AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1148630

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1148630 MtrunA17_Chr7g0238581 91.867 664 27 1 1 664 1 637 0.0 1248
Msa1148630 MtrunA17_Chr6g0470541 35.498 462 242 14 25 485 5 411 9.98e-66 233
Msa1148630 MtrunA17_Chr6g0470541 40.164 122 64 4 539 656 784 900 5.27e-17 85.5
Msa1148630 MtrunA17_Chr3g0132921 31.643 414 202 11 19 396 3 371 2.73e-52 189
Msa1148630 MtrunA17_Chr5g0427481 31.472 394 193 10 19 380 11 359 8.19e-48 182
Msa1148630 MtrunA17_Chr3g0134191 31.579 399 187 13 26 380 9 365 8.26e-48 181
Msa1148630 MtrunA17_Chr1g0182151 30.808 396 209 13 13 380 41 399 3.44e-47 179
Msa1148630 MtrunA17_Chr1g0153061 31.172 401 186 12 26 380 9 365 1.22e-46 177
Msa1148630 MtrunA17_Chr1g0178411 29.897 388 200 10 26 380 14 362 6.43e-45 172
Msa1148630 MtrunA17_Chr7g0266631 29.688 384 206 9 26 380 10 358 1.01e-44 172
Msa1148630 MtrunA17_Chr2g0327581 30.343 379 205 10 26 380 50 393 3.33e-44 170
Msa1148630 MtrunA17_Chr4g0053211 30.198 404 190 11 26 380 13 373 9.09e-44 169
Msa1148630 MtrunA17_Chr2g0307481 31.707 410 227 14 6 396 41 416 4.33e-42 162
Msa1148630 MtrunA17_Chr2g0331761 31.892 370 198 15 22 379 182 509 1.56e-40 158
Msa1148630 MtrunA17_Chr4g0062291 34.409 372 187 16 24 376 122 455 3.76e-40 157
Msa1148630 MtrunA17_Chr6g0485471 32.703 370 193 15 23 379 113 439 6.46e-40 155
Msa1148630 MtrunA17_Chr1g0191181 29.949 394 216 10 26 402 89 439 2.13e-38 150
Msa1148630 MtrunA17_Chr4g0067421 30.130 385 208 13 16 379 196 540 5.64e-38 151
Msa1148630 MtrunA17_Chr8g0369881 30.685 365 203 9 25 380 875 1198 7.53e-38 151
Msa1148630 MtrunA17_Chr5g0411971 30.748 361 203 10 26 378 400 721 1.01e-37 150
Msa1148630 MtrunA17_Chr5g0421591 30.471 361 204 10 26 378 375 696 2.34e-37 149
Msa1148630 MtrunA17_Chr5g0421521 30.471 361 204 10 26 378 375 696 4.87e-37 148
Msa1148630 MtrunA17_Chr5g0407791 31.165 369 196 10 25 380 889 1212 6.08e-37 148
Msa1148630 MtrunA17_Chr2g0295881 29.574 399 207 14 23 387 195 553 8.54e-37 147
Msa1148630 MtrunA17_Chr3g0142261 30.851 376 207 10 17 379 8 343 8.87e-37 148
Msa1148630 MtrunA17_Chr5g0398521 29.124 388 205 10 25 382 57 404 3.04e-36 145
Msa1148630 MtrunA17_Chr3g0145071 27.649 387 215 10 8 382 87 420 5.11e-36 145
Msa1148630 MtrunA17_Chr1g0152231 28.947 380 207 9 23 382 1 337 8.54e-36 144
Msa1148630 MtrunA17_Chr7g0245931 29.101 378 217 11 25 382 52 398 9.93e-36 144
Msa1148630 MtrunA17_Chr4g0035661 28.986 345 197 9 53 382 99 410 1.16e-35 144
Msa1148630 MtrunA17_Chr4g0049011 29.787 376 196 11 26 374 280 614 2.10e-35 142
Msa1148630 MtrunA17_Chr3g0122121 28.351 388 205 9 22 380 95 438 4.64e-35 142
Msa1148630 MtrunA17_Chr7g0258991 29.444 360 208 10 34 378 64 392 5.97e-35 142
Msa1148630 MtrunA17_Chr7g0272871 30.831 373 208 12 17 378 118 451 7.16e-35 141
Msa1148630 MtrunA17_Chr2g0312631 30.685 365 201 10 26 378 385 709 2.38e-34 140
Msa1148630 MtrunA17_Chr1g0191851 31.129 363 201 11 26 378 148 471 9.66e-34 137
Msa1148630 MtrunA17_Chr4g0045381 29.551 379 203 9 26 380 194 532 6.54e-33 136
Msa1148630 MtrunA17_Chr5g0405181 27.487 382 206 10 25 390 20 346 6.70e-33 135
Msa1148630 MtrunA17_Chr4g0036001 29.107 347 191 9 25 360 24 326 1.80e-32 134
Msa1148630 MtrunA17_Chr8g0372171 27.941 408 234 12 25 417 19 381 2.72e-32 134
Msa1148630 MtrunA17_Chr8g0377731 27.885 416 214 12 5 380 23 392 3.41e-32 134
Msa1148630 MtrunA17_Chr2g0322291 28.109 402 207 12 9 380 78 427 4.10e-32 133
Msa1148630 MtrunA17_Chr7g0271961 30.495 364 192 13 26 374 402 719 4.86e-32 133
Msa1148630 MtrunA17_Chr4g0042061 29.759 373 201 10 26 374 433 768 8.40e-32 132
Msa1148630 MtrunA17_Chr4g0069141 28.496 379 207 10 26 380 154 492 1.68e-31 132
Msa1148630 MtrunA17_Chr2g0280421 30.027 373 207 11 26 383 438 771 2.94e-31 130
Msa1148630 MtrunA17_Chr1g0193221 28.080 349 200 10 79 404 39 359 3.05e-31 130
Msa1148630 MtrunA17_Chr1g0195111 28.989 376 194 12 26 373 397 727 3.51e-30 127
Msa1148630 MtrunA17_Chr6g0483701 30.541 370 198 12 25 380 30 354 1.08e-29 125
Msa1148630 MtrunA17_Chr3g0102921 30.851 376 193 13 26 374 439 774 1.27e-29 125
Msa1148630 MtrunA17_Chr1g0192481 29.245 318 182 7 93 397 115 402 6.28e-29 122
Msa1148630 MtrunA17_Chr5g0447041 29.064 406 190 13 26 374 435 799 9.71e-29 122
Msa1148630 MtrunA17_Chr2g0319271 28.030 396 215 11 26 388 400 758 1.01e-28 122
Msa1148630 MtrunA17_Chr4g0070001 28.378 370 210 11 21 380 139 463 1.93e-28 122
Msa1148630 MtrunA17_Chr7g0257301 28.889 450 227 18 26 430 393 794 5.52e-26 114
Msa1148630 MtrunA17_Chr8g0386891 40.678 177 75 4 200 374 4 152 2.74e-25 108
Msa1148630 MtrunA17_Chr3g0101021 25.307 407 233 13 6 380 43 410 8.96e-24 107
Msa1148630 MtrunA17_Chr5g0445211 26.877 413 212 16 3 380 54 411 5.70e-22 101
Msa1148630 MtrunA17_Chr1g0187411 23.833 407 209 13 10 378 125 468 2.73e-21 99.0
Msa1148630 MtrunA17_Chr8g0367581 26.519 362 207 15 26 377 147 459 6.77e-19 91.7
Msa1148630 MtrunA17_Chr6g0484501 34.831 178 86 3 199 374 33 182 1.21e-16 80.1
Msa1148630 MtrunA17_Chr8g0390991 35.955 178 84 4 199 374 3 152 3.62e-16 82.0
Msa1148630 MtrunA17_Chr3g0142841 25.796 314 173 12 94 383 157 434 3.67e-16 82.8
Msa1148630 MtrunA17_Chr7g0269681 33.862 189 86 5 196 373 37 197 5.51e-16 81.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1148630 AT5G02370.1 53.213 607 225 12 8 601 4 564 0.0 560
Msa1148630 AT5G23910.2 37.793 299 148 8 77 374 57 318 3.88e-52 192
Msa1148630 AT5G23910.2 52.381 84 40 0 572 655 622 705 5.22e-19 92.0
Msa1148630 AT5G23910.1 37.793 299 148 8 77 374 53 314 4.72e-52 191
Msa1148630 AT5G23910.1 52.381 84 40 0 572 655 618 701 5.15e-19 92.0
Msa1148630 AT5G60930.2 30.905 398 190 10 26 380 7 362 2.13e-48 184
Msa1148630 AT5G60930.3 30.905 398 190 10 26 380 7 362 2.58e-48 184
Msa1148630 AT5G60930.1 30.905 398 190 10 26 380 7 362 3.09e-48 183
Msa1148630 AT5G47820.2 30.769 403 189 12 26 380 12 372 3.80e-48 182
Msa1148630 AT5G47820.1 30.769 403 189 12 26 380 12 372 3.80e-48 182
Msa1148630 AT3G50240.1 31.311 412 184 12 26 387 26 388 7.58e-48 182
Msa1148630 AT3G50240.4 31.311 412 184 12 26 387 26 388 7.59e-48 182
Msa1148630 AT3G50240.2 31.311 412 184 12 26 387 26 388 7.92e-48 181
Msa1148630 AT2G28620.3 30.827 399 203 12 16 380 35 394 9.87e-47 178
Msa1148630 AT2G28620.2 30.827 399 203 12 16 380 35 394 9.87e-47 178
Msa1148630 AT2G28620.1 30.827 399 203 12 16 380 35 394 1.07e-46 178
Msa1148630 AT3G49650.1 34.060 367 196 9 28 382 17 349 4.86e-45 172
Msa1148630 AT3G45850.2 29.504 383 203 10 26 380 56 399 1.32e-44 172
Msa1148630 AT3G45850.1 29.504 383 203 10 26 380 56 399 1.32e-44 172
Msa1148630 AT2G37420.1 30.233 387 211 11 26 388 49 400 3.83e-43 167
Msa1148630 AT2G37420.2 30.233 387 211 11 26 388 49 400 3.83e-43 167
Msa1148630 AT2G36200.1 29.381 388 202 9 26 380 13 361 6.65e-43 167
Msa1148630 AT2G36200.2 29.381 388 202 9 26 380 13 361 1.01e-42 166
Msa1148630 AT3G16060.1 32.258 372 194 16 22 379 166 493 1.67e-42 164
Msa1148630 AT1G18550.1 33.514 370 196 12 22 376 148 482 4.16e-41 160
Msa1148630 AT1G12430.2 30.170 411 218 11 25 406 70 440 6.26e-41 160
Msa1148630 AT1G12430.1 30.170 411 218 11 25 406 70 440 6.59e-41 160
Msa1148630 AT2G22610.1 30.941 404 221 15 26 418 418 774 4.93e-40 158
Msa1148630 AT2G22610.2 30.941 404 221 15 26 418 418 774 5.15e-40 158
Msa1148630 AT2G22610.3 30.941 404 221 15 26 418 419 775 5.70e-40 158
Msa1148630 AT3G63480.2 30.513 390 212 10 23 391 1 352 1.04e-39 152
Msa1148630 AT5G27950.1 32.880 368 189 12 26 378 80 404 9.41e-39 152
Msa1148630 AT3G16630.2 31.186 388 205 14 12 379 182 527 2.38e-38 152
Msa1148630 AT3G16630.1 31.186 388 205 14 12 379 182 527 2.38e-38 152
Msa1148630 AT5G65930.1 28.788 396 227 11 25 410 887 1237 2.45e-38 153
Msa1148630 AT5G65930.3 28.788 396 227 11 25 410 894 1244 2.46e-38 153
Msa1148630 AT5G65930.2 28.788 396 227 11 25 410 888 1238 2.62e-38 153
Msa1148630 AT3G63480.1 30.203 394 212 11 23 391 1 356 1.57e-37 146
Msa1148630 AT4G39050.1 28.804 368 202 9 26 381 99 418 1.83e-37 150
Msa1148630 AT1G55550.1 30.328 366 196 12 26 378 92 411 2.98e-37 149
Msa1148630 AT5G06670.8 27.937 383 207 11 11 378 57 385 6.05e-37 147
Msa1148630 AT5G06670.4 27.937 383 207 11 11 378 57 385 6.05e-37 147
Msa1148630 AT5G06670.7 27.937 383 207 11 11 378 57 385 6.05e-37 147
Msa1148630 AT5G06670.5 27.937 383 207 11 11 378 57 385 6.68e-37 147
Msa1148630 AT5G41310.1 31.768 362 178 12 26 374 423 728 7.15e-37 148
Msa1148630 AT5G06670.2 27.937 383 207 11 11 378 57 385 7.29e-37 148
Msa1148630 AT5G06670.3 27.937 383 207 11 11 378 57 385 7.29e-37 148
Msa1148630 AT1G01950.2 30.208 384 205 12 25 382 60 406 1.29e-36 147
Msa1148630 AT1G01950.3 30.208 384 205 12 25 382 60 406 1.33e-36 147
Msa1148630 AT1G18410.5 35.315 286 142 8 99 374 543 795 1.42e-36 147
Msa1148630 AT1G01950.1 30.208 384 205 12 25 382 60 406 1.43e-36 147
Msa1148630 AT1G18410.3 34.602 289 148 8 99 374 553 813 1.65e-36 147
Msa1148630 AT1G18410.2 34.602 289 148 8 99 374 553 813 1.65e-36 147
Msa1148630 AT1G18410.4 34.602 289 148 8 99 374 696 956 3.19e-36 146
Msa1148630 AT1G18410.1 35.315 286 142 8 99 374 696 948 3.41e-36 146
Msa1148630 AT1G59540.1 29.459 370 206 11 23 380 1 327 5.99e-36 145
Msa1148630 AT1G21730.1 29.607 331 189 8 62 378 94 394 8.02e-36 145
Msa1148630 AT4G21270.1 29.947 374 200 8 26 374 432 768 1.10e-35 144
Msa1148630 AT2G21380.2 28.611 360 207 10 26 378 105 421 1.86e-35 144
Msa1148630 AT2G21380.1 28.611 360 207 10 26 378 105 421 1.86e-35 144
Msa1148630 AT3G50240.3 32.588 313 135 9 121 387 4 286 2.54e-35 143
Msa1148630 AT3G12020.4 29.248 359 210 10 34 378 60 388 3.10e-35 143
Msa1148630 AT3G12020.1 29.248 359 210 10 34 378 60 388 3.10e-35 143
Msa1148630 AT4G05190.2 31.496 381 185 12 26 374 416 752 3.76e-35 142
Msa1148630 AT4G05190.1 31.496 381 185 12 26 374 429 765 4.24e-35 142
Msa1148630 AT1G63640.2 30.685 365 189 13 26 374 473 789 4.73e-35 143
Msa1148630 AT3G12020.3 29.248 359 210 10 34 378 60 388 5.55e-35 142
Msa1148630 AT3G12020.2 29.248 359 210 10 34 378 60 388 5.55e-35 142
Msa1148630 AT1G63640.5 30.376 372 188 13 26 374 463 786 1.44e-34 141
Msa1148630 AT1G63640.1 30.376 372 188 13 26 374 473 796 1.46e-34 141
Msa1148630 AT1G63640.4 30.376 372 188 13 26 374 473 796 1.46e-34 141
Msa1148630 AT1G73860.1 30.303 363 201 11 26 374 510 834 1.48e-34 141
Msa1148630 AT1G63640.3 30.376 372 188 13 26 374 473 796 1.56e-34 141
Msa1148630 AT3G19050.1 29.243 383 199 13 26 380 194 532 1.72e-34 142
Msa1148630 AT5G06670.6 27.296 392 207 12 11 378 57 394 2.57e-34 140
Msa1148630 AT5G06670.1 27.296 392 207 12 11 378 57 394 2.57e-34 140
Msa1148630 AT1G73860.2 30.303 363 201 11 26 374 427 751 2.58e-34 140
Msa1148630 AT3G43210.3 28.426 394 211 13 11 380 4 350 7.89e-34 139
Msa1148630 AT3G43210.5 28.426 394 211 13 11 380 4 350 7.89e-34 139
Msa1148630 AT3G43210.2 28.426 394 211 13 11 380 4 350 7.89e-34 139
Msa1148630 AT3G43210.4 28.426 394 211 13 11 380 4 350 7.89e-34 139
Msa1148630 AT3G43210.1 28.426 394 211 13 11 380 4 350 7.89e-34 139
Msa1148630 AT3G10310.1 30.688 378 203 11 26 387 364 698 1.18e-33 138
Msa1148630 AT1G72250.3 28.919 370 202 11 26 378 513 838 1.19e-33 139
Msa1148630 AT3G10310.2 30.688 378 203 11 26 387 364 698 1.20e-33 138
Msa1148630 AT1G72250.2 28.919 370 202 11 26 378 501 826 1.23e-33 139
Msa1148630 AT1G72250.4 28.919 370 202 11 26 378 512 837 1.29e-33 138
Msa1148630 AT3G44050.1 29.551 379 203 11 26 380 94 432 1.49e-33 138
Msa1148630 AT1G72250.1 28.919 370 202 11 26 378 492 817 1.50e-33 138
Msa1148630 AT3G44730.2 30.997 371 187 13 26 374 423 746 1.86e-33 138
Msa1148630 AT3G44730.3 30.997 371 187 13 26 374 423 746 1.86e-33 138
Msa1148630 AT3G44730.1 30.997 371 187 13 26 374 378 701 1.90e-33 138
Msa1148630 AT3G44730.4 30.997 371 187 13 26 374 378 701 1.90e-33 138
Msa1148630 AT3G51150.2 30.000 370 200 9 25 379 17 342 2.17e-33 137
Msa1148630 AT3G51150.4 30.000 370 200 9 25 379 17 342 2.17e-33 137
Msa1148630 AT3G51150.3 30.000 370 200 9 25 379 17 342 2.17e-33 137
Msa1148630 AT3G51150.1 30.000 370 200 9 25 379 17 342 2.56e-33 137
Msa1148630 AT4G24170.1 30.352 369 196 12 25 379 6 327 2.85e-33 137
Msa1148630 AT4G24170.2 30.352 369 196 12 25 379 6 327 2.85e-33 137
Msa1148630 AT3G54870.1 29.448 326 182 8 77 382 148 445 3.30e-33 137
Msa1148630 AT3G54870.2 29.358 327 183 8 76 382 147 445 3.46e-33 137
Msa1148630 AT3G54870.3 29.448 326 182 8 77 382 148 445 3.53e-33 137
Msa1148630 AT3G23670.2 28.278 389 203 9 21 380 92 433 1.23e-32 135
Msa1148630 AT4G14150.1 28.535 389 202 10 21 380 87 428 1.32e-32 135
Msa1148630 AT5G66310.2 29.589 365 208 8 25 379 18 343 1.40e-32 135
Msa1148630 AT5G66310.3 29.589 365 208 8 25 379 18 343 1.40e-32 135
Msa1148630 AT5G66310.1 29.589 365 208 8 25 379 18 343 1.40e-32 135
Msa1148630 AT3G23670.1 28.278 389 203 9 21 380 92 433 2.33e-32 134
Msa1148630 AT3G10180.2 30.721 319 177 8 78 380 39 329 2.59e-32 134
Msa1148630 AT3G10180.1 30.721 319 177 8 78 380 39 329 2.63e-32 134
Msa1148630 AT4G27180.1 30.026 383 184 11 26 374 388 720 3.32e-32 133
Msa1148630 AT4G27180.2 30.026 383 184 11 26 374 388 720 3.32e-32 133
Msa1148630 AT1G18370.1 29.688 384 213 10 10 380 16 355 4.35e-32 133
Msa1148630 AT2G47500.1 29.708 377 188 13 26 373 400 728 5.73e-32 133
Msa1148630 AT2G47500.2 29.708 377 188 13 26 373 400 728 7.49e-32 132
Msa1148630 AT5G27550.2 28.997 369 201 12 26 378 133 456 5.85e-31 129
Msa1148630 AT5G27550.1 28.997 369 201 12 26 378 133 456 5.85e-31 129
Msa1148630 AT5G27000.1 28.532 361 208 11 26 374 395 717 1.02e-30 129
Msa1148630 AT3G17360.2 31.023 303 158 6 102 380 232 507 2.81e-30 128
Msa1148630 AT3G17360.3 31.023 303 158 6 102 380 232 507 2.88e-30 128
Msa1148630 AT3G17360.1 31.023 303 158 6 102 380 232 507 2.91e-30 128
Msa1148630 AT1G09170.5 29.919 371 196 12 26 373 435 764 3.90e-30 127
Msa1148630 AT1G09170.4 29.919 371 196 12 26 373 435 764 6.05e-30 126
Msa1148630 AT5G54670.3 28.610 374 201 10 26 374 337 669 6.95e-30 126
Msa1148630 AT5G54670.1 28.610 374 201 10 26 374 397 729 7.01e-30 126
Msa1148630 AT5G54670.2 28.610 374 201 10 26 374 397 729 7.01e-30 126
Msa1148630 AT1G09170.2 29.919 371 196 12 26 373 435 764 8.37e-30 126
Msa1148630 AT1G09170.3 29.919 371 196 12 26 373 435 764 1.02e-29 125
Msa1148630 AT1G09170.7 29.919 371 196 12 26 373 435 764 1.02e-29 125
Msa1148630 AT2G21300.2 28.242 347 194 8 25 360 24 326 1.91e-28 122
Msa1148630 AT2G21300.4 28.242 347 194 8 25 360 24 326 1.91e-28 122
Msa1148630 AT2G21300.3 28.242 347 194 8 25 360 24 326 1.91e-28 122
Msa1148630 AT2G21300.1 28.242 347 194 8 25 360 24 326 1.91e-28 122
Msa1148630 AT2G21300.5 28.242 347 194 8 25 360 24 326 1.91e-28 122
Msa1148630 AT1G01950.4 28.614 332 185 9 116 425 1 302 3.13e-27 118
Msa1148630 AT4G38950.3 27.089 347 198 8 25 360 13 315 6.64e-27 117
Msa1148630 AT4G38950.5 27.089 347 198 8 25 360 13 315 6.64e-27 117
Msa1148630 AT4G38950.4 27.089 347 198 8 25 360 13 315 6.64e-27 117
Msa1148630 AT4G38950.1 27.089 347 198 8 25 360 13 315 6.64e-27 117
Msa1148630 AT4G38950.2 27.089 347 198 8 25 360 13 315 6.64e-27 117
Msa1148630 AT1G09170.1 29.041 365 171 11 26 373 435 728 3.28e-26 115
Msa1148630 AT1G09170.6 29.730 333 181 10 26 346 435 726 3.89e-26 114
Msa1148630 AT1G09170.8 29.730 333 181 10 26 346 435 726 3.89e-26 114
Msa1148630 AT5G27950.2 32.075 265 138 6 129 378 1 238 7.94e-25 108
Msa1148630 AT5G65460.2 26.148 501 278 20 26 493 139 580 5.31e-24 108
Msa1148630 AT5G65460.4 26.148 501 278 20 26 493 139 580 7.26e-24 108
Msa1148630 AT5G65460.6 26.148 501 278 20 26 493 139 580 7.37e-24 107
Msa1148630 AT5G65460.1 26.148 501 278 20 26 493 139 580 8.48e-24 107
Msa1148630 AT1G59540.2 28.626 262 150 6 129 380 1 235 2.49e-23 105
Msa1148630 AT5G42490.1 28.617 311 163 10 25 323 9 272 4.51e-22 102
Msa1148630 AT5G42490.2 28.617 311 163 10 25 323 9 272 4.54e-22 102
Msa1148630 AT5G65460.3 25.787 508 278 21 26 493 139 587 1.11e-21 101
Msa1148630 AT4G14330.1 25.938 320 176 9 79 378 89 367 1.40e-21 100
Msa1148630 AT5G10470.1 25.459 381 224 12 26 397 143 472 1.84e-20 97.1
Msa1148630 AT5G10470.2 25.459 381 224 12 26 397 143 472 1.94e-20 97.1
Msa1148630 AT3G20150.2 24.699 332 183 11 81 380 142 438 5.40e-18 89.4
Msa1148630 AT3G20150.1 24.699 332 183 11 81 380 142 438 6.08e-18 89.0
Msa1148630 AT3G51150.5 32.812 192 95 4 195 379 25 189 9.55e-18 88.2
Msa1148630 AT1G20060.7 26.471 340 186 11 46 361 130 429 5.92e-16 82.4
Msa1148630 AT1G20060.9 26.471 340 186 11 46 361 130 429 6.13e-16 82.4
Msa1148630 AT1G20060.4 26.471 340 186 11 46 361 130 429 6.18e-16 82.4
Msa1148630 AT1G20060.8 26.471 340 186 11 46 361 130 429 6.18e-16 82.4
Msa1148630 AT1G20060.10 26.471 340 186 11 46 361 130 429 6.19e-16 82.4
Msa1148630 AT1G20060.3 26.471 340 186 11 46 361 130 429 6.30e-16 82.4
Msa1148630 AT1G20060.6 26.471 340 186 11 46 361 130 429 6.64e-16 82.4
Msa1148630 AT1G20060.5 26.471 340 186 11 46 361 130 429 6.98e-16 82.4
Msa1148630 AT1G20060.2 26.471 340 186 11 46 361 130 429 7.24e-16 82.4
Msa1148630 AT1G20060.1 27.215 158 101 3 74 222 157 309 5.31e-12 69.7
Msa1148630 AT5G65460.5 26.870 361 194 15 159 493 18 334 8.27e-11 65.9

Find 166 sgRNAs with CRISPR-Local

Find 329 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCCACTAAGAAAGGGTTTC+AGG 0.192536 7_4:+29016402 Msa1148630:CDS
TGATTCCAGTGCTGCCTTAT+TGG 0.219198 7_4:-29015889 None:intergenic
CTGTCCCTATAGGGTGTTCT+TGG 0.234705 7_4:-29014666 None:intergenic
AATTCGGACATTGTATTTAC+AGG 0.240436 7_4:-29014279 None:intergenic
AGCAAGTGAGATTTCAGTTT+TGG 0.243100 7_4:+29014212 Msa1148630:CDS
CCAAGGTAAGGGTCATAGTT+AGG 0.270762 7_4:+29012729 Msa1148630:CDS
AGAGGAGCTACTAGAGTTAA+AGG 0.271561 7_4:+29016704 Msa1148630:CDS
GTGTAACTTTCTTAGTCTTT+TGG 0.286241 7_4:+29017529 Msa1148630:three_prime_UTR
CTAGAGAGTCCTGCAATATA+CGG 0.293700 7_4:-29014698 None:intergenic
TGCTGGTACATCTTTGCTTA+AGG 0.296025 7_4:-29016272 None:intergenic
TTCTAGCCAAGCTTTCAATT+TGG 0.299864 7_4:-29015292 None:intergenic
ATCTGTTCATACTGTTAGTT+TGG 0.307923 7_4:+29015188 Msa1148630:CDS
CAGGTTACCGTCCACTCAAT+TGG 0.310031 7_4:+29014466 Msa1148630:CDS
AAGAAAGGGTTTCAGGAAAA+TGG 0.319274 7_4:+29016409 Msa1148630:CDS
GCTGGTACATCTTTGCTTAA+GGG 0.322766 7_4:-29016271 None:intergenic
TGCCCTCATGGTTGCCTGCC+TGG 0.327794 7_4:+29014734 Msa1148630:CDS
AAAAGTGAGATACAAGAAAC+TGG 0.328169 7_4:-29012797 None:intergenic
GACTGAGCATGAGGCCAATA+AGG 0.332710 7_4:+29015875 Msa1148630:CDS
CCTTACCTTGGAAACTGAAA+TGG 0.336754 7_4:-29012717 None:intergenic
AATGCTACTGTGTTTGCTTA+TGG 0.345908 7_4:+29013108 Msa1148630:CDS
TACTGTGTAAGCAGGGCCTT+TGG 0.347531 7_4:+29015567 Msa1148630:intron
TTCCTGAAACCCTTTCTTAG+TGG 0.355395 7_4:-29016404 None:intergenic
GTCAATTTGCTGTCCCTATA+GGG 0.356552 7_4:-29014675 None:intergenic
GTGGAGCAGGTTGCAGAAAA+AGG 0.356653 7_4:-29016385 None:intergenic
TGCAAGAAGTTCTGCTTTGA+AGG 0.362396 7_4:+29016453 Msa1148630:CDS
TCAGAATCCAGGAGAATATC+AGG 0.366885 7_4:+29015164 Msa1148630:intron
GTCCACTCAATTGGGGTAAT+GGG 0.368280 7_4:+29014475 Msa1148630:CDS
ATAGTCCCCTGAGGTGAATA+TGG 0.371640 7_4:-29014248 None:intergenic
CGTCCACTCAATTGGGGTAA+TGG 0.371974 7_4:+29014474 Msa1148630:CDS
GGTCAATTTGCTGTCCCTAT+AGG 0.380127 7_4:-29014676 None:intergenic
CATTATGTCCTTCCGTTGCT+TGG 0.383909 7_4:-29014509 None:intergenic
CAAACCAAGAACACCCTATA+GGG 0.384546 7_4:+29014662 Msa1148630:CDS
AGCAGAGCTAATGGTGGAAC+CGG 0.386413 7_4:-29015385 None:intergenic
CTTACCTTGGAAACTGAAAT+GGG 0.387259 7_4:-29012716 None:intergenic
TCAGGGCATAGGAGACAAAA+TGG 0.393383 7_4:+29017138 Msa1148630:intron
AGGTTACCGTCCACTCAATT+GGG 0.394689 7_4:+29014467 Msa1148630:CDS
CCATTTCAGTTTCCAAGGTA+AGG 0.394848 7_4:+29012717 Msa1148630:CDS
TCCATGTCAACGTTACCTTT+TGG 0.410793 7_4:-29015267 None:intergenic
AGAAGAAAGTCCACTAAAAT+CGG 0.413708 7_4:+29017183 Msa1148630:CDS
GAAATGGGGTTGTTATTGTT+GGG 0.418057 7_4:-29012701 None:intergenic
ACAAACCAAGAACACCCTAT+AGG 0.421273 7_4:+29014661 Msa1148630:CDS
TTGAATACCATTGATGTTGA+TGG 0.423673 7_4:-29016329 None:intergenic
CAAGGTAAGGGTCATAGTTA+GGG 0.424627 7_4:+29012730 Msa1148630:CDS
TTGAGGAGTGAGAGTGGGAG+AGG 0.426770 7_4:-29012582 None:intergenic
GCTTATGGTGCTACTGGTAG+TGG 0.426928 7_4:+29013123 Msa1148630:CDS
TTGAAATTGAGGAGTGAGAG+TGG 0.427528 7_4:-29012588 None:intergenic
TGAAATGGGGTTGTTATTGT+TGG 0.427888 7_4:-29012702 None:intergenic
AAAGTAGTGACCGTTTGTTT+TGG 0.432476 7_4:-29012553 None:intergenic
AAACCCTTTCTTAGTGGAGC+AGG 0.438676 7_4:-29016398 None:intergenic
GGAGAAGACCTCTTGAAATT+CGG 0.440719 7_4:-29014295 None:intergenic
GTGTTTGCTTATGGTGCTAC+TGG 0.443703 7_4:+29013117 Msa1148630:CDS
CAAATTGACCCGTATATTGC+AGG 0.450340 7_4:+29014689 Msa1148630:CDS
CGTATATTGCAGGACTCTCT+AGG 0.452947 7_4:+29014699 Msa1148630:CDS
GCTATGTAGAACATGCATTC+TGG 0.454134 7_4:+29015828 Msa1148630:intron
TATGTGTGATTTCAGAATCC+AGG 0.457622 7_4:+29015153 Msa1148630:intron
TGATCTCCTAGCAGAGCTAA+TGG 0.462039 7_4:-29015394 None:intergenic
AAATGGGGTTGTTATTGTTG+GGG 0.466146 7_4:-29012700 None:intergenic
GCAACCTGCTCCACTAAGAA+AGG 0.467614 7_4:+29016394 Msa1148630:CDS
AATAGAAGGAGCTGCAATGA+AGG 0.472976 7_4:+29014561 Msa1148630:CDS
TGGAAGCCAAATTGAAAGCT+TGG 0.473460 7_4:+29015286 Msa1148630:CDS
TGTGGTTTCGTGAGAGAGGA+AGG 0.474546 7_4:-29012759 None:intergenic
GAAGATTGATGTTGAAATTG+AGG 0.477666 7_4:-29012599 None:intergenic
AACTTATAGCTTTACCAGGC+AGG 0.481857 7_4:-29014748 None:intergenic
ACAGATTCCTGATATTCTCC+TGG 0.485357 7_4:-29015171 None:intergenic
TCAAATCTTTCTCACATCAA+TGG 0.485581 7_4:+29012640 Msa1148630:exon
TTAGTTTGGCTGCTCGATCA+AGG 0.490952 7_4:+29015202 Msa1148630:CDS
CCGAAAATAGCCGGTATCAT+CGG 0.493905 7_4:-29013078 None:intergenic
CTCTCTCCCATCAACATCAA+TGG 0.494198 7_4:+29016322 Msa1148630:CDS
CCTAACTATGACCCTTACCT+TGG 0.494338 7_4:-29012729 None:intergenic
CAACCCCATTTCAGTTTCCA+AGG 0.495157 7_4:+29012712 Msa1148630:CDS
GGGATCTAGTCGTGCCCTCA+TGG 0.500153 7_4:+29014722 Msa1148630:CDS
CAGGTAATGAAGACAATAGA+AGG 0.502947 7_4:+29014547 Msa1148630:CDS
ATTGTATTCCTTCAGGGCAT+AGG 0.503428 7_4:+29017127 Msa1148630:intron
TTAAGTGACCTGGAGAAGAT+TGG 0.506704 7_4:+29017295 Msa1148630:CDS
AAGATGGCCATATTCACCTC+AGG 0.507995 7_4:+29014241 Msa1148630:CDS
TACTTTCAATAGCTCAGTGA+AGG 0.508772 7_4:+29015419 Msa1148630:CDS
AATGGACTTTGTAGTACTGC+TGG 0.509124 7_4:-29016289 None:intergenic
GATTGGTCTCTCTTTGAAGC+AGG 0.509502 7_4:+29017312 Msa1148630:CDS
ATCTCAAAGACCCACTTACC+AGG 0.510439 7_4:+29012858 Msa1148630:CDS
CACATTTGACAGTGCAAACA+AGG 0.511891 7_4:-29014619 None:intergenic
TGAGGCCAATAAGGCAGCAC+TGG 0.513388 7_4:+29015884 Msa1148630:CDS
CAGGGAACTGAAGAACAACC+TGG 0.514866 7_4:+29014072 Msa1148630:intron
CATTTCAGTTTCCAAGGTAA+GGG 0.516317 7_4:+29012718 Msa1148630:CDS
TCGGAACGAGTGTTACAAGT+TGG 0.519822 7_4:+29012996 Msa1148630:CDS
AAGCACTCCATGACTCCTGC+TGG 0.523110 7_4:-29014367 None:intergenic
AATGCGTTTAAAGTTGATGC+AGG 0.524374 7_4:+29014528 Msa1148630:CDS
GTCTCTAGTTTATGAGCTGA+AGG 0.524968 7_4:-29015243 None:intergenic
GTATATTGCAGGACTCTCTA+GGG 0.527165 7_4:+29014700 Msa1148630:CDS
GGATTCATTCTTTGATCAAG+AGG 0.530120 7_4:+29013017 Msa1148630:CDS
AATGGGGTTGTTATTGTTGG+GGG 0.530438 7_4:-29012699 None:intergenic
TTTGCGCCTCTGAATACCAC+TGG 0.531310 7_4:-29014316 None:intergenic
ATTTGTTAAATAATGCAAGC+AGG 0.533405 7_4:+29016584 Msa1148630:CDS
TTCATACTATGAGGTCTACA+TGG 0.535101 7_4:+29014161 Msa1148630:CDS
AGAAGTTAGTCCGATGATAC+CGG 0.535452 7_4:+29013068 Msa1148630:CDS
TGAATACCATTGATGTTGAT+GGG 0.537076 7_4:-29016328 None:intergenic
ATTGCCAACGGCATCAAGCC+AGG 0.538567 7_4:-29014090 None:intergenic
TCAGGAAAATGGCACTCCAC+TGG 0.539018 7_4:+29016420 Msa1148630:CDS
AAAATCCAAACCAAAACAAA+CGG 0.539461 7_4:+29012543 Msa1148630:five_prime_UTR
TACTATCGACTCCTCCTGAT+GGG 0.542716 7_4:+29014400 Msa1148630:CDS
TTGACAAATAGACAGGATAG+TGG 0.543005 7_4:-29014115 None:intergenic
ACAAGACTTCCATTCCCATC+AGG 0.544458 7_4:-29014414 None:intergenic
GACGTATCCAGCAGGAGTCA+TGG 0.547288 7_4:+29014360 Msa1148630:CDS
CTGAACCTCATAGACTTGGC+AGG 0.548095 7_4:+29014447 Msa1148630:CDS
CATAAACTAGAGACACCAAA+AGG 0.549478 7_4:+29015252 Msa1148630:CDS
TAGAGAGTCCTGCAATATAC+GGG 0.552724 7_4:-29014697 None:intergenic
CATGTTGCAGTTAAGTGACC+TGG 0.553001 7_4:+29017285 Msa1148630:intron
AAGAGAGACCAATCTTCTCC+AGG 0.553591 7_4:-29017303 None:intergenic
TTAGTGGACTTTCTTCTCTG+AGG 0.555574 7_4:-29017177 None:intergenic
TCGACTCCTCCTGATGGGAA+TGG 0.557805 7_4:+29014405 Msa1148630:CDS
TGGAAAGACATATACTATGC+AGG 0.559413 7_4:+29013143 Msa1148630:CDS
TCAAAGACATAGTCTGAAGA+TGG 0.559622 7_4:-29016354 None:intergenic
CAACCTGCTCCACTAAGAAA+GGG 0.561860 7_4:+29016395 Msa1148630:CDS
AAGAGCTCACAACAAAGACT+TGG 0.567687 7_4:+29015330 Msa1148630:CDS
GCCTCAATGACGTATCCAGC+AGG 0.568523 7_4:+29014352 Msa1148630:CDS
GTACTATCGACTCCTCCTGA+TGG 0.574583 7_4:+29014399 Msa1148630:CDS
TTCTTGTGGTTTCGTGAGAG+AGG 0.578238 7_4:-29012763 None:intergenic
AGCTCAAATTTCATACTATG+AGG 0.579166 7_4:+29014152 Msa1148630:CDS
GGTAACCTGCCAAGTCTATG+AGG 0.585231 7_4:-29014452 None:intergenic
TACAATGTCCGAATTTCAAG+AGG 0.592483 7_4:+29014287 Msa1148630:CDS
GATGTATTCCAAGCAACGGA+AGG 0.596808 7_4:+29014501 Msa1148630:CDS
TTTCAAGAGGTCTTCTCCAG+TGG 0.601275 7_4:+29014300 Msa1148630:CDS
CTTGCACTGAATTTGTCCAG+TGG 0.602500 7_4:-29016436 None:intergenic
GCAGAGCTAATGGTGGAACC+GGG 0.605202 7_4:-29015384 None:intergenic
GGGAATGGAAGTCTTGTATG+TGG 0.605834 7_4:+29014420 Msa1148630:CDS
ACAACCTGGCTTGATGCCGT+TGG 0.606768 7_4:+29014086 Msa1148630:CDS
GAATCATATAATGATGTACC+TGG 0.610099 7_4:+29015906 Msa1148630:CDS
CTGTCTATTTGTCAAAACAC+TGG 0.610198 7_4:+29014123 Msa1148630:CDS
TTACATCCACCGAAAATAGC+CGG 0.611157 7_4:-29013087 None:intergenic
ACCAAAAGGTAACGTTGACA+TGG 0.612646 7_4:+29015266 Msa1148630:CDS
ACTTTCAATAGCTCAGTGAA+GGG 0.614829 7_4:+29015420 Msa1148630:CDS
ATAGAAGGAGCTGCAATGAA+GGG 0.615772 7_4:+29014562 Msa1148630:CDS
GATCAAGAGGATAACAATGT+GGG 0.615777 7_4:+29013030 Msa1148630:CDS
GTGGTTTCGTGAGAGAGGAA+GGG 0.615894 7_4:-29012758 None:intergenic
AGGCGCAAAACTGCACACAC+AGG 0.616518 7_4:+29014330 Msa1148630:CDS
AAAACTGAACCTCATAGACT+TGG 0.619189 7_4:+29014443 Msa1148630:CDS
CATTACCCCAATTGAGTGGA+CGG 0.622510 7_4:-29014473 None:intergenic
AACCCATTACCCCAATTGAG+TGG 0.622973 7_4:-29014477 None:intergenic
GTTTGATGTATTCCAAGCAA+CGG 0.624754 7_4:+29014497 Msa1148630:CDS
TGAAATTGAGGAGTGAGAGT+GGG 0.625065 7_4:-29012587 None:intergenic
ACTCTTTGATGACAAAGCAG+AGG 0.629293 7_4:+29017466 Msa1148630:CDS
TAAGAGAGAGACTGAGCATG+AGG 0.631727 7_4:+29015866 Msa1148630:CDS
TGGGTCATCACAATTTCTTG+TGG 0.632098 7_4:-29012777 None:intergenic
AGATGGCCATATTCACCTCA+GGG 0.636559 7_4:+29014242 Msa1148630:CDS
GGTTACCGTCCACTCAATTG+GGG 0.640265 7_4:+29014468 Msa1148630:CDS
TCTTCTCCAGTGGTATTCAG+AGG 0.640669 7_4:+29014310 Msa1148630:CDS
GTTCCACCATTAGCTCTGCT+AGG 0.640753 7_4:+29015388 Msa1148630:CDS
TGATCAAGAGGATAACAATG+TGG 0.640844 7_4:+29013029 Msa1148630:CDS
TACCAGGCAGGCAACCATGA+GGG 0.641534 7_4:-29014736 None:intergenic
GAACATGCATTCTGGTGTTG+AGG 0.643262 7_4:+29015836 Msa1148630:intron
ACTCTAAGAGGTCGTAACAT+CGG 0.645191 7_4:-29014185 None:intergenic
AAAGCTTGGCTAGAATCAAG+AGG 0.648838 7_4:+29015300 Msa1148630:CDS
AAAGTGAGATACAAGAAACT+GGG 0.651165 7_4:-29012796 None:intergenic
TTCAATAGCTCAGTGAAGGG+TGG 0.656508 7_4:+29015423 Msa1148630:CDS
AGACTTCCATTCCCATCAGG+AGG 0.657956 7_4:-29014411 None:intergenic
TCCTGCTGGATACGTCATTG+AGG 0.658697 7_4:-29014353 None:intergenic
TTCAGACTATGTCTTTGACA+CGG 0.659344 7_4:+29016359 Msa1148630:CDS
ATTTCTAAAAGAAACTCCAA+AGG 0.665957 7_4:-29015583 None:intergenic
AGGATAGTGGACATTGCCAA+CGG 0.676034 7_4:-29014102 None:intergenic
TTACCTTGGAAACTGAAATG+GGG 0.684729 7_4:-29012715 None:intergenic
TCTCCTAGCAGAGCTAATGG+TGG 0.684954 7_4:-29015391 None:intergenic
TATATTGCAGGACTCTCTAG+GGG 0.686018 7_4:+29014701 Msa1148630:CDS
TTACCAGGCAGGCAACCATG+AGG 0.691053 7_4:-29014737 None:intergenic
AAGCTCAACATACTACTGAG+AGG 0.692590 7_4:+29015466 Msa1148630:CDS
GATGGCCATATTCACCTCAG+GGG 0.723977 7_4:+29014243 Msa1148630:CDS
ATATTGCAGGACTCTCTAGG+GGG 0.730181 7_4:+29014702 Msa1148630:CDS
GAACTTGAGATAGTCCCCTG+AGG 0.791662 7_4:-29014257 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTGAATTTTTAGTATT+TGG + chr7_4:29013377-29013396 Msa1148630:intron 10.0%
!!! TTAGTTAAGTTATTGAATTT+TGG + chr7_4:29012952-29012971 Msa1148630:intron 15.0%
!!! CAATTTTGTTAATTTGTTTT+TGG + chr7_4:29013216-29013235 Msa1148630:intron 15.0%
!! ATATACTCTGATTATTTAAA+AGG + chr7_4:29015035-29015054 Msa1148630:intron 15.0%
!!! AATATTAAATTTTCATGCAT+TGG + chr7_4:29015767-29015786 Msa1148630:intron 15.0%
!! ATTCGATATTATAATGAAAA+TGG + chr7_4:29015966-29015985 Msa1148630:intron 15.0%
!! TTAAAAATTAAACAGTGTTA+AGG - chr7_4:29016678-29016697 None:intergenic 15.0%
!!! ATTGATTTTTTTTTGAAACC+TGG - chr7_4:29012879-29012898 None:intergenic 20.0%
!!! TGAATTTTGGTTTTTGATTT+TGG + chr7_4:29012965-29012984 Msa1148630:intron 20.0%
!!! TTTGATTTTGGTTTTTTAGT+CGG + chr7_4:29012977-29012996 Msa1148630:intron 20.0%
!! AAATTCAATAAATCTACCAA+AGG - chr7_4:29013369-29013388 None:intergenic 20.0%
!!! TTATTTTCAATCCTCATTTT+TGG - chr7_4:29013930-29013949 None:intergenic 20.0%
!! AAACTGCTAAAAAATTAAAC+AGG - chr7_4:29014005-29014024 None:intergenic 20.0%
!!! TTTTTCCTCTCATTTAATAT+TGG + chr7_4:29014779-29014798 Msa1148630:intron 20.0%
!!! TCTTTTAGAAATTTACTAGA+TGG + chr7_4:29015594-29015613 Msa1148630:CDS 20.0%
!!! TTCTAGTTTCTTTTAAAACT+CGG + chr7_4:29016068-29016087 Msa1148630:intron 20.0%
!! AAAAATAGATTATGTGAGAA+AGG - chr7_4:29016527-29016546 None:intergenic 20.0%
!! AGAAATTATGCAAAATACAA+TGG - chr7_4:29016623-29016642 None:intergenic 20.0%
!!! TTTAATTTTTAAATGCAGAG+AGG + chr7_4:29016686-29016705 Msa1148630:intron 20.0%
!!! TTTCTTCATTTTCTAATACT+TGG + chr7_4:29017095-29017114 Msa1148630:intron 20.0%
!!! TTCTTCATTTTCTAATACTT+GGG + chr7_4:29017096-29017115 Msa1148630:intron 20.0%
! AAAATCCAAACCAAAACAAA+CGG + chr7_4:29012543-29012562 Msa1148630:five_prime_UTR 25.0%
!!! AATTTGTTTTTGGTATATGC+AGG + chr7_4:29013226-29013245 Msa1148630:intron 25.0%
! AACAATTATGTGATTATGTG+AGG + chr7_4:29013321-29013340 Msa1148630:intron 25.0%
! ACAATTATGTGATTATGTGA+GGG + chr7_4:29013322-29013341 Msa1148630:intron 25.0%
!! TGGTTATACTTTTCTGAATA+TGG + chr7_4:29013475-29013494 Msa1148630:intron 25.0%
!! CTTTTCTGAATATGGTAAAA+CGG + chr7_4:29013483-29013502 Msa1148630:intron 25.0%
! ATACATTATTGCACTAGATA+AGG - chr7_4:29013571-29013590 None:intergenic 25.0%
! TTATCTAGTGCAATAATGTA+TGG + chr7_4:29013570-29013589 Msa1148630:intron 25.0%
!! ATTGCAATGATTTTATCTCA+AGG + chr7_4:29013749-29013768 Msa1148630:intron 25.0%
! CAATATCAAGAATTCAAAAG+TGG - chr7_4:29013958-29013977 None:intergenic 25.0%
!! CACTTTTGAATTCTTGATAT+TGG + chr7_4:29013956-29013975 Msa1148630:intron 25.0%
!! ATAAAACTTATAGCTTTACC+AGG - chr7_4:29014755-29014774 None:intergenic 25.0%
! ATGAACCAATATTAAATGAG+AGG - chr7_4:29014787-29014806 None:intergenic 25.0%
!!! CTCATTTAATATTGGTTCAT+TGG + chr7_4:29014787-29014806 Msa1148630:intron 25.0%
! ACACTAATCAGAATTAATAG+GGG - chr7_4:29014917-29014936 None:intergenic 25.0%
! GACACTAATCAGAATTAATA+GGG - chr7_4:29014918-29014937 None:intergenic 25.0%
! GGATAGAATAACAAATATCT+AGG + chr7_4:29014994-29015013 Msa1148630:intron 25.0%
! ATCAGAGTATATATTAGATC+TGG - chr7_4:29015027-29015046 None:intergenic 25.0%
!!! ATTCTGAAATCACACATAAA+GGG - chr7_4:29015151-29015170 None:intergenic 25.0%
!! ATTTCTAAAAGAAACTCCAA+AGG - chr7_4:29015586-29015605 None:intergenic 25.0%
! ACAGTTGGATAAATATGAAA+CGG + chr7_4:29016038-29016057 Msa1148630:intron 25.0%
! CGCATACATTAATTAATACT+TGG + chr7_4:29016187-29016206 Msa1148630:intron 25.0%
!!! TTTTAACTTCACTAGCAAAA+TGG + chr7_4:29016488-29016507 Msa1148630:intron 25.0%
!! ATTTGTTAAATAATGCAAGC+AGG + chr7_4:29016584-29016603 Msa1148630:CDS 25.0%
!! AGCTTTTGCTAAAATTAAAG+TGG - chr7_4:29016934-29016953 None:intergenic 25.0%
! AAAATAATGTGATGCATGTT+TGG - chr7_4:29017007-29017026 None:intergenic 25.0%
!! TTTTACCTGCATTAACAAAA+AGG + chr7_4:29017679-29017698 Msa1148630:three_prime_UTR 25.0%
!!! GGTGTTATTCTTTTAATGTA+TGG + chr7_4:29017700-29017719 Msa1148630:three_prime_UTR 25.0%
GAAGATTGATGTTGAAATTG+AGG - chr7_4:29012602-29012621 None:intergenic 30.0%
TCAAATCTTTCTCACATCAA+TGG + chr7_4:29012640-29012659 Msa1148630:exon 30.0%
AAAGTGAGATACAAGAAACT+GGG - chr7_4:29012799-29012818 None:intergenic 30.0%
AAAAGTGAGATACAAGAAAC+TGG - chr7_4:29012800-29012819 None:intergenic 30.0%
!!! TTTTTTGAAACCTGGTAAGT+GGG - chr7_4:29012871-29012890 None:intergenic 30.0%
!!! TTTTTTTGAAACCTGGTAAG+TGG - chr7_4:29012872-29012891 None:intergenic 30.0%
TCAATAAATCTACCAAAGGT+GGG - chr7_4:29013365-29013384 None:intergenic 30.0%
TTCAATAAATCTACCAAAGG+TGG - chr7_4:29013366-29013385 None:intergenic 30.0%
! AAATGTAAGTTTGAGTTCAG+AGG + chr7_4:29013404-29013423 Msa1148630:intron 30.0%
! AATGTAAGTTTGAGTTCAGA+GGG + chr7_4:29013405-29013424 Msa1148630:intron 30.0%
TTCATGTTTAACCATGACAT+AGG + chr7_4:29013449-29013468 Msa1148630:intron 30.0%
TTTAACCATGACATAGGTTA+TGG + chr7_4:29013455-29013474 Msa1148630:intron 30.0%
TATAACCATAACCTATGTCA+TGG - chr7_4:29013463-29013482 None:intergenic 30.0%
ATTAGAGTTTGTACAACCTA+TGG - chr7_4:29013640-29013659 None:intergenic 30.0%
ATAGGTTGTACAAACTCTAA+TGG + chr7_4:29013639-29013658 Msa1148630:intron 30.0%
AACTCTAATGGTATTAATGC+CGG + chr7_4:29013651-29013670 Msa1148630:intron 30.0%
TGAACCCTAATCGTATATTA+GGG + chr7_4:29013814-29013833 Msa1148630:intron 30.0%
ACATCCCTAATATACGATTA+GGG - chr7_4:29013821-29013840 None:intergenic 30.0%
TACATCCCTAATATACGATT+AGG - chr7_4:29013822-29013841 None:intergenic 30.0%
TAGAAGTGAGAAAAACTCTA+GGG - chr7_4:29013877-29013896 None:intergenic 30.0%
TTCCTATACTACCAAAAATG+AGG + chr7_4:29013916-29013935 Msa1148630:intron 30.0%
!!! ATCCTCATTTTTGGTAGTAT+AGG - chr7_4:29013921-29013940 None:intergenic 30.0%
TAGTTGAAATAAACGATGCT+TGG + chr7_4:29014044-29014063 Msa1148630:intron 30.0%
AGCTCAAATTTCATACTATG+AGG + chr7_4:29014152-29014171 Msa1148630:CDS 30.0%
AATTCGGACATTGTATTTAC+AGG - chr7_4:29014282-29014301 None:intergenic 30.0%
AATTCTCTTGGTCATTCTAA+TGG - chr7_4:29014878-29014897 None:intergenic 30.0%
CGACACTAATCAGAATTAAT+AGG - chr7_4:29014919-29014938 None:intergenic 30.0%
ACTAGTAATGACATGAGTAA+TGG - chr7_4:29015084-29015103 None:intergenic 30.0%
!! GATTCTGAAATCACACATAA+AGG - chr7_4:29015152-29015171 None:intergenic 30.0%
ATCTGTTCATACTGTTAGTT+TGG + chr7_4:29015188-29015207 Msa1148630:CDS 30.0%
!! TGCTTTTGATTCTTGCAAAA+AGG + chr7_4:29015623-29015642 Msa1148630:CDS 30.0%
GAATCATATAATGATGTACC+TGG + chr7_4:29015906-29015925 Msa1148630:CDS 30.0%
TCATATTTATCCAACTGTTC+TGG - chr7_4:29016036-29016055 None:intergenic 30.0%
TGAATACCATTGATGTTGAT+GGG - chr7_4:29016331-29016350 None:intergenic 30.0%
TTGAATACCATTGATGTTGA+TGG - chr7_4:29016332-29016351 None:intergenic 30.0%
CTAGTGAAGTTAAAACAACT+AGG - chr7_4:29016483-29016502 None:intergenic 30.0%
GATAAAGAGACTATTCAAAC+TGG - chr7_4:29016760-29016779 None:intergenic 30.0%
TCATTATTGCACTGTTCTTT+AGG + chr7_4:29016790-29016809 Msa1148630:intron 30.0%
CATTATTGCACTGTTCTTTA+GGG + chr7_4:29016791-29016810 Msa1148630:intron 30.0%
AATGATTTCTCAGACCAAAA+TGG - chr7_4:29016818-29016837 None:intergenic 30.0%
TTCAATCATTGTATTCCTTC+AGG + chr7_4:29017120-29017139 Msa1148630:intron 30.0%
TCAATCATTGTATTCCTTCA+GGG + chr7_4:29017121-29017140 Msa1148630:intron 30.0%
AGAAGAAAGTCCACTAAAAT+CGG + chr7_4:29017183-29017202 Msa1148630:CDS 30.0%
!! TCTATACTAACCGATTTTAG+TGG - chr7_4:29017196-29017215 None:intergenic 30.0%
!! CTTTTGCTGATGCATTTTTT+TGG + chr7_4:29017262-29017281 Msa1148630:intron 30.0%
! TCTAACTTGTACTACTTGTT+TGG + chr7_4:29017408-29017427 Msa1148630:intron 30.0%
!! TTTTTGCAGCTTTAGTAAAC+AGG - chr7_4:29017445-29017464 None:intergenic 30.0%
!! GTGTAACTTTCTTAGTCTTT+TGG + chr7_4:29017529-29017548 Msa1148630:three_prime_UTR 30.0%
! TAACACCTTTTTGTTAATGC+AGG - chr7_4:29017687-29017706 None:intergenic 30.0%
!! TTTGGATTTTGACGCACTTT+TGG - chr7_4:29012533-29012552 None:intergenic 35.0%
! AAAGTAGTGACCGTTTGTTT+TGG - chr7_4:29012556-29012575 None:intergenic 35.0%
!! TTGTTATTGTTGGGGGTTTT+TGG - chr7_4:29012695-29012714 None:intergenic 35.0%
! AAATGGGGTTGTTATTGTTG+GGG - chr7_4:29012703-29012722 None:intergenic 35.0%
! GAAATGGGGTTGTTATTGTT+GGG - chr7_4:29012704-29012723 None:intergenic 35.0%
! TGAAATGGGGTTGTTATTGT+TGG - chr7_4:29012705-29012724 None:intergenic 35.0%
TTACCTTGGAAACTGAAATG+GGG - chr7_4:29012718-29012737 None:intergenic 35.0%
CTTACCTTGGAAACTGAAAT+GGG - chr7_4:29012719-29012738 None:intergenic 35.0%
CATTTCAGTTTCCAAGGTAA+GGG + chr7_4:29012718-29012737 Msa1148630:CDS 35.0%
GGATTCATTCTTTGATCAAG+AGG + chr7_4:29013017-29013036 Msa1148630:CDS 35.0%
TGATCAAGAGGATAACAATG+TGG + chr7_4:29013029-29013048 Msa1148630:CDS 35.0%
GATCAAGAGGATAACAATGT+GGG + chr7_4:29013030-29013049 Msa1148630:CDS 35.0%
AATGCTACTGTGTTTGCTTA+TGG + chr7_4:29013108-29013127 Msa1148630:CDS 35.0%
TGGAAAGACATATACTATGC+AGG + chr7_4:29013143-29013162 Msa1148630:CDS 35.0%
GCAATAATGTATGGATCCTT+TGG + chr7_4:29013579-29013598 Msa1148630:intron 35.0%
!!! GAGAGCATTTCTAGCAATTT+TGG + chr7_4:29013685-29013704 Msa1148630:intron 35.0%
!!! AGCATTTCTAGCAATTTTGG+TGG + chr7_4:29013688-29013707 Msa1148630:intron 35.0%
!! TTTCTAGCAATTTTGGTGGA+AGG + chr7_4:29013692-29013711 Msa1148630:intron 35.0%
! ATGATTTTATCTCAAGGTGC+TGG + chr7_4:29013755-29013774 Msa1148630:intron 35.0%
!!! AAGATGTAGCTTTTGGAGTT+TGG + chr7_4:29013789-29013808 Msa1148630:intron 35.0%
CTGAACCCTAATCGTATATT+AGG + chr7_4:29013813-29013832 Msa1148630:intron 35.0%
GTAGAAGTGAGAAAAACTCT+AGG - chr7_4:29013878-29013897 None:intergenic 35.0%
TTGACAAATAGACAGGATAG+TGG - chr7_4:29014118-29014137 None:intergenic 35.0%
!!! CAGTGTTTTGACAAATAGAC+AGG - chr7_4:29014125-29014144 None:intergenic 35.0%
CTGTCTATTTGTCAAAACAC+TGG + chr7_4:29014123-29014142 Msa1148630:CDS 35.0%
TTCATACTATGAGGTCTACA+TGG + chr7_4:29014161-29014180 Msa1148630:CDS 35.0%
!! CACTTGCTTTTAACTCTAAG+AGG - chr7_4:29014200-29014219 None:intergenic 35.0%
! AGCAAGTGAGATTTCAGTTT+TGG + chr7_4:29014212-29014231 Msa1148630:CDS 35.0%
!!! TCAGTTTTGGATGACAAAGA+TGG + chr7_4:29014225-29014244 Msa1148630:CDS 35.0%
TACAATGTCCGAATTTCAAG+AGG + chr7_4:29014287-29014306 Msa1148630:CDS 35.0%
AAAACTGAACCTCATAGACT+TGG + chr7_4:29014443-29014462 Msa1148630:CDS 35.0%
GTTTGATGTATTCCAAGCAA+CGG + chr7_4:29014497-29014516 Msa1148630:CDS 35.0%
!! AATGCGTTTAAAGTTGATGC+AGG + chr7_4:29014528-29014547 Msa1148630:CDS 35.0%
CAGGTAATGAAGACAATAGA+AGG + chr7_4:29014547-29014566 Msa1148630:CDS 35.0%
AAGCTAAGATGCAATTCTCT+TGG - chr7_4:29014890-29014909 None:intergenic 35.0%
TTCCAATGTCTAGTCTAATG+CGG - chr7_4:29014960-29014979 None:intergenic 35.0%
TATGTGTGATTTCAGAATCC+AGG + chr7_4:29015153-29015172 Msa1148630:intron 35.0%
CATAAACTAGAGACACCAAA+AGG + chr7_4:29015252-29015271 Msa1148630:CDS 35.0%
TTCTAGCCAAGCTTTCAATT+TGG - chr7_4:29015295-29015314 None:intergenic 35.0%
TACTTTCAATAGCTCAGTGA+AGG + chr7_4:29015419-29015438 Msa1148630:CDS 35.0%
ACTTTCAATAGCTCAGTGAA+GGG + chr7_4:29015420-29015439 Msa1148630:CDS 35.0%
! CAGTAGTATGTTGAGCTTTT+TGG - chr7_4:29015464-29015483 None:intergenic 35.0%
ATACTACTGAGAGGTAAGTA+TGG + chr7_4:29015475-29015494 Msa1148630:intron 35.0%
! TTTTCTCTTACTGTGTAAGC+AGG + chr7_4:29015559-29015578 Msa1148630:intron 35.0%
TTTCTCTTACTGTGTAAGCA+GGG + chr7_4:29015560-29015579 Msa1148630:intron 35.0%
TCGAATAAATGCAAAGTGCA+GGG - chr7_4:29015952-29015971 None:intergenic 35.0%
ATCGAATAAATGCAAAGTGC+AGG - chr7_4:29015953-29015972 None:intergenic 35.0%
ATTTATCCAACTGTTCTGGT+TGG - chr7_4:29016032-29016051 None:intergenic 35.0%
! CAGTTTCGATTTACTGATTG+CGG + chr7_4:29016132-29016151 Msa1148630:intron 35.0%
TCAAAGACATAGTCTGAAGA+TGG - chr7_4:29016357-29016376 None:intergenic 35.0%
TTCAGACTATGTCTTTGACA+CGG + chr7_4:29016359-29016378 Msa1148630:CDS 35.0%
AAGAAAGGGTTTCAGGAAAA+TGG + chr7_4:29016409-29016428 Msa1148630:CDS 35.0%
ATTCAGTGAACCTTCTTTCA+AGG + chr7_4:29016650-29016669 Msa1148630:intron 35.0%
! TAGAGTTAAAGGTACATGCA+CGG + chr7_4:29016715-29016734 Msa1148630:intron 35.0%
ATTCAAACTGGAGATTCATG+TGG - chr7_4:29016748-29016767 None:intergenic 35.0%
!!! AGTGACCGTTTGTTTTGGTT+TGG - chr7_4:29012551-29012570 None:intergenic 40.0%
TGAAATTGAGGAGTGAGAGT+GGG - chr7_4:29012590-29012609 None:intergenic 40.0%
TTGAAATTGAGGAGTGAGAG+TGG - chr7_4:29012591-29012610 None:intergenic 40.0%
!! TATTGTTGGGGGTTTTTGGA+GGG - chr7_4:29012691-29012710 None:intergenic 40.0%
!! TTATTGTTGGGGGTTTTTGG+AGG - chr7_4:29012692-29012711 None:intergenic 40.0%
! AATGGGGTTGTTATTGTTGG+GGG - chr7_4:29012702-29012721 None:intergenic 40.0%
CCTTACCTTGGAAACTGAAA+TGG - chr7_4:29012720-29012739 None:intergenic 40.0%
CCATTTCAGTTTCCAAGGTA+AGG + chr7_4:29012717-29012736 Msa1148630:CDS 40.0%
CAAGGTAAGGGTCATAGTTA+GGG + chr7_4:29012730-29012749 Msa1148630:CDS 40.0%
TGGGTCATCACAATTTCTTG+TGG - chr7_4:29012780-29012799 None:intergenic 40.0%
AGAAGTTAGTCCGATGATAC+CGG + chr7_4:29013068-29013087 Msa1148630:CDS 40.0%
TTACATCCACCGAAAATAGC+CGG - chr7_4:29013090-29013109 None:intergenic 40.0%
TCCTTTGGCTATGCACAATT+TGG + chr7_4:29013594-29013613 Msa1148630:intron 40.0%
TCTAATGGTATTAATGCCGG+TGG + chr7_4:29013654-29013673 Msa1148630:intron 40.0%
ATGCTCTCTTCATTTACCAC+CGG - chr7_4:29013673-29013692 None:intergenic 40.0%
! GCTTCGTAAGATGTAGCTTT+TGG + chr7_4:29013782-29013801 Msa1148630:intron 40.0%
TATTAGGGATGTAGTAGCTG+TGG + chr7_4:29013829-29013848 Msa1148630:intron 40.0%
TGTAGTAGCTGTGGTGTAAT+TGG + chr7_4:29013838-29013857 Msa1148630:intron 40.0%
!! TTCTTGATATTGGTAGTGCC+TGG + chr7_4:29013966-29013985 Msa1148630:intron 40.0%
ACAGGCACATAAAAACAACC+AGG - chr7_4:29013987-29014006 None:intergenic 40.0%
!! TAAACGATGCTTGGTGTTTC+AGG + chr7_4:29014053-29014072 Msa1148630:intron 40.0%
!! AAACGATGCTTGGTGTTTCA+GGG + chr7_4:29014054-29014073 Msa1148630:intron 40.0%
! ACTCTAAGAGGTCGTAACAT+CGG - chr7_4:29014188-29014207 None:intergenic 40.0%
GGAGAAGACCTCTTGAAATT+CGG - chr7_4:29014298-29014317 None:intergenic 40.0%
AATAGAAGGAGCTGCAATGA+AGG + chr7_4:29014561-29014580 Msa1148630:CDS 40.0%
ATAGAAGGAGCTGCAATGAA+GGG + chr7_4:29014562-29014581 Msa1148630:CDS 40.0%
CACATTTGACAGTGCAAACA+AGG - chr7_4:29014622-29014641 None:intergenic 40.0%
ACAAACCAAGAACACCCTAT+AGG + chr7_4:29014661-29014680 Msa1148630:CDS 40.0%
CAAACCAAGAACACCCTATA+GGG + chr7_4:29014662-29014681 Msa1148630:CDS 40.0%
!! GTCAATTTGCTGTCCCTATA+GGG - chr7_4:29014678-29014697 None:intergenic 40.0%
CAAATTGACCCGTATATTGC+AGG + chr7_4:29014689-29014708 Msa1148630:CDS 40.0%
TAGAGAGTCCTGCAATATAC+GGG - chr7_4:29014700-29014719 None:intergenic 40.0%
CTAGAGAGTCCTGCAATATA+CGG - chr7_4:29014701-29014720 None:intergenic 40.0%
GTATATTGCAGGACTCTCTA+GGG + chr7_4:29014700-29014719 Msa1148630:CDS 40.0%
TATATTGCAGGACTCTCTAG+GGG + chr7_4:29014701-29014720 Msa1148630:CDS 40.0%
! AACTTATAGCTTTACCAGGC+AGG - chr7_4:29014751-29014770 None:intergenic 40.0%
CATGACAAGAAAGAGCTTGA+GGG + chr7_4:29014820-29014839 Msa1148630:intron 40.0%
ATGACAAGAAAGAGCTTGAG+GGG + chr7_4:29014821-29014840 Msa1148630:intron 40.0%
TCCAATGTCTAGTCTAATGC+GGG - chr7_4:29014959-29014978 None:intergenic 40.0%
ATTGGAAACGTCAACAACTG+TGG + chr7_4:29014973-29014992 Msa1148630:intron 40.0%
TCAGAATCCAGGAGAATATC+AGG + chr7_4:29015164-29015183 Msa1148630:intron 40.0%
ACAGATTCCTGATATTCTCC+TGG - chr7_4:29015174-29015193 None:intergenic 40.0%
! GTCTCTAGTTTATGAGCTGA+AGG - chr7_4:29015246-29015265 None:intergenic 40.0%
ACCAAAAGGTAACGTTGACA+TGG + chr7_4:29015266-29015285 Msa1148630:CDS 40.0%
! TCCATGTCAACGTTACCTTT+TGG - chr7_4:29015270-29015289 None:intergenic 40.0%
TGGAAGCCAAATTGAAAGCT+TGG + chr7_4:29015286-29015305 Msa1148630:CDS 40.0%
AAAGCTTGGCTAGAATCAAG+AGG + chr7_4:29015300-29015319 Msa1148630:CDS 40.0%
AAGAGCTCACAACAAAGACT+TGG + chr7_4:29015330-29015349 Msa1148630:CDS 40.0%
CCAGTTGTACAAAAAACTCC+CGG + chr7_4:29015366-29015385 Msa1148630:CDS 40.0%
AAGCTCAACATACTACTGAG+AGG + chr7_4:29015466-29015485 Msa1148630:CDS 40.0%
GCCACTAATGCTGAAAAAGA+CGG + chr7_4:29015705-29015724 Msa1148630:intron 40.0%
CCACTAATGCTGAAAAAGAC+GGG + chr7_4:29015706-29015725 Msa1148630:intron 40.0%
GCTATGTAGAACATGCATTC+TGG + chr7_4:29015828-29015847 Msa1148630:intron 40.0%
CACACAAGTAATGACATACC+AGG - chr7_4:29015927-29015946 None:intergenic 40.0%
GTAATTGCATTCACCGTAGT+TGG + chr7_4:29016006-29016025 Msa1148630:intron 40.0%
TGGTACTATGATCTGAACTG+TGG + chr7_4:29016163-29016182 Msa1148630:intron 40.0%
GCTGGTACATCTTTGCTTAA+GGG - chr7_4:29016274-29016293 None:intergenic 40.0%
TGCTGGTACATCTTTGCTTA+AGG - chr7_4:29016275-29016294 None:intergenic 40.0%
! AATGGACTTTGTAGTACTGC+TGG - chr7_4:29016292-29016311 None:intergenic 40.0%
! GGAGAGAGAGCTTTTCTTAA+TGG - chr7_4:29016310-29016329 None:intergenic 40.0%
TTCCTGAAACCCTTTCTTAG+TGG - chr7_4:29016407-29016426 None:intergenic 40.0%
TGCAAGAAGTTCTGCTTTGA+AGG + chr7_4:29016453-29016472 Msa1148630:CDS 40.0%
! TGTTAAGGCACCTTGAAAGA+AGG - chr7_4:29016663-29016682 None:intergenic 40.0%
AGAGGAGCTACTAGAGTTAA+AGG + chr7_4:29016704-29016723 Msa1148630:CDS 40.0%
!!! CTGTTCTTTAGGGTCCATTT+TGG + chr7_4:29016801-29016820 Msa1148630:intron 40.0%
AAAACAACCACGTGCATGTT+TGG + chr7_4:29016876-29016895 Msa1148630:intron 40.0%
GTTTGGATTGACGATGAGAT+TGG + chr7_4:29016893-29016912 Msa1148630:intron 40.0%
GTTTGGATGAGCAGTAAGTT+TGG - chr7_4:29016990-29017009 None:intergenic 40.0%
ATTGTATTCCTTCAGGGCAT+AGG + chr7_4:29017127-29017146 Msa1148630:intron 40.0%
!! TTAGTGGACTTTCTTCTCTG+AGG - chr7_4:29017180-29017199 None:intergenic 40.0%
!! GCATCAGCAAAAGCATTATG+AGG - chr7_4:29017255-29017274 None:intergenic 40.0%
TTAAGTGACCTGGAGAAGAT+TGG + chr7_4:29017295-29017314 Msa1148630:CDS 40.0%
ACTTGTACTACTTGTTTGGC+AGG + chr7_4:29017412-29017431 Msa1148630:intron 40.0%
! ACTCTTTGATGACAAAGCAG+AGG + chr7_4:29017466-29017485 Msa1148630:CDS 40.0%
!! ATTGTTGGGGGTTTTTGGAG+GGG - chr7_4:29012690-29012709 None:intergenic 45.0%
CAACCCCATTTCAGTTTCCA+AGG + chr7_4:29012712-29012731 Msa1148630:CDS 45.0%
CCTAACTATGACCCTTACCT+TGG - chr7_4:29012732-29012751 None:intergenic 45.0%
CCAAGGTAAGGGTCATAGTT+AGG + chr7_4:29012729-29012748 Msa1148630:CDS 45.0%
TTCTTGTGGTTTCGTGAGAG+AGG - chr7_4:29012766-29012785 None:intergenic 45.0%
ATCTCAAAGACCCACTTACC+AGG + chr7_4:29012858-29012877 Msa1148630:CDS 45.0%
TCGGAACGAGTGTTACAAGT+TGG + chr7_4:29012996-29013015 Msa1148630:CDS 45.0%
CCGAAAATAGCCGGTATCAT+CGG - chr7_4:29013081-29013100 None:intergenic 45.0%
!! CCGATGATACCGGCTATTTT+CGG + chr7_4:29013078-29013097 Msa1148630:CDS 45.0%
!! ATGATACCGGCTATTTTCGG+TGG + chr7_4:29013081-29013100 Msa1148630:CDS 45.0%
!! GTGTTTGCTTATGGTGCTAC+TGG + chr7_4:29013117-29013136 Msa1148630:CDS 45.0%
AAAGTGAACGAACCCACCTT+TGG + chr7_4:29013350-29013369 Msa1148630:intron 45.0%
! GTAAGTTTGAGTTCAGAGGG+TGG + chr7_4:29013408-29013427 Msa1148630:intron 45.0%
GCCAAATTGTGCATAGCCAA+AGG - chr7_4:29013598-29013617 None:intergenic 45.0%
! ACAATTTGGCTCAGCTCAGA+TGG + chr7_4:29013608-29013627 Msa1148630:intron 45.0%
GCTCAGATGGTTATAGCCAT+AGG + chr7_4:29013621-29013640 Msa1148630:intron 45.0%
!! CTAGCAATTTTGGTGGAAGG+AGG + chr7_4:29013695-29013714 Msa1148630:intron 45.0%
!! AGGATAGTGGACATTGCCAA+CGG - chr7_4:29014105-29014124 None:intergenic 45.0%
AAGATGGCCATATTCACCTC+AGG + chr7_4:29014241-29014260 Msa1148630:CDS 45.0%
AGATGGCCATATTCACCTCA+GGG + chr7_4:29014242-29014261 Msa1148630:CDS 45.0%
ATAGTCCCCTGAGGTGAATA+TGG - chr7_4:29014251-29014270 None:intergenic 45.0%
TTTCAAGAGGTCTTCTCCAG+TGG + chr7_4:29014300-29014319 Msa1148630:CDS 45.0%
TCTTCTCCAGTGGTATTCAG+AGG + chr7_4:29014310-29014329 Msa1148630:CDS 45.0%
!! TACTATCGACTCCTCCTGAT+GGG + chr7_4:29014400-29014419 Msa1148630:CDS 45.0%
ACAAGACTTCCATTCCCATC+AGG - chr7_4:29014417-29014436 None:intergenic 45.0%
! GGGAATGGAAGTCTTGTATG+TGG + chr7_4:29014420-29014439 Msa1148630:CDS 45.0%
AGGTTACCGTCCACTCAATT+GGG + chr7_4:29014467-29014486 Msa1148630:CDS 45.0%
CATTACCCCAATTGAGTGGA+CGG - chr7_4:29014476-29014495 None:intergenic 45.0%
GTCCACTCAATTGGGGTAAT+GGG + chr7_4:29014475-29014494 Msa1148630:CDS 45.0%
AACCCATTACCCCAATTGAG+TGG - chr7_4:29014480-29014499 None:intergenic 45.0%
GATGTATTCCAAGCAACGGA+AGG + chr7_4:29014501-29014520 Msa1148630:CDS 45.0%
CATTATGTCCTTCCGTTGCT+TGG - chr7_4:29014512-29014531 None:intergenic 45.0%
!! GGTCAATTTGCTGTCCCTAT+AGG - chr7_4:29014679-29014698 None:intergenic 45.0%
CGTATATTGCAGGACTCTCT+AGG + chr7_4:29014699-29014718 Msa1148630:CDS 45.0%
ATATTGCAGGACTCTCTAGG+GGG + chr7_4:29014702-29014721 Msa1148630:CDS 45.0%
GCATGACAAGAAAGAGCTTG+AGG + chr7_4:29014819-29014838 Msa1148630:intron 45.0%
TGACAAGAAAGAGCTTGAGG+GGG + chr7_4:29014822-29014841 Msa1148630:intron 45.0%
GGGGGTGATATATAAGCTGT+AGG + chr7_4:29014840-29014859 Msa1148630:intron 45.0%
AATGTCTAGTCTAATGCGGG+TGG - chr7_4:29014956-29014975 None:intergenic 45.0%
ACCCGCATTAGACTAGACAT+TGG + chr7_4:29014955-29014974 Msa1148630:intron 45.0%
! TTAGTTTGGCTGCTCGATCA+AGG + chr7_4:29015202-29015221 Msa1148630:CDS 45.0%
!!! CCGGGAGTTTTTTGTACAAC+TGG - chr7_4:29015369-29015388 None:intergenic 45.0%
TGATCTCCTAGCAGAGCTAA+TGG - chr7_4:29015397-29015416 None:intergenic 45.0%
TTCAATAGCTCAGTGAAGGG+TGG + chr7_4:29015423-29015442 Msa1148630:CDS 45.0%
TGAGTGAGTGTCACAAGTGA+AGG + chr7_4:29015646-29015665 Msa1148630:intron 45.0%
!!! CCCGTCTTTTTCAGCATTAG+TGG - chr7_4:29015709-29015728 None:intergenic 45.0%
! GAACATGCATTCTGGTGTTG+AGG + chr7_4:29015836-29015855 Msa1148630:intron 45.0%
TAAGAGAGAGACTGAGCATG+AGG + chr7_4:29015866-29015885 Msa1148630:CDS 45.0%
TGATTCCAGTGCTGCCTTAT+TGG - chr7_4:29015892-29015911 None:intergenic 45.0%
! TACTGATTGCGGTGAATGTG+TGG + chr7_4:29016143-29016162 Msa1148630:intron 45.0%
CTCTCTCCCATCAACATCAA+TGG + chr7_4:29016322-29016341 Msa1148630:CDS 45.0%
CAACCTGCTCCACTAAGAAA+GGG + chr7_4:29016395-29016414 Msa1148630:CDS 45.0%
AAACCCTTTCTTAGTGGAGC+AGG - chr7_4:29016401-29016420 None:intergenic 45.0%
CTCCACTAAGAAAGGGTTTC+AGG + chr7_4:29016402-29016421 Msa1148630:CDS 45.0%
CTTGCACTGAATTTGTCCAG+TGG - chr7_4:29016439-29016458 None:intergenic 45.0%
! TTTTGTCTCCTATGCCCTGA+AGG - chr7_4:29017138-29017157 None:intergenic 45.0%
TCAGGGCATAGGAGACAAAA+TGG + chr7_4:29017138-29017157 Msa1148630:intron 45.0%
CATGTTGCAGTTAAGTGACC+TGG + chr7_4:29017285-29017304 Msa1148630:intron 45.0%
AAGAGAGACCAATCTTCTCC+AGG - chr7_4:29017306-29017325 None:intergenic 45.0%
!! GATTGGTCTCTCTTTGAAGC+AGG + chr7_4:29017312-29017331 Msa1148630:CDS 45.0%
GTGGTTTCGTGAGAGAGGAA+GGG - chr7_4:29012761-29012780 None:intergenic 50.0%
TGTGGTTTCGTGAGAGAGGA+AGG - chr7_4:29012762-29012781 None:intergenic 50.0%
!! GCTTATGGTGCTACTGGTAG+TGG + chr7_4:29013123-29013142 Msa1148630:CDS 50.0%
! TTTGAGTTCAGAGGGTGGTG+AGG + chr7_4:29013413-29013432 Msa1148630:intron 50.0%
CAGGGAACTGAAGAACAACC+TGG + chr7_4:29014072-29014091 Msa1148630:intron 50.0%
GATGGCCATATTCACCTCAG+GGG + chr7_4:29014243-29014262 Msa1148630:CDS 50.0%
GAACTTGAGATAGTCCCCTG+AGG - chr7_4:29014260-29014279 None:intergenic 50.0%
TTTGCGCCTCTGAATACCAC+TGG - chr7_4:29014319-29014338 None:intergenic 50.0%
TCCTGCTGGATACGTCATTG+AGG - chr7_4:29014356-29014375 None:intergenic 50.0%
!! GTACTATCGACTCCTCCTGA+TGG + chr7_4:29014399-29014418 Msa1148630:CDS 50.0%
AGACTTCCATTCCCATCAGG+AGG - chr7_4:29014414-29014433 None:intergenic 50.0%
CTGAACCTCATAGACTTGGC+AGG + chr7_4:29014447-29014466 Msa1148630:CDS 50.0%
GGTAACCTGCCAAGTCTATG+AGG - chr7_4:29014455-29014474 None:intergenic 50.0%
CAGGTTACCGTCCACTCAAT+TGG + chr7_4:29014466-29014485 Msa1148630:CDS 50.0%
GGTTACCGTCCACTCAATTG+GGG + chr7_4:29014468-29014487 Msa1148630:CDS 50.0%
CGTCCACTCAATTGGGGTAA+TGG + chr7_4:29014474-29014493 Msa1148630:CDS 50.0%
! CTGTCCCTATAGGGTGTTCT+TGG - chr7_4:29014669-29014688 None:intergenic 50.0%
! AGCAGAGCTAATGGTGGAAC+CGG - chr7_4:29015388-29015407 None:intergenic 50.0%
!! GTTCCACCATTAGCTCTGCT+AGG + chr7_4:29015388-29015407 Msa1148630:CDS 50.0%
TCTCCTAGCAGAGCTAATGG+TGG - chr7_4:29015394-29015413 None:intergenic 50.0%
TACTGTGTAAGCAGGGCCTT+TGG + chr7_4:29015567-29015586 Msa1148630:intron 50.0%
GACTGAGCATGAGGCCAATA+AGG + chr7_4:29015875-29015894 Msa1148630:CDS 50.0%
! CTGTTCTGGTTGGCCAACTA+CGG - chr7_4:29016022-29016041 None:intergenic 50.0%
AGTTGGCCAACCAGAACAGT+TGG + chr7_4:29016023-29016042 Msa1148630:intron 50.0%
GTGGAGCAGGTTGCAGAAAA+AGG - chr7_4:29016388-29016407 None:intergenic 50.0%
GCAACCTGCTCCACTAAGAA+AGG + chr7_4:29016394-29016413 Msa1148630:CDS 50.0%
TCAGGAAAATGGCACTCCAC+TGG + chr7_4:29016420-29016439 Msa1148630:CDS 50.0%
CGTCAATCCAAACATGCACG+TGG - chr7_4:29016886-29016905 None:intergenic 50.0%
TTGAGGAGTGAGAGTGGGAG+AGG - chr7_4:29012585-29012604 None:intergenic 55.0%
! ACAACCTGGCTTGATGCCGT+TGG + chr7_4:29014086-29014105 Msa1148630:CDS 55.0%
ATTGCCAACGGCATCAAGCC+AGG - chr7_4:29014093-29014112 None:intergenic 55.0%
AGGCGCAAAACTGCACACAC+AGG + chr7_4:29014330-29014349 Msa1148630:CDS 55.0%
GCCTCAATGACGTATCCAGC+AGG + chr7_4:29014352-29014371 Msa1148630:CDS 55.0%
GACGTATCCAGCAGGAGTCA+TGG + chr7_4:29014360-29014379 Msa1148630:CDS 55.0%
AAGCACTCCATGACTCCTGC+TGG - chr7_4:29014370-29014389 None:intergenic 55.0%
TCGACTCCTCCTGATGGGAA+TGG + chr7_4:29014405-29014424 Msa1148630:CDS 55.0%
TACCAGGCAGGCAACCATGA+GGG - chr7_4:29014739-29014758 None:intergenic 55.0%
TTACCAGGCAGGCAACCATG+AGG - chr7_4:29014740-29014759 None:intergenic 55.0%
! GCAGAGCTAATGGTGGAACC+GGG - chr7_4:29015387-29015406 None:intergenic 55.0%
TGAGGCCAATAAGGCAGCAC+TGG + chr7_4:29015884-29015903 Msa1148630:CDS 55.0%
GGGATCTAGTCGTGCCCTCA+TGG + chr7_4:29014722-29014741 Msa1148630:CDS 60.0%
TGCCCTCATGGTTGCCTGCC+TGG + chr7_4:29014734-29014753 Msa1148630:CDS 65.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 29012517 29017744 29012517 ID=Msa1148630;Name=Msa1148630
chr7_4 mRNA 29012517 29017744 29012517 ID=Msa1148630-mRNA-1;Parent=Msa1148630;Name=Msa1148630-mRNA-1;_AED=0.08;_eAED=0.08;_QI=142|1|1|1|1|1|12|239|665
chr7_4 exon 29012517 29012879 29012517 ID=Msa1148630-mRNA-1:exon:7135;Parent=Msa1148630-mRNA-1
chr7_4 exon 29012996 29013164 29012996 ID=Msa1148630-mRNA-1:exon:7136;Parent=Msa1148630-mRNA-1
chr7_4 exon 29014075 29014755 29014075 ID=Msa1148630-mRNA-1:exon:7137;Parent=Msa1148630-mRNA-1
chr7_4 exon 29015168 29015487 29015168 ID=Msa1148630-mRNA-1:exon:7138;Parent=Msa1148630-mRNA-1
chr7_4 exon 29015581 29015644 29015581 ID=Msa1148630-mRNA-1:exon:7139;Parent=Msa1148630-mRNA-1
chr7_4 exon 29015837 29015927 29015837 ID=Msa1148630-mRNA-1:exon:7140;Parent=Msa1148630-mRNA-1
chr7_4 exon 29016266 29016474 29016266 ID=Msa1148630-mRNA-1:exon:7141;Parent=Msa1148630-mRNA-1
chr7_4 exon 29016559 29016605 29016559 ID=Msa1148630-mRNA-1:exon:7142;Parent=Msa1148630-mRNA-1
chr7_4 exon 29016704 29016725 29016704 ID=Msa1148630-mRNA-1:exon:7143;Parent=Msa1148630-mRNA-1
chr7_4 exon 29017142 29017204 29017142 ID=Msa1148630-mRNA-1:exon:7144;Parent=Msa1148630-mRNA-1
chr7_4 exon 29017295 29017333 29017295 ID=Msa1148630-mRNA-1:exon:7145;Parent=Msa1148630-mRNA-1
chr7_4 exon 29017434 29017744 29017434 ID=Msa1148630-mRNA-1:exon:7146;Parent=Msa1148630-mRNA-1
chr7_4 five_prime_UTR 29012517 29012658 29012517 ID=Msa1148630-mRNA-1:five_prime_utr;Parent=Msa1148630-mRNA-1
chr7_4 CDS 29012659 29012879 29012659 ID=Msa1148630-mRNA-1:cds;Parent=Msa1148630-mRNA-1
chr7_4 CDS 29012996 29013164 29012996 ID=Msa1148630-mRNA-1:cds;Parent=Msa1148630-mRNA-1
chr7_4 CDS 29014075 29014755 29014075 ID=Msa1148630-mRNA-1:cds;Parent=Msa1148630-mRNA-1
chr7_4 CDS 29015168 29015487 29015168 ID=Msa1148630-mRNA-1:cds;Parent=Msa1148630-mRNA-1
chr7_4 CDS 29015581 29015644 29015581 ID=Msa1148630-mRNA-1:cds;Parent=Msa1148630-mRNA-1
chr7_4 CDS 29015837 29015927 29015837 ID=Msa1148630-mRNA-1:cds;Parent=Msa1148630-mRNA-1
chr7_4 CDS 29016266 29016474 29016266 ID=Msa1148630-mRNA-1:cds;Parent=Msa1148630-mRNA-1
chr7_4 CDS 29016559 29016605 29016559 ID=Msa1148630-mRNA-1:cds;Parent=Msa1148630-mRNA-1
chr7_4 CDS 29016704 29016725 29016704 ID=Msa1148630-mRNA-1:cds;Parent=Msa1148630-mRNA-1
chr7_4 CDS 29017142 29017204 29017142 ID=Msa1148630-mRNA-1:cds;Parent=Msa1148630-mRNA-1
chr7_4 CDS 29017295 29017333 29017295 ID=Msa1148630-mRNA-1:cds;Parent=Msa1148630-mRNA-1
chr7_4 CDS 29017434 29017505 29017434 ID=Msa1148630-mRNA-1:cds;Parent=Msa1148630-mRNA-1
chr7_4 three_prime_UTR 29017506 29017744 29017506 ID=Msa1148630-mRNA-1:three_prime_utr;Parent=Msa1148630-mRNA-1
Gene Sequence

>Msa1148630

ATGGCTACTACTCTTAATTACTCATGCACCCCTCCAAAAACCCCCAACAATAACAACCCCATTTCAGTTTCCAAGGTAAGGGTCATAGTTAGGGTTAGACCCTTCCTCTCTCACGAAACCACAAGAAATTGTGATGACCCAGTTTCTTGTATCTCACTTTTAGATCAAGATTTTCAATCTCAAAATGATGTAGCAGTTTATCTCAAAGACCCACTTACCAGTCGGAACGAGTGTTACAAGTTGGATTCATTCTTTGATCAAGAGGATAACAATGTGGGTCAGATATTTGAGAGAGAAGTTAGTCCGATGATACCGGCTATTTTCGGTGGATGTAATGCTACTGTGTTTGCTTATGGTGCTACTGGTAGTGGAAAGACATATACTATGCAGGGAACTGAAGAACAACCTGGCTTGATGCCGTTGGCAATGTCCACTATCCTGTCTATTTGTCAAAACACTGGTAGCACAGCTCAAATTTCATACTATGAGGTCTACATGGACCGATGTTACGACCTCTTAGAGTTAAAAGCAAGTGAGATTTCAGTTTTGGATGACAAAGATGGCCATATTCACCTCAGGGGACTATCTCAAGTTCCTGTAAATACAATGTCCGAATTTCAAGAGGTCTTCTCCAGTGGTATTCAGAGGCGCAAAACTGCACACACAGGCCTCAATGACGTATCCAGCAGGAGTCATGGAGTGCTTGTGATATCTGTACTATCGACTCCTCCTGATGGGAATGGAAGTCTTGTATGTGGAAAACTGAACCTCATAGACTTGGCAGGTTACCGTCCACTCAATTGGGGTAATGGGTTTGATGTATTCCAAGCAACGGAAGGACATAATGCGTTTAAAGTTGATGCAGGTAATGAAGACAATAGAAGGAGCTGCAATGAAGGGATTCGTCTTCAAGAGAGTGCTAAGATAAATCAGTCCTTGTTTGCACTGTCAAATGTGATATATGCGTTGAACAACAACAAACCAAGAACACCCTATAGGGACAGCAAATTGACCCGTATATTGCAGGACTCTCTAGGGGGATCTAGTCGTGCCCTCATGGTTGCCTGCCTGAATCCAGGAGAATATCAGGAATCTGTTCATACTGTTAGTTTGGCTGCTCGATCAAGGCACGTCTCTAATTTTGTACCTTCAGCTCATAAACTAGAGACACCAAAAGGTAACGTTGACATGGAAGCCAAATTGAAAGCTTGGCTAGAATCAAGAGGTAAGTCAAAGAGCTCACAACAAAGACTTGGAGCATTTAATTCTCCAGTTGTACAAAAAACTCCCGGTTCCACCATTAGCTCTGCTAGGAGATCAGTTACTTTCAATAGCTCAGTGAAGGGTGGCAGAACTTTCATCAACCAAAAAGCTCAACATACTACTGAGAGGGCCTTTGGAGTTTCTTTTAGAAATTTACTAGATGGTGAAGTTGCTTTTGATTCTTGCAAAAAGAACATGCATTCTGGTGTTGAGGACAATGATAAGAGAGAGACTGAGCATGAGGCCAATAAGGCAGCACTGGAATCATATAATGATGTACCTGATGAACCCTTAAGCAAAGATGTACCAGCAGTACTACAAAGTCCATTAAGAAAAGCTCTCTCTCCCATCAACATCAATGGTATTCAAAACCATCTTCAGACTATGTCTTTGACACGGACACCTTTTTCTGCAACCTGCTCCACTAAGAAAGGGTTTCAGGAAAATGGCACTCCACTGGACAAATTCAGTGCAAGAAGTTCTGCTTTGAAGAACTGTCTAGTTCAAGAATACATTGATTTGTTAAATAATGCAAGCAGAGAGGAGCTACTAGAGTTAAAGGGCATAGGAGACAAAATGGCAGATTACATTATTGACCTCAGAGAAGAAAGTCCACTAAAATCGTTAAGTGACCTGGAGAAGATTGGTCTCTCTTTGAAGCAGGCTCATAACCTGTTTACTAAAGCTGCAAAAAAACTCTTTGATGACAAAGCAGAGGATTCAATACTCAATTGA
Protein sequence

>Msa1148630

MATTLNYSCTPPKTPNNNNPISVSKVRVIVRVRPFLSHETTRNCDDPVSCISLLDQDFQSQNDVAVYLKDPLTSRNECYKLDSFFDQEDNNVGQIFEREVSPMIPAIFGGCNATVFAYGATGSGKTYTMQGTEEQPGLMPLAMSTILSICQNTGSTAQISYYEVYMDRCYDLLELKASEISVLDDKDGHIHLRGLSQVPVNTMSEFQEVFSSGIQRRKTAHTGLNDVSSRSHGVLVISVLSTPPDGNGSLVCGKLNLIDLAGYRPLNWGNGFDVFQATEGHNAFKVDAGNEDNRRSCNEGIRLQESAKINQSLFALSNVIYALNNNKPRTPYRDSKLTRILQDSLGGSSRALMVACLNPGEYQESVHTVSLAARSRHVSNFVPSAHKLETPKGNVDMEAKLKAWLESRGKSKSSQQRLGAFNSPVVQKTPGSTISSARRSVTFNSSVKGGRTFINQKAQHTTERAFGVSFRNLLDGEVAFDSCKKNMHSGVEDNDKRETEHEANKAALESYNDVPDEPLSKDVPAVLQSPLRKALSPININGIQNHLQTMSLTRTPFSATCSTKKGFQENGTPLDKFSARSSALKNCLVQEYIDLLNNASREELLELKGIGDKMADYIIDLREESPLKSLSDLEKIGLSLKQAHNLFTKAAKKLFDDKAEDSILN*