT+TGG | 0.163552 | 3_2:+86109880 | None:intergenic |
| TAGAGCAGCATTATTCTTCT+TGG | 0.210808 | 3_2:-86110526 | Msa0433650:CDS |
| TTCCTGAGGATCACATTGTT+TGG | 0.260914 | 3_2:-86109906 | Msa0433650:CDS |
| CAGGTTTCCCCTTTCTCTTA+TGG | 0.264071 | 3_2:+86110625 | None:intergenic |
| CTCTACCTCCTGAACTTTAC+TGG | 0.286328 | 3_2:-86111066 | Msa0433650:CDS |
| TGTATTTGCAACCAAGCTTT+AGG | 0.292605 | 3_2:-86114080 | Msa0433650:five_prime_UTR |
| AGGATATCAGTTATGGCTTT+TGG | 0.293944 | 3_2:+86111016 | None:intergenic |
| AACATTCACTGAGTTTCCTT+TGG | 0.295871 | 3_2:+86110728 | None:intergenic |
| ACTTGAAAAGCAAGGTGTTT+GGG | 0.310906 | 3_2:+86109970 | None:intergenic |
| GTTCCTTTGGAGGCTGATAA+TGG | 0.312970 | 3_2:-86110045 | Msa0433650:CDS |
| TTATTCAAGGACGGGGTAAA+AGG | 0.318604 | 3_2:+86109842 | None:intergenic |
| TGGCAGACCGAAAGTGTTCC+TGG | 0.327249 | 3_2:+86109934 | None:intergenic |
| TCCTGAGGATCACATTGTTT+GGG | 0.351762 | 3_2:-86109905 | Msa0433650:CDS |
| ACATTCACTGAGTTTCCTTT+GGG | 0.355872 | 3_2:+86110729 | None:intergenic |
| AAGAGCTTATTCTGTTCCTT+TGG | 0.359250 | 3_2:-86110058 | Msa0433650:CDS |
| GACTTGAAAAGCAAGGTGTT+TGG | 0.359862 | 3_2:+86109969 | None:intergenic |
| AGCTTATTCTGTTCCTTTGG+AGG | 0.380981 | 3_2:-86110055 | Msa0433650:CDS |
| GCCACACAGATACTTCAAAA+TGG | 0.382981 | 3_2:-86109996 | Msa0433650:CDS |
| ATTTAATTTGCAGCTTGTAT+TGG | 0.383994 | 3_2:-86111104 | Msa0433650:intron |
| TGACAATAAAATATAGCATA+AGG | 0.384244 | 3_2:+86110096 | None:intergenic |
| TTCCTTTGGAGGCTGATAAT+GGG | 0.385699 | 3_2:-86110044 | Msa0433650:CDS |
| CACATTGAGTATCGTTAAAA+CGG | 0.391410 | 3_2:+86114015 | None:intergenic |
| TAGAAGAAGGTAGTTCATAC+TGG | 0.406703 | 3_2:+86114039 | None:intergenic |
| GGACCAACTACAACAGTTGC+AGG | 0.416463 | 3_2:+86110606 | None:intergenic |
| ATATGAGCCTCCTCTGACTC+AGG | 0.426109 | 3_2:+86110357 | None:intergenic |
| AATTAAGCCAGGAACACTTT+CGG | 0.439258 | 3_2:-86109941 | Msa0433650:CDS |
| TGTGAAGATGCAAGCATTCA+AGG | 0.445435 | 3_2:-86110312 | Msa0433650:CDS |
| ATCGACTTCCAGTAAAGTTC+AGG | 0.453981 | 3_2:+86111058 | None:intergenic |
| CTCCTCTGACTCAGGTTTGA+CGG | 0.454121 | 3_2:+86110365 | None:intergenic |
| GAAGCTAACTGCAAGGGATA+AGG | 0.466640 | 3_2:-86110145 | Msa0433650:CDS |
| GACAATAAAATATAGCATAA+GGG | 0.473806 | 3_2:+86110097 | None:intergenic |
| AAAGCAGTGCAAATTATTCA+AGG | 0.475657 | 3_2:+86109829 | None:intergenic |
| AAGAAGAATAATGCTGCTCT+AGG | 0.481299 | 3_2:+86110528 | None:intergenic |
| CAAGTCCTCAAAATTAAGCC+AGG | 0.485589 | 3_2:-86109952 | Msa0433650:CDS |
| ACCCAAACAATGTGATCCTC+AGG | 0.494013 | 3_2:+86109904 | None:intergenic |
| AAGTGTTAAGGTTGTGTCTA+CGG | 0.496910 | 3_2:-86110223 | Msa0433650:CDS |
| GCAGCATAGTTGTAAGCAAA+AGG | 0.498866 | 3_2:+86110576 | None:intergenic |
| ACATTGAGTATCGTTAAAAC+GGG | 0.510823 | 3_2:+86114016 | None:intergenic |
| TGCATCTTCACACTCCTCAA+TGG | 0.513090 | 3_2:+86110323 | None:intergenic |
| AATGCAGGCCATAAGAGAAA+GGG | 0.513139 | 3_2:-86110633 | Msa0433650:CDS |
| AGTGCAAATTATTCAAGGAC+GGG | 0.517929 | 3_2:+86109834 | None:intergenic |
| TAAAGCTGGAACCTAAAGCT+TGG | 0.524479 | 3_2:+86114069 | None:intergenic |
| AACTCAGTGAATGTTGGAAA+AGG | 0.526849 | 3_2:-86110720 | Msa0433650:CDS |
| ATACTGGGAAGCTTTAAAGC+TGG | 0.527196 | 3_2:+86114055 | None:intergenic |
| AATGTCAACGTTGGTGGTGG+AGG | 0.529553 | 3_2:-86110666 | Msa0433650:CDS |
| AAAGCACAAATGTGGGTGTA+GGG | 0.529632 | 3_2:-86110788 | Msa0433650:CDS |
| AAATGCAGGCCATAAGAGAA+AGG | 0.530603 | 3_2:-86110634 | Msa0433650:CDS |
| AAAAGCACAAATGTGGGTGT+AGG | 0.540367 | 3_2:-86110789 | Msa0433650:CDS |
| TAATTACTATGCAGATTGGA+TGG | 0.542568 | 3_2:-86110817 | Msa0433650:intron |
| ACATACAACATAACACATCA+TGG | 0.545590 | 3_2:+86109749 | None:intergenic |
| CATTAGCACCTCTTCCTGCA+TGG | 0.546194 | 3_2:+86110685 | None:intergenic |
| GTGGTAGACAACAAGAGTGC+AGG | 0.547753 | 3_2:-86110201 | Msa0433650:CDS |
| GTAAATGTCCATGCAGGAAG+AGG | 0.558239 | 3_2:-86110693 | Msa0433650:CDS |
| AAAGGAAACTCAGTGAATGT+TGG | 0.559650 | 3_2:-86110726 | Msa0433650:CDS |
| AAACCTGCAACTGTTGTAGT+TGG | 0.560528 | 3_2:-86110609 | Msa0433650:CDS |
| TCGTTAAAACGGGTAGAAGA+AGG | 0.561572 | 3_2:+86114026 | None:intergenic |
| GGAGGAGTTTCTGTAAATGC+AGG | 0.562166 | 3_2:-86110648 | Msa0433650:CDS |
| CTTGAAAAGCAAGGTGTTTG+GGG | 0.564512 | 3_2:+86109971 | None:intergenic |
| GGAAGACAAAAGCACAAATG+TGG | 0.569047 | 3_2:-86110796 | Msa0433650:CDS |
| AGAAGAAGGTAGTTCATACT+GGG | 0.569084 | 3_2:+86114040 | None:intergenic |
| CAGTGCAAATTATTCAAGGA+CGG | 0.569864 | 3_2:+86109833 | None:intergenic |
| TGCAACCTCACTAGAATCCA+TGG | 0.570382 | 3_2:-86110274 | Msa0433650:CDS |
| GCTAATGTCAACGTTGGTGG+TGG | 0.571475 | 3_2:-86110669 | Msa0433650:CDS |
| GGTCTGCCACTTTCTTCCTG+AGG | 0.571878 | 3_2:-86109920 | Msa0433650:CDS |
| ACAAATGTGGGTGTAGGGAA+AGG | 0.577909 | 3_2:-86110783 | Msa0433650:CDS |
| TTGTAAGCAAAAGGCGAGTG+TGG | 0.579919 | 3_2:+86110585 | None:intergenic |
| TCAGTGAATGTTGGAAAAGG+AGG | 0.581112 | 3_2:-86110717 | Msa0433650:CDS |
| TTCCGTCAAACCTGAGTCAG+AGG | 0.585688 | 3_2:-86110367 | Msa0433650:CDS |
| AGAAGAATAATGCTGCTCTA+GGG | 0.587688 | 3_2:+86110529 | None:intergenic |
| GACTAGAGTTAAAGCTGTAG+TGG | 0.589350 | 3_2:-86110022 | Msa0433650:CDS |
| GATTAATGAAGCTAACTGCA+AGG | 0.590558 | 3_2:-86110152 | Msa0433650:CDS |
| GGAGGTGTAAATGTCCATGC+AGG | 0.591971 | 3_2:-86110699 | Msa0433650:CDS |
| AGGGTGGAGGATATCAGTTA+TGG | 0.593886 | 3_2:+86111009 | None:intergenic |
| TGTGATCCTCAGGAAGAAAG+TGG | 0.602472 | 3_2:+86109914 | None:intergenic |
| CAAAATGCTAAAATCAACCA+TGG | 0.604927 | 3_2:+86110257 | None:intergenic |
| ATTAATGAAGCTAACTGCAA+GGG | 0.605328 | 3_2:-86110151 | Msa0433650:CDS |
| GTGTAATATTATATATAGTG+TGG | 0.606788 | 3_2:-86109703 | Msa0433650:three_prime_UTR |
| ACATGTACTAACCAGGGTGG+AGG | 0.617776 | 3_2:+86110996 | None:intergenic |
| TATCATGAAGAATACCATTG+AGG | 0.618871 | 3_2:-86110337 | Msa0433650:CDS |
| GGTGCTAATGTCAACGTTGG+TGG | 0.619780 | 3_2:-86110672 | Msa0433650:CDS |
| ATGCAGGCCATAAGAGAAAG+GGG | 0.624816 | 3_2:-86110632 | Msa0433650:CDS |
| GAAGACAAAAGCACAAATGT+GGG | 0.625768 | 3_2:-86110795 | Msa0433650:CDS |
| GTCCCATTATCAGCCTCCAA+AGG | 0.629122 | 3_2:+86110042 | None:intergenic |
| AGATGCAAGCATTCAAGGCG+AGG | 0.630805 | 3_2:-86110307 | Msa0433650:CDS |
| AATGTGGGTGTAGGGAAAGG+TGG | 0.637127 | 3_2:-86110780 | Msa0433650:CDS |
| GACTTCCAGTAAAGTTCAGG+AGG | 0.638849 | 3_2:+86111061 | None:intergenic |
| GTGCAAATTATTCAAGGACG+GGG | 0.639089 | 3_2:+86109835 | None:intergenic |
| ATCAACCATGGATTCTAGTG+AGG | 0.640745 | 3_2:+86110269 | None:intergenic |
| TGGTAGACAACAAGAGTGCA+GGG | 0.641519 | 3_2:-86110200 | Msa0433650:CDS |
| GTTGCAGACGCAACTTGTCG+AGG | 0.650442 | 3_2:+86110432 | None:intergenic |
| CGTCAAACCTGAGTCAGAGG+AGG | 0.660523 | 3_2:-86110364 | Msa0433650:CDS |
| AGAGGTGCTAATGTCAACGT+TGG | 0.663899 | 3_2:-86110675 | Msa0433650:CDS |
| AACTTGTCGAGGCAAGAATG+CGG | 0.672229 | 3_2:+86110443 | None:intergenic |
| ATCATGTAATTGAGTCTCAG+TGG | 0.679850 | 3_2:+86110554 | None:intergenic |
| ACTGACAAAGGAAAACCCAA+AGG | 0.694076 | 3_2:-86110744 | Msa0433650:CDS |
| TGTTAAGGTTGTGTCTACGG+TGG | 0.716693 | 3_2:-86110220 | Msa0433650:CDS |
| ATTACATGTACTAACCAGGG+TGG | 0.721016 | 3_2:+86110993 | None:intergenic |
| ATAACTGATATCCTCCACCC+TGG | 0.725267 | 3_2:-86111007 | Msa0433650:intron |
| GTAAGTGTTGATACTGACAA+AGG | 0.736311 | 3_2:-86110756 | Msa0433650:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATCTTTTTTTTTTTTTTGA+AGG | - | chr3_2:86109954-86109973 | Msa0433650:CDS | 10.0% |
| !!! | TCAATTCAATATTTTTTTTT+TGG | - | chr3_2:86110001-86110020 | Msa0433650:CDS | 10.0% |
| !!! | ACGTTTTAAAAAAAAATAAT+AGG | + | chr3_2:86111573-86111592 | None:intergenic | 10.0% |
| !!! | TATTTTTTTTTAAAACGTTT+TGG | - | chr3_2:86111575-86111594 | Msa0433650:intron | 10.0% |
| !! | ATAAATAAGATTAAAATCTA+AGG | - | chr3_2:86111802-86111821 | Msa0433650:intron | 10.0% |
| !! | TAAATAAGATTAAAATCTAA+GGG | - | chr3_2:86111803-86111822 | Msa0433650:intron | 10.0% |
| !!! | TATTAGTTTATAATATATAG+GGG | - | chr3_2:86112027-86112046 | Msa0433650:intron | 10.0% |
| !!! | TATTATTTTTTTTGAAAGTA+TGG | - | chr3_2:86112061-86112080 | Msa0433650:intron | 10.0% |
| !!! | CTCATTATAAATATTATTTT+AGG | + | chr3_2:86112110-86112129 | None:intergenic | 10.0% |
| !!! | ATTCTTAGTTGATAATATTA+TGG | - | chr3_2:86110042-86110061 | Msa0433650:CDS | 15.0% |
| !! | TTATCGTTAAAACATAAAAT+TGG | - | chr3_2:86110532-86110551 | Msa0433650:CDS | 15.0% |
| !! | TATCGTTAAAACATAAAATT+GGG | - | chr3_2:86110533-86110552 | Msa0433650:CDS | 15.0% |
| !! | TATGTTTGAAAACTAATAAA+TGG | - | chr3_2:86110557-86110576 | Msa0433650:CDS | 15.0% |
| !!! | TGCTTTTAATGATATTTTTT+TGG | - | chr3_2:86111331-86111350 | Msa0433650:intron | 15.0% |
| !! | GGAAATATATGATAAAATAA+TGG | - | chr3_2:86111529-86111548 | Msa0433650:intron | 15.0% |
| !!! | TTTATTAGACATTATTTTGT+TGG | - | chr3_2:86111909-86111928 | Msa0433650:intron | 15.0% |
| !!! | ATTAGTTTATAATATATAGG+GGG | - | chr3_2:86112028-86112047 | Msa0433650:intron | 15.0% |
| !!! | TGATATATTTTGTAATGTTA+TGG | - | chr3_2:86112167-86112186 | Msa0433650:intron | 15.0% |
| !!! | GATATATTTTGTAATGTTAT+GGG | - | chr3_2:86112168-86112187 | Msa0433650:intron | 15.0% |
| !! | TTTATTAACTTAGCTTAAAA+TGG | + | chr3_2:86112345-86112364 | None:intergenic | 15.0% |
| !! | AATTTAAAAGAATCATTGTT+CGG | + | chr3_2:86112432-86112451 | None:intergenic | 15.0% |
| !!! | GATTCTTTTAAATTTTATCT+CGG | - | chr3_2:86112438-86112457 | Msa0433650:intron | 15.0% |
| !!! | TATAATTAACTTTTGTTTAC+TGG | - | chr3_2:86112520-86112539 | Msa0433650:intron | 15.0% |
| !!! | TTTGTAATTTAAGTTAAACA+TGG | + | chr3_2:86112548-86112567 | None:intergenic | 15.0% |
| !! | TAACAAAAGATTATCTTAAT+TGG | + | chr3_2:86112893-86112912 | None:intergenic | 15.0% |
| !!! | AAAAATATGAGTTAACTTTT+CGG | + | chr3_2:86113383-86113402 | None:intergenic | 15.0% |
| !! | ATATACTGTACTAATTAATT+TGG | + | chr3_2:86113901-86113920 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTGAAGGAAG+TGG | - | chr3_2:86109960-86109979 | Msa0433650:CDS | 20.0% |
| !!! | TTTTTTTTTTTGAAGGAAGT+GGG | - | chr3_2:86109961-86109980 | Msa0433650:CDS | 20.0% |
| !! | TATTATGGTGTATGTTTAAA+AGG | - | chr3_2:86110057-86110076 | Msa0433650:CDS | 20.0% |
| !! | GTTATGATTTAAATCAATTG+TGG | - | chr3_2:86110085-86110104 | Msa0433650:CDS | 20.0% |
| !!! | TAGTTGTTTTGTTTATGTTT+TGG | - | chr3_2:86110196-86110215 | Msa0433650:CDS | 20.0% |
| !!! | TACTAAAAATTGATTCATTG+CGG | + | chr3_2:86110387-86110406 | None:intergenic | 20.0% |
| !! | GAACTTTCATTGATATTTAA+AGG | + | chr3_2:86110498-86110517 | None:intergenic | 20.0% |
| !! | AAATATAACCTTTCTACATT+CGG | - | chr3_2:86111023-86111042 | Msa0433650:CDS | 20.0% |
| !! | AAAAGCAAAATACAAACATA+AGG | + | chr3_2:86111318-86111337 | None:intergenic | 20.0% |
| !!! | CTAGTTTTAAGTAATATTTG+AGG | - | chr3_2:86111508-86111527 | Msa0433650:intron | 20.0% |
| !!! | CAAAAAATCGACTTTTAAAA+AGG | + | chr3_2:86111605-86111624 | None:intergenic | 20.0% |
| !!! | TTATTGGCTAACATTAATTT+CGG | + | chr3_2:86111717-86111736 | None:intergenic | 20.0% |
| !! | ATGTTATCACAAGATTTATA+TGG | + | chr3_2:86111953-86111972 | None:intergenic | 20.0% |
| !! | ACGGAAATAAAAATGAAATT+AGG | - | chr3_2:86111997-86112016 | Msa0433650:intron | 20.0% |
| !! | TGGATTGAATATAATATGTA+GGG | + | chr3_2:86112612-86112631 | None:intergenic | 20.0% |
| !! | TTGGATTGAATATAATATGT+AGG | + | chr3_2:86112613-86112632 | None:intergenic | 20.0% |
| !! | ATTATAATTACTATGCAGAT+TGG | - | chr3_2:86112957-86112976 | Msa0433650:intron | 20.0% |
| !! | AAAAAATACACACTAAAATC+AGG | - | chr3_2:86113604-86113623 | Msa0433650:intron | 20.0% |
| !! | GACAATAAAATATAGCATAA+GGG | + | chr3_2:86113684-86113703 | None:intergenic | 20.0% |
| !! | TGACAATAAAATATAGCATA+AGG | + | chr3_2:86113685-86113704 | None:intergenic | 20.0% |
| !!! | ATTAGTACAGTATATTTTAG+TGG | - | chr3_2:86113906-86113925 | Msa0433650:intron | 20.0% |
| !! | GTGTAATATTATATATAGTG+TGG | - | chr3_2:86114075-86114094 | Msa0433650:five_prime_UTR | 20.0% |
| !!! | AAATATTTCTCTTCAAGTTG+TGG | - | chr3_2:86109822-86109841 | Msa0433650:three_prime_UTR | 25.0% |
| !! | GTTTCTCCTTTATTTGTATT+AGG | - | chr3_2:86109882-86109901 | Msa0433650:exon | 25.0% |
| ! | CGATTTCCTAATACAAATAA+AGG | + | chr3_2:86109891-86109910 | None:intergenic | 25.0% |
| !!! | GTTTTGTTTATGTTTTGGTT+AGG | - | chr3_2:86110201-86110220 | Msa0433650:CDS | 25.0% |
| !! | ACTAAAAATTGATTCATTGC+GGG | + | chr3_2:86110386-86110405 | None:intergenic | 25.0% |
| !!! | AGAGTTTTTTTAAGCTTCAA+TGG | - | chr3_2:86110412-86110431 | Msa0433650:CDS | 25.0% |
| ! | TTATTATGCATTGCAATAGT+GGG | + | chr3_2:86110603-86110622 | None:intergenic | 25.0% |
| ! | TAGAAAAGAAGAAATGAGTA+CGG | + | chr3_2:86110690-86110709 | None:intergenic | 25.0% |
| !!! | TTTTGAAAAAACCGATAAAC+CGG | + | chr3_2:86110867-86110886 | None:intergenic | 25.0% |
| !!! | TATCGGTTTTTTCAAAAAAC+CGG | - | chr3_2:86110870-86110889 | Msa0433650:intron | 25.0% |
| !!! | TTTTGCATAGTTTTAAAACC+CGG | + | chr3_2:86111005-86111024 | None:intergenic | 25.0% |
| ! | AATATAACCTTTCTACATTC+GGG | - | chr3_2:86111024-86111043 | Msa0433650:CDS | 25.0% |
| !! | TTTTCCCGATTTCAAAATAT+GGG | + | chr3_2:86111106-86111125 | None:intergenic | 25.0% |
| !! | TTTTTCCCGATTTCAAAATA+TGG | + | chr3_2:86111107-86111126 | None:intergenic | 25.0% |
| ! | TGATGTAGTCTATTCATTAA+TGG | - | chr3_2:86111646-86111665 | Msa0433650:intron | 25.0% |
| !! | TATTGGCTAACATTAATTTC+GGG | + | chr3_2:86111716-86111735 | None:intergenic | 25.0% |
| ! | AAAATGCTAGATATCAAGAA+TGG | + | chr3_2:86111870-86111889 | None:intergenic | 25.0% |
| !! | ATATCTAGCATTTTCCTTAA+TGG | - | chr3_2:86111876-86111895 | Msa0433650:intron | 25.0% |
| ! | TAAATATTGTCACACCATTA+AGG | + | chr3_2:86111893-86111912 | None:intergenic | 25.0% |
| ! | AGTTAAAATGACTCCAAAAT+GGG | - | chr3_2:86111974-86111993 | Msa0433650:intron | 25.0% |
| !! | TTTCTTGAATTTGAAGTACA+CGG | + | chr3_2:86112227-86112246 | None:intergenic | 25.0% |
| ! | TATCAATTATCGTAAGCAAT+TGG | + | chr3_2:86112632-86112651 | None:intergenic | 25.0% |
| !!! | ATTTAATTTGCAGCTTGTAT+TGG | - | chr3_2:86112674-86112693 | Msa0433650:intron | 25.0% |
| !!! | TTTAAGTTCATTTTTGTTCC+AGG | + | chr3_2:86113292-86113311 | None:intergenic | 25.0% |
| ! | ACATTGAGTATCGTTAAAAC+GGG | + | chr3_2:86109765-86109784 | None:intergenic | 30.0% |
| ! | CACATTGAGTATCGTTAAAA+CGG | + | chr3_2:86109766-86109785 | None:intergenic | 30.0% |
| ATCGTTATTCTTGTTACTGT+AGG | - | chr3_2:86109907-86109926 | Msa0433650:CDS | 30.0% | |
| !!! | TTAGACCATTTTGATTGTCT+GGG | - | chr3_2:86110108-86110127 | Msa0433650:CDS | 30.0% |
| TTAAAATGAGCGCAAATTGT+TGG | + | chr3_2:86110457-86110476 | None:intergenic | 30.0% | |
| GTTATTATGCATTGCAATAG+TGG | + | chr3_2:86110604-86110623 | None:intergenic | 30.0% | |
| !!! | GTTTCAGTTTTAGAGATATG+TGG | + | chr3_2:86110648-86110667 | None:intergenic | 30.0% |
| ATTTAAGAAATTGCTTGACC+CGG | - | chr3_2:86110824-86110843 | Msa0433650:intron | 30.0% | |
| TGTAGTCTATTCATTAATGG+TGG | - | chr3_2:86111649-86111668 | Msa0433650:intron | 30.0% | |
| TGATGAATTCAAGAATGACA+TGG | + | chr3_2:86111840-86111859 | None:intergenic | 30.0% | |
| !! | TAGACATTATTTTGTTGGCT+TGG | - | chr3_2:86111914-86111933 | Msa0433650:intron | 30.0% |
| CAGTTAAAATGACTCCAAAA+TGG | - | chr3_2:86111973-86111992 | Msa0433650:intron | 30.0% | |
| !! | TTTTTATTTCCGTCCCATTT+TGG | + | chr3_2:86111990-86112009 | None:intergenic | 30.0% |
| ! | TTCTTGAATTTGAAGTACAC+GGG | + | chr3_2:86112226-86112245 | None:intergenic | 30.0% |
| AAGAATCATTGTTCGGATTA+TGG | + | chr3_2:86112425-86112444 | None:intergenic | 30.0% | |
| AACATTACATGTACTAACCA+GGG | + | chr3_2:86112791-86112810 | None:intergenic | 30.0% | |
| ! | ACATGTAATGTTCAAGTTCA+TGG | - | chr3_2:86112799-86112818 | Msa0433650:intron | 30.0% |
| TAATTACTATGCAGATTGGA+TGG | - | chr3_2:86112961-86112980 | Msa0433650:intron | 30.0% | |
| ! | GTTAACTTTTCGGATGAAAA+CGG | + | chr3_2:86113373-86113392 | None:intergenic | 30.0% |
| TATCATGAAGAATACCATTG+AGG | - | chr3_2:86113441-86113460 | Msa0433650:intron | 30.0% | |
| CAAAATGCTAAAATCAACCA+TGG | + | chr3_2:86113524-86113543 | None:intergenic | 30.0% | |
| !!! | GATTTTAGCATTTTGAAGCT+TGG | - | chr3_2:86113529-86113548 | Msa0433650:intron | 30.0% |
| ATTAATGAAGCTAACTGCAA+GGG | - | chr3_2:86113627-86113646 | Msa0433650:intron | 30.0% | |
| AAAGCAGTGCAAATTATTCA+AGG | + | chr3_2:86113952-86113971 | None:intergenic | 30.0% | |
| ACATACAACATAACACATCA+TGG | + | chr3_2:86114032-86114051 | None:intergenic | 30.0% | |
| TGTATTTGCAACCAAGCTTT+AGG | - | chr3_2:86109698-86109717 | Msa0433650:three_prime_UTR | 35.0% | |
| AGAAGAAGGTAGTTCATACT+GGG | + | chr3_2:86109741-86109760 | None:intergenic | 35.0% | |
| TAGAAGAAGGTAGTTCATAC+TGG | + | chr3_2:86109742-86109761 | None:intergenic | 35.0% | |
| GGTGTATGTTTAAAAGGCTT+TGG | - | chr3_2:86110063-86110082 | Msa0433650:CDS | 35.0% | |
| !!! | GTTAGACCATTTTGATTGTC+TGG | - | chr3_2:86110107-86110126 | Msa0433650:CDS | 35.0% |
| !! | ATGTTTTCCTCGTTGTTGTT+TGG | - | chr3_2:86110153-86110172 | Msa0433650:CDS | 35.0% |
| !! | TTTTGGTTAGGCATGACAAT+GGG | - | chr3_2:86110213-86110232 | Msa0433650:CDS | 35.0% |
| AGGGTAACGTGTAAGTATAT+GGG | + | chr3_2:86110284-86110303 | None:intergenic | 35.0% | |
| TAGGGTAACGTGTAAGTATA+TGG | + | chr3_2:86110285-86110304 | None:intergenic | 35.0% | |
| ! | AATTGATTCATTGCGGGTAT+GGG | + | chr3_2:86110380-86110399 | None:intergenic | 35.0% |
| ! | AAATTGATTCATTGCGGGTA+TGG | + | chr3_2:86110381-86110400 | None:intergenic | 35.0% |
| !!! | GTTTTAGAGATATGTGGTGT+GGG | + | chr3_2:86110642-86110661 | None:intergenic | 35.0% |
| !!! | AGTTTTAGAGATATGTGGTG+TGG | + | chr3_2:86110643-86110662 | None:intergenic | 35.0% |
| AAAAGAAGAAATGAGTACGG+CGG | + | chr3_2:86110687-86110706 | None:intergenic | 35.0% | |
| CGATTTCAAAATATGGGTAC+GGG | + | chr3_2:86111100-86111119 | None:intergenic | 35.0% | |
| CCGATTTCAAAATATGGGTA+CGG | + | chr3_2:86111101-86111120 | None:intergenic | 35.0% | |
| !!! | CCGTACCCATATTTTGAAAT+CGG | - | chr3_2:86111098-86111117 | Msa0433650:intron | 35.0% |
| !!! | CGTACCCATATTTTGAAATC+GGG | - | chr3_2:86111099-86111118 | Msa0433650:intron | 35.0% |
| ! | TTTGTTGCTATGCCTAGTTT+TGG | - | chr3_2:86111211-86111230 | Msa0433650:intron | 35.0% |
| !!! | TGCACATTTTTGTGTTGCTT+TGG | - | chr3_2:86111237-86111256 | Msa0433650:intron | 35.0% |
| AAAATGACTCCAAAATGGGA+CGG | - | chr3_2:86111978-86111997 | Msa0433650:intron | 35.0% | |
| ! | AGGATATCAGTTATGGCTTT+TGG | + | chr3_2:86112765-86112784 | None:intergenic | 35.0% |
| GAACATTACATGTACTAACC+AGG | + | chr3_2:86112792-86112811 | None:intergenic | 35.0% | |
| CAAGTTCATGGTTCATTCTA+TGG | - | chr3_2:86112811-86112830 | Msa0433650:intron | 35.0% | |
| CATGGTTCATTCTATGGTAA+AGG | - | chr3_2:86112817-86112836 | Msa0433650:intron | 35.0% | |
| ! | GAAGACAAAAGCACAAATGT+GGG | - | chr3_2:86112983-86113002 | Msa0433650:intron | 35.0% |
| !! | GTAAGTGTTGATACTGACAA+AGG | - | chr3_2:86113022-86113041 | Msa0433650:intron | 35.0% |
| ACATTCACTGAGTTTCCTTT+GGG | + | chr3_2:86113052-86113071 | None:intergenic | 35.0% | |
| AACATTCACTGAGTTTCCTT+TGG | + | chr3_2:86113053-86113072 | None:intergenic | 35.0% | |
| AAAGGAAACTCAGTGAATGT+TGG | - | chr3_2:86113052-86113071 | Msa0433650:intron | 35.0% | |
| AACTCAGTGAATGTTGGAAA+AGG | - | chr3_2:86113058-86113077 | Msa0433650:intron | 35.0% | |
| ATCATGTAATTGAGTCTCAG+TGG | + | chr3_2:86113227-86113246 | None:intergenic | 35.0% | |
| AGAAGAATAATGCTGCTCTA+GGG | + | chr3_2:86113252-86113271 | None:intergenic | 35.0% | |
| AAGAAGAATAATGCTGCTCT+AGG | + | chr3_2:86113253-86113272 | None:intergenic | 35.0% | |
| TAGAGCAGCATTATTCTTCT+TGG | - | chr3_2:86113252-86113271 | Msa0433650:intron | 35.0% | |
| !! | GAAGCTTGGAAAAAGTGTTA+AGG | - | chr3_2:86113543-86113562 | Msa0433650:intron | 35.0% |
| AAGTGTTAAGGTTGTGTCTA+CGG | - | chr3_2:86113555-86113574 | Msa0433650:intron | 35.0% | |
| GATTAATGAAGCTAACTGCA+AGG | - | chr3_2:86113626-86113645 | Msa0433650:intron | 35.0% | |
| AAGAGCTTATTCTGTTCCTT+TGG | - | chr3_2:86113720-86113739 | Msa0433650:intron | 35.0% | |
| !!! | TCCATTTTGAAGTATCTGTG+TGG | + | chr3_2:86113786-86113805 | None:intergenic | 35.0% |
| ! | ACTTGAAAAGCAAGGTGTTT+GGG | + | chr3_2:86113811-86113830 | None:intergenic | 35.0% |
| !! | TTTTGAGGACTTGAAAAGCA+AGG | + | chr3_2:86113819-86113838 | None:intergenic | 35.0% |
| AATTAAGCCAGGAACACTTT+CGG | - | chr3_2:86113837-86113856 | Msa0433650:intron | 35.0% | |
| AGTGCAAATTATTCAAGGAC+GGG | + | chr3_2:86113947-86113966 | None:intergenic | 35.0% | |
| CAGTGCAAATTATTCAAGGA+CGG | + | chr3_2:86113948-86113967 | None:intergenic | 35.0% | |
| TAAAGCTGGAACCTAAAGCT+TGG | + | chr3_2:86109712-86109731 | None:intergenic | 40.0% | |
| !! | ATACTGGGAAGCTTTAAAGC+TGG | + | chr3_2:86109726-86109745 | None:intergenic | 40.0% |
| TCGTTAAAACGGGTAGAAGA+AGG | + | chr3_2:86109755-86109774 | None:intergenic | 40.0% | |
| AGGCTATATAGCTAGAGAAG+TGG | - | chr3_2:86109927-86109946 | Msa0433650:CDS | 40.0% | |
| GGCTATATAGCTAGAGAAGT+GGG | - | chr3_2:86109928-86109947 | Msa0433650:CDS | 40.0% | |
| CAACACCCAGACAATCAAAA+TGG | + | chr3_2:86110116-86110135 | None:intergenic | 40.0% | |
| !! | TTTTGATTGTCTGGGTGTTG+AGG | - | chr3_2:86110116-86110135 | Msa0433650:CDS | 40.0% |
| !! | TTCCTCGTTGTTGTTTGGTT+TGG | - | chr3_2:86110158-86110177 | Msa0433650:CDS | 40.0% |
| !!! | GTTTTGGTTAGGCATGACAA+TGG | - | chr3_2:86110212-86110231 | Msa0433650:CDS | 40.0% |
| TTTGGTTAGGCATGACAATG+GGG | - | chr3_2:86110214-86110233 | Msa0433650:CDS | 40.0% | |
| GTGTAAGTATATGGGAGTAG+GGG | + | chr3_2:86110276-86110295 | None:intergenic | 40.0% | |
| CGTGTAAGTATATGGGAGTA+GGG | + | chr3_2:86110277-86110296 | None:intergenic | 40.0% | |
| ACGTGTAAGTATATGGGAGT+AGG | + | chr3_2:86110278-86110297 | None:intergenic | 40.0% | |
| ATTCAATTTCTCATCCCCGT+TGG | + | chr3_2:86110315-86110334 | None:intergenic | 40.0% | |
| GGAAATACCCAAAACCATTG+GGG | + | chr3_2:86110349-86110368 | None:intergenic | 40.0% | |
| CGGAAATACCCAAAACCATT+GGG | + | chr3_2:86110350-86110369 | None:intergenic | 40.0% | |
| ! | ATTGATTCATTGCGGGTATG+GGG | + | chr3_2:86110379-86110398 | None:intergenic | 40.0% |
| GTGTGGGTGATTCATAACTA+GGG | + | chr3_2:86110626-86110645 | None:intergenic | 40.0% | |
| TGAAAAAACCGATAAACCGG+CGG | + | chr3_2:86110864-86110883 | None:intergenic | 40.0% | |
| !!! | CATAGTTTTAAAACCCGGCT+CGG | + | chr3_2:86111000-86111019 | None:intergenic | 40.0% |
| TTCAAAATATGGGTACGGGA+CGG | + | chr3_2:86111096-86111115 | None:intergenic | 40.0% | |
| ATTTGACTGGGTTTGGGTAT+GGG | + | chr3_2:86111136-86111155 | None:intergenic | 40.0% | |
| ATACCCAAACCCAGTCAAAT+CGG | - | chr3_2:86111136-86111155 | Msa0433650:intron | 40.0% | |
| AAATGTGCACCACCAAAACT+AGG | + | chr3_2:86111226-86111245 | None:intergenic | 40.0% | |
| !! | TTTGGTCTTGACTCTGTGAT+GGG | - | chr3_2:86111255-86111274 | Msa0433650:intron | 40.0% |
| TAGCCAATAAAATCTCAGCC+TGG | - | chr3_2:86111727-86111746 | Msa0433650:intron | 40.0% | |
| ! | ATCGACTTCCAGTAAAGTTC+AGG | + | chr3_2:86112723-86112742 | None:intergenic | 40.0% |
| ! | TCAGTTATGGCTTTTGGCAT+TGG | + | chr3_2:86112759-86112778 | None:intergenic | 40.0% |
| ATTACATGTACTAACCAGGG+TGG | + | chr3_2:86112788-86112807 | None:intergenic | 40.0% | |
| ! | GGAAGACAAAAGCACAAATG+TGG | - | chr3_2:86112982-86113001 | Msa0433650:intron | 40.0% |
| ! | AAAAGCACAAATGTGGGTGT+AGG | - | chr3_2:86112989-86113008 | Msa0433650:intron | 40.0% |
| AAAGCACAAATGTGGGTGTA+GGG | - | chr3_2:86112990-86113009 | Msa0433650:intron | 40.0% | |
| ACTGACAAAGGAAAACCCAA+AGG | - | chr3_2:86113034-86113053 | Msa0433650:intron | 40.0% | |
| TCAGTGAATGTTGGAAAAGG+AGG | - | chr3_2:86113061-86113080 | Msa0433650:intron | 40.0% | |
| AAATGCAGGCCATAAGAGAA+AGG | - | chr3_2:86113144-86113163 | Msa0433650:intron | 40.0% | |
| AATGCAGGCCATAAGAGAAA+GGG | - | chr3_2:86113145-86113164 | Msa0433650:intron | 40.0% | |
| AAACCTGCAACTGTTGTAGT+TGG | - | chr3_2:86113169-86113188 | Msa0433650:intron | 40.0% | |
| GCAGCATAGTTGTAAGCAAA+AGG | + | chr3_2:86113205-86113224 | None:intergenic | 40.0% | |
| TTGGAAAAAGACTTGCATCC+TGG | - | chr3_2:86113271-86113290 | Msa0433650:intron | 40.0% | |
| TGTGAAGATGCAAGCATTCA+AGG | - | chr3_2:86113466-86113485 | Msa0433650:intron | 40.0% | |
| ATCAACCATGGATTCTAGTG+AGG | + | chr3_2:86113512-86113531 | None:intergenic | 40.0% | |
| AGCTTATTCTGTTCCTTTGG+AGG | - | chr3_2:86113723-86113742 | Msa0433650:intron | 40.0% | |
| ! | TTCCTTTGGAGGCTGATAAT+GGG | - | chr3_2:86113734-86113753 | Msa0433650:intron | 40.0% |
| GACTAGAGTTAAAGCTGTAG+TGG | - | chr3_2:86113756-86113775 | Msa0433650:intron | 40.0% | |
| GCCACACAGATACTTCAAAA+TGG | - | chr3_2:86113782-86113801 | Msa0433650:intron | 40.0% | |
| ! | CTTGAAAAGCAAGGTGTTTG+GGG | + | chr3_2:86113810-86113829 | None:intergenic | 40.0% |
| ! | GACTTGAAAAGCAAGGTGTT+TGG | + | chr3_2:86113812-86113831 | None:intergenic | 40.0% |
| CAAGTCCTCAAAATTAAGCC+AGG | - | chr3_2:86113826-86113845 | Msa0433650:intron | 40.0% | |
| ! | GTGTTCCTGGCTTAATTTTG+AGG | + | chr3_2:86113834-86113853 | None:intergenic | 40.0% |
| TTCCTGAGGATCACATTGTT+TGG | - | chr3_2:86113872-86113891 | Msa0433650:intron | 40.0% | |
| TCCTGAGGATCACATTGTTT+GGG | - | chr3_2:86113873-86113892 | Msa0433650:intron | 40.0% | |
| TTATTCAAGGACGGGGTAAA+AGG | + | chr3_2:86113939-86113958 | None:intergenic | 40.0% | |
| GTGCAAATTATTCAAGGACG+GGG | + | chr3_2:86113946-86113965 | None:intergenic | 40.0% | |
| ! | AGGAAGTGGGCAGTATCTTT+TGG | - | chr3_2:86109974-86109993 | Msa0433650:CDS | 45.0% |
| CACCAAACCAAACAACAACG+AGG | + | chr3_2:86110163-86110182 | None:intergenic | 45.0% | |
| !! | CTCGTTGTTGTTTGGTTTGG+TGG | - | chr3_2:86110161-86110180 | Msa0433650:CDS | 45.0% |
| GTTACCCTACCCATATCCAA+CGG | - | chr3_2:86110296-86110315 | Msa0433650:CDS | 45.0% | |
| TTACCCTACCCATATCCAAC+GGG | - | chr3_2:86110297-86110316 | Msa0433650:CDS | 45.0% | |
| TTCTCATCCCCGTTGGATAT+GGG | + | chr3_2:86110308-86110327 | None:intergenic | 45.0% | |
| TTTCTCATCCCCGTTGGATA+TGG | + | chr3_2:86110309-86110328 | None:intergenic | 45.0% | |
| ATACCCAAAACCATTGGGGA+CGG | + | chr3_2:86110345-86110364 | None:intergenic | 45.0% | |
| GCGGAAATACCCAAAACCAT+TGG | + | chr3_2:86110351-86110370 | None:intergenic | 45.0% | |
| !! | TGCATTGCAATAGTGGGCTT+GGG | + | chr3_2:86110597-86110616 | None:intergenic | 45.0% |
| !! | ATGCATTGCAATAGTGGGCT+TGG | + | chr3_2:86110598-86110617 | None:intergenic | 45.0% |
| GGTGTGGGTGATTCATAACT+AGG | + | chr3_2:86110627-86110646 | None:intergenic | 45.0% | |
| !! | TTGAGTAACCGCCGGTTTAT+CGG | - | chr3_2:86110853-86110872 | Msa0433650:intron | 45.0% |
| AAAAAACCGGTCGAGTCAAC+CGG | - | chr3_2:86110883-86110902 | Msa0433650:intron | 45.0% | |
| GATCGGTTATGCAGTTGACT+CGG | + | chr3_2:86110915-86110934 | None:intergenic | 45.0% | |
| GTTCGGGTCTCAAATTGGAT+CGG | + | chr3_2:86110932-86110951 | None:intergenic | 45.0% | |
| ! | ATCCAATTTGAGACCCGAAC+CGG | - | chr3_2:86110932-86110951 | Msa0433650:intron | 45.0% |
| AACGCTACCCGAATGTAGAA+AGG | + | chr3_2:86111034-86111053 | None:intergenic | 45.0% | |
| TTCTACATTCGGGTAGCGTT+TGG | - | chr3_2:86111034-86111053 | Msa0433650:CDS | 45.0% | |
| TCTACATTCGGGTAGCGTTT+GGG | - | chr3_2:86111035-86111054 | Msa0433650:CDS | 45.0% | |
| TCAAAATATGGGTACGGGAC+GGG | + | chr3_2:86111095-86111114 | None:intergenic | 45.0% | |
| GATTTGACTGGGTTTGGGTA+TGG | + | chr3_2:86111137-86111156 | None:intergenic | 45.0% | |
| TACCCAAACCCAGTCAAATC+GGG | - | chr3_2:86111137-86111156 | Msa0433650:intron | 45.0% | |
| !! | GGATTTTCCCCGATTTGACT+GGG | + | chr3_2:86111148-86111167 | None:intergenic | 45.0% |
| AAAATCCGTCAAATCCGGGT+TGG | - | chr3_2:86111161-86111180 | Msa0433650:intron | 45.0% | |
| !!! | GTTGCTATGCCTAGTTTTGG+TGG | - | chr3_2:86111214-86111233 | Msa0433650:intron | 45.0% |
| !! | CTTTGGTCTTGACTCTGTGA+TGG | - | chr3_2:86111254-86111273 | Msa0433650:intron | 45.0% |
| CAATAAAATCTCAGCCTGGC+CGG | - | chr3_2:86111731-86111750 | Msa0433650:intron | 45.0% | |
| CTCTACCTCCTGAACTTTAC+TGG | - | chr3_2:86112712-86112731 | Msa0433650:intron | 45.0% | |
| GACTTCCAGTAAAGTTCAGG+AGG | + | chr3_2:86112720-86112739 | None:intergenic | 45.0% | |
| AGGGTGGAGGATATCAGTTA+TGG | + | chr3_2:86112772-86112791 | None:intergenic | 45.0% | |
| ATAACTGATATCCTCCACCC+TGG | - | chr3_2:86112771-86112790 | Msa0433650:intron | 45.0% | |
| ACAAATGTGGGTGTAGGGAA+AGG | - | chr3_2:86112995-86113014 | Msa0433650:intron | 45.0% | |
| GTAAATGTCCATGCAGGAAG+AGG | - | chr3_2:86113085-86113104 | Msa0433650:intron | 45.0% | |
| !! | AGAGGTGCTAATGTCAACGT+TGG | - | chr3_2:86113103-86113122 | Msa0433650:intron | 45.0% |
| GGAGGAGTTTCTGTAAATGC+AGG | - | chr3_2:86113130-86113149 | Msa0433650:intron | 45.0% | |
| ATGCAGGCCATAAGAGAAAG+GGG | - | chr3_2:86113146-86113165 | Msa0433650:intron | 45.0% | |
| CAGGTTTCCCCTTTCTCTTA+TGG | + | chr3_2:86113156-86113175 | None:intergenic | 45.0% | |
| TTGTAAGCAAAAGGCGAGTG+TGG | + | chr3_2:86113196-86113215 | None:intergenic | 45.0% | |
| AACTTGTCGAGGCAAGAATG+CGG | + | chr3_2:86113338-86113357 | None:intergenic | 45.0% | |
| TGCATCTTCACACTCCTCAA+TGG | + | chr3_2:86113458-86113477 | None:intergenic | 45.0% | |
| TGCAACCTCACTAGAATCCA+TGG | - | chr3_2:86113504-86113523 | Msa0433650:intron | 45.0% | |
| TGTTAAGGTTGTGTCTACGG+TGG | - | chr3_2:86113558-86113577 | Msa0433650:intron | 45.0% | |
| ! | TGGTAGACAACAAGAGTGCA+GGG | - | chr3_2:86113578-86113597 | Msa0433650:intron | 45.0% |
| GAAGCTAACTGCAAGGGATA+AGG | - | chr3_2:86113633-86113652 | Msa0433650:intron | 45.0% | |
| ! | GTTCCTTTGGAGGCTGATAA+TGG | - | chr3_2:86113733-86113752 | Msa0433650:intron | 45.0% |
| TGTGATCCTCAGGAAGAAAG+TGG | + | chr3_2:86113867-86113886 | None:intergenic | 45.0% | |
| ACCCAAACAATGTGATCCTC+AGG | + | chr3_2:86113877-86113896 | None:intergenic | 45.0% | |
| !!! | TATATTATAAACTAATATTT+TGG | + | chr3_2:86112024-86112043 | None:intergenic | 5.0% |
| !!! | AATATTAGTTTATAATATAT+AGG | - | chr3_2:86112025-86112044 | Msa0433650:intron | 5.0% |
| !!! | ATATTAGTTTATAATATATA+GGG | - | chr3_2:86112026-86112045 | Msa0433650:intron | 5.0% |
| !! | CAAAAAAAATAATAAAAAAT+TGG | + | chr3_2:86112055-86112074 | None:intergenic | 5.0% |
| !!! | CTGGGTGTTGAGGAGTGTTT+TGG | - | chr3_2:86110126-86110145 | Msa0433650:CDS | 50.0% |
| GTTAGGCATGACAATGGGGT+GGG | - | chr3_2:86110218-86110237 | Msa0433650:CDS | 50.0% | |
| GTATATGGGAGTAGGGGATG+AGG | + | chr3_2:86110270-86110289 | None:intergenic | 50.0% | |
| TACCCTACCCATATCCAACG+GGG | - | chr3_2:86110298-86110317 | Msa0433650:CDS | 50.0% | |
| ATCCCCGTTGGATATGGGTA+GGG | + | chr3_2:86110303-86110322 | None:intergenic | 50.0% | |
| TACCCAAAACCATTGGGGAC+GGG | + | chr3_2:86110344-86110363 | None:intergenic | 50.0% | |
| TTCATTGCGGGTATGGGGAT+GGG | + | chr3_2:86110374-86110393 | None:intergenic | 50.0% | |
| ATTCATTGCGGGTATGGGGA+TGG | + | chr3_2:86110375-86110394 | None:intergenic | 50.0% | |
| AAACCGGCGGTTACTCAACT+CGG | + | chr3_2:86110851-86110870 | None:intergenic | 50.0% | |
| !! | AACCGGTTCGGGTCTCAAAT+TGG | + | chr3_2:86110937-86110956 | None:intergenic | 50.0% |
| AACCGGTGGTATAACCGGTT+CGG | + | chr3_2:86110949-86110968 | None:intergenic | 50.0% | |
| !!! | TTTTAAAACCCGGCTCGGAC+CGG | + | chr3_2:86110995-86111014 | None:intergenic | 50.0% |
| ATTCGGGTAGCGTTTGGGTA+TGG | - | chr3_2:86111040-86111059 | Msa0433650:CDS | 50.0% | |
| TTCGGGTAGCGTTTGGGTAT+GGG | - | chr3_2:86111041-86111060 | Msa0433650:CDS | 50.0% | |
| GTAGCGTTTGGGTATGGGTT+CGG | - | chr3_2:86111046-86111065 | Msa0433650:CDS | 50.0% | |
| TAGCGTTTGGGTATGGGTTC+GGG | - | chr3_2:86111047-86111066 | Msa0433650:CDS | 50.0% | |
| CTGGGTTTGGGTATGGGTTT+GGG | + | chr3_2:86111130-86111149 | None:intergenic | 50.0% | |
| ACTGGGTTTGGGTATGGGTT+TGG | + | chr3_2:86111131-86111150 | None:intergenic | 50.0% | |
| ACCCAAACCCAGTCAAATCG+GGG | - | chr3_2:86111138-86111157 | Msa0433650:intron | 50.0% | |
| ! | TCCCCGATTTGACTGGGTTT+GGG | + | chr3_2:86111142-86111161 | None:intergenic | 50.0% |
| ! | TTCCCCGATTTGACTGGGTT+TGG | + | chr3_2:86111143-86111162 | None:intergenic | 50.0% |
| !! | CGGATTTTCCCCGATTTGAC+TGG | + | chr3_2:86111149-86111168 | None:intergenic | 50.0% |
| CGGGGAAAATCCGTCAAATC+CGG | - | chr3_2:86111156-86111175 | Msa0433650:intron | 50.0% | |
| GGGGAAAATCCGTCAAATCC+GGG | - | chr3_2:86111157-86111176 | Msa0433650:intron | 50.0% | |
| CCAAACCAACCCGGATTTGA+CGG | + | chr3_2:86111169-86111188 | None:intergenic | 50.0% | |
| !! | CAAATCCGGGTTGGTTTGGA+CGG | - | chr3_2:86111170-86111189 | Msa0433650:intron | 50.0% |
| !! | AAATCCGGGTTGGTTTGGAC+GGG | - | chr3_2:86111171-86111190 | Msa0433650:intron | 50.0% |
| ! | CGGCCAGGCTGAGATTTTAT+TGG | + | chr3_2:86111733-86111752 | None:intergenic | 50.0% |
| !!! | TATGGCTTTTGGCATTGGCG+TGG | + | chr3_2:86112754-86112773 | None:intergenic | 50.0% |
| ACATGTACTAACCAGGGTGG+AGG | + | chr3_2:86112785-86112804 | None:intergenic | 50.0% | |
| AATGTGGGTGTAGGGAAAGG+TGG | - | chr3_2:86112998-86113017 | Msa0433650:intron | 50.0% | |
| ! | GGAGGTGTAAATGTCCATGC+AGG | - | chr3_2:86113079-86113098 | Msa0433650:intron | 50.0% |
| CATTAGCACCTCTTCCTGCA+TGG | + | chr3_2:86113096-86113115 | None:intergenic | 50.0% | |
| GGTGCTAATGTCAACGTTGG+TGG | - | chr3_2:86113106-86113125 | Msa0433650:intron | 50.0% | |
| ! | GCTAATGTCAACGTTGGTGG+TGG | - | chr3_2:86113109-86113128 | Msa0433650:intron | 50.0% |
| !! | AATGTCAACGTTGGTGGTGG+AGG | - | chr3_2:86113112-86113131 | Msa0433650:intron | 50.0% |
| GGACCAACTACAACAGTTGC+AGG | + | chr3_2:86113175-86113194 | None:intergenic | 50.0% | |
| TTCCGTCAAACCTGAGTCAG+AGG | - | chr3_2:86113411-86113430 | Msa0433650:intron | 50.0% | |
| CTCCTCTGACTCAGGTTTGA+CGG | + | chr3_2:86113416-86113435 | None:intergenic | 50.0% | |
| ATATGAGCCTCCTCTGACTC+AGG | + | chr3_2:86113424-86113443 | None:intergenic | 50.0% | |
| AGATGCAAGCATTCAAGGCG+AGG | - | chr3_2:86113471-86113490 | Msa0433650:intron | 50.0% | |
| ! | GTGGTAGACAACAAGAGTGC+AGG | - | chr3_2:86113577-86113596 | Msa0433650:intron | 50.0% |
| GTCCCATTATCAGCCTCCAA+AGG | + | chr3_2:86113739-86113758 | None:intergenic | 50.0% | |
| GGTTAGGCATGACAATGGGG+TGG | - | chr3_2:86110217-86110236 | Msa0433650:CDS | 55.0% | |
| GCATGACAATGGGGTGGGAT+GGG | - | chr3_2:86110223-86110242 | Msa0433650:CDS | 55.0% | |
| CATGACAATGGGGTGGGATG+GGG | - | chr3_2:86110224-86110243 | Msa0433650:CDS | 55.0% | |
| TGGGAGTAGGGGATGAGGAT+GGG | + | chr3_2:86110265-86110284 | None:intergenic | 55.0% | |
| ATGGGAGTAGGGGATGAGGA+TGG | + | chr3_2:86110266-86110285 | None:intergenic | 55.0% | |
| CATCCCCGTTGGATATGGGT+AGG | + | chr3_2:86110304-86110323 | None:intergenic | 55.0% | |
| AATCTCATCCCCGTCCCCAA+TGG | - | chr3_2:86110332-86110351 | Msa0433650:CDS | 55.0% | |
| ! | ATCCCCGTCCCCAATGGTTT+TGG | - | chr3_2:86110338-86110357 | Msa0433650:CDS | 55.0% |
| ! | TCCCCGTCCCCAATGGTTTT+GGG | - | chr3_2:86110339-86110358 | Msa0433650:CDS | 55.0% |
| ACCCAAAACCATTGGGGACG+GGG | + | chr3_2:86110343-86110362 | None:intergenic | 55.0% | |
| TCATTGCGGGTATGGGGATG+GGG | + | chr3_2:86110373-86110392 | None:intergenic | 55.0% | |
| ACCCGAACCGGTTATACCAC+CGG | - | chr3_2:86110944-86110963 | Msa0433650:intron | 55.0% | |
| ! | ACCGGTGGTATAACCGGTTC+GGG | + | chr3_2:86110948-86110967 | None:intergenic | 55.0% |
| CCGTGAACCGGTGGTATAAC+CGG | + | chr3_2:86110954-86110973 | None:intergenic | 55.0% | |
| !! | CCGGTTATACCACCGGTTCA+CGG | - | chr3_2:86110951-86110970 | Msa0433650:intron | 55.0% |
| AGCGTTTGGGTATGGGTTCG+GGG | - | chr3_2:86111048-86111067 | Msa0433650:CDS | 55.0% | |
| TATGGGTACGGGACGGGTAA+CGG | + | chr3_2:86111089-86111108 | None:intergenic | 55.0% | |
| !! | CCGTCAAATCCGGGTTGGTT+TGG | - | chr3_2:86111166-86111185 | Msa0433650:intron | 55.0% |
| !! | TTGGTTTGGACGGGTACCCA+TGG | - | chr3_2:86111180-86111199 | Msa0433650:intron | 55.0% |
| ! | TGGTTTGGACGGGTACCCAT+GGG | - | chr3_2:86111181-86111200 | Msa0433650:intron | 55.0% |
| GCAACAAAACCCGTGCCCAT+GGG | + | chr3_2:86111199-86111218 | None:intergenic | 55.0% | |
| AGCAACAAAACCCGTGCCCA+TGG | + | chr3_2:86111200-86111219 | None:intergenic | 55.0% | |
| TCAGCCTGGCCGGAAATCAT+GGG | - | chr3_2:86111741-86111760 | Msa0433650:intron | 55.0% | |
| ACCCACCACCCCATGATTTC+CGG | + | chr3_2:86111753-86111772 | None:intergenic | 55.0% | |
| !!! | GCTTTTGGCATTGGCGTGGT+AGG | + | chr3_2:86112750-86112769 | None:intergenic | 55.0% |
| GTTGCAGACGCAACTTGTCG+AGG | + | chr3_2:86113349-86113368 | None:intergenic | 55.0% | |
| CGTCAAACCTGAGTCAGAGG+AGG | - | chr3_2:86113414-86113433 | Msa0433650:intron | 55.0% | |
| !! | TGGCAGACCGAAAGTGTTCC+TGG | + | chr3_2:86113847-86113866 | None:intergenic | 55.0% |
| !! | GGTCTGCCACTTTCTTCCTG+AGG | - | chr3_2:86113858-86113877 | Msa0433650:intron | 55.0% |
| GGCATGACAATGGGGTGGGA+TGG | - | chr3_2:86110222-86110241 | Msa0433650:CDS | 60.0% | |
| ACAATGGGGTGGGATGGGGA+CGG | - | chr3_2:86110228-86110247 | Msa0433650:CDS | 60.0% | |
| GTAGGGGATGAGGATGGGGA+AGG | + | chr3_2:86110260-86110279 | None:intergenic | 60.0% | |
| GGGAGTAGGGGATGAGGATG+GGG | + | chr3_2:86110264-86110283 | None:intergenic | 60.0% | |
| GCGGTTACTCAACTCGGACC+GGG | + | chr3_2:86110845-86110864 | None:intergenic | 60.0% | |
| GGCGGTTACTCAACTCGGAC+CGG | + | chr3_2:86110846-86110865 | None:intergenic | 60.0% | |
| ! | GGTCCGAGTTGAGTAACCGC+CGG | - | chr3_2:86110845-86110864 | Msa0433650:intron | 60.0% |
| !! | CGTGAACCGGTTGACTCGAC+CGG | + | chr3_2:86110892-86110911 | None:intergenic | 60.0% |
| !! | GCAGTTGACTCGGCGTGAAC+CGG | + | chr3_2:86110905-86110924 | None:intergenic | 60.0% |
| GTTTGGGTATGGGTTCGGGG+TGG | - | chr3_2:86111051-86111070 | Msa0433650:CDS | 60.0% | |
| ATGGGTACGGGACGGGTAAC+GGG | + | chr3_2:86111088-86111107 | None:intergenic | 60.0% | |
| GGTACCCGTCCAAACCAACC+CGG | + | chr3_2:86111178-86111197 | None:intergenic | 60.0% | |
| CTCAGCCTGGCCGGAAATCA+TGG | - | chr3_2:86111740-86111759 | Msa0433650:intron | 60.0% | |
| CAGCCTGGCCGGAAATCATG+GGG | - | chr3_2:86111742-86111761 | Msa0433650:intron | 60.0% | |
| GCCGGAAATCATGGGGTGGT+GGG | - | chr3_2:86111749-86111768 | Msa0433650:intron | 60.0% | |
| CAATGGGGTGGGATGGGGAC+GGG | - | chr3_2:86110229-86110248 | Msa0433650:CDS | 65.0% | |
| TTGCGGGTATGGGGATGGGG+CGG | + | chr3_2:86110370-86110389 | None:intergenic | 65.0% | |
| !! | CCACCGGTTCACGGTCCAAC+CGG | - | chr3_2:86110960-86110979 | Msa0433650:intron | 65.0% |
| CGACCGGTTGGACCGTGAAC+CGG | + | chr3_2:86110966-86110985 | None:intergenic | 65.0% | |
| CGGTTCACGGTCCAACCGGT+CGG | - | chr3_2:86110964-86110983 | Msa0433650:intron | 65.0% | |
| TGGGTACGGGACGGGTAACG+GGG | + | chr3_2:86111087-86111106 | None:intergenic | 65.0% | |
| TGGACGGGTACCCATGGGCA+CGG | - | chr3_2:86111186-86111205 | Msa0433650:intron | 65.0% | |
| CCACCCCATGATTTCCGGCC+AGG | + | chr3_2:86111748-86111767 | None:intergenic | 65.0% | |
| CCTGGCCGGAAATCATGGGG+TGG | - | chr3_2:86111745-86111764 | Msa0433650:intron | 65.0% | |
| GGCCGGAAATCATGGGGTGG+TGG | - | chr3_2:86111748-86111767 | Msa0433650:intron | 65.0% | |
| CCGGTTGGACCGTGAACCGG+TGG | + | chr3_2:86110963-86110982 | None:intergenic | 70.0% | |
| CACGGTCCAACCGGTCGGAC+CGG | - | chr3_2:86110969-86110988 | Msa0433650:intron | 70.0% | |
| !! | AAAACCCGGCTCGGACCGGC+CGG | + | chr3_2:86110991-86111010 | None:intergenic | 70.0% |
| GGACGGGTACCCATGGGCAC+GGG | - | chr3_2:86111187-86111206 | Msa0433650:intron | 70.0% | |
| GTCCAACCGGTCGGACCGGC+CGG | - | chr3_2:86110973-86110992 | Msa0433650:intron | 75.0% | |
| ! | GACCGGCCGGTCCGACCGGT+TGG | + | chr3_2:86110978-86110997 | None:intergenic | 80.0% |
| ! | CTCGGACCGGCCGGTCCGAC+CGG | + | chr3_2:86110982-86111001 | None:intergenic | 80.0% |
| ! | TCGGACCGGCCGGTCCGAGC+CGG | - | chr3_2:86110983-86111002 | Msa0433650:intron | 80.0% |
| ! | CGGACCGGCCGGTCCGAGCC+GGG | - | chr3_2:86110984-86111003 | Msa0433650:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 86109696 | 86114104 | 86109696 | ID=Msa0433650;Name=Msa0433650 |
| chr3_2 | mRNA | 86109696 | 86114104 | 86109696 | ID=Msa0433650-mRNA-1;Parent=Msa0433650;Name=Msa0433650-mRNA-1;_AED=0.03;_eAED=0.03;_QI=48|1|1|1|0.5|0.66|3|198|358 |
| chr3_2 | exon | 86109696 | 86110825 | 86109696 | ID=Msa0433650-mRNA-1:exon:24840;Parent=Msa0433650-mRNA-1 |
| chr3_2 | exon | 86111008 | 86111113 | 86111008 | ID=Msa0433650-mRNA-1:exon:24839;Parent=Msa0433650-mRNA-1 |
| chr3_2 | exon | 86114018 | 86114104 | 86114018 | ID=Msa0433650-mRNA-1:exon:24838;Parent=Msa0433650-mRNA-1 |
| chr3_2 | five_prime_UTR | 86114057 | 86114104 | 86114057 | ID=Msa0433650-mRNA-1:five_prime_utr;Parent=Msa0433650-mRNA-1 |
| chr3_2 | CDS | 86114018 | 86114056 | 86114018 | ID=Msa0433650-mRNA-1:cds;Parent=Msa0433650-mRNA-1 |
| chr3_2 | CDS | 86111008 | 86111113 | 86111008 | ID=Msa0433650-mRNA-1:cds;Parent=Msa0433650-mRNA-1 |
| chr3_2 | CDS | 86109894 | 86110825 | 86109894 | ID=Msa0433650-mRNA-1:cds;Parent=Msa0433650-mRNA-1 |
| chr3_2 | three_prime_UTR | 86109696 | 86109893 | 86109696 | ID=Msa0433650-mRNA-1:three_prime_utr;Parent=Msa0433650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
