AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0554300

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0554300 MtrunA17_Chr4g0040361 95.086 753 31 2 1 753 1 747 0.0 1385
Msa0554300 MtrunA17_Chr5g0398421 28.008 507 265 12 16 520 28 436 5.87e-38 148
Msa0554300 MtrunA17_Chr4g0056701 38.119 202 106 8 319 516 221 407 3.26e-21 97.4
Msa0554300 MtrunA17_Chr7g0218721 32.692 156 101 3 580 732 277 431 1.05e-15 80.5
Msa0554300 MtrunA17_Chr6g0454541 25.943 212 97 4 524 734 310 462 3.57e-14 75.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0554300 AT1G03780.2 57.234 781 268 13 3 751 5 751 0.0 736
Msa0554300 AT1G03780.3 57.234 781 268 13 3 751 5 751 0.0 736
Msa0554300 AT1G03780.1 49.670 757 229 14 4 689 6 681 0.0 590
Msa0554300 AT4G22860.1 30.174 517 267 19 15 525 19 447 7.96e-40 154
Msa0554300 AT5G44270.1 60.577 104 40 1 635 737 192 295 1.63e-33 131
Msa0554300 AT4G22860.2 35.048 311 134 13 219 525 193 439 2.81e-29 123
Msa0554300 AT4G11990.1 39.189 222 119 8 311 530 238 445 5.07e-26 113
Msa0554300 AT4G22860.3 26.768 396 213 11 15 408 19 339 2.00e-23 103
Msa0554300 AT3G01015.1 28.444 225 101 4 524 747 306 471 2.58e-18 89.4
Msa0554300 AT5G15510.1 30.380 158 105 3 587 740 318 474 2.42e-13 73.6
Msa0554300 AT5G15510.2 30.657 137 91 2 587 720 318 453 2.47e-11 67.4
Msa0554300 AT5G15510.4 30.657 137 91 2 587 720 318 453 4.38e-11 66.2
Msa0554300 AT5G15510.3 30.657 137 91 2 587 720 318 453 4.38e-11 66.2

Find 205 sgRNAs with CRISPR-Local

Find 365 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCCCAACCACCAGAGTTTA+AGG 0.198968 4_1:+51566656 Msa0554300:CDS
AGGGGTCTTGCCTTGAATTT+AGG 0.214809 4_1:-51567048 None:intergenic
ATTTCTGCCATTGATTTAAA+TGG 0.217117 4_1:-51566170 None:intergenic
CGCTGATTTGTCTCAAATTC+AGG 0.224630 4_1:-51566387 None:intergenic
AGCACAGATGAGAAAATTTA+AGG 0.234244 4_1:+51567938 Msa0554300:CDS
ACGGGATAGTCGGTGGTATA+GGG 0.241791 4_1:-51567711 None:intergenic
TCAAGTATCATAAACTTATA+TGG 0.247737 4_1:-51569026 None:intergenic
TTGCGGACCTTCTCTGGAAC+TGG 0.248620 4_1:-51568133 None:intergenic
GTTTGGAGTAGTGGAGGTTT+AGG 0.259564 4_1:-51566955 None:intergenic
GCCTCATGATAAGTCAAAAC+TGG 0.259780 4_1:+51565953 Msa0554300:CDS
GGTGGTTGGGGTGTACTTCT+TGG 0.275186 4_1:-51566645 None:intergenic
GCGTGTTTGTGTAATGTAAT+TGG 0.276229 4_1:-51563998 None:intergenic
CTTGAAAATTATGATTCTTT+TGG 0.279123 4_1:+51569044 Msa0554300:three_prime_UTR
TGGTGCATCCTCTTTCTTAA+TGG 0.281184 4_1:-51565380 None:intergenic
TACCTTAAACTCTGGTGGTT+GGG 0.282481 4_1:-51566658 None:intergenic
AACCATTGAACCGTCTTCTT+TGG 0.291708 4_1:-51568724 None:intergenic
TTTGAAAGTAAAGGGGATAT+TGG 0.292403 4_1:+51567169 Msa0554300:CDS
CATTGTTTGGGTTCTGGCTT+TGG 0.293707 4_1:-51567819 None:intergenic
AAGAGAATCAAGCCATTAAA+AGG 0.304218 4_1:+51565782 Msa0554300:CDS
GGATTTGGAGTAGTGGTTCT+TGG 0.304430 4_1:-51567478 None:intergenic
GGCAAGACCCCTAAATAAAA+AGG 0.305952 4_1:+51567059 Msa0554300:CDS
TACCAATATTAATGTTGAAT+TGG 0.314212 4_1:-51568953 None:intergenic
TTTGTGCATTGTTTGGGTTC+TGG 0.314392 4_1:-51567825 None:intergenic
CGGTAACATGTTTCTTCATA+TGG 0.323397 4_1:-51567201 None:intergenic
ACCTTCTCTGGAACTGGGAT+TGG 0.327953 4_1:-51568127 None:intergenic
ACCCTAATCGGAATTGAAAA+TGG 0.330518 4_1:+51564057 Msa0554300:exon
ATCAGATCTTTGAAAGTAAA+GGG 0.335407 4_1:+51567161 Msa0554300:intron
GAGGAGGGAACCGGCGGTGG+TGG 0.337521 4_1:+51564085 Msa0554300:CDS
AGGGGTTTGCGGACCTTCTC+TGG 0.337968 4_1:-51568139 None:intergenic
AGTGTTCGAGCCTTGAATTT+TGG 0.340321 4_1:-51566471 None:intergenic
TACCAATTCAACATTAATAT+TGG 0.343304 4_1:+51568951 Msa0554300:three_prime_UTR
TGCTGACTGTAATCGAGTTT+TGG 0.352206 4_1:-51565722 None:intergenic
CACGGGATAGTCGGTGGTAT+AGG 0.356163 4_1:-51567712 None:intergenic
CTGCTGCTTCTTAGAATTAG+TGG 0.364095 4_1:-51565674 None:intergenic
CTTTGGAGTACACGCAAGTT+TGG 0.367595 4_1:-51568707 None:intergenic
ACCTTAAACTCTGGTGGTTG+GGG 0.367724 4_1:-51566657 None:intergenic
GGCGGGCCCTTAGTGATGTT+TGG 0.375846 4_1:-51566972 None:intergenic
AGAACTCTATCTTCAGCCTT+TGG 0.379369 4_1:-51565175 None:intergenic
TAGGGGTATGGGTTAGCCTT+TGG 0.381692 4_1:-51567693 None:intergenic
TTTAATGGCTTGATTCTCTT+GGG 0.383536 4_1:-51565779 None:intergenic
CAAACTCTTGAACTTGTGTA+AGG 0.389176 4_1:-51568159 None:intergenic
GGCCTGGTCAATGTTAGTTT+CGG 0.392621 4_1:-51566357 None:intergenic
AATTTCATACAAACCCTAAT+CGG 0.393141 4_1:+51564045 Msa0554300:five_prime_UTR
TTAAGATTATGAACTGTTTG+AGG 0.393608 4_1:+51568978 Msa0554300:three_prime_UTR
TTCAAGAACTCTTGAATCCT+TGG 0.398182 4_1:+51568814 Msa0554300:three_prime_UTR
GTGGAGGAGGGAACCGGCGG+TGG 0.399035 4_1:+51564082 Msa0554300:CDS
AAAACCAGAGCCCTTTCAAT+TGG 0.401190 4_1:+51567845 Msa0554300:CDS
ATTCTTCGATTTCTTGAAAG+TGG 0.405014 4_1:+51564150 Msa0554300:CDS
GCAGCGCTCTTCACTCTAGC+AGG 0.405444 4_1:-51566417 None:intergenic
TGAAAAGATTCCTAAATTCA+AGG 0.408870 4_1:+51567038 Msa0554300:CDS
GGCTAAAATGCCAAAATTCA+AGG 0.414969 4_1:+51566461 Msa0554300:CDS
TGAATCCTTGGCACCTCCCT+AGG 0.418906 4_1:+51568826 Msa0554300:three_prime_UTR
TACACGCAAGTTTGGTGACT+TGG 0.420538 4_1:-51568699 None:intergenic
CTTAGTGATGTTTGGAGTAG+TGG 0.422991 4_1:-51566964 None:intergenic
GTCTAGTTTACCTTAAACTC+TGG 0.423963 4_1:-51566666 None:intergenic
TGTTTGGGTTCTGGCTTTGG+TGG 0.424354 4_1:-51567816 None:intergenic
CCTTCTCTGGAACTGGGATT+GGG 0.424705 4_1:-51568126 None:intergenic
GTGTGCAGATGGAATGGATT+TGG 0.425293 4_1:-51567493 None:intergenic
TGCTACTAGCATGAGATGAC+TGG 0.425907 4_1:+51568763 Msa0554300:exon
TAGTCGGTGGTATAGGGGTA+TGG 0.426434 4_1:-51567705 None:intergenic
ATAGATTAAGGAGAAAGAAA+TGG 0.428455 4_1:+51568336 Msa0554300:intron
TTGATTCTCTTGGGTGAAGT+GGG 0.432158 4_1:-51565770 None:intergenic
ATGGCGGTGGAGGAGGGAAC+CGG 0.433272 4_1:+51564076 Msa0554300:CDS
TATCAGATCTGATCAAAGTT+TGG 0.434007 4_1:+51568789 Msa0554300:three_prime_UTR
CCATGTGAGAAGCAATTGTA+AGG 0.434855 4_1:-51565267 None:intergenic
AAAGTGAAATTCTTGAGGTT+CGG 0.436411 4_1:-51567221 None:intergenic
CTTGATTCTCTTGGGTGAAG+TGG 0.439963 4_1:-51565771 None:intergenic
TATCAGATCTTTGAAAGTAA+AGG 0.440765 4_1:+51567160 Msa0554300:intron
TTGGGGTGTACTTCTTGGCA+TGG 0.443190 4_1:-51566640 None:intergenic
GCAGCCACAAAGAGCACGGC+AGG 0.443922 4_1:+51565742 Msa0554300:CDS
TTCAACAGATGCTCCTCCTA+TGG 0.448300 4_1:-51565593 None:intergenic
GGATTATTAAAGTTTGGAAC+TGG 0.449864 4_1:-51568551 None:intergenic
CTCTCCAATTGAAAGGGCTC+TGG 0.450467 4_1:-51567849 None:intergenic
CTCATCAGAGGTGTCTCATA+AGG 0.453520 4_1:+51566820 Msa0554300:CDS
ACAAGAAGAAAGACTTAGAA+TGG 0.453851 4_1:+51567905 Msa0554300:CDS
ATTGAAAATGGCGGTGGAGG+AGG 0.455855 4_1:+51564069 Msa0554300:exon
GAACTTGTGTAAGGGGTTTG+CGG 0.457924 4_1:-51568150 None:intergenic
GTCTCAAATTCAGGTGACTT+AGG 0.466017 4_1:-51566378 None:intergenic
GTTTGGGTTCTGGCTTTGGT+GGG 0.467184 4_1:-51567815 None:intergenic
GAATTCTACCATTAAGAAAG+AGG 0.468972 4_1:+51565372 Msa0554300:intron
TTACCTTAAACTCTGGTGGT+TGG 0.469475 4_1:-51566659 None:intergenic
CTTGGAATTGTATTACGTGC+AGG 0.471005 4_1:-51567460 None:intergenic
AGTCATCTCATGCTAGTAGC+AGG 0.472789 4_1:-51568761 None:intergenic
GGAAAGTGAAGCAGCAAGAA+TGG 0.474998 4_1:+51568378 Msa0554300:CDS
TGCGGACCTTCTCTGGAACT+GGG 0.475779 4_1:-51568132 None:intergenic
GAGAAAGATGAAGAGAAAGA+AGG 0.482528 4_1:-51563946 None:intergenic
TGGGGTGTACTTCTTGGCAT+GGG 0.485252 4_1:-51566639 None:intergenic
AGTCCCTGCCGTGCTCTTTG+TGG 0.487308 4_1:-51565746 None:intergenic
AGCAGCACCATTTAAATCAA+TGG 0.491115 4_1:+51566163 Msa0554300:CDS
CTCATTAGAAATTGAGCAAG+AGG 0.492046 4_1:+51567011 Msa0554300:CDS
GAGCATTATTAGCAAAGTAA+AGG 0.494258 4_1:+51565219 Msa0554300:CDS
TTATCATGAGGCAAAGTTTG+AGG 0.496875 4_1:-51565942 None:intergenic
TCAGCCACTGCGGTAGGAGG+TGG 0.498536 4_1:-51567262 None:intergenic
AAAGAGTGTTGGCCAGTGGC+AGG 0.500844 4_1:-51566223 None:intergenic
CACTACTCCAAACATCACTA+AGG 0.502230 4_1:+51566965 Msa0554300:CDS
AACTCTTGAACTTGTGTAAG+GGG 0.507791 4_1:-51568157 None:intergenic
GGAATTTCATCTAGAAACAT+TGG 0.510227 4_1:+51566760 Msa0554300:intron
ACCTCAGTGTGCAGATGGAA+TGG 0.510925 4_1:-51567499 None:intergenic
AAAGGCTGAAGATAGAGTTC+TGG 0.513882 4_1:+51565177 Msa0554300:CDS
TTGAAAATGGCGGTGGAGGA+GGG 0.518626 4_1:+51564070 Msa0554300:exon
AGTAGCAGGGCTCGAAGTTG+TGG 0.520954 4_1:-51568747 None:intergenic
CTCCAAAGAAGACGGTTCAA+TGG 0.522425 4_1:+51568722 Msa0554300:CDS
CACTAGACTCTCCAATTGAA+AGG 0.523493 4_1:-51567856 None:intergenic
TAGTTTACCTTAAACTCTGG+TGG 0.523532 4_1:-51566663 None:intergenic
AACTCAGAATGAGGACAGAA+AGG 0.523648 4_1:+51565998 Msa0554300:CDS
ACATAATGTGTCTACAGTAA+TGG 0.525509 4_1:-51565128 None:intergenic
GCGGTGGAGGAGGGAACCGG+CGG 0.525633 4_1:+51564079 Msa0554300:CDS
GAAGCAGCAGAACTCTAAGA+AGG 0.526823 4_1:+51565687 Msa0554300:CDS
AACGAACCTCAGTGTGCAGA+TGG 0.527708 4_1:-51567504 None:intergenic
AGCATTCATGCCTAAAATCA+AGG 0.529753 4_1:+51565096 Msa0554300:intron
CCTCATGATAAGTCAAAACT+GGG 0.530787 4_1:+51565954 Msa0554300:CDS
AATCCGATGACGATGTTCGT+AGG 0.531687 4_1:+51564173 Msa0554300:CDS
ACTTCTTGGCATGGGAGGCA+AGG 0.532126 4_1:-51566631 None:intergenic
CCTTACAATTGCTTCTCACA+TGG 0.532493 4_1:+51565267 Msa0554300:CDS
TCATCTAGAAACATTGGCTA+GGG 0.534696 4_1:+51566766 Msa0554300:CDS
GGAATTGAAAATGGCGGTGG+AGG 0.535076 4_1:+51564066 Msa0554300:exon
AGTGATGTTTGGAGTAGTGG+AGG 0.535758 4_1:-51566961 None:intergenic
CGGGATAGTCGGTGGTATAG+GGG 0.535841 4_1:-51567710 None:intergenic
TTGATCATGTGGCAGGAAAG+AGG 0.537091 4_1:+51567600 Msa0554300:intron
AAACTCTTGAACTTGTGTAA+GGG 0.538706 4_1:-51568158 None:intergenic
ATTGATTTAAATGGTGCTGC+TGG 0.541984 4_1:-51566161 None:intergenic
GGCTCGAACACTAAATAAGA+AGG 0.542262 4_1:+51566482 Msa0554300:CDS
TTCAAGAAATCGAAGAATCT+CGG 0.544811 4_1:-51564145 None:intergenic
GGAGGAGCATCTGTTGAAGT+AGG 0.544968 4_1:+51565598 Msa0554300:CDS
GATCGTTGTGCCACCACCGC+CGG 0.546241 4_1:-51564095 None:intergenic
ATGTTCGTAGGGCTGAACTT+TGG 0.547569 4_1:+51564185 Msa0554300:CDS
ATCAAATTGTGCTCTATCCA+CGG 0.548732 4_1:-51568203 None:intergenic
GTTGCAAAGTGAAATTCTTG+AGG 0.549182 4_1:-51567226 None:intergenic
AAATTCAGGTGACTTAGGCC+TGG 0.549223 4_1:-51566373 None:intergenic
ACATGAGGAAGAAATGCAAA+GGG 0.551348 4_1:+51567881 Msa0554300:CDS
AGAAGGAGGGAAAACTAGAC+AGG 0.551575 4_1:+51565813 Msa0554300:CDS
TCTATCTATCAGGATGCTGT+TGG 0.552883 4_1:+51565523 Msa0554300:intron
TAGAGCACAATTTGATCAGA+AGG 0.553159 4_1:+51568210 Msa0554300:CDS
TTCATCTAGAAACATTGGCT+AGG 0.554100 4_1:+51566765 Msa0554300:CDS
TGATTCTCTTGGGTGAAGTG+GGG 0.558357 4_1:-51565769 None:intergenic
GGTGTACTTCTTGGCATGGG+AGG 0.559489 4_1:-51566636 None:intergenic
CCCAATCCCAGTTCCAGAGA+AGG 0.560804 4_1:+51568126 Msa0554300:CDS
TTTGCAGATAGAGGAAGAGA+AGG 0.561388 4_1:+51568487 Msa0554300:intron
AAATAATTCAACTTCTCTTG+AGG 0.562138 4_1:+51565420 Msa0554300:CDS
GAAGAGCGCTGCTGAGCATG+AGG 0.563027 4_1:+51566428 Msa0554300:CDS
GTCAGCAGCCACAAAGAGCA+CGG 0.563187 4_1:+51565738 Msa0554300:CDS
TTCATGCCTAAAATCAAGGC+TGG 0.563926 4_1:+51565100 Msa0554300:CDS
ACTAGACTCTCCAATTGAAA+GGG 0.564195 4_1:-51567855 None:intergenic
TACTAGCAAAACTCAGAATG+AGG 0.564329 4_1:+51565989 Msa0554300:CDS
ATCCGATGACGATGTTCGTA+GGG 0.564439 4_1:+51564174 Msa0554300:CDS
TGAATTTGAGACAAATCAGC+GGG 0.565017 4_1:+51566389 Msa0554300:CDS
GGTTTAGGTTCAGTGAGATG+AGG 0.565547 4_1:-51566940 None:intergenic
ATAAACACAGCGACATCCAT+AGG 0.565860 4_1:+51565577 Msa0554300:CDS
ACACGCAAGTTTGGTGACTT+GGG 0.566834 4_1:-51568698 None:intergenic
ACACTATTACAGAGACACCT+AGG 0.568444 4_1:-51568843 None:intergenic
ATCGGAATTGAAAATGGCGG+TGG 0.573398 4_1:+51564063 Msa0554300:exon
AGTCGGTGGTATAGGGGTAT+GGG 0.573848 4_1:-51567704 None:intergenic
TGAGCATGAGGAAGAAATGA+TGG 0.579227 4_1:+51566440 Msa0554300:CDS
AAATCAGCCACTGCGGTAGG+AGG 0.580750 4_1:-51567265 None:intergenic
CAGCGCTCTTCACTCTAGCA+GGG 0.580928 4_1:-51566416 None:intergenic
GGAAGCAACAAGGGTTCCAA+AGG 0.584855 4_1:+51567677 Msa0554300:CDS
TTCACTTTGCAACAAGTGAG+AGG 0.585436 4_1:+51567236 Msa0554300:CDS
AGGCACTGAAACAGATGAGA+AGG 0.589015 4_1:+51568507 Msa0554300:CDS
TAGTACGAGAGACCTGCCAC+TGG 0.589099 4_1:+51566211 Msa0554300:CDS
AATTACATGGGAAAGAGTGT+TGG 0.590862 4_1:-51566234 None:intergenic
TTCTCTTGAGGTATTAAGCG+TGG 0.591684 4_1:+51565432 Msa0554300:CDS
GTCATCTCATGCTAGTAGCA+GGG 0.592556 4_1:-51568760 None:intergenic
AATAAATCAGCCACTGCGGT+AGG 0.593305 4_1:-51567268 None:intergenic
AGCCCTACGAACATCGTCAT+CGG 0.602840 4_1:-51564176 None:intergenic
GAAAATGAGTAATCATAAAG+CGG 0.604132 4_1:+51565549 Msa0554300:CDS
GCTACTAGCATGAGATGACT+GGG 0.606598 4_1:+51568764 Msa0554300:exon
ATGGAATGGATTTGGAGTAG+TGG 0.607859 4_1:-51567485 None:intergenic
TTTGGAACTGGTCTAGCATG+AGG 0.611616 4_1:-51568539 None:intergenic
GACATGAGGAAGAAATGCAA+AGG 0.612700 4_1:+51567880 Msa0554300:CDS
CTGAATTTGAGACAAATCAG+CGG 0.614339 4_1:+51566388 Msa0554300:CDS
AGTGGCTGATTTATTTGACA+AGG 0.617787 4_1:+51567276 Msa0554300:CDS
GAAAGAGAAGAAACTGTACA+TGG 0.621766 4_1:+51567629 Msa0554300:CDS
AATGTAATTGGAGGGAAGTG+TGG 0.623373 4_1:-51563986 None:intergenic
CACTATTACAGAGACACCTA+GGG 0.627559 4_1:-51568842 None:intergenic
GGAGAGTCTAGTGAGACATG+AGG 0.627749 4_1:+51567866 Msa0554300:CDS
AACCGAAACTAACATTGACC+AGG 0.631638 4_1:+51566355 Msa0554300:CDS
TTGGAACTGGTCTAGCATGA+GGG 0.632293 4_1:-51568538 None:intergenic
ACTACTCCAAACATCACTAA+GGG 0.632859 4_1:+51566966 Msa0554300:CDS
AAAGGAAGATGATAGAGCCG+AGG 0.633440 4_1:+51565237 Msa0554300:CDS
AATTGGAAGAGGAAGCAACA+AGG 0.634739 4_1:+51567667 Msa0554300:CDS
ATTGGAAGAGGAAGCAACAA+GGG 0.636751 4_1:+51567668 Msa0554300:CDS
AGCTTCAAAAGCCTCATCAG+AGG 0.640671 4_1:+51566808 Msa0554300:CDS
TGGGAAAGAGTGTTGGCCAG+TGG 0.641745 4_1:-51566227 None:intergenic
AGACACCTAGGGAGGTGCCA+AGG 0.645124 4_1:-51568831 None:intergenic
CTTATGAGACACCTCTGATG+AGG 0.646858 4_1:-51566819 None:intergenic
ACATTTGAATCATCGAGCCG+TGG 0.648390 4_1:+51568186 Msa0554300:CDS
CAGCCACAAAGAGCACGGCA+GGG 0.651204 4_1:+51565743 Msa0554300:CDS
TTGTACCACGGGATAGTCGG+TGG 0.652413 4_1:-51567718 None:intergenic
TGAAGCTGACAATATGCCAA+AGG 0.653084 4_1:+51565159 Msa0554300:CDS
TCAGATCTTTGAAAGTAAAG+GGG 0.653685 4_1:+51567162 Msa0554300:intron
ACTTTGCTAATAATGCTCTG+TGG 0.655786 4_1:-51565214 None:intergenic
AGAAGGAGCATAAGATAAAG+CGG 0.661665 4_1:-51564215 None:intergenic
TGTTTGTGTAATGTAATTGG+AGG 0.662243 4_1:-51563995 None:intergenic
TGCGTGTACTCCAAAGAAGA+CGG 0.663597 4_1:+51568714 Msa0554300:CDS
AACACAGCGACATCCATAGG+AGG 0.663915 4_1:+51565580 Msa0554300:CDS
GTCAAATAAATCAGCCACTG+CGG 0.672423 4_1:-51567272 None:intergenic
GTTTCCACCTCCTACCGCAG+TGG 0.677524 4_1:+51567258 Msa0554300:CDS
AGAGGATGCACCATGCTGCG+AGG 0.678833 4_1:+51565390 Msa0554300:CDS
CTATACCACCGACTATCCCG+TGG 0.684644 4_1:+51567713 Msa0554300:CDS
GAAACAGATGAGAAGGACAA+TGG 0.686536 4_1:+51568514 Msa0554300:CDS
GTTTGTGTAATGTAATTGGA+GGG 0.686668 4_1:-51563994 None:intergenic
TATTACAGAGACACCTAGGG+AGG 0.700064 4_1:-51568839 None:intergenic
CTAATCGGAATTGAAAATGG+CGG 0.706738 4_1:+51564060 Msa0554300:exon
GGTATACAAACGATACAGAG+AGG 0.718065 4_1:+51568357 Msa0554300:CDS
TCCATTCCATCTGCACACTG+AGG 0.724592 4_1:+51567498 Msa0554300:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAATTCAATTATAAGATA+GGG + chr4_1:51564312-51564331 Msa0554300:intron 15.0%
!! TAACAATTTGATTAAGAAAT+AGG + chr4_1:51564722-51564741 Msa0554300:intron 15.0%
!! AAAAAAACATAAGTTACTAA+TGG - chr4_1:51566895-51566914 None:intergenic 15.0%
!!! TTATGTTTTTTTATTGAAAC+AGG + chr4_1:51566903-51566922 Msa0554300:intron 15.0%
!!! AAAAAAGAAGTAAATGATTT+TGG - chr4_1:51567406-51567425 None:intergenic 15.0%
!! TATAAAAATTAATCGAGAAT+TGG - chr4_1:51568319-51568338 None:intergenic 15.0%
!!! CGATTAATTTTTATAGATTA+AGG + chr4_1:51568324-51568343 Msa0554300:intron 15.0%
!! CAGAAATTCAATTATAAGAT+AGG + chr4_1:51564311-51564330 Msa0554300:intron 20.0%
!!! AGAAGTTGAATTATTTTCTT+CGG - chr4_1:51565416-51565435 None:intergenic 20.0%
!! ATAATATCTATCTATCTATC+AGG + chr4_1:51565513-51565532 Msa0554300:intron 20.0%
!!! TTCTAATTTTTGCCTTTTAA+TGG - chr4_1:51565797-51565816 None:intergenic 20.0%
!! ATTAAAAGGCAAAAATTAGA+AGG + chr4_1:51565796-51565815 Msa0554300:CDS 20.0%
!!! TGATTGAACTTTTTATGTAA+AGG + chr4_1:51566112-51566131 Msa0554300:intron 20.0%
!!! AATGTGATTGATAATTACAT+GGG - chr4_1:51566249-51566268 None:intergenic 20.0%
!! AAAAATATCTCTCTATTCTT+TGG - chr4_1:51566691-51566710 None:intergenic 20.0%
!!! ATAAGGTATTTTTTACTAAC+AGG + chr4_1:51566837-51566856 Msa0554300:intron 20.0%
!!! ACTATTACCTTTTTATTTAG+GGG - chr4_1:51567069-51567088 None:intergenic 20.0%
!!! CACTATTACCTTTTTATTTA+GGG - chr4_1:51567070-51567089 None:intergenic 20.0%
!!! TCACTATTACCTTTTTATTT+AGG - chr4_1:51567071-51567090 None:intergenic 20.0%
!! ATTCAGATGAAAAGAAATTT+AGG - chr4_1:51568092-51568111 None:intergenic 20.0%
!!! TTTAAAGTTGAAGACAAAAA+CGG - chr4_1:51568249-51568268 None:intergenic 20.0%
!! CAAAAAGGATTATTAAAGTT+TGG - chr4_1:51568560-51568579 None:intergenic 20.0%
!! TATTCAAAAGATGAAAAATG+GGG - chr4_1:51568627-51568646 None:intergenic 20.0%
!! GTATTCAAAAGATGAAAAAT+GGG - chr4_1:51568628-51568647 None:intergenic 20.0%
!! AGTATTCAAAAGATGAAAAA+TGG - chr4_1:51568629-51568648 None:intergenic 20.0%
!! TACCAATTCAACATTAATAT+TGG + chr4_1:51568951-51568970 Msa0554300:three_prime_UTR 20.0%
!! TACCAATATTAATGTTGAAT+TGG - chr4_1:51568956-51568975 None:intergenic 20.0%
!! TCAAGTATCATAAACTTATA+TGG - chr4_1:51569029-51569048 None:intergenic 20.0%
!!! CTTGAAAATTATGATTCTTT+TGG + chr4_1:51569044-51569063 Msa0554300:three_prime_UTR 20.0%
! AATTTCATACAAACCCTAAT+CGG + chr4_1:51564045-51564064 Msa0554300:five_prime_UTR 25.0%
!! GAGAAATTGATTTCGTAATT+AGG + chr4_1:51564279-51564298 Msa0554300:intron 25.0%
!!! TTTCAGATTTTTTGTTGCTT+AGG + chr4_1:51564554-51564573 Msa0554300:intron 25.0%
!!! TTCAGATTTTTTGTTGCTTA+GGG + chr4_1:51564555-51564574 Msa0554300:intron 25.0%
!!! TTTGATTTTGACTTGGTAAT+TGG + chr4_1:51564588-51564607 Msa0554300:intron 25.0%
!!! TTGATTTTGACTTGGTAATT+GGG + chr4_1:51564589-51564608 Msa0554300:intron 25.0%
! CTCTATATGATTCATACTAT+AGG + chr4_1:51564650-51564669 Msa0554300:intron 25.0%
! AACTGTGTTTCAATTATGTT+AGG + chr4_1:51564673-51564692 Msa0554300:intron 25.0%
! AAATAGGATACAATTTCTCA+AGG + chr4_1:51564738-51564757 Msa0554300:intron 25.0%
! AATAGGATACAATTTCTCAA+GGG + chr4_1:51564739-51564758 Msa0554300:intron 25.0%
! TAAAGTTAGTTAGATAGTTG+AGG - chr4_1:51564827-51564846 None:intergenic 25.0%
!!! AAGTAGTTAAGATTTGTTAG+TGG - chr4_1:51564851-51564870 None:intergenic 25.0%
!!! ATGAAACAAATTGCTTTTCA+AGG + chr4_1:51564940-51564959 Msa0554300:intron 25.0%
!!! ATCCTCATAGTTTTATGTTT+CGG + chr4_1:51564969-51564988 Msa0554300:intron 25.0%
!!! ATTGTTTCTATGATGTACAA+AGG + chr4_1:51565043-51565062 Msa0554300:intron 25.0%
!!! TTGTTTCTATGATGTACAAA+GGG + chr4_1:51565044-51565063 Msa0554300:intron 25.0%
! TGTTGGGTAATTACAAAAAA+TGG - chr4_1:51565305-51565324 None:intergenic 25.0%
! TTTGTAATTACCCAACAATT+TGG + chr4_1:51565308-51565327 Msa0554300:intron 25.0%
! AAAAATGAACTATGAGCAAA+TGG - chr4_1:51565350-51565369 None:intergenic 25.0%
! AAATAATTCAACTTCTCTTG+AGG + chr4_1:51565420-51565439 Msa0554300:CDS 25.0%
! AGACAATAGTAATAAAAACC+AGG - chr4_1:51565492-51565511 None:intergenic 25.0%
! GAAAATGAGTAATCATAAAG+CGG + chr4_1:51565549-51565568 Msa0554300:CDS 25.0%
!!! AGTTAAAGTTTGAGGTATTT+TGG - chr4_1:51565875-51565894 None:intergenic 25.0%
! ATAGCTAAAGATTGAAACAA+AGG - chr4_1:51566081-51566100 None:intergenic 25.0%
!!! ATTTCTGCCATTGATTTAAA+TGG - chr4_1:51566173-51566192 None:intergenic 25.0%
!! GAATGTGATTGATAATTACA+TGG - chr4_1:51566250-51566269 None:intergenic 25.0%
!! TGTTATTTACTCAGTCAAAT+AGG + chr4_1:51566545-51566564 Msa0554300:intron 25.0%
! TGAAAAGATTCCTAAATTCA+AGG + chr4_1:51567038-51567057 Msa0554300:CDS 25.0%
! AATGACAGAATGAAAATCTT+AGG - chr4_1:51567119-51567138 None:intergenic 25.0%
! GATCTGATAGATATACTATT+AGG - chr4_1:51567149-51567168 None:intergenic 25.0%
!! TATCAGATCTTTGAAAGTAA+AGG + chr4_1:51567160-51567179 Msa0554300:intron 25.0%
!! ATCAGATCTTTGAAAGTAAA+GGG + chr4_1:51567161-51567180 Msa0554300:intron 25.0%
! TCTGAAGGAAAAAAAAACTT+GGG - chr4_1:51567334-51567353 None:intergenic 25.0%
! ATCTGAAGGAAAAAAAAACT+TGG - chr4_1:51567335-51567354 None:intergenic 25.0%
! TACAATCTTCTATAATCTGA+AGG - chr4_1:51567349-51567368 None:intergenic 25.0%
! AATGTTGGTATTAGAAGAAT+TGG - chr4_1:51567579-51567598 None:intergenic 25.0%
! CAAAAGAAATTTAAACAACC+AGG + chr4_1:51568012-51568031 Msa0554300:intron 25.0%
! ATAGATTAAGGAGAAAGAAA+TGG + chr4_1:51568336-51568355 Msa0554300:intron 25.0%
! TTAAGATTATGAACTGTTTG+AGG + chr4_1:51568978-51568997 Msa0554300:three_prime_UTR 25.0%
GTTTGTGTAATGTAATTGGA+GGG - chr4_1:51563997-51564016 None:intergenic 30.0%
TGTTTGTGTAATGTAATTGG+AGG - chr4_1:51563998-51564017 None:intergenic 30.0%
TTCAAGAAATCGAAGAATCT+CGG - chr4_1:51564148-51564167 None:intergenic 30.0%
ATTCTTCGATTTCTTGAAAG+TGG + chr4_1:51564150-51564169 Msa0554300:CDS 30.0%
TTGTCAGAATGAAATTGTGA+AGG + chr4_1:51564426-51564445 Msa0554300:intron 30.0%
TTCTTCTTTCATTCACTACT+TGG + chr4_1:51564506-51564525 Msa0554300:intron 30.0%
TCTTCTTTCATTCACTACTT+GGG + chr4_1:51564507-51564526 Msa0554300:intron 30.0%
!!! GTGAAGTTTTGATTTTGACT+TGG + chr4_1:51564581-51564600 Msa0554300:intron 30.0%
TTGTTTCAAGGCTATTTGTA+AGG - chr4_1:51564804-51564823 None:intergenic 30.0%
!! CTAGTGCAACATAATTTGTT+AGG - chr4_1:51564904-51564923 None:intergenic 30.0%
CATTGATAAACAAAGTTCTC+TGG - chr4_1:51564995-51565014 None:intergenic 30.0%
ACATAATGTGTCTACAGTAA+TGG - chr4_1:51565131-51565150 None:intergenic 30.0%
GAGCATTATTAGCAAAGTAA+AGG + chr4_1:51565219-51565238 Msa0554300:CDS 30.0%
! AATTGTAAGGTTTTCTTCCT+CGG - chr4_1:51565257-51565276 None:intergenic 30.0%
TAACCAAGAACCAAATTGTT+GGG - chr4_1:51565321-51565340 None:intergenic 30.0%
ATAACCAAGAACCAAATTGT+TGG - chr4_1:51565322-51565341 None:intergenic 30.0%
GAATTCTACCATTAAGAAAG+AGG + chr4_1:51565372-51565391 Msa0554300:intron 30.0%
! GTATTAAGCGTGGTAATTTT+TGG + chr4_1:51565442-51565461 Msa0554300:intron 30.0%
AGGAGAAACAAGTTAGTTAT+GGG - chr4_1:51565472-51565491 None:intergenic 30.0%
!! TAATCGAGTTTTGGTATTTG+TGG - chr4_1:51565716-51565735 None:intergenic 30.0%
TTTAATGGCTTGATTCTCTT+GGG - chr4_1:51565782-51565801 None:intergenic 30.0%
! TTTTAATGGCTTGATTCTCT+TGG - chr4_1:51565783-51565802 None:intergenic 30.0%
AAGAGAATCAAGCCATTAAA+AGG + chr4_1:51565782-51565801 Msa0554300:CDS 30.0%
AAAAGGCAAAAATTAGAAGG+AGG + chr4_1:51565799-51565818 Msa0554300:CDS 30.0%
AAAGGCAAAAATTAGAAGGA+GGG + chr4_1:51565800-51565819 Msa0554300:CDS 30.0%
CTAGACAGGTAATTGTTAAA+AGG + chr4_1:51565827-51565846 Msa0554300:intron 30.0%
! TAAAAGGTCTTTTCGTTTTC+TGG + chr4_1:51565843-51565862 Msa0554300:intron 30.0%
GCTTGAATAGTTAAAGTTTG+AGG - chr4_1:51565883-51565902 None:intergenic 30.0%
AAACAAAGGAAATGATCGTA+AGG - chr4_1:51566067-51566086 None:intergenic 30.0%
TGCAACAAAAAGGTAAAACA+GGG - chr4_1:51566272-51566291 None:intergenic 30.0%
! CTAACATTTCCATTTTCATC+AGG + chr4_1:51566739-51566758 Msa0554300:intron 30.0%
GATGAAATTCCTGATGAAAA+TGG - chr4_1:51566751-51566770 None:intergenic 30.0%
GGAATTTCATCTAGAAACAT+TGG + chr4_1:51566760-51566779 Msa0554300:intron 30.0%
CAGAATGAAAATCTTAGGAT+TGG - chr4_1:51567114-51567133 None:intergenic 30.0%
! TCAGATCTTTGAAAGTAAAG+GGG + chr4_1:51567162-51567181 Msa0554300:intron 30.0%
TTTGAAAGTAAAGGGGATAT+TGG + chr4_1:51567169-51567188 Msa0554300:CDS 30.0%
AAAGTGAAATTCTTGAGGTT+CGG - chr4_1:51567224-51567243 None:intergenic 30.0%
GGTTAATGCAATACATTGAT+TGG + chr4_1:51567553-51567572 Msa0554300:intron 30.0%
!!! GGAACTTTTTCAGAAAGAAT+TGG + chr4_1:51567650-51567669 Msa0554300:CDS 30.0%
! TTTTCAGAAAGAATTGGAAG+AGG + chr4_1:51567656-51567675 Msa0554300:CDS 30.0%
! AAATGAACACTTTTGTACCA+CGG - chr4_1:51567733-51567752 None:intergenic 30.0%
!!! TGGTACAAAAGTGTTCATTT+TGG + chr4_1:51567733-51567752 Msa0554300:intron 30.0%
!!! TACAAAAGTGTTCATTTTGG+TGG + chr4_1:51567736-51567755 Msa0554300:intron 30.0%
ACAAGAAGAAAGACTTAGAA+TGG + chr4_1:51567905-51567924 Msa0554300:CDS 30.0%
AGCACAGATGAGAAAATTTA+AGG + chr4_1:51567938-51567957 Msa0554300:CDS 30.0%
! ATTGCTCACTCTTTTAATAC+TGG - chr4_1:51567969-51567988 None:intergenic 30.0%
TCGAAAAGAAAAAAAAGTCC+TGG - chr4_1:51568033-51568052 None:intergenic 30.0%
AAACTCTTGAACTTGTGTAA+GGG - chr4_1:51568161-51568180 None:intergenic 30.0%
AAATGATACAAGTAGATAGC+TGG + chr4_1:51568266-51568285 Msa0554300:intron 30.0%
! GGATTATTAAAGTTTGGAAC+TGG - chr4_1:51568554-51568573 None:intergenic 30.0%
GAAAAATGGGGATATAGTTT+AGG - chr4_1:51568615-51568634 None:intergenic 30.0%
TATCAGATCTGATCAAAGTT+TGG + chr4_1:51568789-51568808 Msa0554300:three_prime_UTR 30.0%
GAGAAAGATGAAGAGAAAGA+AGG - chr4_1:51563949-51563968 None:intergenic 35.0%
GCGTGTTTGTGTAATGTAAT+TGG - chr4_1:51564001-51564020 None:intergenic 35.0%
ACCCTAATCGGAATTGAAAA+TGG + chr4_1:51564057-51564076 Msa0554300:exon 35.0%
!! GCCATTTTCAATTCCGATTA+GGG - chr4_1:51564061-51564080 None:intergenic 35.0%
CTAATCGGAATTGAAAATGG+CGG + chr4_1:51564060-51564079 Msa0554300:exon 35.0%
! AGAAGGAGCATAAGATAAAG+CGG - chr4_1:51564218-51564237 None:intergenic 35.0%
! GGGTTTTCTTCTTTGAATCA+CGG + chr4_1:51564332-51564351 Msa0554300:intron 35.0%
! GGTTTTCTTCTTTGAATCAC+GGG + chr4_1:51564333-51564352 Msa0554300:intron 35.0%
! CTGTAGGAAAGTTGGAATTT+TGG + chr4_1:51564370-51564389 Msa0554300:intron 35.0%
!!! AGATTTTTTGTTGCTTAGGG+TGG + chr4_1:51564558-51564577 Msa0554300:intron 35.0%
!!! GATTTTTTGTTGCTTAGGGT+GGG + chr4_1:51564559-51564578 Msa0554300:intron 35.0%
! AGATAGTTGAGGTTGTTTCA+AGG - chr4_1:51564816-51564835 None:intergenic 35.0%
TGATGTACAAAGGGTTTACT+TGG + chr4_1:51565053-51565072 Msa0554300:intron 35.0%
AGCATTCATGCCTAAAATCA+AGG + chr4_1:51565096-51565115 Msa0554300:intron 35.0%
ACTTTGCTAATAATGCTCTG+TGG - chr4_1:51565217-51565236 None:intergenic 35.0%
!! TTACCCAACAATTTGGTTCT+TGG + chr4_1:51565315-51565334 Msa0554300:intron 35.0%
GGAGAAACAAGTTAGTTATG+GGG - chr4_1:51565471-51565490 None:intergenic 35.0%
CAGGAGAAACAAGTTAGTTA+TGG - chr4_1:51565473-51565492 None:intergenic 35.0%
!! CATAACTAACTTGTTTCTCC+TGG + chr4_1:51565471-51565490 Msa0554300:intron 35.0%
!!! TTTTTTCGCAATGCTGGTTT+TGG - chr4_1:51565640-51565659 None:intergenic 35.0%
!!! TTGACATTTTTTCGCAATGC+TGG - chr4_1:51565646-51565665 None:intergenic 35.0%
TTATCATGAGGCAAAGTTTG+AGG - chr4_1:51565945-51565964 None:intergenic 35.0%
CCTCATGATAAGTCAAAACT+GGG + chr4_1:51565954-51565973 Msa0554300:CDS 35.0%
TACTAGCAAAACTCAGAATG+AGG + chr4_1:51565989-51566008 Msa0554300:CDS 35.0%
!! ATTGATTTAAATGGTGCTGC+TGG - chr4_1:51566164-51566183 None:intergenic 35.0%
AGCAGCACCATTTAAATCAA+TGG + chr4_1:51566163-51566182 Msa0554300:CDS 35.0%
! AATTACATGGGAAAGAGTGT+TGG - chr4_1:51566237-51566256 None:intergenic 35.0%
GTGCAACAAAAAGGTAAAAC+AGG - chr4_1:51566273-51566292 None:intergenic 35.0%
! TTTACCTTTTTGTTGCACCT+TGG + chr4_1:51566275-51566294 Msa0554300:intron 35.0%
! TTACCTTTTTGTTGCACCTT+GGG + chr4_1:51566276-51566295 Msa0554300:intron 35.0%
!! TTTCGGTTTTGTCTGTATCA+AGG - chr4_1:51566343-51566362 None:intergenic 35.0%
! CTGAATTTGAGACAAATCAG+CGG + chr4_1:51566388-51566407 Msa0554300:CDS 35.0%
! TGAATTTGAGACAAATCAGC+GGG + chr4_1:51566389-51566408 Msa0554300:CDS 35.0%
GGCTAAAATGCCAAAATTCA+AGG + chr4_1:51566461-51566480 Msa0554300:CDS 35.0%
TAGTTTACCTTAAACTCTGG+TGG - chr4_1:51566666-51566685 None:intergenic 35.0%
! GTCTAGTTTACCTTAAACTC+TGG - chr4_1:51566669-51566688 None:intergenic 35.0%
! TTCATCTAGAAACATTGGCT+AGG + chr4_1:51566765-51566784 Msa0554300:CDS 35.0%
! TCATCTAGAAACATTGGCTA+GGG + chr4_1:51566766-51566785 Msa0554300:CDS 35.0%
ACTACTCCAAACATCACTAA+GGG + chr4_1:51566966-51566985 Msa0554300:CDS 35.0%
! TCTAATGAGCTTTTCACTGT+TGG - chr4_1:51567000-51567019 None:intergenic 35.0%
CTCATTAGAAATTGAGCAAG+AGG + chr4_1:51567011-51567030 Msa0554300:CDS 35.0%
CGGTAACATGTTTCTTCATA+TGG - chr4_1:51567204-51567223 None:intergenic 35.0%
GTTGCAAAGTGAAATTCTTG+AGG - chr4_1:51567229-51567248 None:intergenic 35.0%
! AGTGGCTGATTTATTTGACA+AGG + chr4_1:51567276-51567295 Msa0554300:CDS 35.0%
! GCTGATTTATTTGACAAGGT+GGG + chr4_1:51567280-51567299 Msa0554300:intron 35.0%
CTTCAAAGAAAGCTGCAAAA+TGG - chr4_1:51567434-51567453 None:intergenic 35.0%
TACCAACATTCTTGATCATG+TGG + chr4_1:51567589-51567608 Msa0554300:intron 35.0%
GAAAGAGAAGAAACTGTACA+TGG + chr4_1:51567629-51567648 Msa0554300:CDS 35.0%
! AATGAACACTTTTGTACCAC+GGG - chr4_1:51567732-51567751 None:intergenic 35.0%
!!! TCTGGTTTTGTGCATTGTTT+GGG - chr4_1:51567834-51567853 None:intergenic 35.0%
ACTAGACTCTCCAATTGAAA+GGG - chr4_1:51567858-51567877 None:intergenic 35.0%
ACATGAGGAAGAAATGCAAA+GGG + chr4_1:51567881-51567900 Msa0554300:CDS 35.0%
AACTCTTGAACTTGTGTAAG+GGG - chr4_1:51568160-51568179 None:intergenic 35.0%
CAAACTCTTGAACTTGTGTA+AGG - chr4_1:51568162-51568181 None:intergenic 35.0%
ATCAAATTGTGCTCTATCCA+CGG - chr4_1:51568206-51568225 None:intergenic 35.0%
TAGAGCACAATTTGATCAGA+AGG + chr4_1:51568210-51568229 Msa0554300:CDS 35.0%
AAGTAGATAGCTGGAAACAA+AGG + chr4_1:51568275-51568294 Msa0554300:intron 35.0%
!! ACTTACTTTTGTGGGCAAAA+AGG - chr4_1:51568575-51568594 None:intergenic 35.0%
!! GATGCATGACTTACTTTTGT+GGG - chr4_1:51568583-51568602 None:intergenic 35.0%
!! AGATGCATGACTTACTTTTG+TGG - chr4_1:51568584-51568603 None:intergenic 35.0%
TTCAAGAACTCTTGAATCCT+TGG + chr4_1:51568814-51568833 Msa0554300:three_prime_UTR 35.0%
AATGTAATTGGAGGGAAGTG+TGG - chr4_1:51563989-51564008 None:intergenic 40.0%
!! CGCCATTTTCAATTCCGATT+AGG - chr4_1:51564062-51564081 None:intergenic 40.0%
AGAGAATGATGCTTACGAGA+AGG - chr4_1:51564235-51564254 None:intergenic 40.0%
GGTTTGAATGTGAAGACTGT+AGG + chr4_1:51564354-51564373 Msa0554300:intron 40.0%
TGTGAAGACTGTAGGAAAGT+TGG + chr4_1:51564362-51564381 Msa0554300:intron 40.0%
!! AGTTGGAATTTTGGTGTGTG+TGG + chr4_1:51564379-51564398 Msa0554300:intron 40.0%
TGTGAAGGAGACAGTGAATT+AGG + chr4_1:51564441-51564460 Msa0554300:intron 40.0%
GTGAAGGAGACAGTGAATTA+GGG + chr4_1:51564442-51564461 Msa0554300:intron 40.0%
TATGTTAGGAACCCAAGACT+TGG + chr4_1:51564687-51564706 Msa0554300:intron 40.0%
TTCTTCCGAATCCAAGTCTT+GGG - chr4_1:51564701-51564720 None:intergenic 40.0%
TTTCTTCCGAATCCAAGTCT+TGG - chr4_1:51564702-51564721 None:intergenic 40.0%
AGCAGTGACACTATTGTGTA+GGG - chr4_1:51564769-51564788 None:intergenic 40.0%
GGCCGAAACATAAAACTATG+AGG - chr4_1:51564974-51564993 None:intergenic 40.0%
GTACAAAGGGTTTACTTGGT+CGG + chr4_1:51565057-51565076 Msa0554300:intron 40.0%
TTCATGCCTAAAATCAAGGC+TGG + chr4_1:51565100-51565119 Msa0554300:CDS 40.0%
! GATCTACCAGCCTTGATTTT+AGG - chr4_1:51565109-51565128 None:intergenic 40.0%
TGAAGCTGACAATATGCCAA+AGG + chr4_1:51565159-51565178 Msa0554300:CDS 40.0%
AGAACTCTATCTTCAGCCTT+TGG - chr4_1:51565178-51565197 None:intergenic 40.0%
AAAGGCTGAAGATAGAGTTC+TGG + chr4_1:51565177-51565196 Msa0554300:CDS 40.0%
CCATGTGAGAAGCAATTGTA+AGG - chr4_1:51565270-51565289 None:intergenic 40.0%
CCTTACAATTGCTTCTCACA+TGG + chr4_1:51565267-51565286 Msa0554300:CDS 40.0%
TGGTGCATCCTCTTTCTTAA+TGG - chr4_1:51565383-51565402 None:intergenic 40.0%
! TTCTCTTGAGGTATTAAGCG+TGG + chr4_1:51565432-51565451 Msa0554300:CDS 40.0%
TCTATCTATCAGGATGCTGT+TGG + chr4_1:51565523-51565542 Msa0554300:intron 40.0%
ATAAACACAGCGACATCCAT+AGG + chr4_1:51565577-51565596 Msa0554300:CDS 40.0%
! CTGCTGCTTCTTAGAATTAG+TGG - chr4_1:51565677-51565696 None:intergenic 40.0%
!! TGCTGACTGTAATCGAGTTT+TGG - chr4_1:51565725-51565744 None:intergenic 40.0%
TTGATTCTCTTGGGTGAAGT+GGG - chr4_1:51565773-51565792 None:intergenic 40.0%
!! GTCTTTTCGTTTTCTGGTGT+TGG + chr4_1:51565849-51565868 Msa0554300:intron 40.0%
GCCTCATGATAAGTCAAAAC+TGG + chr4_1:51565953-51565972 Msa0554300:CDS 40.0%
!!! CCCAGTTTTGACTTATCATG+AGG - chr4_1:51565957-51565976 None:intergenic 40.0%
AACTCAGAATGAGGACAGAA+AGG + chr4_1:51565998-51566017 Msa0554300:CDS 40.0%
!! AAAAGTACTCGAACATCCCA+AGG - chr4_1:51566295-51566314 None:intergenic 40.0%
AACCGAAACTAACATTGACC+AGG + chr4_1:51566355-51566374 Msa0554300:CDS 40.0%
GTCTCAAATTCAGGTGACTT+AGG - chr4_1:51566381-51566400 None:intergenic 40.0%
!! CGCTGATTTGTCTCAAATTC+AGG - chr4_1:51566390-51566409 None:intergenic 40.0%
TGAGCATGAGGAAGAAATGA+TGG + chr4_1:51566440-51566459 Msa0554300:CDS 40.0%
! AGTGTTCGAGCCTTGAATTT+TGG - chr4_1:51566474-51566493 None:intergenic 40.0%
GGCTCGAACACTAAATAAGA+AGG + chr4_1:51566482-51566501 Msa0554300:CDS 40.0%
TACCTTAAACTCTGGTGGTT+GGG - chr4_1:51566661-51566680 None:intergenic 40.0%
TTACCTTAAACTCTGGTGGT+TGG - chr4_1:51566662-51566681 None:intergenic 40.0%
! CTTAGTGATGTTTGGAGTAG+TGG - chr4_1:51566967-51566986 None:intergenic 40.0%
CACTACTCCAAACATCACTA+AGG + chr4_1:51566965-51566984 Msa0554300:CDS 40.0%
! ATGAGCTTTTCACTGTTGGT+GGG - chr4_1:51566996-51567015 None:intergenic 40.0%
! AATGAGCTTTTCACTGTTGG+TGG - chr4_1:51566997-51567016 None:intergenic 40.0%
GGCAAGACCCCTAAATAAAA+AGG + chr4_1:51567059-51567078 Msa0554300:CDS 40.0%
TTCACTTTGCAACAAGTGAG+AGG + chr4_1:51567236-51567255 Msa0554300:CDS 40.0%
GTCAAATAAATCAGCCACTG+CGG - chr4_1:51567275-51567294 None:intergenic 40.0%
! GGCTGATTTATTTGACAAGG+TGG + chr4_1:51567279-51567298 Msa0554300:intron 40.0%
GATTTATTTGACAAGGTGGG+TGG + chr4_1:51567283-51567302 Msa0554300:intron 40.0%
GGAAAAAAAAACTTGGGAGC+TGG - chr4_1:51567328-51567347 None:intergenic 40.0%
CTTGGAATTGTATTACGTGC+AGG - chr4_1:51567463-51567482 None:intergenic 40.0%
! ATGGAATGGATTTGGAGTAG+TGG - chr4_1:51567488-51567507 None:intergenic 40.0%
GAGGTTCGTTTCTTTCCATT+TGG + chr4_1:51567517-51567536 Msa0554300:intron 40.0%
CCTGTCAAGTTTCAACCAAA+TGG - chr4_1:51567535-51567554 None:intergenic 40.0%
CCATTTGGTTGAAACTTGAC+AGG + chr4_1:51567532-51567551 Msa0554300:intron 40.0%
TGCCACATGATCAAGAATGT+TGG - chr4_1:51567594-51567613 None:intergenic 40.0%
AACATTCTTGATCATGTGGC+AGG + chr4_1:51567593-51567612 Msa0554300:intron 40.0%
AATTGGAAGAGGAAGCAACA+AGG + chr4_1:51567667-51567686 Msa0554300:CDS 40.0%
ATTGGAAGAGGAAGCAACAA+GGG + chr4_1:51567668-51567687 Msa0554300:CDS 40.0%
! TTTGTGCATTGTTTGGGTTC+TGG - chr4_1:51567828-51567847 None:intergenic 40.0%
!!! CTCTGGTTTTGTGCATTGTT+TGG - chr4_1:51567835-51567854 None:intergenic 40.0%
AAAACCAGAGCCCTTTCAAT+TGG + chr4_1:51567845-51567864 Msa0554300:CDS 40.0%
CACTAGACTCTCCAATTGAA+AGG - chr4_1:51567859-51567878 None:intergenic 40.0%
GACATGAGGAAGAAATGCAA+AGG + chr4_1:51567880-51567899 Msa0554300:CDS 40.0%
TTCATCTGAATGTACCTTGC+AGG + chr4_1:51568101-51568120 Msa0554300:intron 40.0%
TCATCTGAATGTACCTTGCA+GGG + chr4_1:51568102-51568121 Msa0554300:intron 40.0%
GGTATACAAACGATACAGAG+AGG + chr4_1:51568357-51568376 Msa0554300:CDS 40.0%
TGAACGAACTTTGCAGATAG+AGG + chr4_1:51568478-51568497 Msa0554300:intron 40.0%
TTTGCAGATAGAGGAAGAGA+AGG + chr4_1:51568487-51568506 Msa0554300:intron 40.0%
GAAACAGATGAGAAGGACAA+TGG + chr4_1:51568514-51568533 Msa0554300:CDS 40.0%
AACCATTGAACCGTCTTCTT+TGG - chr4_1:51568727-51568746 None:intergenic 40.0%
CACTATTACAGAGACACCTA+GGG - chr4_1:51568845-51568864 None:intergenic 40.0%
ACACTATTACAGAGACACCT+AGG - chr4_1:51568846-51568865 None:intergenic 40.0%
ATCGGAATTGAAAATGGCGG+TGG + chr4_1:51564063-51564082 Msa0554300:exon 45.0%
AATCCGATGACGATGTTCGT+AGG + chr4_1:51564173-51564192 Msa0554300:CDS 45.0%
ATCCGATGACGATGTTCGTA+GGG + chr4_1:51564174-51564193 Msa0554300:CDS 45.0%
ATGTTCGTAGGGCTGAACTT+TGG + chr4_1:51564185-51564204 Msa0554300:CDS 45.0%
AGGAACCCAAGACTTGGATT+CGG + chr4_1:51564693-51564712 Msa0554300:intron 45.0%
GCAGTGACACTATTGTGTAG+GGG - chr4_1:51564768-51564787 None:intergenic 45.0%
GAGCAGTGACACTATTGTGT+AGG - chr4_1:51564770-51564789 None:intergenic 45.0%
AAAGGAAGATGATAGAGCCG+AGG + chr4_1:51565237-51565256 Msa0554300:CDS 45.0%
GCTTCTCACATGGTAATTGC+TGG + chr4_1:51565277-51565296 Msa0554300:intron 45.0%
TTCAACAGATGCTCCTCCTA+TGG - chr4_1:51565596-51565615 None:intergenic 45.0%
! GAAGCAGCAGAACTCTAAGA+AGG + chr4_1:51565687-51565706 Msa0554300:CDS 45.0%
TGATTCTCTTGGGTGAAGTG+GGG - chr4_1:51565772-51565791 None:intergenic 45.0%
CTTGATTCTCTTGGGTGAAG+TGG - chr4_1:51565774-51565793 None:intergenic 45.0%
AGAAGGAGGGAAAACTAGAC+AGG + chr4_1:51565813-51565832 Msa0554300:CDS 45.0%
!!! AATGGTGCTGCTGGTGTTTT+TGG - chr4_1:51566155-51566174 None:intergenic 45.0%
CATCCCAAGGTGCAACAAAA+AGG - chr4_1:51566282-51566301 None:intergenic 45.0%
! GGCCTGGTCAATGTTAGTTT+CGG - chr4_1:51566360-51566379 None:intergenic 45.0%
AAATTCAGGTGACTTAGGCC+TGG - chr4_1:51566376-51566395 None:intergenic 45.0%
ACCTTAAACTCTGGTGGTTG+GGG - chr4_1:51566660-51566679 None:intergenic 45.0%
AGCTTCAAAAGCCTCATCAG+AGG + chr4_1:51566808-51566827 Msa0554300:CDS 45.0%
CTTATGAGACACCTCTGATG+AGG - chr4_1:51566822-51566841 None:intergenic 45.0%
!! CTCATCAGAGGTGTCTCATA+AGG + chr4_1:51566820-51566839 Msa0554300:CDS 45.0%
! GGTTTAGGTTCAGTGAGATG+AGG - chr4_1:51566943-51566962 None:intergenic 45.0%
! GTTTGGAGTAGTGGAGGTTT+AGG - chr4_1:51566958-51566977 None:intergenic 45.0%
! AGTGATGTTTGGAGTAGTGG+AGG - chr4_1:51566964-51566983 None:intergenic 45.0%
AGGGGTCTTGCCTTGAATTT+AGG - chr4_1:51567051-51567070 None:intergenic 45.0%
AATAAATCAGCCACTGCGGT+AGG - chr4_1:51567271-51567290 None:intergenic 45.0%
! GGATTTGGAGTAGTGGTTCT+TGG - chr4_1:51567481-51567500 None:intergenic 45.0%
! GTGTGCAGATGGAATGGATT+TGG - chr4_1:51567496-51567515 None:intergenic 45.0%
TTGATCATGTGGCAGGAAAG+AGG + chr4_1:51567600-51567619 Msa0554300:intron 45.0%
! CTTTTGTACCACGGGATAGT+CGG - chr4_1:51567724-51567743 None:intergenic 45.0%
!! CATTGTTTGGGTTCTGGCTT+TGG - chr4_1:51567822-51567841 None:intergenic 45.0%
GAACTTGTGTAAGGGGTTTG+CGG - chr4_1:51568153-51568172 None:intergenic 45.0%
ACATTTGAATCATCGAGCCG+TGG + chr4_1:51568186-51568205 Msa0554300:CDS 45.0%
GGAAAGTGAAGCAGCAAGAA+TGG + chr4_1:51568378-51568397 Msa0554300:CDS 45.0%
!! AGGCACTGAAACAGATGAGA+AGG + chr4_1:51568507-51568526 Msa0554300:CDS 45.0%
! TTGGAACTGGTCTAGCATGA+GGG - chr4_1:51568541-51568560 None:intergenic 45.0%
! TTTGGAACTGGTCTAGCATG+AGG - chr4_1:51568542-51568561 None:intergenic 45.0%
TAGCTGCACTCTATTGCATC+AGG + chr4_1:51568657-51568676 Msa0554300:intron 45.0%
! ACACGCAAGTTTGGTGACTT+GGG - chr4_1:51568701-51568720 None:intergenic 45.0%
! TACACGCAAGTTTGGTGACT+TGG - chr4_1:51568702-51568721 None:intergenic 45.0%
!! CTTTGGAGTACACGCAAGTT+TGG - chr4_1:51568710-51568729 None:intergenic 45.0%
TGCGTGTACTCCAAAGAAGA+CGG + chr4_1:51568714-51568733 Msa0554300:CDS 45.0%
CTCCAAAGAAGACGGTTCAA+TGG + chr4_1:51568722-51568741 Msa0554300:CDS 45.0%
GTCATCTCATGCTAGTAGCA+GGG - chr4_1:51568763-51568782 None:intergenic 45.0%
AGTCATCTCATGCTAGTAGC+AGG - chr4_1:51568764-51568783 None:intergenic 45.0%
TGCTACTAGCATGAGATGAC+TGG + chr4_1:51568763-51568782 Msa0554300:exon 45.0%
GCTACTAGCATGAGATGACT+GGG + chr4_1:51568764-51568783 Msa0554300:exon 45.0%
TATTACAGAGACACCTAGGG+AGG - chr4_1:51568842-51568861 None:intergenic 45.0%
GGAATTGAAAATGGCGGTGG+AGG + chr4_1:51564066-51564085 Msa0554300:exon 50.0%
ATTGAAAATGGCGGTGGAGG+AGG + chr4_1:51564069-51564088 Msa0554300:exon 50.0%
TTGAAAATGGCGGTGGAGGA+GGG + chr4_1:51564070-51564089 Msa0554300:exon 50.0%
AGCCCTACGAACATCGTCAT+CGG - chr4_1:51564179-51564198 None:intergenic 50.0%
AACACAGCGACATCCATAGG+AGG + chr4_1:51565580-51565599 Msa0554300:CDS 50.0%
!! GGAGGAGCATCTGTTGAAGT+AGG + chr4_1:51565598-51565617 Msa0554300:CDS 50.0%
TGGGGTGTACTTCTTGGCAT+GGG - chr4_1:51566642-51566661 None:intergenic 50.0%
TTGGGGTGTACTTCTTGGCA+TGG - chr4_1:51566643-51566662 None:intergenic 50.0%
ACCCCAACCACCAGAGTTTA+AGG + chr4_1:51566656-51566675 Msa0554300:CDS 50.0%
!! AGCTTTTCACTGTTGGTGGG+CGG - chr4_1:51566993-51567012 None:intergenic 50.0%
TCCATTCCATCTGCACACTG+AGG + chr4_1:51567498-51567517 Msa0554300:CDS 50.0%
ACCTCAGTGTGCAGATGGAA+TGG - chr4_1:51567502-51567521 None:intergenic 50.0%
AACGAACCTCAGTGTGCAGA+TGG - chr4_1:51567507-51567526 None:intergenic 50.0%
GGAAGCAACAAGGGTTCCAA+AGG + chr4_1:51567677-51567696 Msa0554300:CDS 50.0%
!! TAGGGGTATGGGTTAGCCTT+TGG - chr4_1:51567696-51567715 None:intergenic 50.0%
! AGTCGGTGGTATAGGGGTAT+GGG - chr4_1:51567707-51567726 None:intergenic 50.0%
TAGTCGGTGGTATAGGGGTA+TGG - chr4_1:51567708-51567727 None:intergenic 50.0%
ACGGGATAGTCGGTGGTATA+GGG - chr4_1:51567714-51567733 None:intergenic 50.0%
!! GTTTGGGTTCTGGCTTTGGT+GGG - chr4_1:51567818-51567837 None:intergenic 50.0%
!! TGTTTGGGTTCTGGCTTTGG+TGG - chr4_1:51567819-51567838 None:intergenic 50.0%
CTCTCCAATTGAAAGGGCTC+TGG - chr4_1:51567852-51567871 None:intergenic 50.0%
GGAGAGTCTAGTGAGACATG+AGG + chr4_1:51567866-51567885 Msa0554300:CDS 50.0%
!! CCTTCTCTGGAACTGGGATT+GGG - chr4_1:51568129-51568148 None:intergenic 50.0%
!! ACCTTCTCTGGAACTGGGAT+TGG - chr4_1:51568130-51568149 None:intergenic 50.0%
! TTTTCTTCGGCCTCGCAGCA+TGG - chr4_1:51565403-51565422 None:intergenic 55.0%
GTCAGCAGCCACAAAGAGCA+CGG + chr4_1:51565738-51565757 Msa0554300:CDS 55.0%
TAGTACGAGAGACCTGCCAC+TGG + chr4_1:51566211-51566230 Msa0554300:CDS 55.0%
!! AAAGAGTGTTGGCCAGTGGC+AGG - chr4_1:51566226-51566245 None:intergenic 55.0%
!! TGGGAAAGAGTGTTGGCCAG+TGG - chr4_1:51566230-51566249 None:intergenic 55.0%
CAGCGCTCTTCACTCTAGCA+GGG - chr4_1:51566419-51566438 None:intergenic 55.0%
ACTTCTTGGCATGGGAGGCA+AGG - chr4_1:51566634-51566653 None:intergenic 55.0%
GGTGTACTTCTTGGCATGGG+AGG - chr4_1:51566639-51566658 None:intergenic 55.0%
GGTGGTTGGGGTGTACTTCT+TGG - chr4_1:51566648-51566667 None:intergenic 55.0%
!! GCTTTTCACTGTTGGTGGGC+GGG - chr4_1:51566992-51567011 None:intergenic 55.0%
AAATCAGCCACTGCGGTAGG+AGG - chr4_1:51567268-51567287 None:intergenic 55.0%
CGGGATAGTCGGTGGTATAG+GGG - chr4_1:51567713-51567732 None:intergenic 55.0%
CACGGGATAGTCGGTGGTAT+AGG - chr4_1:51567715-51567734 None:intergenic 55.0%
! CTATACCACCGACTATCCCG+TGG + chr4_1:51567713-51567732 Msa0554300:CDS 55.0%
TTGTACCACGGGATAGTCGG+TGG - chr4_1:51567721-51567740 None:intergenic 55.0%
CCCAATCCCAGTTCCAGAGA+AGG + chr4_1:51568126-51568145 Msa0554300:CDS 55.0%
!! TGCGGACCTTCTCTGGAACT+GGG - chr4_1:51568135-51568154 None:intergenic 55.0%
!! TTGCGGACCTTCTCTGGAAC+TGG - chr4_1:51568136-51568155 None:intergenic 55.0%
AGTAGCAGGGCTCGAAGTTG+TGG - chr4_1:51568750-51568769 None:intergenic 55.0%
TGAATCCTTGGCACCTCCCT+AGG + chr4_1:51568826-51568845 Msa0554300:three_prime_UTR 55.0%
AGAGGATGCACCATGCTGCG+AGG + chr4_1:51565390-51565409 Msa0554300:CDS 60.0%
! CAGCCACAAAGAGCACGGCA+GGG + chr4_1:51565743-51565762 Msa0554300:CDS 60.0%
AGTCCCTGCCGTGCTCTTTG+TGG - chr4_1:51565749-51565768 None:intergenic 60.0%
GCAGCGCTCTTCACTCTAGC+AGG - chr4_1:51566420-51566439 None:intergenic 60.0%
!! GAAGAGCGCTGCTGAGCATG+AGG + chr4_1:51566428-51566447 Msa0554300:CDS 60.0%
GGCGGGCCCTTAGTGATGTT+TGG - chr4_1:51566975-51566994 None:intergenic 60.0%
GTTTCCACCTCCTACCGCAG+TGG + chr4_1:51567258-51567277 Msa0554300:CDS 60.0%
ACTGGGATTGGGTCCCTGCA+AGG - chr4_1:51568118-51568137 None:intergenic 60.0%
AGGGGTTTGCGGACCTTCTC+TGG - chr4_1:51568142-51568161 None:intergenic 60.0%
!! AGACACCTAGGGAGGTGCCA+AGG - chr4_1:51568834-51568853 None:intergenic 60.0%
ATGGCGGTGGAGGAGGGAAC+CGG + chr4_1:51564076-51564095 Msa0554300:CDS 65.0%
GATCGTTGTGCCACCACCGC+CGG - chr4_1:51564098-51564117 None:intergenic 65.0%
! GCAGCCACAAAGAGCACGGC+AGG + chr4_1:51565742-51565761 Msa0554300:CDS 65.0%
TCAGCCACTGCGGTAGGAGG+TGG - chr4_1:51567265-51567284 None:intergenic 65.0%
GCGGTGGAGGAGGGAACCGG+CGG + chr4_1:51564079-51564098 Msa0554300:CDS 75.0%
GTGGAGGAGGGAACCGGCGG+TGG + chr4_1:51564082-51564101 Msa0554300:CDS 75.0%
GAGGAGGGAACCGGCGGTGG+TGG + chr4_1:51564085-51564104 Msa0554300:CDS 75.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 51563918 51569074 51563918 ID=Msa0554300;Name=Msa0554300
chr4_1 mRNA 51563918 51569074 51563918 ID=Msa0554300-mRNA-1;Parent=Msa0554300;Name=Msa0554300-mRNA-1;_AED=0.15;_eAED=0.15;_QI=158|1|1|1|1|1|18|293|753
chr4_1 exon 51563918 51564238 51563918 ID=Msa0554300-mRNA-1:exon:14783;Parent=Msa0554300-mRNA-1
chr4_1 exon 51565098 51565288 51565098 ID=Msa0554300-mRNA-1:exon:14784;Parent=Msa0554300-mRNA-1
chr4_1 exon 51565373 51565453 51565373 ID=Msa0554300-mRNA-1:exon:14785;Parent=Msa0554300-mRNA-1
chr4_1 exon 51565535 51565834 51565535 ID=Msa0554300-mRNA-1:exon:14786;Parent=Msa0554300-mRNA-1
chr4_1 exon 51565927 51566019 51565927 ID=Msa0554300-mRNA-1:exon:14787;Parent=Msa0554300-mRNA-1
chr4_1 exon 51566134 51566250 51566134 ID=Msa0554300-mRNA-1:exon:14788;Parent=Msa0554300-mRNA-1
chr4_1 exon 51566351 51566503 51566351 ID=Msa0554300-mRNA-1:exon:14789;Parent=Msa0554300-mRNA-1
chr4_1 exon 51566615 51566677 51566615 ID=Msa0554300-mRNA-1:exon:14790;Parent=Msa0554300-mRNA-1
chr4_1 exon 51566761 51566841 51566761 ID=Msa0554300-mRNA-1:exon:14791;Parent=Msa0554300-mRNA-1
chr4_1 exon 51566925 51567080 51566925 ID=Msa0554300-mRNA-1:exon:14792;Parent=Msa0554300-mRNA-1
chr4_1 exon 51567166 51567297 51567166 ID=Msa0554300-mRNA-1:exon:14793;Parent=Msa0554300-mRNA-1
chr4_1 exon 51567442 51567519 51567442 ID=Msa0554300-mRNA-1:exon:14794;Parent=Msa0554300-mRNA-1
chr4_1 exon 51567615 51567734 51567615 ID=Msa0554300-mRNA-1:exon:14795;Parent=Msa0554300-mRNA-1
chr4_1 exon 51567813 51567979 51567813 ID=Msa0554300-mRNA-1:exon:14796;Parent=Msa0554300-mRNA-1
chr4_1 exon 51568123 51568231 51568123 ID=Msa0554300-mRNA-1:exon:14797;Parent=Msa0554300-mRNA-1
chr4_1 exon 51568340 51568399 51568340 ID=Msa0554300-mRNA-1:exon:14798;Parent=Msa0554300-mRNA-1
chr4_1 exon 51568494 51568588 51568494 ID=Msa0554300-mRNA-1:exon:14799;Parent=Msa0554300-mRNA-1
chr4_1 exon 51568679 51569074 51568679 ID=Msa0554300-mRNA-1:exon:14800;Parent=Msa0554300-mRNA-1
chr4_1 five_prime_UTR 51563918 51564075 51563918 ID=Msa0554300-mRNA-1:five_prime_utr;Parent=Msa0554300-mRNA-1
chr4_1 CDS 51564076 51564238 51564076 ID=Msa0554300-mRNA-1:cds;Parent=Msa0554300-mRNA-1
chr4_1 CDS 51565098 51565288 51565098 ID=Msa0554300-mRNA-1:cds;Parent=Msa0554300-mRNA-1
chr4_1 CDS 51565373 51565453 51565373 ID=Msa0554300-mRNA-1:cds;Parent=Msa0554300-mRNA-1
chr4_1 CDS 51565535 51565834 51565535 ID=Msa0554300-mRNA-1:cds;Parent=Msa0554300-mRNA-1
chr4_1 CDS 51565927 51566019 51565927 ID=Msa0554300-mRNA-1:cds;Parent=Msa0554300-mRNA-1
chr4_1 CDS 51566134 51566250 51566134 ID=Msa0554300-mRNA-1:cds;Parent=Msa0554300-mRNA-1
chr4_1 CDS 51566351 51566503 51566351 ID=Msa0554300-mRNA-1:cds;Parent=Msa0554300-mRNA-1
chr4_1 CDS 51566615 51566677 51566615 ID=Msa0554300-mRNA-1:cds;Parent=Msa0554300-mRNA-1
chr4_1 CDS 51566761 51566841 51566761 ID=Msa0554300-mRNA-1:cds;Parent=Msa0554300-mRNA-1
chr4_1 CDS 51566925 51567080 51566925 ID=Msa0554300-mRNA-1:cds;Parent=Msa0554300-mRNA-1
chr4_1 CDS 51567166 51567297 51567166 ID=Msa0554300-mRNA-1:cds;Parent=Msa0554300-mRNA-1
chr4_1 CDS 51567442 51567519 51567442 ID=Msa0554300-mRNA-1:cds;Parent=Msa0554300-mRNA-1
chr4_1 CDS 51567615 51567734 51567615 ID=Msa0554300-mRNA-1:cds;Parent=Msa0554300-mRNA-1
chr4_1 CDS 51567813 51567979 51567813 ID=Msa0554300-mRNA-1:cds;Parent=Msa0554300-mRNA-1
chr4_1 CDS 51568123 51568231 51568123 ID=Msa0554300-mRNA-1:cds;Parent=Msa0554300-mRNA-1
chr4_1 CDS 51568340 51568399 51568340 ID=Msa0554300-mRNA-1:cds;Parent=Msa0554300-mRNA-1
chr4_1 CDS 51568494 51568588 51568494 ID=Msa0554300-mRNA-1:cds;Parent=Msa0554300-mRNA-1
chr4_1 CDS 51568679 51568781 51568679 ID=Msa0554300-mRNA-1:cds;Parent=Msa0554300-mRNA-1
chr4_1 three_prime_UTR 51568782 51569074 51568782 ID=Msa0554300-mRNA-1:three_prime_utr;Parent=Msa0554300-mRNA-1
Gene Sequence

>Msa0554300

ATGGCGGTGGAGGAGGGAACCGGCGGTGGTGGCACAACGATCATCGACGAGATTTACGAATTCTGTGCACCGAGATTCTTCGATTTCTTGAAAGTGGAATCCGATGACGATGTTCGTAGGGCTGAACTTTGGTTTCACACCGCTTTATCTTATGCTCCTTCTCCATTCATGCCTAAAATCAAGGCTGGTAGATCCATTACTGTAGACACATTATGTGATTTTAGTGAAGCTGACAATATGCCAAAGGCTGAAGATAGAGTTCTGGAATCAAATACTCAACCACAGAGCATTATTAGCAAAGTAAAGGAAGATGATAGAGCCGAGGAAGAAAACCTTACAATTGCTTCTCACATGAATTCTACCATTAAGAAAGAGGATGCACCATGCTGCGAGGCCGAAGAAAATAATTCAACTTCTCTTGAGGTATTAAGCGTGGATGCTGTTGGTAAGAAAATGAGTAATCATAAAGCGGAGATCATAAACACAGCGACATCCATAGGAGGAGCATCTGTTGAAGTAGGAAAAGATGCTTGCACACCAAAACCAGCATTGCGAAAAAATGTCAATGCAGCTTCCACTAATTCTAAGAAGCAGCAGAACTCTAAGAAGGTATCCACAAATACCAAAACTCGATTACAGTCAGCAGCCACAAAGAGCACGGCAGGGACTCCCCACTTCACCCAAGAGAATCAAGCCATTAAAAGGCAAAAATTAGAAGGAGGGAAAACTAGACAGATTCTGAATCTCAAACCTCAAACTTTGCCTCATGATAAGTCAAAACTGGGTTACTCTTCAAGTACTAGCAAAACTCAGAATGAGGACAGAAAGGTTTATGTTCGTGACACACCAAAAACACCAGCAGCACCATTTAAATCAATGGCAGAAATGATGAAGAAATTTGAGTCTAGTACGAGAGACCTGCCACTGGCCAACACTCTTTCCCATACAAAACCGAAACTAACATTGACCAGGCCTAAGTCACCTGAATTTGAGACAAATCAGCGGGTTCGCCCTGCTAGAGTGAAGAGCGCTGCTGAGCATGAGGAAGAAATGATGGCTAAAATGCCAAAATTCAAGGCTCGAACACTAAATAAGAAGATTTTGCAAACTTCAACCTTGCCTCCCATGCCAAGAAGTACACCCCAACCACCAGAGTTTAAGGAATTTCATCTAGAAACATTGGCTAGGGCTCATCAAAATACAGATTCAGCTTCAAAAGCCTCATCAGAGGTGTCTCATAAGGAGAACTCATCGAAACCTCATCTCACTGAACCTAAACCTCCACTACTCCAAACATCACTAAGGGCCCGCCCACCAACAGTGAAAAGCTCATTAGAAATTGAGCAAGAGGAACTTGAAAAGATTCCTAAATTCAAGGCAAGACCCCTAAATAAAAAGATCTTTGAAAGTAAAGGGGATATTGGAATATTCTGCCATATGAAGAAACATGTTACCGAACCTCAAGAATTTCACTTTGCAACAAGTGAGAGGTTTCCACCTCCTACCGCAGTGGCTGATTTATTTGACAAGCTTTCTTTGAAGTCTGAACCTGCACGTAATACAATTCCAAGAACCACTACTCCAAATCCATTCCATCTGCACACTGAGGAAAGAGGAGCTGAGAAAGAGAAGAAACTGTACATGGAACTTTTTCAGAAAGAATTGGAAGAGGAAGCAACAAGGGTTCCAAAGGCTAACCCATACCCCTATACCACCGACTATCCCGTGATCCCACCAAAGCCAGAACCCAAACAATGCACAAAACCAGAGCCCTTTCAATTGGAGAGTCTAGTGAGACATGAGGAAGAAATGCAAAGGGAACAAGAAGAAAGACTTAGAATGGAAAGAGAAGAAGCACAGATGAGAAAATTTAAGGCGCAACCAGTATTAAAAGAGGACCCAATCCCAGTTCCAGAGAAGGTCCGCAAACCCCTTACACAAGTTCAAGAGTTTGATTTACATTTGAATCATCGAGCCGTGGATAGAGCACAATTTGATCAGAAGATTAAGGAGAAAGAAATGGTATACAAACGATACAGAGAGGAAAGTGAAGCAGCAAGAATGATAGAGGAAGAGAAGGCACTGAAACAGATGAGAAGGACAATGGTCCCTCATGCTAGACCAGTTCCAAACTTTAATAATCCTTTTTGCCCACAAAAGACTTCTAAAACAACAAAACCCAAGTCACCAAACTTGCGTGTACTCCAAAGAAGACGGTTCAATGGTTCCACAACTTCGAGCCCTGCTACTAGCATGAGATGA
Protein sequence

>Msa0554300

MAVEEGTGGGGTTIIDEIYEFCAPRFFDFLKVESDDDVRRAELWFHTALSYAPSPFMPKIKAGRSITVDTLCDFSEADNMPKAEDRVLESNTQPQSIISKVKEDDRAEEENLTIASHMNSTIKKEDAPCCEAEENNSTSLEVLSVDAVGKKMSNHKAEIINTATSIGGASVEVGKDACTPKPALRKNVNAASTNSKKQQNSKKVSTNTKTRLQSAATKSTAGTPHFTQENQAIKRQKLEGGKTRQILNLKPQTLPHDKSKLGYSSSTSKTQNEDRKVYVRDTPKTPAAPFKSMAEMMKKFESSTRDLPLANTLSHTKPKLTLTRPKSPEFETNQRVRPARVKSAAEHEEEMMAKMPKFKARTLNKKILQTSTLPPMPRSTPQPPEFKEFHLETLARAHQNTDSASKASSEVSHKENSSKPHLTEPKPPLLQTSLRARPPTVKSSLEIEQEELEKIPKFKARPLNKKIFESKGDIGIFCHMKKHVTEPQEFHFATSERFPPPTAVADLFDKLSLKSEPARNTIPRTTTPNPFHLHTEERGAEKEKKLYMELFQKELEEEATRVPKANPYPYTTDYPVIPPKPEPKQCTKPEPFQLESLVRHEEEMQREQEERLRMEREEAQMRKFKAQPVLKEDPIPVPEKVRKPLTQVQEFDLHLNHRAVDRAQFDQKIKEKEMVYKRYREESEAARMIEEEKALKQMRRTMVPHARPVPNFNNPFCPQKTSKTTKPKSPNLRVLQRRRFNGSTTSSPATSMR*