Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0554320 | XP_024638413.1 | 91.489 | 564 | 13 | 1 | 1 | 564 | 1 | 529 | 0.0 | 1063 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0554320 | sp|F4IVI0|BUB1_ARATH | 56.295 | 556 | 205 | 3 | 12 | 564 | 5 | 525 | 0.0 | 648 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0554320 | A0A396IAH4 | 91.489 | 564 | 13 | 1 | 1 | 564 | 1 | 529 | 0.0 | 1063 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0159620 | Msa0554320 | 0.804068 | 2.579455e-49 | -8.615850e-47 |
| Msa0433760 | Msa0554320 | 0.818859 | 1.573258e-52 | -8.615850e-47 |
| Msa0456670 | Msa0554320 | 0.803819 | 2.905536e-49 | -8.615850e-47 |
| Msa0477630 | Msa0554320 | 0.823437 | 1.386024e-53 | -8.615850e-47 |
| Msa0521680 | Msa0554320 | 0.809880 | 1.520118e-50 | -8.615850e-47 |
| Msa0554300 | Msa0554320 | 0.812783 | 3.563737e-51 | -8.615850e-47 |
| Msa0554320 | Msa0615630 | 0.801106 | 1.053048e-48 | -8.615850e-47 |
| Msa0554320 | Msa0620500 | 0.801577 | 8.433445e-49 | -8.615850e-47 |
| Msa0554320 | Msa0714520 | 0.802198 | 6.286008e-49 | -8.615850e-47 |
| Msa0554320 | Msa1008670 | 0.805009 | 1.641352e-49 | -8.615850e-47 |
| Msa0554320 | Msa1076020 | 0.810154 | 1.327070e-50 | -8.615850e-47 |
| Msa0554320 | Msa1148630 | 0.806649 | 7.423800e-50 | -8.615850e-47 |
| Msa0554320 | Msa1190390 | 0.802980 | 4.336998e-49 | -8.615850e-47 |
| Msa0554320 | Msa1215980 | 0.801989 | 6.939825e-49 | -8.615850e-47 |
| Msa0554320 | Msa1294790 | 0.810086 | 1.372840e-50 | -8.615850e-47 |
| Msa0554320 | Msa1381470 | 0.813783 | 2.149581e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0554320 | MtrunA17_Chr4g0040351 | 91.489 | 564 | 13 | 1 | 1 | 564 | 1 | 529 | 0.0 | 1063 |
| Msa0554320 | MtrunA17_Chr3g0113931 | 31.973 | 147 | 97 | 2 | 18 | 162 | 22 | 167 | 1.09e-17 | 86.3 |
| Msa0554320 | MtrunA17_Chr1g0162841 | 28.859 | 149 | 100 | 2 | 1 | 143 | 57 | 205 | 5.41e-14 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0554320 | AT2G20635.1 | 56.295 | 556 | 205 | 3 | 12 | 564 | 5 | 525 | 0.0 | 648 |
| Msa0554320 | AT5G05510.1 | 30.556 | 144 | 96 | 3 | 18 | 159 | 26 | 167 | 5.08e-16 | 81.3 |
| Msa0554320 | AT2G33560.2 | 30.519 | 154 | 99 | 2 | 17 | 169 | 79 | 225 | 9.11e-15 | 77.0 |
| Msa0554320 | AT2G33560.1 | 29.870 | 154 | 99 | 2 | 17 | 169 | 79 | 224 | 4.21e-14 | 74.7 |
Find 142 sgRNAs with CRISPR-Local
Find 465 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCAGATCACACGGTATTTA+AGG | 0.142154 | 4_1:+51577993 | Msa0554320:CDS |
| TATTTAACCTTGATTTATAT+TGG | 0.192543 | 4_1:+51578882 | Msa0554320:three_prime_UTR |
| GCCTTCTCCAACCATTTAAT+TGG | 0.217072 | 4_1:-51574226 | None:intergenic |
| TTCCAATGTGAATTTGTTTC+CGG | 0.219134 | 4_1:+51578841 | Msa0554320:three_prime_UTR |
| AACAAGAGCAATTGTTTAAC+TGG | 0.250934 | 4_1:-51575691 | None:intergenic |
| ATGAGGAATATACCGTTTAA+AGG | 0.268852 | 4_1:-51578283 | None:intergenic |
| AGGGTCTCTGTCTTGTTGAC+TGG | 0.285319 | 4_1:+51577944 | Msa0554320:intron |
| GGATAGGCCGTGGAAATTTC+AGG | 0.295323 | 4_1:+51578059 | Msa0554320:CDS |
| GCTAATGCATGGCAATTAAA+AGG | 0.298137 | 4_1:-51578994 | None:intergenic |
| AAGGGAGATTGTAGGACTTC+TGG | 0.299891 | 4_1:+51578012 | Msa0554320:CDS |
| GTTTCTAAAGTGAGCAAATA+AGG | 0.303094 | 4_1:-51578947 | None:intergenic |
| CATGATGTTGGCTTGATTCA+TGG | 0.315489 | 4_1:+51576401 | Msa0554320:CDS |
| GAACAGTTTCTAGAAGAGTT+AGG | 0.329227 | 4_1:+51575626 | Msa0554320:intron |
| CCAGATCACACGGTATTTAA+GGG | 0.329918 | 4_1:+51577994 | Msa0554320:CDS |
| TCGTCCAAGGAAGCAGCTTA+TGG | 0.330129 | 4_1:-51575663 | None:intergenic |
| ATGGTACTTAATTCCACCTT+TGG | 0.343378 | 4_1:-51575731 | None:intergenic |
| TCTATAAGCTCGGCATTTCC+AGG | 0.343594 | 4_1:+51572990 | Msa0554320:CDS |
| ATTTAACCTTGATTTATATT+GGG | 0.344177 | 4_1:+51578883 | Msa0554320:three_prime_UTR |
| TCCAATGTGAATTTGTTTCC+GGG | 0.350888 | 4_1:+51578842 | Msa0554320:three_prime_UTR |
| AGGAATAAAGTTATAGAGAT+AGG | 0.362344 | 4_1:+51574744 | Msa0554320:CDS |
| TAACGAATAAGCAGATTATC+AGG | 0.372673 | 4_1:-51576434 | None:intergenic |
| GAAATGCAGAGCCAATTAAA+TGG | 0.372734 | 4_1:+51574215 | Msa0554320:intron |
| GATGCTGCATAATACCTATA+TGG | 0.374786 | 4_1:+51578206 | Msa0554320:CDS |
| AGAAACTCTACTGAGAAATA+AGG | 0.378591 | 4_1:-51574254 | None:intergenic |
| ATACCGTTTAAAGGGTAGTC+TGG | 0.385293 | 4_1:-51578274 | None:intergenic |
| TTCATGTATATCAACGAATT+CGG | 0.385582 | 4_1:+51579156 | Msa0554320:three_prime_UTR |
| CACATAAAGTGAAGCATCAT+TGG | 0.388819 | 4_1:-51572915 | None:intergenic |
| ATCTTTCAGAGGTCAAACTA+TGG | 0.389080 | 4_1:+51576125 | Msa0554320:intron |
| TATCAAGGGCTGTGCTGGAC+AGG | 0.396395 | 4_1:+51575753 | Msa0554320:CDS |
| TGCATTCTTCAAAGTGGATA+AGG | 0.400192 | 4_1:-51574718 | None:intergenic |
| GGAATTGAAGAAGTCCTTCC+AGG | 0.400891 | 4_1:+51578582 | Msa0554320:CDS |
| GTCCAGCACAGCCCTTGATA+TGG | 0.404136 | 4_1:-51575750 | None:intergenic |
| TGAGAAATCTAGGATCATTT+CGG | 0.406108 | 4_1:-51572112 | None:intergenic |
| CCCTTAAATACCGTGTGATC+TGG | 0.410725 | 4_1:-51577994 | None:intergenic |
| TACCATATCAAGGGCTGTGC+TGG | 0.414405 | 4_1:+51575748 | Msa0554320:CDS |
| AGGAGCATGTGATGGAAAAC+AGG | 0.418942 | 4_1:-51578800 | None:intergenic |
| AAGGATTTATCTTCTTCAAA+AGG | 0.419099 | 4_1:-51574549 | None:intergenic |
| ATCCTAGATTTCTCAAGATC+TGG | 0.420885 | 4_1:+51572120 | Msa0554320:CDS |
| GGGTCTCTGTCTTGTTGACT+GGG | 0.421552 | 4_1:+51577945 | Msa0554320:intron |
| TTCCCAGACTACCCTTTAAA+CGG | 0.426277 | 4_1:+51578271 | Msa0554320:CDS |
| TGTCTTGTTGACTGGGGAAG+AGG | 0.428927 | 4_1:+51577952 | Msa0554320:CDS |
| ACTACCCTGGCCATGATGAT+AGG | 0.432249 | 4_1:+51578548 | Msa0554320:CDS |
| CTTTAACCCAATATAAATCA+AGG | 0.436169 | 4_1:-51578889 | None:intergenic |
| ATGTAATTTGAGTAACCATC+TGG | 0.437291 | 4_1:+51579050 | Msa0554320:three_prime_UTR |
| AACCAGATCTTGAGAAATCT+AGG | 0.443421 | 4_1:-51572122 | None:intergenic |
| GTCTGTAATTATTTAGCTCA+TGG | 0.445369 | 4_1:+51576191 | Msa0554320:CDS |
| ATTTCCATAAGCTGCTTCCT+TGG | 0.447361 | 4_1:+51575659 | Msa0554320:CDS |
| AAGAGTCTTGTCCGTGACTA+AGG | 0.448895 | 4_1:-51578820 | None:intergenic |
| AAGCGGTTGTTGGCATGATC+AGG | 0.450027 | 4_1:+51577845 | Msa0554320:CDS |
| GCAGATGCATATGGCCTTTG+CGG | 0.453201 | 4_1:+51578171 | Msa0554320:CDS |
| TGAGGAATATACCGTTTAAA+GGG | 0.455127 | 4_1:-51578282 | None:intergenic |
| GAGAGAGTATAACCGGAGAA+AGG | 0.457007 | 4_1:-51571904 | None:intergenic |
| GTCAACGGCGGTTGTGAAAG+TGG | 0.457049 | 4_1:-51571868 | None:intergenic |
| ATCAACTCATATGTGGTCAT+AGG | 0.457303 | 4_1:+51576311 | Msa0554320:CDS |
| TGTGGTCATAGGAAAATTCA+TGG | 0.457949 | 4_1:+51576322 | Msa0554320:CDS |
| TGGAATTAAGTACCATATCA+AGG | 0.458109 | 4_1:+51575738 | Msa0554320:CDS |
| TGATGATAGGAAGTTGTTGC+AGG | 0.460062 | 4_1:+51578561 | Msa0554320:CDS |
| ATCCTCTCTTACCCTTTCTC+CGG | 0.462183 | 4_1:+51571892 | Msa0554320:CDS |
| AACTTCCTATCATCATGGCC+AGG | 0.468707 | 4_1:-51578553 | None:intergenic |
| TTATAAAGAATCTGCTACGT+TGG | 0.469635 | 4_1:+51574483 | Msa0554320:CDS |
| AGGGGTAACCTCACAGAAGA+TGG | 0.471394 | 4_1:+51577810 | Msa0554320:intron |
| GGAAATGCCGAGCTTATAGA+TGG | 0.474826 | 4_1:-51572987 | None:intergenic |
| TCGAGCACTAAATCTTATAC+AGG | 0.477530 | 4_1:+51574687 | Msa0554320:CDS |
| TGTCAACAGGCAGATGCATA+TGG | 0.477835 | 4_1:+51578162 | Msa0554320:intron |
| CATAGACAGCTCAGCAGAAG+TGG | 0.478020 | 4_1:-51578709 | None:intergenic |
| GTCTTGTTGACTGGGGAAGA+GGG | 0.481446 | 4_1:+51577953 | Msa0554320:CDS |
| GCTCTTGTTTGTCCTTGTCA+TGG | 0.481848 | 4_1:+51575705 | Msa0554320:CDS |
| TTTAGTGCCACAACTTCATC+AGG | 0.484459 | 4_1:-51575817 | None:intergenic |
| AGAGAGTATAACCGGAGAAA+GGG | 0.485393 | 4_1:-51571903 | None:intergenic |
| TCTTAGACCGAAGCGGTTGT+TGG | 0.486235 | 4_1:+51577835 | Msa0554320:CDS |
| ATTGAAACTTTGCATGATGT+TGG | 0.493369 | 4_1:+51576389 | Msa0554320:CDS |
| CGGTATTTAAGGGAGATTGT+AGG | 0.498060 | 4_1:+51578004 | Msa0554320:CDS |
| GTCCTTGTCATGGCATCCAA+AGG | 0.499078 | 4_1:+51575715 | Msa0554320:CDS |
| TTGAGTTTCTTTATACGTTG+AGG | 0.503378 | 4_1:-51578622 | None:intergenic |
| GATCATGCCAACAACCGCTT+CGG | 0.504689 | 4_1:-51577842 | None:intergenic |
| TGCAGAGCCAATTAAATGGT+TGG | 0.506536 | 4_1:+51574219 | Msa0554320:CDS |
| TAAAACTCCCAAGGGAAAGC+TGG | 0.507197 | 4_1:-51575936 | None:intergenic |
| TACTCAAATTACATAATACA+AGG | 0.515399 | 4_1:-51579041 | None:intergenic |
| AGGAGTTACTCGCGAAGCAA+AGG | 0.517311 | 4_1:+51578644 | Msa0554320:CDS |
| AAAATAATGACATTAATCCA+TGG | 0.520606 | 4_1:+51574506 | Msa0554320:CDS |
| CCTTGATGCATTCTTCAAAG+TGG | 0.528643 | 4_1:-51574724 | None:intergenic |
| GGAGTTACTCGCGAAGCAAA+GGG | 0.529180 | 4_1:+51578645 | Msa0554320:CDS |
| TTTAGCTCATGGGACACTAC+AGG | 0.533494 | 4_1:+51576202 | Msa0554320:CDS |
| GCATTGAGATGCAGGAGGAT+AGG | 0.536057 | 4_1:+51578043 | Msa0554320:CDS |
| CTAACAATTAGCATCTATAG+AGG | 0.536777 | 4_1:-51579016 | None:intergenic |
| GTTACTGGAACGTCGAGCTA+TGG | 0.540651 | 4_1:+51578497 | Msa0554320:intron |
| ACACTTGCATGTGCGCGTCC+CGG | 0.540995 | 4_1:-51578860 | None:intergenic |
| ATCTAGGATCATTTCGGTAG+CGG | 0.541954 | 4_1:-51572106 | None:intergenic |
| ACTGAAACTCAACAACTCAA+TGG | 0.543207 | 4_1:+51571821 | None:intergenic |
| TACCGTTTAAAGGGTAGTCT+GGG | 0.543989 | 4_1:-51578273 | None:intergenic |
| TCTGTAATTATTTAGCTCAT+GGG | 0.545403 | 4_1:+51576192 | Msa0554320:CDS |
| GCCAATTAAATGGTTGGAGA+AGG | 0.547669 | 4_1:+51574225 | Msa0554320:CDS |
| AAATAATGACATTAATCCAT+GGG | 0.548303 | 4_1:+51574507 | Msa0554320:CDS |
| TTAACTGGAACTTTCGTCCA+AGG | 0.551902 | 4_1:-51575676 | None:intergenic |
| TGATGAAGTTGTGGCACTAA+AGG | 0.552634 | 4_1:+51575819 | Msa0554320:CDS |
| CCACTTTGAAGAATGCATCA+AGG | 0.554945 | 4_1:+51574724 | Msa0554320:CDS |
| GATCAGAGCTGATATAGTCC+TGG | 0.561424 | 4_1:-51578600 | None:intergenic |
| GCAACAACTTCCTATCATCA+TGG | 0.569220 | 4_1:-51578558 | None:intergenic |
| CACCTTTGGATGCCATGACA+AGG | 0.570471 | 4_1:-51575717 | None:intergenic |
| CAATACTATAAAGTGAAGCA+AGG | 0.576715 | 4_1:+51578916 | Msa0554320:three_prime_UTR |
| ATCAAGGGCTGTGCTGGACA+GGG | 0.576821 | 4_1:+51575754 | Msa0554320:CDS |
| CAAGGTTGCTTCAAGCCAGA+AGG | 0.585263 | 4_1:+51574285 | Msa0554320:CDS |
| CGATACATGTAAAACTCCCA+AGG | 0.587726 | 4_1:-51575945 | None:intergenic |
| GCTGACACCATCTATAAGCT+CGG | 0.589888 | 4_1:+51572980 | Msa0554320:CDS |
| AACCGGAGAAAGGGTAAGAG+AGG | 0.591054 | 4_1:-51571894 | None:intergenic |
| CAAAAGGTCATTCAGAGTAG+AGG | 0.591431 | 4_1:-51574533 | None:intergenic |
| GGAATTAAGTACCATATCAA+GGG | 0.593763 | 4_1:+51575739 | Msa0554320:CDS |
| TAGAGTTTCTGAAATATGCA+AGG | 0.593936 | 4_1:+51574267 | Msa0554320:CDS |
| CGTGACTAAGGAGCATGTGA+TGG | 0.596999 | 4_1:-51578808 | None:intergenic |
| TTCAGAGTAGAGGCATCCCA+TGG | 0.598106 | 4_1:-51574523 | None:intergenic |
| AGATGCAGGAGGATAGGCCG+TGG | 0.601296 | 4_1:+51578049 | Msa0554320:CDS |
| TATAAGATTTAGTGCTCGAA+CGG | 0.602170 | 4_1:-51574683 | None:intergenic |
| ATCTGCTTATTCGTTATGCT+AGG | 0.602539 | 4_1:+51576441 | Msa0554320:CDS |
| GGATGTCATCAACTCATATG+TGG | 0.602720 | 4_1:+51576304 | Msa0554320:intron |
| TCAACGTATAAAGAAACTCA+AGG | 0.607844 | 4_1:+51578624 | Msa0554320:CDS |
| AATACTATAAAGTGAAGCAA+GGG | 0.607975 | 4_1:+51578917 | Msa0554320:three_prime_UTR |
| GGGGTAACCTCACAGAAGAT+GGG | 0.608152 | 4_1:+51577811 | Msa0554320:intron |
| AGAGCTGATATAGTCCTGGA+AGG | 0.609239 | 4_1:-51578596 | None:intergenic |
| CTTGTCATGGCATCCAAAGG+TGG | 0.609586 | 4_1:+51575718 | Msa0554320:CDS |
| GGGTAAGAGAGGATCGTCAA+CGG | 0.611901 | 4_1:-51571883 | None:intergenic |
| GATTGTTAAGTTTCACTCGA+AGG | 0.616728 | 4_1:+51579129 | Msa0554320:three_prime_UTR |
| CATCACATGCTCCTTAGTCA+CGG | 0.618109 | 4_1:+51578809 | Msa0554320:three_prime_UTR |
| ACTTCCTATCATCATGGCCA+GGG | 0.620638 | 4_1:-51578552 | None:intergenic |
| TCCCGGAAACAAATTCACAT+TGG | 0.621279 | 4_1:-51578843 | None:intergenic |
| TGACTCACCTGAAATTTCCA+CGG | 0.621709 | 4_1:-51578066 | None:intergenic |
| CAGTGATCCTGATGAAGTTG+TGG | 0.630586 | 4_1:+51575810 | Msa0554320:CDS |
| GGATGAGTTGCGGAGGAGCG+TGG | 0.647743 | 4_1:-51571847 | None:intergenic |
| TAATCTCTTTCCAGATCACA+CGG | 0.648178 | 4_1:+51577984 | Msa0554320:CDS |
| CATCTATAGAGGCTAATGCA+TGG | 0.649406 | 4_1:-51579005 | None:intergenic |
| TTGTGAAAGTGGATGAGTTG+CGG | 0.649491 | 4_1:-51571857 | None:intergenic |
| TCGTATGAACAACACCGCAA+AGG | 0.654155 | 4_1:-51578185 | None:intergenic |
| GGTCTCTGTCTTGTTGACTG+GGG | 0.656870 | 4_1:+51577946 | Msa0554320:CDS |
| GATACATGTAAAACTCCCAA+GGG | 0.657048 | 4_1:-51575944 | None:intergenic |
| AAGGGCTGTGCTGGACAGGG+AGG | 0.672386 | 4_1:+51575757 | Msa0554320:CDS |
| GATGGGTTCTTAGACCGAAG+CGG | 0.673200 | 4_1:+51577828 | Msa0554320:CDS |
| TCGATGCATTGAGATGCAGG+AGG | 0.674555 | 4_1:+51578038 | Msa0554320:CDS |
| ACTCAAATTACATAATACAA+GGG | 0.690575 | 4_1:-51579040 | None:intergenic |
| TGAAAGTGGATGAGTTGCGG+AGG | 0.698527 | 4_1:-51571854 | None:intergenic |
| AAGATGCTTAATGACTACCC+TGG | 0.701217 | 4_1:+51578535 | Msa0554320:CDS |
| TGAGTTGCGGAGGAGCGTGG+TGG | 0.702593 | 4_1:-51571844 | None:intergenic |
| CTAAGAACCCATCTTCTGTG+AGG | 0.704393 | 4_1:-51577818 | None:intergenic |
| TAAGAGAGGATCGTCAACGG+CGG | 0.744806 | 4_1:-51571880 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATAATAATAATAATAGCA+TGG | - | chr4_1:51572461-51572480 | None:intergenic | 10.0% |
| !! | AATAAAATAATACTTCATTT+AGG | + | chr4_1:51573987-51574006 | Msa0554320:intron | 10.0% |
| !!! | ACTATATTATTTTGTTTTTA+AGG | + | chr4_1:51576709-51576728 | Msa0554320:intron | 10.0% |
| !!! | TAATTTTTATTCTGATAATT+TGG | + | chr4_1:51578459-51578478 | Msa0554320:intron | 10.0% |
| !!! | GAAATGTTAATTGAAATTTT+GGG | - | chr4_1:51572180-51572199 | None:intergenic | 15.0% |
| !!! | TGAAATGTTAATTGAAATTT+TGG | - | chr4_1:51572181-51572200 | None:intergenic | 15.0% |
| !! | ATGTTAATTGCAATATAATA+CGG | - | chr4_1:51572219-51572238 | None:intergenic | 15.0% |
| !!! | TACAAATAACTATTTCTATT+TGG | + | chr4_1:51572505-51572524 | Msa0554320:intron | 15.0% |
| !! | TTTAATAATAAGAGACATAT+AGG | + | chr4_1:51572604-51572623 | Msa0554320:intron | 15.0% |
| !! | TTAATAATAAGAGACATATA+GGG | + | chr4_1:51572605-51572624 | Msa0554320:intron | 15.0% |
| !! | TTTCTTAATATGTGTATAAT+TGG | + | chr4_1:51572696-51572715 | Msa0554320:intron | 15.0% |
| !! | TATAAACTTGTATACTTATT+AGG | + | chr4_1:51573471-51573490 | Msa0554320:intron | 15.0% |
| !!! | GAATTTAAATGATAATTTTG+CGG | + | chr4_1:51573593-51573612 | Msa0554320:intron | 15.0% |
| !! | TAAAGAATAGTGATATATAA+AGG | - | chr4_1:51574363-51574382 | None:intergenic | 15.0% |
| !! | TTATATATCACTATTCTTTA+TGG | + | chr4_1:51574363-51574382 | Msa0554320:intron | 15.0% |
| !!! | TAACATTTTTTTTCTTTGTT+AGG | - | chr4_1:51574947-51574966 | None:intergenic | 15.0% |
| !! | ATACAAGACATTAAAAAAAA+GGG | - | chr4_1:51575429-51575448 | None:intergenic | 15.0% |
| !! | AATACAAGACATTAAAAAAA+AGG | - | chr4_1:51575430-51575449 | None:intergenic | 15.0% |
| !!! | GATTAACTTTAAAAGATTAA+AGG | - | chr4_1:51575598-51575617 | None:intergenic | 15.0% |
| !!! | ATGTTATATTTCTATGTATA+GGG | - | chr4_1:51575872-51575891 | None:intergenic | 15.0% |
| !!! | TATGTTATATTTCTATGTAT+AGG | - | chr4_1:51575873-51575892 | None:intergenic | 15.0% |
| !! | TTCTATATCTAAAAAAAGTA+GGG | + | chr4_1:51576656-51576675 | Msa0554320:intron | 15.0% |
| !! | TAAAACATATTATAATGTCA+GGG | - | chr4_1:51577057-51577076 | None:intergenic | 15.0% |
| !! | ATAAAACATATTATAATGTC+AGG | - | chr4_1:51577058-51577077 | None:intergenic | 15.0% |
| !!! | ATAATATGTTTTATCTTTCA+TGG | + | chr4_1:51577064-51577083 | Msa0554320:intron | 15.0% |
| !! | ATTAAAAGATAAATGATTTG+TGG | + | chr4_1:51577373-51577392 | Msa0554320:intron | 15.0% |
| !!! | ATACATTTTTTTTATCTTTC+AGG | + | chr4_1:51577924-51577943 | Msa0554320:intron | 15.0% |
| !!! | TACATTTTTTTTATCTTTCA+GGG | + | chr4_1:51577925-51577944 | Msa0554320:intron | 15.0% |
| !! | AAATTAAAGTTGAAAACAAA+AGG | - | chr4_1:51578445-51578464 | None:intergenic | 15.0% |
| !! | TATTTAACCTTGATTTATAT+TGG | + | chr4_1:51578882-51578901 | Msa0554320:three_prime_UTR | 15.0% |
| !! | ATTTAACCTTGATTTATATT+GGG | + | chr4_1:51578883-51578902 | Msa0554320:three_prime_UTR | 15.0% |
| !! | AGAGTTGAAATATTACATAT+AGG | - | chr4_1:51572148-51572167 | None:intergenic | 20.0% |
| !! | AATGCTACTACTAAAATAAA+AGG | - | chr4_1:51572246-51572265 | None:intergenic | 20.0% |
| !! | AATAATAATAATAGCATGGT+CGG | - | chr4_1:51572457-51572476 | None:intergenic | 20.0% |
| !!! | GTTATTTGTAGATACATTTT+AGG | - | chr4_1:51572495-51572514 | None:intergenic | 20.0% |
| !!! | CACAATTCATTTTTTGAAAA+AGG | + | chr4_1:51573177-51573196 | Msa0554320:intron | 20.0% |
| !!! | TAATGAGTTTCAATTTTCAA+AGG | + | chr4_1:51573203-51573222 | Msa0554320:intron | 20.0% |
| !!! | ATTTTCAAAGGTATTTGAAA+TGG | + | chr4_1:51573215-51573234 | Msa0554320:intron | 20.0% |
| !!! | TTTTCAAAGGTATTTGAAAT+GGG | + | chr4_1:51573216-51573235 | Msa0554320:intron | 20.0% |
| !! | ATTTGATTAAAAGAATGTAC+TGG | - | chr4_1:51573698-51573717 | None:intergenic | 20.0% |
| !!! | TTATCAACATTATAATTTGC+AGG | - | chr4_1:51573920-51573939 | None:intergenic | 20.0% |
| !!! | AATGTTGATAAACAAATTAC+AGG | + | chr4_1:51573929-51573948 | Msa0554320:intron | 20.0% |
| !! | TATAATTCGAATTTGCAAAT+CGG | - | chr4_1:51574015-51574034 | None:intergenic | 20.0% |
| !!! | TAAAGACAATTATTTTGAGA+TGG | + | chr4_1:51574033-51574052 | Msa0554320:intron | 20.0% |
| !!! | ATGGTAAATATATTTGTTAG+AGG | + | chr4_1:51574052-51574071 | Msa0554320:intron | 20.0% |
| !!! | TGGTAAATATATTTGTTAGA+GGG | + | chr4_1:51574053-51574072 | Msa0554320:intron | 20.0% |
| !!! | TGTAGTTCTAATTTTATGTT+TGG | + | chr4_1:51574179-51574198 | Msa0554320:intron | 20.0% |
| !! | CTTATGTAACTTATAATTTC+AGG | + | chr4_1:51574456-51574475 | Msa0554320:intron | 20.0% |
| !! | AAAATAATGACATTAATCCA+TGG | + | chr4_1:51574506-51574525 | Msa0554320:CDS | 20.0% |
| !! | AAATAATGACATTAATCCAT+GGG | + | chr4_1:51574507-51574526 | Msa0554320:CDS | 20.0% |
| !!! | ACGTCAAATTTTGTAATTAA+AGG | - | chr4_1:51574571-51574590 | None:intergenic | 20.0% |
| !! | ATGTATTTAAAGACATGTAA+GGG | - | chr4_1:51574653-51574672 | None:intergenic | 20.0% |
| !! | AATGTATTTAAAGACATGTA+AGG | - | chr4_1:51574654-51574673 | None:intergenic | 20.0% |
| !! | ATGTCTTTAAATACATTTCA+GGG | + | chr4_1:51574657-51574676 | Msa0554320:intron | 20.0% |
| !! | ATTCATATAAAATTCACTCT+TGG | - | chr4_1:51574868-51574887 | None:intergenic | 20.0% |
| !! | AGAAAAAAAATGTTATGAAG+AGG | + | chr4_1:51574952-51574971 | Msa0554320:intron | 20.0% |
| !! | ACTAAAACTTTATCTTGAAA+TGG | + | chr4_1:51575059-51575078 | Msa0554320:intron | 20.0% |
| !! | CAATTATGTAGTTATCTTAT+TGG | + | chr4_1:51575454-51575473 | Msa0554320:intron | 20.0% |
| !! | AAGATTAAAGGAAAAAACAA+GGG | - | chr4_1:51575586-51575605 | None:intergenic | 20.0% |
| !! | AAAGATTAAAGGAAAAAACA+AGG | - | chr4_1:51575587-51575606 | None:intergenic | 20.0% |
| !!! | TGTTATATTTCTATGTATAG+GGG | - | chr4_1:51575871-51575890 | None:intergenic | 20.0% |
| !!! | ATTTTGATTTTACAAAACTG+AGG | - | chr4_1:51576519-51576538 | None:intergenic | 20.0% |
| !!! | CTACTTTTTTTAGATATAGA+AGG | - | chr4_1:51576657-51576676 | None:intergenic | 20.0% |
| !! | CTTCTATATCTAAAAAAAGT+AGG | + | chr4_1:51576655-51576674 | Msa0554320:intron | 20.0% |
| !! | TCTATATCTAAAAAAAGTAG+GGG | + | chr4_1:51576657-51576676 | Msa0554320:intron | 20.0% |
| !!! | TTATTTTGTTTTTAAGGATG+TGG | + | chr4_1:51576715-51576734 | Msa0554320:intron | 20.0% |
| !!! | TATTTTGTTTTTAAGGATGT+GGG | + | chr4_1:51576716-51576735 | Msa0554320:intron | 20.0% |
| !! | AATGATTCTATGACTAATTT+GGG | - | chr4_1:51577014-51577033 | None:intergenic | 20.0% |
| !! | TAATGATTCTATGACTAATT+TGG | - | chr4_1:51577015-51577034 | None:intergenic | 20.0% |
| !!! | ATTGTTTTCGTTATTTTGAA+GGG | + | chr4_1:51577791-51577810 | Msa0554320:intron | 20.0% |
| !!! | ATCAGATGATTCTTTTTTAA+CGG | - | chr4_1:51578235-51578254 | None:intergenic | 20.0% |
| !! | TTAAAAAAGAATCATCTGAT+GGG | + | chr4_1:51578235-51578254 | Msa0554320:CDS | 20.0% |
| !! | ACTCAAATTACATAATACAA+GGG | - | chr4_1:51579043-51579062 | None:intergenic | 20.0% |
| !! | TACTCAAATTACATAATACA+AGG | - | chr4_1:51579044-51579063 | None:intergenic | 20.0% |
| ! | ATTCACAAAATGCAGAAAAT+TGG | - | chr4_1:51571982-51572001 | None:intergenic | 25.0% |
| ! | GATTAATTTCTATGCACTAA+CGG | - | chr4_1:51572569-51572588 | None:intergenic | 25.0% |
| ! | AAAGAGACAAAAGATTTAGA+AGG | + | chr4_1:51572640-51572659 | Msa0554320:intron | 25.0% |
| !!! | TTGTTACTCTTCCATTTTTA+CGG | - | chr4_1:51572722-51572741 | None:intergenic | 25.0% |
| ! | ACAACTAGTTATTGTTTGAA+CGG | + | chr4_1:51572738-51572757 | Msa0554320:intron | 25.0% |
| !!! | CATAATGATTTGTTAGGAAA+AGG | + | chr4_1:51573065-51573084 | Msa0554320:intron | 25.0% |
| ! | CAATTATAGGAAACTGTATT+TGG | - | chr4_1:51573110-51573129 | None:intergenic | 25.0% |
| ! | ACTAAAACCATAGCAATTAT+AGG | - | chr4_1:51573123-51573142 | None:intergenic | 25.0% |
| !!! | TATTTCTAGTAGATCTTGAA+TGG | + | chr4_1:51573405-51573424 | Msa0554320:intron | 25.0% |
| !!! | ATTTCTAGTAGATCTTGAAT+GGG | + | chr4_1:51573406-51573425 | Msa0554320:intron | 25.0% |
| ! | ATCTGGGAAACTAATAAATT+TGG | - | chr4_1:51573729-51573748 | None:intergenic | 25.0% |
| ! | TTTCAAAGAATTGCTAATGT+TGG | - | chr4_1:51573833-51573852 | None:intergenic | 25.0% |
| ! | TATAAAACACCACGAAAAAA+TGG | - | chr4_1:51574113-51574132 | None:intergenic | 25.0% |
| !!! | TCTGTTTTATTCTGATTTGT+TGG | + | chr4_1:51574133-51574152 | Msa0554320:intron | 25.0% |
| !!! | TTGGCTCAATTTTTAACTAT+GGG | - | chr4_1:51574340-51574359 | None:intergenic | 25.0% |
| ! | GAATAGTGATATATAAAGGT+TGG | - | chr4_1:51574359-51574378 | None:intergenic | 25.0% |
| ! | CTAAAAATTGAACTGAAACA+GGG | - | chr4_1:51574411-51574430 | None:intergenic | 25.0% |
| ! | TCTAAAAATTGAACTGAAAC+AGG | - | chr4_1:51574412-51574431 | None:intergenic | 25.0% |
| ! | AAGGATTTATCTTCTTCAAA+AGG | - | chr4_1:51574552-51574571 | None:intergenic | 25.0% |
| ! | TAAGTTTAAGCATGTAACAA+AGG | - | chr4_1:51574607-51574626 | None:intergenic | 25.0% |
| ! | CATGTCTTTAAATACATTTC+AGG | + | chr4_1:51574656-51574675 | Msa0554320:intron | 25.0% |
| ! | TGTCTTTAAATACATTTCAG+GGG | + | chr4_1:51574658-51574677 | Msa0554320:intron | 25.0% |
| ! | AGGAATAAAGTTATAGAGAT+AGG | + | chr4_1:51574744-51574763 | Msa0554320:CDS | 25.0% |
| !!! | ATACCATTTTGTTATGAGAT+CGG | + | chr4_1:51574912-51574931 | Msa0554320:intron | 25.0% |
| ! | GTATGTATTAACTCTTCTTA+TGG | + | chr4_1:51575035-51575054 | Msa0554320:intron | 25.0% |
| !! | GTTATATTTCTATGTATAGG+GGG | - | chr4_1:51575870-51575889 | None:intergenic | 25.0% |
| ! | ATATAACATATTGTCTCATC+AGG | + | chr4_1:51575883-51575902 | Msa0554320:intron | 25.0% |
| !! | TCTGTAATTATTTAGCTCAT+GGG | + | chr4_1:51576192-51576211 | Msa0554320:CDS | 25.0% |
| ! | AGTAACAGTACAAAAACAAT+GGG | - | chr4_1:51576692-51576711 | None:intergenic | 25.0% |
| ! | TAGTAACAGTACAAAAACAA+TGG | - | chr4_1:51576693-51576712 | None:intergenic | 25.0% |
| !!! | ATTTTGTTTTTAAGGATGTG+GGG | + | chr4_1:51576717-51576736 | Msa0554320:intron | 25.0% |
| !!! | GTAAAGTATCATCCTTATTT+TGG | + | chr4_1:51576763-51576782 | Msa0554320:intron | 25.0% |
| ! | TAAGAAGACATGCATAAAAA+AGG | + | chr4_1:51576877-51576896 | Msa0554320:intron | 25.0% |
| !!! | TGTATCATTTTGATGATTCA+AGG | + | chr4_1:51577101-51577120 | Msa0554320:intron | 25.0% |
| ! | ACTATGCTAAAAGTTCAATT+TGG | - | chr4_1:51577128-51577147 | None:intergenic | 25.0% |
| ! | TTCATCTAAATTCAGTTGTA+TGG | + | chr4_1:51577251-51577270 | Msa0554320:intron | 25.0% |
| !!! | CAAAAGTGTTAATCATTTAC+TGG | + | chr4_1:51577533-51577552 | Msa0554320:intron | 25.0% |
| !!! | CATTGTTTTCGTTATTTTGA+AGG | + | chr4_1:51577790-51577809 | Msa0554320:intron | 25.0% |
| !!! | TTGTTTTCGTTATTTTGAAG+GGG | + | chr4_1:51577792-51577811 | Msa0554320:intron | 25.0% |
| !!! | TTTTTTAACGGTTTCCATAT+AGG | - | chr4_1:51578223-51578242 | None:intergenic | 25.0% |
| ! | GTTAAAAAAGAATCATCTGA+TGG | + | chr4_1:51578234-51578253 | Msa0554320:CDS | 25.0% |
| ! | TAAAAAAGAATCATCTGATG+GGG | + | chr4_1:51578236-51578255 | Msa0554320:CDS | 25.0% |
| ! | TTGGATGTAACTATAAAATG+AGG | - | chr4_1:51578303-51578322 | None:intergenic | 25.0% |
| !! | TACTTTTGTACTCTATGATT+AGG | + | chr4_1:51578327-51578346 | Msa0554320:intron | 25.0% |
| !! | ACTTTTGTACTCTATGATTA+GGG | + | chr4_1:51578328-51578347 | Msa0554320:intron | 25.0% |
| !!! | CCAAATTGATTTTACCAAAT+CGG | - | chr4_1:51578396-51578415 | None:intergenic | 25.0% |
| ! | TAAAATCAATTTGGAAGCTA+TGG | + | chr4_1:51578402-51578421 | Msa0554320:intron | 25.0% |
| ! | AAAGTTGAAAACAAAAGGAA+GGG | - | chr4_1:51578440-51578459 | None:intergenic | 25.0% |
| ! | TAAAGTTGAAAACAAAAGGA+AGG | - | chr4_1:51578441-51578460 | None:intergenic | 25.0% |
| ! | CTTTAACCCAATATAAATCA+AGG | - | chr4_1:51578892-51578911 | None:intergenic | 25.0% |
| ! | AATACTATAAAGTGAAGCAA+GGG | + | chr4_1:51578917-51578936 | Msa0554320:three_prime_UTR | 25.0% |
| ! | TTCATGTATATCAACGAATT+CGG | + | chr4_1:51579156-51579175 | Msa0554320:three_prime_UTR | 25.0% |
| ! | TGCATTTTGTGAATGAATTC+AGG | + | chr4_1:51571988-51572007 | Msa0554320:intron | 30.0% |
| ! | TGAGAAATCTAGGATCATTT+CGG | - | chr4_1:51572115-51572134 | None:intergenic | 30.0% |
| ACTAAAAAAATGGAGTGATG+TGG | - | chr4_1:51572279-51572298 | None:intergenic | 30.0% | |
| !!! | ATCACTCCATTTTTTTAGTG+TGG | + | chr4_1:51572280-51572299 | Msa0554320:intron | 30.0% |
| GAGAAACCACACTAAAAAAA+TGG | - | chr4_1:51572289-51572308 | None:intergenic | 30.0% | |
| TTATATGTCCACTAAACTCA+TGG | + | chr4_1:51572344-51572363 | Msa0554320:intron | 30.0% | |
| AGTAATTACCATGAGTTTAG+TGG | - | chr4_1:51572355-51572374 | None:intergenic | 30.0% | |
| TGTATAATTGGCCGTAAAAA+TGG | + | chr4_1:51572708-51572727 | Msa0554320:intron | 30.0% | |
| TTGAGAACCTTTCAATTTCA+AGG | - | chr4_1:51572807-51572826 | None:intergenic | 30.0% | |
| AAATTGAAAGGTTCTCAACT+TGG | + | chr4_1:51572809-51572828 | Msa0554320:intron | 30.0% | |
| !! | TATTGGTTTCTTTATGCAGA+TGG | + | chr4_1:51572835-51572854 | Msa0554320:intron | 30.0% |
| !! | GATTTTGACAGTGTTTTCAA+AGG | + | chr4_1:51572869-51572888 | Msa0554320:CDS | 30.0% |
| !!! | TGCATGTTTTTTTGAAGCAA+AGG | + | chr4_1:51572943-51572962 | Msa0554320:CDS | 30.0% |
| !!! | GCATGTTTTTTTGAAGCAAA+GGG | + | chr4_1:51572944-51572963 | Msa0554320:CDS | 30.0% |
| !! | TCTGCTTTTGATATTGCAAA+TGG | + | chr4_1:51573039-51573058 | Msa0554320:intron | 30.0% |
| !! | TGGTAGCATAATGATTTGTT+AGG | + | chr4_1:51573059-51573078 | Msa0554320:intron | 30.0% |
| ACAGTTTCCTATAATTGCTA+TGG | + | chr4_1:51573113-51573132 | Msa0554320:intron | 30.0% | |
| AATTTGCATCTATCAGTTTG+TGG | + | chr4_1:51573248-51573267 | Msa0554320:intron | 30.0% | |
| GAGTGAATCTTTAAACAAAG+TGG | + | chr4_1:51573342-51573361 | Msa0554320:intron | 30.0% | |
| ! | TTTCTAGTAGATCTTGAATG+GGG | + | chr4_1:51573407-51573426 | Msa0554320:intron | 30.0% |
| GGTACATTTGTCAGAATATT+TGG | + | chr4_1:51573614-51573633 | Msa0554320:intron | 30.0% | |
| !! | AATGTACTGGTTCAATTGAT+GGG | - | chr4_1:51573685-51573704 | None:intergenic | 30.0% |
| GTAATGAAGTAGATGTATCT+GGG | - | chr4_1:51573745-51573764 | None:intergenic | 30.0% | |
| CGTAAATTCTTAAAGAGTCT+TGG | - | chr4_1:51573790-51573809 | None:intergenic | 30.0% | |
| ! | TTGGTTAATTCAGAAAGTGT+GGG | - | chr4_1:51573867-51573886 | None:intergenic | 30.0% |
| TTTGGTTAATTCAGAAAGTG+TGG | - | chr4_1:51573868-51573887 | None:intergenic | 30.0% | |
| ACTTTCTTGACATAAAGCTT+TGG | - | chr4_1:51573886-51573905 | None:intergenic | 30.0% | |
| AATAACAAACTTGCATCCTT+CGG | + | chr4_1:51573959-51573978 | Msa0554320:intron | 30.0% | |
| !! | ATTATTTTATTCACAGCCGA+AGG | - | chr4_1:51573978-51573997 | None:intergenic | 30.0% |
| AGAAACTCTACTGAGAAATA+AGG | - | chr4_1:51574257-51574276 | None:intergenic | 30.0% | |
| !! | TAGAGTTTCTGAAATATGCA+AGG | + | chr4_1:51574267-51574286 | Msa0554320:CDS | 30.0% |
| CAATATGATTTCATACCTTC+TGG | - | chr4_1:51574303-51574322 | None:intergenic | 30.0% | |
| !! | GTTGGCTCAATTTTTAACTA+TGG | - | chr4_1:51574341-51574360 | None:intergenic | 30.0% |
| TTATAAAGAATCTGCTACGT+TGG | + | chr4_1:51574483-51574502 | Msa0554320:CDS | 30.0% | |
| TATAAGATTTAGTGCTCGAA+CGG | - | chr4_1:51574686-51574705 | None:intergenic | 30.0% | |
| GATCATACATACACAGAAAA+TGG | - | chr4_1:51574839-51574858 | None:intergenic | 30.0% | |
| !! | TACCATTTTGTTATGAGATC+GGG | + | chr4_1:51574913-51574932 | Msa0554320:intron | 30.0% |
| TTGCATGTCTAATTCATATC+TGG | + | chr4_1:51575002-51575021 | Msa0554320:intron | 30.0% | |
| ! | TTATTGATTGCAGATTTCAG+AGG | + | chr4_1:51575130-51575149 | Msa0554320:intron | 30.0% |
| ! | TATTGATTGCAGATTTCAGA+GGG | + | chr4_1:51575131-51575150 | Msa0554320:intron | 30.0% |
| ! | CTCTTAGTGTTGTTAAATAG+TGG | - | chr4_1:51575174-51575193 | None:intergenic | 30.0% |
| TGTAAAAAACAGGGTAAGTA+AGG | + | chr4_1:51575327-51575346 | Msa0554320:intron | 30.0% | |
| TACAATACACCAAAAATGGT+GGG | + | chr4_1:51575355-51575374 | Msa0554320:intron | 30.0% | |
| AACAAGAGCAATTGTTTAAC+TGG | - | chr4_1:51575694-51575713 | None:intergenic | 30.0% | |
| TGGAATTAAGTACCATATCA+AGG | + | chr4_1:51575738-51575757 | Msa0554320:CDS | 30.0% | |
| GGAATTAAGTACCATATCAA+GGG | + | chr4_1:51575739-51575758 | Msa0554320:CDS | 30.0% | |
| ! | TTCATAGAAAAGCAAGTTGA+TGG | - | chr4_1:51576022-51576041 | None:intergenic | 30.0% |
| ! | GTCTGTAATTATTTAGCTCA+TGG | + | chr4_1:51576191-51576210 | Msa0554320:CDS | 30.0% |
| AGATAATGAGGGAAATCAAA+AGG | - | chr4_1:51576238-51576257 | None:intergenic | 30.0% | |
| TTCAACAGAAAATTCTATGC+AGG | + | chr4_1:51576283-51576302 | Msa0554320:intron | 30.0% | |
| ATTGAAACTTTGCATGATGT+TGG | + | chr4_1:51576389-51576408 | Msa0554320:CDS | 30.0% | |
| TAACGAATAAGCAGATTATC+AGG | - | chr4_1:51576437-51576456 | None:intergenic | 30.0% | |
| AGACAAATTATCGAGGTAAA+AGG | - | chr4_1:51576565-51576584 | None:intergenic | 30.0% | |
| TGAAAAGAGACAAATTATCG+AGG | - | chr4_1:51576572-51576591 | None:intergenic | 30.0% | |
| !!! | GTATCATCCTTATTTTGGAT+AGG | + | chr4_1:51576768-51576787 | Msa0554320:intron | 30.0% |
| TAGTTGTCCTATCCAAAATA+AGG | - | chr4_1:51576778-51576797 | None:intergenic | 30.0% | |
| TGAACAGATCTTGATGTATT+CGG | - | chr4_1:51576843-51576862 | None:intergenic | 30.0% | |
| ! | TTGAACTTTTAGCATAGTCA+TGG | + | chr4_1:51577130-51577149 | Msa0554320:intron | 30.0% |
| ATGGTTTACTCTCTTACATT+TGG | + | chr4_1:51577192-51577211 | Msa0554320:intron | 30.0% | |
| AAATGATCAACGTAAGAAGT+TGG | - | chr4_1:51577224-51577243 | None:intergenic | 30.0% | |
| CTAAATTCAGTTGTATGGAA+TGG | + | chr4_1:51577256-51577275 | Msa0554320:intron | 30.0% | |
| TAACAGAAGAGCAACTTTAA+AGG | - | chr4_1:51578137-51578156 | None:intergenic | 30.0% | |
| AAAAAAGAATCATCTGATGG+GGG | + | chr4_1:51578237-51578256 | Msa0554320:CDS | 30.0% | |
| TGAGGAATATACCGTTTAAA+GGG | - | chr4_1:51578285-51578304 | None:intergenic | 30.0% | |
| ATGAGGAATATACCGTTTAA+AGG | - | chr4_1:51578286-51578305 | None:intergenic | 30.0% | |
| TAGAGTACAAAAGTAGCAAT+TGG | - | chr4_1:51578322-51578341 | None:intergenic | 30.0% | |
| ! | CTTTTGTACTCTATGATTAG+GGG | + | chr4_1:51578329-51578348 | Msa0554320:intron | 30.0% |
| !! | CCGATTTGGTAAAATCAATT+TGG | + | chr4_1:51578393-51578412 | Msa0554320:intron | 30.0% |
| TTGTTGTATCAAACAGTTAC+TGG | + | chr4_1:51578482-51578501 | Msa0554320:intron | 30.0% | |
| TTGAGTTTCTTTATACGTTG+AGG | - | chr4_1:51578625-51578644 | None:intergenic | 30.0% | |
| TCAACGTATAAAGAAACTCA+AGG | + | chr4_1:51578624-51578643 | Msa0554320:CDS | 30.0% | |
| ! | TTCCAATGTGAATTTGTTTC+CGG | + | chr4_1:51578841-51578860 | Msa0554320:three_prime_UTR | 30.0% |
| CAATACTATAAAGTGAAGCA+AGG | + | chr4_1:51578916-51578935 | Msa0554320:three_prime_UTR | 30.0% | |
| !! | GTTTCTAAAGTGAGCAAATA+AGG | - | chr4_1:51578950-51578969 | None:intergenic | 30.0% |
| CTAACAATTAGCATCTATAG+AGG | - | chr4_1:51579019-51579038 | None:intergenic | 30.0% | |
| ATGTAATTTGAGTAACCATC+TGG | + | chr4_1:51579050-51579069 | Msa0554320:three_prime_UTR | 30.0% | |
| TGAAAAAGTTACATTCCAGA+TGG | - | chr4_1:51579068-51579087 | None:intergenic | 30.0% | |
| ! | GAGAAAAGAGAGAGTATAAC+CGG | - | chr4_1:51571914-51571933 | None:intergenic | 35.0% |
| !!! | TAACTTGCTGAGATTTTGAC+TGG | - | chr4_1:51572051-51572070 | None:intergenic | 35.0% |
| ATCCTAGATTTCTCAAGATC+TGG | + | chr4_1:51572120-51572139 | Msa0554320:CDS | 35.0% | |
| AACCAGATCTTGAGAAATCT+AGG | - | chr4_1:51572125-51572144 | None:intergenic | 35.0% | |
| TGAGGAACCTTGAAATTGAA+AGG | + | chr4_1:51572797-51572816 | Msa0554320:intron | 35.0% | |
| !!! | GGTTCTCAACTTGGTTTTAT+TGG | + | chr4_1:51572818-51572837 | Msa0554320:intron | 35.0% |
| ! | CACATAAAGTGAAGCATCAT+TGG | - | chr4_1:51572918-51572937 | None:intergenic | 35.0% |
| AGTTAGAATTCCTTGACTCA+TGG | + | chr4_1:51573140-51573159 | Msa0554320:intron | 35.0% | |
| GTTAGAATTCCTTGACTCAT+GGG | + | chr4_1:51573141-51573160 | Msa0554320:intron | 35.0% | |
| TGCTTCAACACAATGTAAAC+TGG | + | chr4_1:51573280-51573299 | Msa0554320:intron | 35.0% | |
| AAAGATTCACTCACTTCTCA+TGG | - | chr4_1:51573334-51573353 | None:intergenic | 35.0% | |
| GAATAGTGAGTGTTTCTTGT+TGG | + | chr4_1:51573371-51573390 | Msa0554320:intron | 35.0% | |
| ! | TAGATCTTGAATGGGGTATT+TGG | + | chr4_1:51573414-51573433 | Msa0554320:intron | 35.0% |
| ! | AGATCTTGAATGGGGTATTT+GGG | + | chr4_1:51573415-51573434 | Msa0554320:intron | 35.0% |
| TATTTGGGTGATACACATCT+TGG | + | chr4_1:51573430-51573449 | Msa0554320:intron | 35.0% | |
| GTTGCTGATATCACAAACAA+CGG | - | chr4_1:51573544-51573563 | None:intergenic | 35.0% | |
| AGCAACTTATAAACACTGAG+AGG | + | chr4_1:51573558-51573577 | Msa0554320:intron | 35.0% | |
| ACTTATAAACACTGAGAGGA+TGG | + | chr4_1:51573562-51573581 | Msa0554320:intron | 35.0% | |
| !! | GAATGTACTGGTTCAATTGA+TGG | - | chr4_1:51573686-51573705 | None:intergenic | 35.0% |
| CGTAATGAAGTAGATGTATC+TGG | - | chr4_1:51573746-51573765 | None:intergenic | 35.0% | |
| !!! | GGTGTGAGATTTTTTGCATT+AGG | + | chr4_1:51574154-51574173 | Msa0554320:intron | 35.0% |
| GAAATGCAGAGCCAATTAAA+TGG | + | chr4_1:51574215-51574234 | Msa0554320:intron | 35.0% | |
| TCGAGCACTAAATCTTATAC+AGG | + | chr4_1:51574687-51574706 | Msa0554320:CDS | 35.0% | |
| TGCATTCTTCAAAGTGGATA+AGG | - | chr4_1:51574721-51574740 | None:intergenic | 35.0% | |
| AGCCTCTTGTGTAAAAAACA+GGG | + | chr4_1:51575318-51575337 | Msa0554320:intron | 35.0% | |
| !!! | TACCCTGTTTTTTACACAAG+AGG | - | chr4_1:51575323-51575342 | None:intergenic | 35.0% |
| TGCGTACAATACACCAAAAA+TGG | + | chr4_1:51575351-51575370 | Msa0554320:intron | 35.0% | |
| GTACAATACACCAAAAATGG+TGG | + | chr4_1:51575354-51575373 | Msa0554320:intron | 35.0% | |
| CATTAAAAAAAAGGGCAACC+CGG | - | chr4_1:51575421-51575440 | None:intergenic | 35.0% | |
| TTATTGGTCCATGTAACTGT+AGG | + | chr4_1:51575470-51575489 | Msa0554320:intron | 35.0% | |
| AACAAGATCCTACAGTTACA+TGG | - | chr4_1:51575481-51575500 | None:intergenic | 35.0% | |
| AAATCGAACGTGCTATGAAA+TGG | + | chr4_1:51575523-51575542 | Msa0554320:intron | 35.0% | |
| AATCGAACGTGCTATGAAAT+GGG | + | chr4_1:51575524-51575543 | Msa0554320:intron | 35.0% | |
| ! | GAACAGTTTCTAGAAGAGTT+AGG | + | chr4_1:51575626-51575645 | Msa0554320:intron | 35.0% |
| ATGGTACTTAATTCCACCTT+TGG | - | chr4_1:51575734-51575753 | None:intergenic | 35.0% | |
| ! | AGGTTTTGCTCAAGTATACA+AGG | + | chr4_1:51575777-51575796 | Msa0554320:CDS | 35.0% |
| !!! | TCAGGTTGCATTTTGAAACT+TGG | + | chr4_1:51575901-51575920 | Msa0554320:intron | 35.0% |
| GATACATGTAAAACTCCCAA+GGG | - | chr4_1:51575947-51575966 | None:intergenic | 35.0% | |
| ! | TTCATAGAAAAGCAGGTTGA+TGG | - | chr4_1:51576075-51576094 | None:intergenic | 35.0% |
| GTAGATGTTCATAGAAAAGC+AGG | - | chr4_1:51576029-51576048 | None:intergenic | 35.0% | |
| CTGACATCTTAATCTTTCAG+AGG | + | chr4_1:51576114-51576133 | Msa0554320:intron | 35.0% | |
| ATCTTTCAGAGGTCAAACTA+TGG | + | chr4_1:51576125-51576144 | Msa0554320:intron | 35.0% | |
| GATGTTGAACGAGATAATGA+GGG | - | chr4_1:51576249-51576268 | None:intergenic | 35.0% | |
| TGATGTTGAACGAGATAATG+AGG | - | chr4_1:51576250-51576269 | None:intergenic | 35.0% | |
| ATCAACTCATATGTGGTCAT+AGG | + | chr4_1:51576311-51576330 | Msa0554320:CDS | 35.0% | |
| TGTGGTCATAGGAAAATTCA+TGG | + | chr4_1:51576322-51576341 | Msa0554320:CDS | 35.0% | |
| ATCTGCTTATTCGTTATGCT+AGG | + | chr4_1:51576441-51576460 | Msa0554320:CDS | 35.0% | |
| ATTATCGAGGTAAAAGGCAA+GGG | - | chr4_1:51576559-51576578 | None:intergenic | 35.0% | |
| AATTATCGAGGTAAAAGGCA+AGG | - | chr4_1:51576560-51576579 | None:intergenic | 35.0% | |
| ! | TTTTCCCCGTCTTAATTTTG+AGG | + | chr4_1:51576626-51576645 | Msa0554320:intron | 35.0% |
| ! | TTTCCCCGTCTTAATTTTGA+GGG | + | chr4_1:51576627-51576646 | Msa0554320:intron | 35.0% |
| ATACCCTCAAAATTAAGACG+GGG | - | chr4_1:51576633-51576652 | None:intergenic | 35.0% | |
| CATACCCTCAAAATTAAGAC+GGG | - | chr4_1:51576634-51576653 | None:intergenic | 35.0% | |
| GCATACCCTCAAAATTAAGA+CGG | - | chr4_1:51576635-51576654 | None:intergenic | 35.0% | |
| GATACTTTACTAGATGCAGA+GGG | - | chr4_1:51576753-51576772 | None:intergenic | 35.0% | |
| TGATACTTTACTAGATGCAG+AGG | - | chr4_1:51576754-51576773 | None:intergenic | 35.0% | |
| CAGTTTCAGGACTAAAATGA+TGG | + | chr4_1:51577173-51577192 | Msa0554320:intron | 35.0% | |
| CTAATTTCTAAGCATCCATG+TGG | + | chr4_1:51577287-51577306 | Msa0554320:intron | 35.0% | |
| ACCACAAATAGCATATATGC+CGG | + | chr4_1:51577330-51577349 | Msa0554320:intron | 35.0% | |
| GTGATGTCTCTAATTGAATC+CGG | - | chr4_1:51577352-51577371 | None:intergenic | 35.0% | |
| CTGGAGTGAAAGTTAAAGTA+TGG | + | chr4_1:51577552-51577571 | Msa0554320:intron | 35.0% | |
| GAGTGAAAGTTAAAGTATGG+TGG | + | chr4_1:51577555-51577574 | Msa0554320:intron | 35.0% | |
| GAAAGTTAAAGTATGGTGGT+AGG | + | chr4_1:51577559-51577578 | Msa0554320:intron | 35.0% | |
| !! | TTTCCACTTTTACTAGCAGA+AGG | + | chr4_1:51577596-51577615 | Msa0554320:intron | 35.0% |
| AATCCTTCTGCTAGTAAAAG+TGG | - | chr4_1:51577602-51577621 | None:intergenic | 35.0% | |
| ! | TCATGGTGTTTTATGACCAT+TGG | + | chr4_1:51577625-51577644 | Msa0554320:intron | 35.0% |
| ! | GTAGCTTTTATCTCAACCAA+TGG | - | chr4_1:51577644-51577663 | None:intergenic | 35.0% |
| CATTCAAATGCACGTCAAAA+CGG | - | chr4_1:51577688-51577707 | None:intergenic | 35.0% | |
| CAATGAGTACTATCCACAAA+TGG | - | chr4_1:51577775-51577794 | None:intergenic | 35.0% | |
| TAATCTCTTTCCAGATCACA+CGG | + | chr4_1:51577984-51578003 | Msa0554320:CDS | 35.0% | |
| TTCTGTTATCACTTGTCAAC+AGG | + | chr4_1:51578149-51578168 | Msa0554320:intron | 35.0% | |
| GATGCTGCATAATACCTATA+TGG | + | chr4_1:51578206-51578225 | Msa0554320:CDS | 35.0% | |
| ! | AAGGTGACCGAATTTTTACT+AGG | - | chr4_1:51578359-51578378 | None:intergenic | 35.0% |
| ! | GATTTTACCAAATCGGTAGA+GGG | - | chr4_1:51578389-51578408 | None:intergenic | 35.0% |
| ! | TGATTTTACCAAATCGGTAG+AGG | - | chr4_1:51578390-51578409 | None:intergenic | 35.0% |
| CAAGCAATCAAAAACAGACT+AGG | + | chr4_1:51578762-51578781 | Msa0554320:three_prime_UTR | 35.0% | |
| CAATCAAAAACAGACTAGGA+AGG | + | chr4_1:51578766-51578785 | Msa0554320:three_prime_UTR | 35.0% | |
| ! | TCCAATGTGAATTTGTTTCC+GGG | + | chr4_1:51578842-51578861 | Msa0554320:three_prime_UTR | 35.0% |
| GCTAATGCATGGCAATTAAA+AGG | - | chr4_1:51578997-51579016 | None:intergenic | 35.0% | |
| GATTGTTAAGTTTCACTCGA+AGG | + | chr4_1:51579129-51579148 | Msa0554320:three_prime_UTR | 35.0% | |
| TTGTGAAAGTGGATGAGTTG+CGG | - | chr4_1:51571860-51571879 | None:intergenic | 40.0% | |
| ! | AGAGAGTATAACCGGAGAAA+GGG | - | chr4_1:51571906-51571925 | None:intergenic | 40.0% |
| AAAATTGTGCGAGTGTGTGA+CGG | - | chr4_1:51571948-51571967 | None:intergenic | 40.0% | |
| ! | ATCTAGGATCATTTCGGTAG+CGG | - | chr4_1:51572109-51572128 | None:intergenic | 40.0% |
| !!! | ATGAGCACATGTTGCTTTTG+AGG | + | chr4_1:51572779-51572798 | Msa0554320:intron | 40.0% |
| CATTTCCAGGTTAGTGCTTT+GGG | + | chr4_1:51573003-51573022 | Msa0554320:intron | 40.0% | |
| TCACTCACTTCTCATGGATT+TGG | - | chr4_1:51573328-51573347 | None:intergenic | 40.0% | |
| ! | AAGGATCTTGTTGATGGGAT+AGG | - | chr4_1:51573661-51573680 | None:intergenic | 40.0% |
| !!! | ACAAAGGCTCCATTTTTTCG+TGG | + | chr4_1:51574101-51574120 | Msa0554320:intron | 40.0% |
| CTCTGCATTTCTGTCAAACA+TGG | - | chr4_1:51574206-51574225 | None:intergenic | 40.0% | |
| TGCAGAGCCAATTAAATGGT+TGG | + | chr4_1:51574219-51574238 | Msa0554320:CDS | 40.0% | |
| GCCAATTAAATGGTTGGAGA+AGG | + | chr4_1:51574225-51574244 | Msa0554320:CDS | 40.0% | |
| GCCTTCTCCAACCATTTAAT+TGG | - | chr4_1:51574229-51574248 | None:intergenic | 40.0% | |
| ATTGAACTGAAACAGGGTTG+AGG | - | chr4_1:51574405-51574424 | None:intergenic | 40.0% | |
| CAAAAGGTCATTCAGAGTAG+AGG | - | chr4_1:51574536-51574555 | None:intergenic | 40.0% | |
| CCTTGATGCATTCTTCAAAG+TGG | - | chr4_1:51574727-51574746 | None:intergenic | 40.0% | |
| ! | CCACTTTGAAGAATGCATCA+AGG | + | chr4_1:51574724-51574743 | Msa0554320:CDS | 40.0% |
| CACCCGATCTCATAACAAAA+TGG | - | chr4_1:51574918-51574937 | None:intergenic | 40.0% | |
| ! | GTGTTGTTAAATAGTGGCCA+TGG | - | chr4_1:51575168-51575187 | None:intergenic | 40.0% |
| ACCTTAATGTCTCGTAACCT+TGG | + | chr4_1:51575244-51575263 | Msa0554320:intron | 40.0% | |
| GTTGTTGTCAAGTGACTGAA+AGG | + | chr4_1:51575280-51575299 | Msa0554320:intron | 40.0% | |
| CAGCCTCTTGTGTAAAAAAC+AGG | + | chr4_1:51575317-51575336 | Msa0554320:intron | 40.0% | |
| ATTTCCATAAGCTGCTTCCT+TGG | + | chr4_1:51575659-51575678 | Msa0554320:CDS | 40.0% | |
| TTAACTGGAACTTTCGTCCA+AGG | - | chr4_1:51575679-51575698 | None:intergenic | 40.0% | |
| TTTAGTGCCACAACTTCATC+AGG | - | chr4_1:51575820-51575839 | None:intergenic | 40.0% | |
| TGATGAAGTTGTGGCACTAA+AGG | + | chr4_1:51575819-51575838 | Msa0554320:CDS | 40.0% | |
| TACAAAAACCAGCTTTCCCT+TGG | + | chr4_1:51575928-51575947 | Msa0554320:CDS | 40.0% | |
| ACAAAAACCAGCTTTCCCTT+GGG | + | chr4_1:51575929-51575948 | Msa0554320:CDS | 40.0% | |
| CGATACATGTAAAACTCCCA+AGG | - | chr4_1:51575948-51575967 | None:intergenic | 40.0% | |
| GGATGTCATCAACTCATATG+TGG | + | chr4_1:51576304-51576323 | Msa0554320:intron | 40.0% | |
| !! | CATGATGTTGGCTTGATTCA+TGG | + | chr4_1:51576401-51576420 | Msa0554320:CDS | 40.0% |
| ATCTTGATGTATTCGGACAG+GGG | - | chr4_1:51576836-51576855 | None:intergenic | 40.0% | |
| GATCTTGATGTATTCGGACA+GGG | - | chr4_1:51576837-51576856 | None:intergenic | 40.0% | |
| AGATCTTGATGTATTCGGAC+AGG | - | chr4_1:51576838-51576857 | None:intergenic | 40.0% | |
| CCATTCTCTCTTTCTATGAG+TGG | - | chr4_1:51576912-51576931 | None:intergenic | 40.0% | |
| CCACTCATAGAAAGAGAGAA+TGG | + | chr4_1:51576909-51576928 | Msa0554320:intron | 40.0% | |
| AGAGAGAATGGAATTTCCAG+TGG | + | chr4_1:51576921-51576940 | Msa0554320:intron | 40.0% | |
| GAGAGAATGGAATTTCCAGT+GGG | + | chr4_1:51576922-51576941 | Msa0554320:intron | 40.0% | |
| TACACTTTCAGGGACCAAAA+TGG | - | chr4_1:51576955-51576974 | None:intergenic | 40.0% | |
| ! | TGTCACTTATGTCCGAAACT+GGG | + | chr4_1:51576981-51577000 | Msa0554320:intron | 40.0% |
| TTGGGTTTATAGCCCAGTTT+CGG | - | chr4_1:51576996-51577015 | None:intergenic | 40.0% | |
| ! | TCAACGTAAGAAGTTGGTTG+TGG | - | chr4_1:51577218-51577237 | None:intergenic | 40.0% |
| GTAGACACAATTATGCCACA+TGG | - | chr4_1:51577305-51577324 | None:intergenic | 40.0% | |
| ! | TCCGGCATATATGCTATTTG+TGG | - | chr4_1:51577334-51577353 | None:intergenic | 40.0% |
| !!! | GCTGCACTAGTTTTGTAAGA+GGG | - | chr4_1:51577408-51577427 | None:intergenic | 40.0% |
| !!! | TGCTGCACTAGTTTTGTAAG+AGG | - | chr4_1:51577409-51577428 | None:intergenic | 40.0% |
| !! | CTTCAAAAGCATCTACTGAG+AGG | - | chr4_1:51577513-51577532 | None:intergenic | 40.0% |
| CTAGCAGAAGGATTTACTCA+TGG | + | chr4_1:51577608-51577627 | Msa0554320:intron | 40.0% | |
| ! | GCTTAGATGATTGCCATTTG+TGG | + | chr4_1:51577759-51577778 | Msa0554320:intron | 40.0% |
| TCCAGATCACACGGTATTTA+AGG | + | chr4_1:51577993-51578012 | Msa0554320:CDS | 40.0% | |
| CCAGATCACACGGTATTTAA+GGG | + | chr4_1:51577994-51578013 | Msa0554320:CDS | 40.0% | |
| CGGTATTTAAGGGAGATTGT+AGG | + | chr4_1:51578004-51578023 | Msa0554320:CDS | 40.0% | |
| ! | TTTTCGATGCATTGAGATGC+AGG | + | chr4_1:51578035-51578054 | Msa0554320:CDS | 40.0% |
| TGACTCACCTGAAATTTCCA+CGG | - | chr4_1:51578069-51578088 | None:intergenic | 40.0% | |
| TTCCCAGACTACCCTTTAAA+CGG | + | chr4_1:51578271-51578290 | Msa0554320:CDS | 40.0% | |
| TACCGTTTAAAGGGTAGTCT+GGG | - | chr4_1:51578276-51578295 | None:intergenic | 40.0% | |
| ATACCGTTTAAAGGGTAGTC+TGG | - | chr4_1:51578277-51578296 | None:intergenic | 40.0% | |
| GGGACCTCCTAGTAAAAATT+CGG | + | chr4_1:51578349-51578368 | Msa0554320:intron | 40.0% | |
| ! | GTGACCGAATTTTTACTAGG+AGG | - | chr4_1:51578356-51578375 | None:intergenic | 40.0% |
| AAGATGCTTAATGACTACCC+TGG | + | chr4_1:51578535-51578554 | Msa0554320:CDS | 40.0% | |
| GCAACAACTTCCTATCATCA+TGG | - | chr4_1:51578561-51578580 | None:intergenic | 40.0% | |
| TGATGATAGGAAGTTGTTGC+AGG | + | chr4_1:51578561-51578580 | Msa0554320:CDS | 40.0% | |
| TCCCGGAAACAAATTCACAT+TGG | - | chr4_1:51578846-51578865 | None:intergenic | 40.0% | |
| CATCTATAGAGGCTAATGCA+TGG | - | chr4_1:51579008-51579027 | None:intergenic | 40.0% | |
| ATCCTCTCTTACCCTTTCTC+CGG | + | chr4_1:51571892-51571911 | Msa0554320:CDS | 45.0% | |
| ! | GAGAGAGTATAACCGGAGAA+AGG | - | chr4_1:51571907-51571926 | None:intergenic | 45.0% |
| !!! | ATTTTGACTGGAGGAAGTGG+TGG | - | chr4_1:51572039-51572058 | None:intergenic | 45.0% |
| !!! | GAGATTTTGACTGGAGGAAG+TGG | - | chr4_1:51572042-51572061 | None:intergenic | 45.0% |
| !!! | CTTGCTGAGATTTTGACTGG+AGG | - | chr4_1:51572048-51572067 | None:intergenic | 45.0% |
| GCTGACACCATCTATAAGCT+CGG | + | chr4_1:51572980-51572999 | Msa0554320:CDS | 45.0% | |
| GGAAATGCCGAGCTTATAGA+TGG | - | chr4_1:51572990-51573009 | None:intergenic | 45.0% | |
| TCTATAAGCTCGGCATTTCC+AGG | + | chr4_1:51572990-51573009 | Msa0554320:CDS | 45.0% | |
| GCATTTCCAGGTTAGTGCTT+TGG | + | chr4_1:51573002-51573021 | Msa0554320:intron | 45.0% | |
| ! | TGTTACCCAAAGCACTAACC+TGG | - | chr4_1:51573011-51573030 | None:intergenic | 45.0% |
| TGTGTGTTTCCCATGAGTCA+AGG | - | chr4_1:51573153-51573172 | None:intergenic | 45.0% | |
| ! | ACTGGTTTCATGAAACACCG+AGG | + | chr4_1:51573298-51573317 | Msa0554320:intron | 45.0% |
| ! | CTCATGGATTTGGAATGCCT+CGG | - | chr4_1:51573318-51573337 | None:intergenic | 45.0% |
| TGGGCAAGGATCTTGTTGAT+GGG | - | chr4_1:51573666-51573685 | None:intergenic | 45.0% | |
| ATGGGCAAGGATCTTGTTGA+TGG | - | chr4_1:51573667-51573686 | None:intergenic | 45.0% | |
| ! | ACTGGTTCAATTGATGGGCA+AGG | - | chr4_1:51573680-51573699 | None:intergenic | 45.0% |
| TGTTGGATGATCAGTTCAGC+TGG | - | chr4_1:51573816-51573835 | None:intergenic | 45.0% | |
| TTAGAGGGTTTACGTAGACG+TGG | + | chr4_1:51574068-51574087 | Msa0554320:intron | 45.0% | |
| AACAGGGTTGAGGAAACAAG+TGG | - | chr4_1:51574395-51574414 | None:intergenic | 45.0% | |
| AGAGGGCAAAAAATCTGCCA+TGG | + | chr4_1:51575148-51575167 | Msa0554320:intron | 45.0% | |
| GCCAAGGTTACGAGACATTA+AGG | - | chr4_1:51575248-51575267 | None:intergenic | 45.0% | |
| ! | CAACTTTATCGATTGCGCCA+AGG | - | chr4_1:51575264-51575283 | None:intergenic | 45.0% |
| GTCAAGTGACTGAAAGGTCA+CGG | + | chr4_1:51575286-51575305 | Msa0554320:intron | 45.0% | |
| TCAAGTGACTGAAAGGTCAC+GGG | + | chr4_1:51575287-51575306 | Msa0554320:intron | 45.0% | |
| ! | GCTCTTGTTTGTCCTTGTCA+TGG | + | chr4_1:51575705-51575724 | Msa0554320:CDS | 45.0% |
| CAGTGATCCTGATGAAGTTG+TGG | + | chr4_1:51575810-51575829 | Msa0554320:CDS | 45.0% | |
| AGTTGTGGCACTAAAGGTGA+TGG | + | chr4_1:51575825-51575844 | Msa0554320:intron | 45.0% | |
| TAAAACTCCCAAGGGAAAGC+TGG | - | chr4_1:51575939-51575958 | None:intergenic | 45.0% | |
| ! | TTTAGCTCATGGGACACTAC+AGG | + | chr4_1:51576202-51576221 | Msa0554320:CDS | 45.0% |
| CAAAATGGTGGTTTACCCAC+TGG | - | chr4_1:51576940-51576959 | None:intergenic | 45.0% | |
| ! | CAGTGGGTAAACCACCATTT+TGG | + | chr4_1:51576938-51576957 | Msa0554320:intron | 45.0% |
| ACTTTCAGGGACCAAAATGG+TGG | - | chr4_1:51576952-51576971 | None:intergenic | 45.0% | |
| GACAGCATCGTACACTTTCA+GGG | - | chr4_1:51576965-51576984 | None:intergenic | 45.0% | |
| TGACAGCATCGTACACTTTC+AGG | - | chr4_1:51576966-51576985 | None:intergenic | 45.0% | |
| ! | CTGTCACTTATGTCCGAAAC+TGG | + | chr4_1:51576980-51576999 | Msa0554320:intron | 45.0% |
| ! | ACTGTAGTGTGCTGTCACTT+TGG | - | chr4_1:51577157-51577176 | None:intergenic | 45.0% |
| TGACAGCACACTACAGTTTC+AGG | + | chr4_1:51577160-51577179 | Msa0554320:intron | 45.0% | |
| CTAAGAACCCATCTTCTGTG+AGG | - | chr4_1:51577821-51577840 | None:intergenic | 45.0% | |
| CCCTTAAATACCGTGTGATC+TGG | - | chr4_1:51577997-51578016 | None:intergenic | 45.0% | |
| AAGGGAGATTGTAGGACTTC+TGG | + | chr4_1:51578012-51578031 | Msa0554320:CDS | 45.0% | |
| TGTCAACAGGCAGATGCATA+TGG | + | chr4_1:51578162-51578181 | Msa0554320:intron | 45.0% | |
| TCGTATGAACAACACCGCAA+AGG | - | chr4_1:51578188-51578207 | None:intergenic | 45.0% | |
| ATCGGTAGAGGGAGACTAAA+AGG | - | chr4_1:51578378-51578397 | None:intergenic | 45.0% | |
| ! | TTAGTCTCCCTCTACCGATT+TGG | + | chr4_1:51578379-51578398 | Msa0554320:intron | 45.0% |
| ACTTCCTATCATCATGGCCA+GGG | - | chr4_1:51578555-51578574 | None:intergenic | 45.0% | |
| AACTTCCTATCATCATGGCC+AGG | - | chr4_1:51578556-51578575 | None:intergenic | 45.0% | |
| GGAATTGAAGAAGTCCTTCC+AGG | + | chr4_1:51578582-51578601 | Msa0554320:CDS | 45.0% | |
| AGAGCTGATATAGTCCTGGA+AGG | - | chr4_1:51578599-51578618 | None:intergenic | 45.0% | |
| GATCAGAGCTGATATAGTCC+TGG | - | chr4_1:51578603-51578622 | None:intergenic | 45.0% | |
| ! | AGGAGCATGTGATGGAAAAC+AGG | - | chr4_1:51578803-51578822 | None:intergenic | 45.0% |
| CATCACATGCTCCTTAGTCA+CGG | + | chr4_1:51578809-51578828 | Msa0554320:three_prime_UTR | 45.0% | |
| ! | AAGAGTCTTGTCCGTGACTA+AGG | - | chr4_1:51578823-51578842 | None:intergenic | 45.0% |
| !! | CTATTATTATTATTATTATT+AGG | + | chr4_1:51572463-51572482 | Msa0554320:intron | 5.0% |
| TGAAAGTGGATGAGTTGCGG+AGG | - | chr4_1:51571857-51571876 | None:intergenic | 50.0% | |
| TAAGAGAGGATCGTCAACGG+CGG | - | chr4_1:51571883-51571902 | None:intergenic | 50.0% | |
| GGGTAAGAGAGGATCGTCAA+CGG | - | chr4_1:51571886-51571905 | None:intergenic | 50.0% | |
| AACCGGAGAAAGGGTAAGAG+AGG | - | chr4_1:51571897-51571916 | None:intergenic | 50.0% | |
| GTTTGAACGGTTTGCCAGCT+TGG | + | chr4_1:51572751-51572770 | Msa0554320:intron | 50.0% | |
| TCCGAACCTGTGCAACTTAC+AGG | + | chr4_1:51573496-51573515 | Msa0554320:intron | 50.0% | |
| CCCTGTAAGTTGCACAGGTT+CGG | - | chr4_1:51573500-51573519 | None:intergenic | 50.0% | |
| CCGAACCTGTGCAACTTACA+GGG | + | chr4_1:51573497-51573516 | Msa0554320:intron | 50.0% | |
| CTTCTCCCTGTAAGTTGCAC+AGG | - | chr4_1:51573505-51573524 | None:intergenic | 50.0% | |
| TTTACGTAGACGTGGCCTGA+AGG | + | chr4_1:51574076-51574095 | Msa0554320:intron | 50.0% | |
| ATGGAGCCTTTGTCACCTTC+AGG | - | chr4_1:51574094-51574113 | None:intergenic | 50.0% | |
| CAAGGTTGCTTCAAGCCAGA+AGG | + | chr4_1:51574285-51574304 | Msa0554320:CDS | 50.0% | |
| !! | TTCAGAGTAGAGGCATCCCA+TGG | - | chr4_1:51574526-51574545 | None:intergenic | 50.0% |
| CTAAAGCTCCCGCATACGTA+GGG | - | chr4_1:51575394-51575413 | None:intergenic | 50.0% | |
| ACTAAAGCTCCCGCATACGT+AGG | - | chr4_1:51575395-51575414 | None:intergenic | 50.0% | |
| TCGTCCAAGGAAGCAGCTTA+TGG | - | chr4_1:51575666-51575685 | None:intergenic | 50.0% | |
| GTCCTTGTCATGGCATCCAA+AGG | + | chr4_1:51575715-51575734 | Msa0554320:CDS | 50.0% | |
| CACCTTTGGATGCCATGACA+AGG | - | chr4_1:51575720-51575739 | None:intergenic | 50.0% | |
| CTTGTCATGGCATCCAAAGG+TGG | + | chr4_1:51575718-51575737 | Msa0554320:CDS | 50.0% | |
| TACCATATCAAGGGCTGTGC+TGG | + | chr4_1:51575748-51575767 | Msa0554320:CDS | 50.0% | |
| ! | TGTGGCACTAAAGGTGATGG+CGG | + | chr4_1:51575828-51575847 | Msa0554320:intron | 50.0% |
| AGGGGTAACCTCACAGAAGA+TGG | + | chr4_1:51577810-51577829 | Msa0554320:intron | 50.0% | |
| GGGGTAACCTCACAGAAGAT+GGG | + | chr4_1:51577811-51577830 | Msa0554320:intron | 50.0% | |
| ! | GATGGGTTCTTAGACCGAAG+CGG | + | chr4_1:51577828-51577847 | Msa0554320:CDS | 50.0% |
| TCTTAGACCGAAGCGGTTGT+TGG | + | chr4_1:51577835-51577854 | Msa0554320:CDS | 50.0% | |
| GATCATGCCAACAACCGCTT+CGG | - | chr4_1:51577845-51577864 | None:intergenic | 50.0% | |
| AAGCGGTTGTTGGCATGATC+AGG | + | chr4_1:51577845-51577864 | Msa0554320:CDS | 50.0% | |
| ! | AGGGTCTCTGTCTTGTTGAC+TGG | + | chr4_1:51577944-51577963 | Msa0554320:intron | 50.0% |
| ! | GGGTCTCTGTCTTGTTGACT+GGG | + | chr4_1:51577945-51577964 | Msa0554320:intron | 50.0% |
| ! | GGTCTCTGTCTTGTTGACTG+GGG | + | chr4_1:51577946-51577965 | Msa0554320:CDS | 50.0% |
| ! | TGTCTTGTTGACTGGGGAAG+AGG | + | chr4_1:51577952-51577971 | Msa0554320:CDS | 50.0% |
| ! | GTCTTGTTGACTGGGGAAGA+GGG | + | chr4_1:51577953-51577972 | Msa0554320:CDS | 50.0% |
| TCGATGCATTGAGATGCAGG+AGG | + | chr4_1:51578038-51578057 | Msa0554320:CDS | 50.0% | |
| GCATTGAGATGCAGGAGGAT+AGG | + | chr4_1:51578043-51578062 | Msa0554320:CDS | 50.0% | |
| GGATAGGCCGTGGAAATTTC+AGG | + | chr4_1:51578059-51578078 | Msa0554320:CDS | 50.0% | |
| GCAGATGCATATGGCCTTTG+CGG | + | chr4_1:51578171-51578190 | Msa0554320:CDS | 50.0% | |
| ACAAAAGGAAGGGTCTGCTG+TGG | - | chr4_1:51578430-51578449 | None:intergenic | 50.0% | |
| GTTACTGGAACGTCGAGCTA+TGG | + | chr4_1:51578497-51578516 | Msa0554320:intron | 50.0% | |
| ACTACCCTGGCCATGATGAT+AGG | + | chr4_1:51578548-51578567 | Msa0554320:CDS | 50.0% | |
| AGGAGTTACTCGCGAAGCAA+AGG | + | chr4_1:51578644-51578663 | Msa0554320:CDS | 50.0% | |
| GGAGTTACTCGCGAAGCAAA+GGG | + | chr4_1:51578645-51578664 | Msa0554320:CDS | 50.0% | |
| CATAGACAGCTCAGCAGAAG+TGG | - | chr4_1:51578712-51578731 | None:intergenic | 50.0% | |
| ! | CGTGACTAAGGAGCATGTGA+TGG | - | chr4_1:51578811-51578830 | None:intergenic | 50.0% |
| GTCAACGGCGGTTGTGAAAG+TGG | - | chr4_1:51571871-51571890 | None:intergenic | 55.0% | |
| TGTGCTCATCACGTCCAAGC+TGG | - | chr4_1:51572768-51572787 | None:intergenic | 55.0% | |
| ACGTGGCCTGAAGGTGACAA+AGG | + | chr4_1:51574085-51574104 | Msa0554320:intron | 55.0% | |
| ! | GGAAGGGGTCCCACCATTTT+TGG | - | chr4_1:51575367-51575386 | None:intergenic | 55.0% |
| ! | AAAATGGTGGGACCCCTTCC+CGG | + | chr4_1:51575367-51575386 | Msa0554320:intron | 55.0% |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | + | chr4_1:51575399-51575418 | Msa0554320:intron | 55.0% |
| GTCCAGCACAGCCCTTGATA+TGG | - | chr4_1:51575753-51575772 | None:intergenic | 55.0% | |
| TATCAAGGGCTGTGCTGGAC+AGG | + | chr4_1:51575753-51575772 | Msa0554320:CDS | 55.0% | |
| ATCAAGGGCTGTGCTGGACA+GGG | + | chr4_1:51575754-51575773 | Msa0554320:CDS | 55.0% | |
| CATACGTAGGGTCCGGGAAG+GGG | - | chr4_1:51575382-51575401 | None:intergenic | 60.0% | |
| GCATACGTAGGGTCCGGGAA+GGG | - | chr4_1:51575383-51575402 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTACGTATG+CGG | + | chr4_1:51575382-51575401 | Msa0554320:intron | 60.0% | |
| TTCCCGGACCCTACGTATGC+GGG | + | chr4_1:51575383-51575402 | Msa0554320:intron | 60.0% | |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | + | chr4_1:51575400-51575419 | Msa0554320:intron | 60.0% |
| AGATGCAGGAGGATAGGCCG+TGG | + | chr4_1:51578049-51578068 | Msa0554320:CDS | 60.0% | |
| ACACTTGCATGTGCGCGTCC+CGG | - | chr4_1:51578863-51578882 | None:intergenic | 60.0% | |
| ! | TGAGTTGCGGAGGAGCGTGG+TGG | - | chr4_1:51571847-51571866 | None:intergenic | 65.0% |
| GGATGAGTTGCGGAGGAGCG+TGG | - | chr4_1:51571850-51571869 | None:intergenic | 65.0% | |
| CGCATACGTAGGGTCCGGGA+AGG | - | chr4_1:51575384-51575403 | None:intergenic | 65.0% | |
| CTCCCGCATACGTAGGGTCC+GGG | - | chr4_1:51575388-51575407 | None:intergenic | 65.0% | |
| GCTCCCGCATACGTAGGGTC+CGG | - | chr4_1:51575389-51575408 | None:intergenic | 65.0% | |
| AAGGGCTGTGCTGGACAGGG+AGG | + | chr4_1:51575757-51575776 | Msa0554320:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 51571823 | 51579179 | 51571823 | ID=Msa0554320;Name=Msa0554320 |
| chr4_1 | mRNA | 51571823 | 51579179 | 51571823 | ID=Msa0554320-mRNA-1;Parent=Msa0554320;Name=Msa0554320-mRNA-1;_AED=0.12;_eAED=0.12;_QI=17|0.92|0.92|1|1|1|14|492|564 |
| chr4_1 | exon | 51571823 | 51571913 | 51571823 | ID=Msa0554320-mRNA-1:exon:14769;Parent=Msa0554320-mRNA-1 |
| chr4_1 | exon | 51572010 | 51572151 | 51572010 | ID=Msa0554320-mRNA-1:exon:14770;Parent=Msa0554320-mRNA-1 |
| chr4_1 | exon | 51572854 | 51573011 | 51572854 | ID=Msa0554320-mRNA-1:exon:14771;Parent=Msa0554320-mRNA-1 |
| chr4_1 | exon | 51574216 | 51574306 | 51574216 | ID=Msa0554320-mRNA-1:exon:14772;Parent=Msa0554320-mRNA-1 |
| chr4_1 | exon | 51574478 | 51574588 | 51574478 | ID=Msa0554320-mRNA-1:exon:14773;Parent=Msa0554320-mRNA-1 |
| chr4_1 | exon | 51574678 | 51574765 | 51574678 | ID=Msa0554320-mRNA-1:exon:14774;Parent=Msa0554320-mRNA-1 |
| chr4_1 | exon | 51575632 | 51575840 | 51575632 | ID=Msa0554320-mRNA-1:exon:14775;Parent=Msa0554320-mRNA-1 |
| chr4_1 | exon | 51575927 | 51575998 | 51575927 | ID=Msa0554320-mRNA-1:exon:14776;Parent=Msa0554320-mRNA-1 |
| chr4_1 | exon | 51576134 | 51576223 | 51576134 | ID=Msa0554320-mRNA-1:exon:14777;Parent=Msa0554320-mRNA-1 |
| chr4_1 | exon | 51576305 | 51576462 | 51576305 | ID=Msa0554320-mRNA-1:exon:14778;Parent=Msa0554320-mRNA-1 |
| chr4_1 | exon | 51577812 | 51577866 | 51577812 | ID=Msa0554320-mRNA-1:exon:14779;Parent=Msa0554320-mRNA-1 |
| chr4_1 | exon | 51577946 | 51578080 | 51577946 | ID=Msa0554320-mRNA-1:exon:14780;Parent=Msa0554320-mRNA-1 |
| chr4_1 | exon | 51578171 | 51578292 | 51578171 | ID=Msa0554320-mRNA-1:exon:14781;Parent=Msa0554320-mRNA-1 |
| chr4_1 | exon | 51578498 | 51579179 | 51578498 | ID=Msa0554320-mRNA-1:exon:14782;Parent=Msa0554320-mRNA-1 |
| chr4_1 | five_prime_UTR | 51571823 | 51571839 | 51571823 | ID=Msa0554320-mRNA-1:five_prime_utr;Parent=Msa0554320-mRNA-1 |
| chr4_1 | CDS | 51571840 | 51571913 | 51571840 | ID=Msa0554320-mRNA-1:cds;Parent=Msa0554320-mRNA-1 |
| chr4_1 | CDS | 51572010 | 51572151 | 51572010 | ID=Msa0554320-mRNA-1:cds;Parent=Msa0554320-mRNA-1 |
| chr4_1 | CDS | 51572854 | 51573011 | 51572854 | ID=Msa0554320-mRNA-1:cds;Parent=Msa0554320-mRNA-1 |
| chr4_1 | CDS | 51574216 | 51574306 | 51574216 | ID=Msa0554320-mRNA-1:cds;Parent=Msa0554320-mRNA-1 |
| chr4_1 | CDS | 51574478 | 51574588 | 51574478 | ID=Msa0554320-mRNA-1:cds;Parent=Msa0554320-mRNA-1 |
| chr4_1 | CDS | 51574678 | 51574765 | 51574678 | ID=Msa0554320-mRNA-1:cds;Parent=Msa0554320-mRNA-1 |
| chr4_1 | CDS | 51575632 | 51575840 | 51575632 | ID=Msa0554320-mRNA-1:cds;Parent=Msa0554320-mRNA-1 |
| chr4_1 | CDS | 51575927 | 51575998 | 51575927 | ID=Msa0554320-mRNA-1:cds;Parent=Msa0554320-mRNA-1 |
| chr4_1 | CDS | 51576134 | 51576223 | 51576134 | ID=Msa0554320-mRNA-1:cds;Parent=Msa0554320-mRNA-1 |
| chr4_1 | CDS | 51576305 | 51576462 | 51576305 | ID=Msa0554320-mRNA-1:cds;Parent=Msa0554320-mRNA-1 |
| chr4_1 | CDS | 51577812 | 51577866 | 51577812 | ID=Msa0554320-mRNA-1:cds;Parent=Msa0554320-mRNA-1 |
| chr4_1 | CDS | 51577946 | 51578080 | 51577946 | ID=Msa0554320-mRNA-1:cds;Parent=Msa0554320-mRNA-1 |
| chr4_1 | CDS | 51578171 | 51578292 | 51578171 | ID=Msa0554320-mRNA-1:cds;Parent=Msa0554320-mRNA-1 |
| chr4_1 | CDS | 51578498 | 51578687 | 51578498 | ID=Msa0554320-mRNA-1:cds;Parent=Msa0554320-mRNA-1 |
| chr4_1 | three_prime_UTR | 51578688 | 51579179 | 51578688 | ID=Msa0554320-mRNA-1:three_prime_utr;Parent=Msa0554320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
