AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1129150

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1129150 MtrunA17_Chr7g0273781 88.542 288 14 3 1 270 34 320 0.0 518
Msa1129150 MtrunA17_Chr7g0273791 85.069 288 24 3 1 270 1 287 3.67e-179 501
Msa1129150 MtrunA17_Chr7g0273731 76.389 288 49 3 1 270 84 370 6.14e-159 452
Msa1129150 MtrunA17_Chr5g0433641 77.163 289 46 4 1 270 1 288 1.15e-157 446
Msa1129150 MtrunA17_Chr7g0273761 75.000 288 51 5 3 270 375 661 3.75e-150 440
Msa1129150 MtrunA17_Chr7g0273761 73.427 143 36 2 129 270 32 173 1.92e-68 226
Msa1129150 MtrunA17_Chr7g0273721 72.474 287 59 4 3 270 4 289 1.29e-148 423
Msa1129150 MtrunA17_Chr1g0165671 55.822 292 101 6 1 270 18 303 2.61e-109 324
Msa1129150 MtrunA17_Chr1g0165711 54.355 287 111 3 2 270 1 285 4.94e-107 316
Msa1129150 MtrunA17_Chr1g0165661 53.125 288 114 4 2 270 1 286 1.22e-104 311
Msa1129150 MtrunA17_Chr1g0165681 52.778 288 115 4 2 270 1 286 2.66e-102 305
Msa1129150 MtrunA17_Chr1g0191081 53.125 288 113 6 3 270 11 296 3.08e-94 285
Msa1129150 MtrunA17_Chr7g0273741 81.818 132 22 1 1 130 1 132 9.52e-74 222
Msa1129150 MtrunA17_Chr3g0098961 75.385 130 30 1 3 130 6 135 3.48e-65 201
Msa1129150 MtrunA17_Chr6g0471371 64.122 131 45 1 2 130 1 131 2.27e-57 181
Msa1129150 MtrunA17_Chr1g0165741 64.122 131 45 1 2 130 1 131 1.57e-55 176
Msa1129150 MtrunA17_Chr8g0353421 62.500 128 46 1 2 127 1 128 7.62e-55 173
Msa1129150 MtrunA17_Chr7g0273691 75.510 98 22 2 148 244 1 97 1.42e-46 151
Msa1129150 MtrunA17_Chr7g0224391 33.214 280 158 7 14 270 20 293 9.10e-44 154
Msa1129150 MtrunA17_Chr3g0132001 32.639 288 172 5 2 270 6 290 2.63e-43 152
Msa1129150 MtrunA17_Chr8g0386141 30.986 284 171 7 8 270 5 284 6.96e-43 151
Msa1129150 MtrunA17_Chr7g0270771 29.412 289 157 7 6 270 1 266 1.17e-39 139
Msa1129150 MtrunA17_Chr4g0027071 31.206 282 151 9 17 264 19 291 2.64e-35 131
Msa1129150 MtrunA17_Chr3g0141851 31.387 274 159 7 13 262 14 282 4.02e-35 131
Msa1129150 MtrunA17_Chr6g0471971 48.855 131 54 5 145 270 2 124 2.21e-30 113
Msa1129150 MtrunA17_Chr1g0165731 45.045 111 58 2 145 254 2 110 8.99e-29 105
Msa1129150 MtrunA17_Chr2g0306321 30.851 282 165 9 18 269 26 307 1.19e-28 113
Msa1129150 MtrunA17_Chr2g0334001 28.413 271 174 6 17 269 10 278 1.00e-27 110
Msa1129150 MtrunA17_Chr4g0001861 29.389 262 137 8 41 269 33 279 1.64e-26 107
Msa1129150 MtrunA17_Chr3g0106691 29.749 279 167 8 17 269 63 338 2.93e-26 107
Msa1129150 MtrunA17_Chr3g0106711 33.511 188 101 4 17 180 17 204 5.15e-25 99.8
Msa1129150 MtrunA17_Chr8g0371821 30.469 256 150 11 36 269 28 277 8.22e-25 102
Msa1129150 MtrunA17_Chr4g0004691 32.121 165 90 4 20 167 14 173 1.68e-22 91.7
Msa1129150 MtrunA17_Chr6g0470591 29.310 232 127 9 62 264 70 293 3.60e-22 95.1
Msa1129150 MtrunA17_Chr7g0273671 93.023 43 3 0 1 43 1 43 1.95e-21 84.7
Msa1129150 MtrunA17_Chr3g0106661 28.522 291 150 10 17 264 17 292 4.13e-21 92.4
Msa1129150 MtrunA17_Chr7g0273681 95.122 41 2 0 90 130 1 41 4.93e-21 84.0
Msa1129150 MtrunA17_Chr2g0283361 29.741 232 131 9 62 268 57 281 6.15e-21 91.7
Msa1129150 MtrunA17_Chr5g0442721 30.374 214 120 7 42 233 49 255 6.32e-21 91.7
Msa1129150 MtrunA17_Chr3g0106721 28.521 284 157 10 17 264 17 290 1.72e-20 90.5
Msa1129150 MtrunA17_Chr5g0442691 28.175 252 148 8 8 233 31 275 8.06e-19 85.9
Msa1129150 MtrunA17_Chr3g0087401 26.335 281 170 9 18 266 10 285 1.43e-18 84.7
Msa1129150 MtrunA17_Chr7g0253501 26.117 291 166 12 16 266 8 289 1.98e-18 84.3
Msa1129150 MtrunA17_Chr6g0471381 46.316 95 42 3 180 270 6 95 5.65e-18 81.3
Msa1129150 MtrunA17_Chr5g0442701 28.968 252 146 9 8 233 8 252 1.35e-17 82.0
Msa1129150 MtrunA17_Chr7g0252731 27.650 217 130 7 63 255 70 283 1.76e-17 81.6
Msa1129150 MtrunA17_Chr7g0235531 25.517 290 174 10 17 270 11 294 2.18e-17 81.3
Msa1129150 MtrunA17_Chr3g0106761 28.889 225 128 9 68 267 19 236 2.64e-17 80.9
Msa1129150 MtrunA17_Chr7g0253541 26.638 229 129 9 62 258 59 280 1.99e-16 78.6
Msa1129150 MtrunA17_Chr3g0095721 30.601 183 115 2 63 233 72 254 2.42e-16 78.6
Msa1129150 MtrunA17_Chr3g0106741 29.545 220 115 7 77 267 59 267 4.20e-16 77.4
Msa1129150 MtrunA17_Chr7g0253531 29.101 189 107 8 16 182 8 191 7.53e-16 77.0
Msa1129150 MtrunA17_Chr4g0072041 24.138 261 168 8 36 269 39 296 1.55e-15 75.9
Msa1129150 MtrunA17_Chr3g0095731 29.469 207 125 5 42 233 50 250 8.07e-15 73.9
Msa1129150 MtrunA17_Chr5g0438701 25.207 242 143 10 16 234 9 235 8.21e-15 73.9
Msa1129150 MtrunA17_Chr4g0054081 30.994 171 94 5 18 167 17 184 3.98e-14 71.6
Msa1129150 MtrunA17_Chr3g0123061 26.768 198 115 10 10 189 5 190 4.92e-14 71.2
Msa1129150 MtrunA17_Chr8g0354371 23.675 283 176 9 13 270 20 287 5.49e-13 68.6
Msa1129150 MtrunA17_Chr5g0438681 26.141 241 138 10 16 234 9 231 2.65e-12 66.2
Msa1129150 MtrunA17_Chr8g0376891 28.313 166 95 6 16 162 9 169 3.21e-12 66.2
Msa1129150 MtrunA17_Chr5g0408911 26.357 258 143 12 23 252 33 271 5.09e-12 65.5
Msa1129150 MtrunA17_Chr3g0134091 26.022 269 158 11 24 262 30 287 1.29e-11 64.3
Msa1129150 MtrunA17_Chr1g0169471 33.663 101 55 4 79 167 2 102 2.95e-11 59.3
Msa1129150 MtrunA17_Chr2g0278481 25.322 233 135 9 17 231 24 235 8.00e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1129150 AT5G17540.1 48.966 290 125 6 2 270 1 288 8.56e-84 258
Msa1129150 AT3G03480.1 49.481 289 118 8 3 269 12 294 9.86e-77 240
Msa1129150 AT3G48720.1 31.379 290 175 7 1 270 1 286 6.97e-43 151
Msa1129150 AT5G41040.2 31.379 290 174 5 3 270 10 296 9.17e-42 149
Msa1129150 AT5G41040.1 31.379 290 174 5 3 270 26 312 1.09e-41 149
Msa1129150 AT5G63560.1 31.142 289 172 6 2 270 1 282 2.07e-39 142
Msa1129150 AT1G27620.1 32.862 283 154 8 14 270 13 285 1.18e-35 132
Msa1129150 AT3G62160.1 29.433 282 173 8 6 270 1 273 4.88e-29 114
Msa1129150 AT2G25150.1 29.537 281 155 10 16 264 19 288 1.79e-28 113
Msa1129150 AT5G48930.1 30.435 276 163 9 17 269 10 279 1.13e-27 110
Msa1129150 AT5G57840.1 31.159 276 154 9 10 258 3 269 7.79e-27 108
Msa1129150 AT2G23510.1 27.431 288 178 8 2 264 5 286 1.90e-24 102
Msa1129150 AT3G47170.1 25.083 303 173 9 8 264 10 304 1.81e-23 99.4
Msa1129150 AT5G07080.1 28.231 294 172 10 2 264 6 291 3.85e-23 98.2
Msa1129150 AT1G03390.1 30.928 291 153 13 17 269 24 304 5.53e-22 95.1
Msa1129150 AT1G31490.1 30.364 247 132 11 31 252 29 260 1.22e-21 94.0
Msa1129150 AT1G65450.1 27.444 266 160 10 30 269 39 297 2.64e-20 90.1
Msa1129150 AT2G40230.1 26.573 286 169 10 17 270 12 288 5.03e-20 89.4
Msa1129150 AT1G28680.2 27.715 267 159 10 31 270 27 286 6.08e-20 89.0
Msa1129150 AT1G28680.1 27.715 267 159 10 31 270 27 286 1.20e-19 88.2
Msa1129150 AT2G19070.1 32.164 171 93 5 36 187 29 195 1.96e-18 84.7
Msa1129150 AT1G32910.1 28.500 200 129 3 46 233 48 245 1.15e-16 79.7
Msa1129150 AT5G16410.1 27.442 215 136 7 63 263 91 299 7.26e-16 77.4
Msa1129150 AT4G31910.1 26.259 278 160 11 31 267 32 305 8.87e-16 77.0
Msa1129150 AT1G78990.1 29.670 182 115 3 63 233 67 246 1.52e-15 76.3
Msa1129150 AT4G15390.1 24.000 275 167 8 5 254 3 260 2.93e-14 72.4
Msa1129150 AT4G15390.2 24.000 275 167 8 5 254 3 260 2.93e-14 72.4
Msa1129150 AT5G42830.1 26.990 289 163 11 14 267 16 291 8.74e-14 71.2
Msa1129150 AT1G24420.2 29.779 272 150 10 16 263 11 265 3.21e-13 69.3
Msa1129150 AT1G24420.1 29.779 272 150 10 16 263 11 265 3.21e-13 69.3
Msa1129150 AT5G47950.1 27.011 174 106 3 10 167 6 174 2.84e-12 66.6

Find 136 sgRNAs with CRISPR-Local

Find 239 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTCTTCCTTAATGGTATT+TGG 0.143670 7_3:+81099872 None:intergenic
ATCCATTTGCGGGAAGAATT+AGG 0.192366 7_3:-81102518 Msa1129150:CDS
TTGATCAATTAAATATAAAA+AGG 0.227832 7_3:+81098802 None:intergenic
CACTCGGTGTAAGATGATTT+TGG 0.236072 7_3:+81099204 None:intergenic
CTATGATTCTTGTTATAATT+AGG 0.239477 7_3:+81098771 None:intergenic
GCTAAATAAAACAAAGAATA+GGG 0.248191 7_3:+81099015 None:intergenic
AGCAGTATCTTCTTCCTTAA+TGG 0.250041 7_3:+81099865 None:intergenic
GCATTCTGTGGCCGATCTTA+TGG 0.264577 7_3:-81099492 Msa1129150:three_prime_UTR
AGCCCCTAACTTTATTTAAC+AGG 0.267572 7_3:+81099135 None:intergenic
GGCCGATCTTATGGTTATTA+AGG 0.274324 7_3:-81099483 Msa1129150:three_prime_UTR
GCTGCAGTGGTGACGCCAGC+TGG 0.286610 7_3:+81099593 None:intergenic
GATTCCTGTTAAATAAAGTT+AGG 0.306400 7_3:-81099139 Msa1129150:three_prime_UTR
CCATTCAACCTGTGTGGAAT+AGG 0.307886 7_3:-81099967 Msa1129150:CDS
TCTCCGTTTATATTCTTGTA+TGG 0.307915 7_3:+81099308 None:intergenic
TCCATTTGCGGGAAGAATTA+GGG 0.325568 7_3:-81102517 Msa1129150:CDS
CATTGTATGGTTCCAATTCA+TGG 0.325987 7_3:+81100060 None:intergenic
TCGCCACTTGTTGGATATTA+CGG 0.326351 7_3:-81099632 Msa1129150:three_prime_UTR
TCTTCAGAGGGCAAACAAAT+TGG 0.336728 7_3:+81099269 None:intergenic
CATAGCTGCTCTTCGTCTCT+TGG 0.341686 7_3:-81099804 Msa1129150:CDS
GGGTCTTTCTCTACCATTGA+TGG 0.356699 7_3:+81102588 None:intergenic
GTGAATTTCGGATGGGGTAA+AGG 0.370225 7_3:-81099392 Msa1129150:three_prime_UTR
ATTCTTGTATGGGACGATAT+AGG 0.378210 7_3:+81099319 None:intergenic
TGAATTTCGGATGGGGTAAA+GGG 0.380086 7_3:-81099391 Msa1129150:three_prime_UTR
CATGACTGCATGGGCAGAAA+TGG 0.383185 7_3:-81100011 Msa1129150:CDS
GGGAGGATTTGTTATATAGA+TGG 0.392741 7_3:+81098823 None:intergenic
AACTCCACTGCATAACCAAA+TGG 0.398172 7_3:+81099554 None:intergenic
TCACGACGGTACAAACTATA+AGG 0.401473 7_3:+81099160 None:intergenic
GGGTGATGGGCGCAAGTTGA+TGG 0.402242 7_3:-81102493 Msa1129150:CDS
TGATATATTGACTAGTATCT+AGG 0.405033 7_3:-81099063 Msa1129150:three_prime_UTR
TGGGGTAAAGGGGTGTATGG+TGG 0.406331 7_3:-81099380 Msa1129150:three_prime_UTR
GCAGCTGGTGGCACCAACTC+TGG 0.409555 7_3:+81102705 None:intergenic
GTTTATTACTATCCATTTGC+GGG 0.409976 7_3:-81102528 Msa1129150:CDS
AAGCTTTGTGGAAACCCATT+TGG 0.411357 7_3:-81099569 Msa1129150:three_prime_UTR
GGTTCATAGTGGCCATGAAT+TGG 0.412673 7_3:-81100072 Msa1129150:CDS
TCCCTAATTCTTCCCGCAAA+TGG 0.413944 7_3:+81102516 None:intergenic
AGGCTCTCAGAAGTGAATTT+CGG 0.414115 7_3:-81099404 Msa1129150:three_prime_UTR
CACAAAAGCATTGCAGTTAG+AGG 0.414539 7_3:-81099717 Msa1129150:CDS
ACCACTGCAGCGAAGCTTTG+TGG 0.415000 7_3:-81099581 Msa1129150:three_prime_UTR
CTCCGTTTATATTCTTGTAT+GGG 0.416384 7_3:+81099309 None:intergenic
ATTCCTGTTAAATAAAGTTA+GGG 0.423482 7_3:-81099138 Msa1129150:three_prime_UTR
GGCTAAATAAAACAAAGAAT+AGG 0.426921 7_3:+81099014 None:intergenic
AATATATCACAATAATAAAC+AGG 0.430409 7_3:+81099077 None:intergenic
GGTGTTTATTTACAACTGTA+AGG 0.432833 7_3:-81099457 Msa1129150:three_prime_UTR
CATTCAACCTGTGTGGAATA+GGG 0.435556 7_3:-81099966 Msa1129150:CDS
GTTAACAATTCGCCACTTGT+TGG 0.440896 7_3:-81099641 Msa1129150:three_prime_UTR
CCTATTCCACACAGGTTGAA+TGG 0.443311 7_3:+81099967 None:intergenic
GTCCCATACAAGAATATAAA+CGG 0.444263 7_3:-81099311 Msa1129150:three_prime_UTR
GAACATCGTATAGGAGTTGA+TGG 0.450535 7_3:+81102373 None:intergenic
GGAGTTGCAAAAGGTGGGGC+TGG 0.459644 7_3:-81099359 Msa1129150:three_prime_UTR
CAGCTGCATCACCCATTGTA+TGG 0.471746 7_3:+81100047 None:intergenic
GGATGGGGTAAAGGGGTGTA+TGG 0.476221 7_3:-81099383 Msa1129150:three_prime_UTR
GAAGAGGTTTGCAAAAGAGT+TGG 0.476327 7_3:-81099243 Msa1129150:three_prime_UTR
ATCTGTTAGAGAGGAGAGAA+GGG 0.480887 7_3:-81098867 Msa1129150:three_prime_UTR
GTGCATTGACGAAGGTGAAA+TGG 0.485395 7_3:+81099779 None:intergenic
TCACAAGGAGTGGGTGCAGC+TGG 0.491045 7_3:+81102690 None:intergenic
CTTTCTCTACCATTGATGGT+TGG 0.494685 7_3:+81102592 None:intergenic
ATTGTTCGTATAATTCAAGA+TGG 0.497921 7_3:+81099903 None:intergenic
TGTTTATTACTATCCATTTG+CGG 0.499605 7_3:-81102529 Msa1129150:CDS
GTGGAATAGGGAGATTCTAA+TGG 0.500842 7_3:-81099954 Msa1129150:CDS
CTATCGTCACCAACCATCAA+TGG 0.501354 7_3:-81102601 Msa1129150:CDS
CTGAGCCTGGAACATCGTAT+AGG 0.505911 7_3:+81102364 None:intergenic
TCTCAGATTTGACTCGTGCT+AGG 0.509741 7_3:-81099424 Msa1129150:three_prime_UTR
GTGTATGGTGGAGTTGCAAA+AGG 0.512005 7_3:-81099368 Msa1129150:three_prime_UTR
AATCTGTTAGAGAGGAGAGA+AGG 0.512649 7_3:-81098868 Msa1129150:three_prime_UTR
ACTCCACTGCATAACCAAAT+GGG 0.518855 7_3:+81099555 None:intergenic
TATGGTGGAGTTGCAAAAGG+TGG 0.519898 7_3:-81099365 Msa1129150:three_prime_UTR
ATTTGGTTATGCAGTGGAGT+TGG 0.521840 7_3:-81099552 Msa1129150:three_prime_UTR
CTGGTGGCACCAACTCTGGT+TGG 0.521971 7_3:+81102709 None:intergenic
GATGTAACACTTGATCAGTT+TGG 0.522332 7_3:-81102426 Msa1129150:CDS
TCCACAAAGCTTCGCTGCAG+TGG 0.527787 7_3:+81099580 None:intergenic
TAGTTTAACTTCACAAGGAG+TGG 0.532006 7_3:+81102680 None:intergenic
GGAAGAATTAGGGAGGGTGA+TGG 0.533251 7_3:-81102507 Msa1129150:CDS
AAGGTAGACATCACAAAACT+AGG 0.537832 7_3:+81099179 None:intergenic
GAAGAATTAGGGAGGGTGAT+GGG 0.538143 7_3:-81102506 Msa1129150:CDS
AATGAACATGACACCTTCAC+CGG 0.539549 7_3:+81102461 None:intergenic
CATACAATGGGTGATGCAGC+TGG 0.540298 7_3:-81100046 Msa1129150:CDS
CTCTAAAGAAGAAAGATCGA+TGG 0.544782 7_3:+81099834 None:intergenic
AACAGATGCAAAGCAGCCTA+AGG 0.546355 7_3:+81098993 None:intergenic
TTCCTTAATAACCATAAGAT+CGG 0.546586 7_3:+81099481 None:intergenic
ATCTTATGGTTATTAAGGAA+CGG 0.549803 7_3:-81099478 Msa1129150:three_prime_UTR
ATGAATTGGAACCATACAAT+GGG 0.552002 7_3:-81100058 Msa1129150:CDS
GCGGAGGTGCCAACCAGAGT+TGG 0.552570 7_3:-81102718 Msa1129150:CDS
CTGCAGTGGTGACGCCAGCT+GGG 0.554568 7_3:+81099594 None:intergenic
TGCTATGTAATGATAATGAA+AGG 0.554856 7_3:-81099100 Msa1129150:three_prime_UTR
ATGGTGGAGTTGCAAAAGGT+GGG 0.555845 7_3:-81099364 Msa1129150:three_prime_UTR
AGTTTAACTTCACAAGGAGT+GGG 0.556068 7_3:+81102681 None:intergenic
GAATTTCGGATGGGGTAAAG+GGG 0.562673 7_3:-81099390 Msa1129150:three_prime_UTR
GCAGTTAGAGGCAGATGAAG+AGG 0.562947 7_3:-81099705 Msa1129150:CDS
TGCCCTCTGAAGATATGAAG+AGG 0.566120 7_3:-81099259 Msa1129150:three_prime_UTR
TGAGACAATTCATGACTGCA+TGG 0.568023 7_3:-81100021 Msa1129150:CDS
CTCAGAAGTGAATTTCGGAT+GGG 0.571165 7_3:-81099399 Msa1129150:three_prime_UTR
CAAGGAGTGGGTGCAGCTGG+TGG 0.572177 7_3:+81102693 None:intergenic
GAGACAATTCATGACTGCAT+GGG 0.576060 7_3:-81100020 Msa1129150:CDS
TCTCAGAAGTGAATTTCGGA+TGG 0.578397 7_3:-81099400 Msa1129150:three_prime_UTR
GTCACACGTCTCAAGTGTGG+TGG 0.581788 7_3:-81100094 Msa1129150:CDS
ATAGGAGTTGATGGAAGCAA+TGG 0.584604 7_3:+81102382 None:intergenic
TATATTCAAATCTGTTAGAG+AGG 0.584851 7_3:-81098876 Msa1129150:three_prime_UTR
AAACCTCTTCATATCTTCAG+AGG 0.585787 7_3:+81099256 None:intergenic
AGTTGATGGAAGCAATGGAA+TGG 0.589862 7_3:+81102387 None:intergenic
TGATGGAAGCAATGGAATGG+AGG 0.590351 7_3:+81102390 None:intergenic
TTCCACACAGGTTGAATGGA+AGG 0.590931 7_3:+81099971 None:intergenic
ATGGTGGATTGTACCGGTGA+AGG 0.594235 7_3:-81102474 Msa1129150:CDS
GGGACGATATAGGTTACTCC+AGG 0.594353 7_3:+81099329 None:intergenic
TTGTTATATAGATGGCTCAA+AGG 0.596690 7_3:+81098831 None:intergenic
CTAAATAAAACAAAGAATAG+GGG 0.602522 7_3:+81099016 None:intergenic
ATCACAAAACTAGGAGCACT+CGG 0.604510 7_3:+81099188 None:intergenic
AACCTCTTCATATCTTCAGA+GGG 0.608993 7_3:+81099257 None:intergenic
AAACCCATTTGGTTATGCAG+TGG 0.611003 7_3:-81099558 Msa1129150:three_prime_UTR
TGATGGGCGCAAGTTGATGG+TGG 0.614524 7_3:-81102490 Msa1129150:CDS
TGACGATAGATAAATATGAC+AGG 0.615201 7_3:+81102615 None:intergenic
CAAGTGTGGTGGGTTCATAG+TGG 0.622481 7_3:-81100083 Msa1129150:CDS
TTCCTGTTAAATAAAGTTAG+GGG 0.622693 7_3:-81099137 Msa1129150:three_prime_UTR
GATAATAGTTTAACTTCACA+AGG 0.623062 7_3:+81102675 None:intergenic
TCACACGTCTCAAGTGTGGT+GGG 0.628748 7_3:-81100093 Msa1129150:CDS
GGTTGCATGTAATGCGTGGA+GGG 0.631354 7_3:+81099924 None:intergenic
ATTAAAAGCTGAAGTTACAG+AGG 0.635766 7_3:-81099522 Msa1129150:three_prime_UTR
TTACCGTAATATCCAACAAG+TGG 0.636110 7_3:+81099629 None:intergenic
AAGTTGATGGTGGATTGTAC+CGG 0.636458 7_3:-81102480 Msa1129150:CDS
TCAGAAGTGAATTTCGGATG+GGG 0.636971 7_3:-81099398 Msa1129150:three_prime_UTR
CATGAATTGGAACCATACAA+TGG 0.637861 7_3:-81100059 Msa1129150:CDS
GTCCTTCCATTCAACCTGTG+TGG 0.637995 7_3:-81099973 Msa1129150:CDS
AAAGAGTTGGATGAGATGCT+TGG 0.638972 7_3:-81099230 Msa1129150:three_prime_UTR
AGAATCTCCCTATTCCACAC+AGG 0.648794 7_3:+81099959 None:intergenic
TCTGACATAGATGATCAAGA+AGG 0.650798 7_3:-81102654 Msa1129150:CDS
TGAAGCGATAAGATCGAATG+TGG 0.660160 7_3:+81099757 None:intergenic
CAGGTCACACGTCTCAAGTG+TGG 0.663378 7_3:-81100097 Msa1129150:CDS
AGAGGAATACATGCATTCTG+TGG 0.672300 7_3:-81099504 Msa1129150:three_prime_UTR
ATTTGCGGGAAGAATTAGGG+AGG 0.677321 7_3:-81102514 Msa1129150:CDS
TGGTGGAGTTGCAAAAGGTG+GGG 0.679716 7_3:-81099363 Msa1129150:three_prime_UTR
GCATGGGCAGAAATGGCTCG+AGG 0.681407 7_3:-81100004 Msa1129150:CDS
TTTGCGGGAAGAATTAGGGA+GGG 0.682068 7_3:-81102513 Msa1129150:CDS
AGATGGTTGCATGTAATGCG+TGG 0.696303 7_3:+81099920 None:intergenic
CGAATGTGGTGCATTGACGA+AGG 0.710870 7_3:+81099771 None:intergenic
TGGTTGCATGTAATGCGTGG+AGG 0.724762 7_3:+81099923 None:intergenic
TTATTTAACAGGAATCACGA+CGG 0.739768 7_3:+81099146 None:intergenic
CATCGTTAATGTTCACAGTG+CGG 0.743005 7_3:-81102737 Msa1129150:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAACTCTAAAAAAATATATA+TGG + chr7_3:81099501-81099520 None:intergenic 10.0%
!! CTATATATAAAGAAAATATA+TGG - chr7_3:81100778-81100797 Msa1129150:intron 10.0%
!!! TTATAAGAATAATGTTATTT+TGG - chr7_3:81100846-81100865 Msa1129150:intron 10.0%
!!! TTTGATTTTGATTAAATTAT+AGG + chr7_3:81100969-81100988 None:intergenic 10.0%
!! TATTATATTTATATTATGAC+AGG - chr7_3:81101395-81101414 Msa1129150:intron 10.0%
!! TGATCAATTAAATATAAAAA+GGG + chr7_3:81102711-81102730 None:intergenic 10.0%
!! TTGATCAATTAAATATAAAA+AGG + chr7_3:81102712-81102731 None:intergenic 10.0%
!! TTAAATATAGTCATATTTGT+AGG + chr7_3:81099389-81099408 None:intergenic 15.0%
!!! ATTAGCTAATTTTTAGATTT+TGG + chr7_3:81099661-81099680 None:intergenic 15.0%
!!! CTTTTCAAAACAATTTAATA+AGG + chr7_3:81100006-81100025 None:intergenic 15.0%
!!! CTTATTAAATTGTTTTGAAA+AGG - chr7_3:81100004-81100023 Msa1129150:CDS 15.0%
!!! TTGAAAAATATTTTTTGACA+AGG - chr7_3:81100091-81100110 Msa1129150:CDS 15.0%
!! ACATATATACTCAAAAAAAA+AGG - chr7_3:81100121-81100140 Msa1129150:intron 15.0%
!! TATTTCAAATACCATAAAAT+TGG + chr7_3:81100184-81100203 None:intergenic 15.0%
!! TGTAAATATAAAAACGTTAA+TGG + chr7_3:81100259-81100278 None:intergenic 15.0%
!! TCTTTATCTAATCAAATTAT+AGG - chr7_3:81100287-81100306 Msa1129150:intron 15.0%
!! AATCAAATTATAGGAAAAAA+CGG - chr7_3:81100296-81100315 Msa1129150:intron 15.0%
!!! TAAAAACCTCTTTTATAATT+AGG - chr7_3:81100485-81100504 Msa1129150:intron 15.0%
!!! AAAAACCTCTTTTATAATTA+GGG - chr7_3:81100486-81100505 Msa1129150:intron 15.0%
!!! TAAAGAAAATATATGGTTTT+TGG - chr7_3:81100785-81100804 Msa1129150:intron 15.0%
!!! AAATATAAGTATAGTTTGTT+AGG - chr7_3:81100917-81100936 Msa1129150:intron 15.0%
!!! GTCAATTTTTAAAAAAAGTA+AGG + chr7_3:81101074-81101093 None:intergenic 15.0%
!! TCAATCTGATTATAATATAT+TGG + chr7_3:81101189-81101208 None:intergenic 15.0%
!! AATATATCACAATAATAAAC+AGG + chr7_3:81102437-81102456 None:intergenic 15.0%
!! AATTAAGTCAATACAAAAAA+AGG + chr7_3:81102571-81102590 None:intergenic 15.0%
!! GAAAAAAATAGTAAAAATCG+AGG + chr7_3:81099479-81099498 None:intergenic 20.0%
!! TTCAATCATATAGATAACTT+TGG + chr7_3:81099558-81099577 None:intergenic 20.0%
!!! GTTTCTCTAAAAAAAAATGA+TGG + chr7_3:81099587-81099606 None:intergenic 20.0%
!! AAGATGTATTCAATACAATT+TGG - chr7_3:81099627-81099646 Msa1129150:three_prime_UTR 20.0%
!! CTAAAAATTAGCTAATAATG+AGG - chr7_3:81099665-81099684 Msa1129150:three_prime_UTR 20.0%
!!! CAAATTGATATCCAATTTTA+TGG - chr7_3:81100170-81100189 Msa1129150:intron 20.0%
!! ATCAAATTATAGGAAAAAAC+GGG - chr7_3:81100297-81100316 Msa1129150:intron 20.0%
!! CAAAATCACAATAAAAGATA+AGG + chr7_3:81100717-81100736 None:intergenic 20.0%
!! TCAAAGTTTAATAGCATAAT+TGG + chr7_3:81100826-81100845 None:intergenic 20.0%
!! ATTAACGCAATAAAAAAAAG+CGG - chr7_3:81101038-81101057 Msa1129150:intron 20.0%
!!! TTTAAAGCATGTGAAATATA+GGG + chr7_3:81101164-81101183 None:intergenic 20.0%
!!! ATTCATATGTTTTCTTCAAA+TGG + chr7_3:81101261-81101280 None:intergenic 20.0%
!! TTGTAAACTTGTAATCAATT+CGG + chr7_3:81101346-81101365 None:intergenic 20.0%
!! ATTCCTGTTAAATAAAGTTA+GGG - chr7_3:81102373-81102392 Msa1129150:intron 20.0%
!! CTAAATAAAACAAAGAATAG+GGG + chr7_3:81102498-81102517 None:intergenic 20.0%
!! GCTAAATAAAACAAAGAATA+GGG + chr7_3:81102499-81102518 None:intergenic 20.0%
!!! AAAAAAAGGTATAATCAACT+GGG + chr7_3:81102557-81102576 None:intergenic 20.0%
!! TCAATTAAATATAAAAAGGG+AGG + chr7_3:81102708-81102727 None:intergenic 20.0%
!!! CTATGATTCTTGTTATAATT+AGG + chr7_3:81102743-81102762 None:intergenic 20.0%
!! GATAATAGTTTAACTTCACA+AGG + chr7_3:81098839-81098858 None:intergenic 25.0%
! TGTTTATTACTATCCATTTG+CGG - chr7_3:81098982-81099001 Msa1129150:three_prime_UTR 25.0%
!!! GTCATTTTATGCTATTAACA+TGG + chr7_3:81099354-81099373 None:intergenic 25.0%
!!! CGAAGATTTTTTTATCACAT+GGG + chr7_3:81099818-81099837 None:intergenic 25.0%
! TCAATATGTACTTCACAAAT+TGG - chr7_3:81099912-81099931 Msa1129150:CDS 25.0%
! CAAACATTAACTTATTGATC+TGG - chr7_3:81100405-81100424 Msa1129150:intron 25.0%
! ATAAAAGATAAGGTTAGAGT+TGG + chr7_3:81100707-81100726 None:intergenic 25.0%
!! AAAATTGACGTATTTTCGTA+CGG - chr7_3:81101085-81101104 Msa1129150:intron 25.0%
!! GTTTAAAGCATGTGAAATAT+AGG + chr7_3:81101165-81101184 None:intergenic 25.0%
!! AAGGGCAAAACTTTTTAAAT+GGG + chr7_3:81101212-81101231 None:intergenic 25.0%
!! TAAGGGCAAAACTTTTTAAA+TGG + chr7_3:81101213-81101232 None:intergenic 25.0%
! AATAAGGTAAGTGCATATAA+GGG + chr7_3:81101230-81101249 None:intergenic 25.0%
! AAATAAGGTAAGTGCATATA+AGG + chr7_3:81101231-81101250 None:intergenic 25.0%
! ATTGTTCGTATAATTCAAGA+TGG + chr7_3:81101611-81101630 None:intergenic 25.0%
! TTCCTTAATAACCATAAGAT+CGG + chr7_3:81102033-81102052 None:intergenic 25.0%
! ATCTTATGGTTATTAAGGAA+CGG - chr7_3:81102033-81102052 Msa1129150:intron 25.0%
! GATTCCTGTTAAATAAAGTT+AGG - chr7_3:81102372-81102391 Msa1129150:intron 25.0%
! TTCCTGTTAAATAAAGTTAG+GGG - chr7_3:81102374-81102393 Msa1129150:intron 25.0%
!! TGCTATGTAATGATAATGAA+AGG - chr7_3:81102411-81102430 Msa1129150:CDS 25.0%
!! TGATATATTGACTAGTATCT+AGG - chr7_3:81102448-81102467 Msa1129150:CDS 25.0%
! GGCTAAATAAAACAAAGAAT+AGG + chr7_3:81102500-81102519 None:intergenic 25.0%
!!! TCTTTGTTTTATTTAGCCTT+AGG - chr7_3:81102502-81102521 Msa1129150:CDS 25.0%
!! CAAAAAAAGGTATAATCAAC+TGG + chr7_3:81102558-81102577 None:intergenic 25.0%
!! GAAGTAAGTTTTTGTTAGTA+TGG - chr7_3:81102604-81102623 Msa1129150:CDS 25.0%
! TATATTCAAATCTGTTAGAG+AGG - chr7_3:81102635-81102654 Msa1129150:CDS 25.0%
TGACGATAGATAAATATGAC+AGG + chr7_3:81098899-81098918 None:intergenic 30.0%
CACATTTAAGAACCTTAACA+GGG + chr7_3:81098946-81098965 None:intergenic 30.0%
GTTTATTACTATCCATTTGC+GGG - chr7_3:81098983-81099002 Msa1129150:three_prime_UTR 30.0%
!!! GCGAAGATTTTTTTATCACA+TGG + chr7_3:81099819-81099838 None:intergenic 30.0%
TGAGTTCATGAGCTTAATTT+GGG + chr7_3:81099864-81099883 None:intergenic 30.0%
ATGAGTTCATGAGCTTAATT+TGG + chr7_3:81099865-81099884 None:intergenic 30.0%
!! AACTCGTTTATTTTCAACGT+TGG + chr7_3:81099889-81099908 None:intergenic 30.0%
! TAAACCACTAAGTTTTTGCA+AGG - chr7_3:81099937-81099956 Msa1129150:CDS 30.0%
! TTTTCCTTGCAAAAACTTAG+TGG + chr7_3:81099944-81099963 None:intergenic 30.0%
TCGAACCCTAATTATAAAAG+AGG + chr7_3:81100494-81100513 None:intergenic 30.0%
AACTTGTAATCAATTCGGTT+TGG + chr7_3:81101341-81101360 None:intergenic 30.0%
ATGAATTGGAACCATACAAT+GGG - chr7_3:81101453-81101472 Msa1129150:intron 30.0%
! TTTTTCGCCAAATACCATTA+AGG - chr7_3:81101632-81101651 Msa1129150:intron 30.0%
TCTTCTTCCTTAATGGTATT+TGG + chr7_3:81101642-81101661 None:intergenic 30.0%
! ATCTTATCGCTTCATGTTTT+TGG - chr7_3:81101763-81101782 Msa1129150:intron 30.0%
ATTAAAAGCTGAAGTTACAG+AGG - chr7_3:81101989-81102008 Msa1129150:intron 30.0%
GGTGTTTATTTACAACTGTA+AGG - chr7_3:81102054-81102073 Msa1129150:intron 30.0%
GTCCCATACAAGAATATAAA+CGG - chr7_3:81102200-81102219 Msa1129150:intron 30.0%
CTCCGTTTATATTCTTGTAT+GGG + chr7_3:81102205-81102224 None:intergenic 30.0%
TCTCCGTTTATATTCTTGTA+TGG + chr7_3:81102206-81102225 None:intergenic 30.0%
TTATTTAACAGGAATCACGA+CGG + chr7_3:81102368-81102387 None:intergenic 30.0%
TTGTTATATAGATGGCTCAA+AGG + chr7_3:81102683-81102702 None:intergenic 30.0%
! AGTTTAACTTCACAAGGAGT+GGG + chr7_3:81098833-81098852 None:intergenic 35.0%
! TAGTTTAACTTCACAAGGAG+TGG + chr7_3:81098834-81098853 None:intergenic 35.0%
TCTGACATAGATGATCAAGA+AGG - chr7_3:81098857-81098876 Msa1129150:three_prime_UTR 35.0%
GCACATTTAAGAACCTTAAC+AGG + chr7_3:81098947-81098966 None:intergenic 35.0%
GATGTAACACTTGATCAGTT+TGG - chr7_3:81099085-81099104 Msa1129150:three_prime_UTR 35.0%
ATGACGTAAAATTCATCGAG+AGG - chr7_3:81099440-81099459 Msa1129150:three_prime_UTR 35.0%
TTTCTATGCACATGACTTCA+TGG + chr7_3:81099527-81099546 None:intergenic 35.0%
TTTGTAGAGACAAGCAAATG+AGG + chr7_3:81099715-81099734 None:intergenic 35.0%
!! TGATCTGGTGATGTTGATTT+AGG - chr7_3:81100420-81100439 Msa1129150:intron 35.0%
!! GTGATGTTGATTTAGGATCT+TGG - chr7_3:81100427-81100446 Msa1129150:intron 35.0%
ACGCAATAAAAAAAAGCGGA+CGG - chr7_3:81101042-81101061 Msa1129150:intron 35.0%
ACTGTACCAATATGCAACAT+AGG - chr7_3:81101132-81101151 Msa1129150:intron 35.0%
TTTGGACCTATGTTGCATAT+TGG + chr7_3:81101141-81101160 None:intergenic 35.0%
AGCATGTGAAATATAGGGTT+TGG + chr7_3:81101159-81101178 None:intergenic 35.0%
TCAAATGGAGCATGGAAATA+AGG + chr7_3:81101246-81101265 None:intergenic 35.0%
! TGTTTTCTTCAAATGGAGCA+TGG + chr7_3:81101254-81101273 None:intergenic 35.0%
CATTGTATGGTTCCAATTCA+TGG + chr7_3:81101454-81101473 None:intergenic 35.0%
CATGAATTGGAACCATACAA+TGG - chr7_3:81101452-81101471 Msa1129150:intron 35.0%
AGCAGTATCTTCTTCCTTAA+TGG + chr7_3:81101649-81101668 None:intergenic 35.0%
! CTCTAAAGAAGAAAGATCGA+TGG + chr7_3:81101680-81101699 None:intergenic 35.0%
TTACCGTAATATCCAACAAG+TGG + chr7_3:81101885-81101904 None:intergenic 35.0%
ATTCTTGTATGGGACGATAT+AGG + chr7_3:81102195-81102214 None:intergenic 35.0%
AACCTCTTCATATCTTCAGA+GGG + chr7_3:81102257-81102276 None:intergenic 35.0%
AAACCTCTTCATATCTTCAG+AGG + chr7_3:81102258-81102277 None:intergenic 35.0%
AAGGTAGACATCACAAAACT+AGG + chr7_3:81102335-81102354 None:intergenic 35.0%
! AGCCCCTAACTTTATTTAAC+AGG + chr7_3:81102379-81102398 None:intergenic 35.0%
!!! TGCATCTGTTTTAGTCTCTT+AGG - chr7_3:81102531-81102550 Msa1129150:CDS 35.0%
! GTTTTTGTTAGTATGGCACA+CGG - chr7_3:81102611-81102630 Msa1129150:CDS 35.0%
!! GGGAGGATTTGTTATATAGA+TGG + chr7_3:81102691-81102710 None:intergenic 35.0%
CATCGTTAATGTTCACAGTG+CGG - chr7_3:81098774-81098793 Msa1129150:three_prime_UTR 40.0%
! CTTTCTCTACCATTGATGGT+TGG + chr7_3:81098922-81098941 None:intergenic 40.0%
ATCCATTTGCGGGAAGAATT+AGG - chr7_3:81098993-81099012 Msa1129150:three_prime_UTR 40.0%
TCCATTTGCGGGAAGAATTA+GGG - chr7_3:81098994-81099013 Msa1129150:three_prime_UTR 40.0%
!! AAGTTGATGGTGGATTGTAC+CGG - chr7_3:81099031-81099050 Msa1129150:three_prime_UTR 40.0%
AATGAACATGACACCTTCAC+CGG + chr7_3:81099053-81099072 None:intergenic 40.0%
!! AGTTGATGGAAGCAATGGAA+TGG + chr7_3:81099127-81099146 None:intergenic 40.0%
!! ATAGGAGTTGATGGAAGCAA+TGG + chr7_3:81099132-81099151 None:intergenic 40.0%
GAACATCGTATAGGAGTTGA+TGG + chr7_3:81099141-81099160 None:intergenic 40.0%
!! TCGATAATTTGTTCTGAGCC+TGG + chr7_3:81099163-81099182 None:intergenic 40.0%
TGAACCTGTATCTGTCGAAT+GGG + chr7_3:81099190-81099209 None:intergenic 40.0%
TTGAACCTGTATCTGTCGAA+TGG + chr7_3:81099191-81099210 None:intergenic 40.0%
GGGCGTGATGTTACATAATT+TGG + chr7_3:81099798-81099817 None:intergenic 40.0%
!! GGGATCTATTGACTTTGAGT+TGG + chr7_3:81099844-81099863 None:intergenic 40.0%
! GTACTGATGTGATTGAAGCT+TGG + chr7_3:81100056-81100075 None:intergenic 40.0%
AGTACGTATGCTTCAGAGTT+TGG + chr7_3:81100527-81100546 None:intergenic 40.0%
TATTGTATGTGCATCCGGTA+CGG + chr7_3:81100568-81100587 None:intergenic 40.0%
! ACGAGTATTGTATGTGCATC+CGG + chr7_3:81100573-81100592 None:intergenic 40.0%
CAATAAAAAAAAGCGGACGG+TGG - chr7_3:81101045-81101064 Msa1129150:intron 40.0%
TGAGACAATTCATGACTGCA+TGG - chr7_3:81101490-81101509 Msa1129150:intron 40.0%
GAGACAATTCATGACTGCAT+GGG - chr7_3:81101491-81101510 Msa1129150:intron 40.0%
CATTCAACCTGTGTGGAATA+GGG - chr7_3:81101545-81101564 Msa1129150:intron 40.0%
GTGGAATAGGGAGATTCTAA+TGG - chr7_3:81101557-81101576 Msa1129150:intron 40.0%
TGAAGCGATAAGATCGAATG+TGG + chr7_3:81101757-81101776 None:intergenic 40.0%
!! CACAAAAGCATTGCAGTTAG+AGG - chr7_3:81101794-81101813 Msa1129150:intron 40.0%
GTTAACAATTCGCCACTTGT+TGG - chr7_3:81101870-81101889 Msa1129150:intron 40.0%
! TCGCCACTTGTTGGATATTA+CGG - chr7_3:81101879-81101898 Msa1129150:intron 40.0%
! AAGCTTTGTGGAAACCCATT+TGG - chr7_3:81101942-81101961 Msa1129150:intron 40.0%
AAACCCATTTGGTTATGCAG+TGG - chr7_3:81101953-81101972 Msa1129150:intron 40.0%
ACTCCACTGCATAACCAAAT+GGG + chr7_3:81101959-81101978 None:intergenic 40.0%
AACTCCACTGCATAACCAAA+TGG + chr7_3:81101960-81101979 None:intergenic 40.0%
ATTTGGTTATGCAGTGGAGT+TGG - chr7_3:81101959-81101978 Msa1129150:intron 40.0%
AGAGGAATACATGCATTCTG+TGG - chr7_3:81102007-81102026 Msa1129150:intron 40.0%
GGCCGATCTTATGGTTATTA+AGG - chr7_3:81102028-81102047 Msa1129150:intron 40.0%
AGGCTCTCAGAAGTGAATTT+CGG - chr7_3:81102107-81102126 Msa1129150:intron 40.0%
TCTCAGAAGTGAATTTCGGA+TGG - chr7_3:81102111-81102130 Msa1129150:intron 40.0%
CTCAGAAGTGAATTTCGGAT+GGG - chr7_3:81102112-81102131 Msa1129150:intron 40.0%
TCAGAAGTGAATTTCGGATG+GGG - chr7_3:81102113-81102132 Msa1129150:intron 40.0%
TGAATTTCGGATGGGGTAAA+GGG - chr7_3:81102120-81102139 Msa1129150:intron 40.0%
TCTTCAGAGGGCAAACAAAT+TGG + chr7_3:81102245-81102264 None:intergenic 40.0%
GAAGAGGTTTGCAAAAGAGT+TGG - chr7_3:81102268-81102287 Msa1129150:intron 40.0%
AAAGAGTTGGATGAGATGCT+TGG - chr7_3:81102281-81102300 Msa1129150:intron 40.0%
!!! CACTCGGTGTAAGATGATTT+TGG + chr7_3:81102310-81102329 None:intergenic 40.0%
!! ATCACAAAACTAGGAGCACT+CGG + chr7_3:81102326-81102345 None:intergenic 40.0%
TCACGACGGTACAAACTATA+AGG + chr7_3:81102354-81102373 None:intergenic 40.0%
AATCTGTTAGAGAGGAGAGA+AGG - chr7_3:81102643-81102662 Msa1129150:CDS 40.0%
ATCTGTTAGAGAGGAGAGAA+GGG - chr7_3:81102644-81102663 Msa1129150:CDS 40.0%
CTATCGTCACCAACCATCAA+TGG - chr7_3:81098910-81098929 Msa1129150:three_prime_UTR 45.0%
GGGTCTTTCTCTACCATTGA+TGG + chr7_3:81098926-81098945 None:intergenic 45.0%
GGTAGAGAAAGACCCTGTTA+AGG - chr7_3:81098931-81098950 Msa1129150:three_prime_UTR 45.0%
TCCCTAATTCTTCCCGCAAA+TGG + chr7_3:81098998-81099017 None:intergenic 45.0%
ATTTGCGGGAAGAATTAGGG+AGG - chr7_3:81098997-81099016 Msa1129150:three_prime_UTR 45.0%
TTTGCGGGAAGAATTAGGGA+GGG - chr7_3:81098998-81099017 Msa1129150:three_prime_UTR 45.0%
GAAGAATTAGGGAGGGTGAT+GGG - chr7_3:81099005-81099024 Msa1129150:three_prime_UTR 45.0%
TGATGGAAGCAATGGAATGG+AGG + chr7_3:81099124-81099143 None:intergenic 45.0%
CAACTCCTATACGATGTTCC+AGG - chr7_3:81099142-81099161 Msa1129150:three_prime_UTR 45.0%
AGTGCTCCTCTTCATGTCTT+AGG - chr7_3:81100455-81100474 Msa1129150:intron 45.0%
CTCACTCCTAAGACATGAAG+AGG + chr7_3:81100464-81100483 None:intergenic 45.0%
! AAACGATAAAGCACCCGTAC+CGG - chr7_3:81100551-81100570 Msa1129150:intron 45.0%
ATTGTATGTGCATCCGGTAC+GGG + chr7_3:81100567-81100586 None:intergenic 45.0%
!! TACCCGTAACGTAGTGGATA+CGG - chr7_3:81101108-81101127 Msa1129150:intron 45.0%
TACCGTATCCACTACGTTAC+GGG + chr7_3:81101113-81101132 None:intergenic 45.0%
GTACCGTATCCACTACGTTA+CGG + chr7_3:81101114-81101133 None:intergenic 45.0%
GGTTCATAGTGGCCATGAAT+TGG - chr7_3:81101439-81101458 Msa1129150:intron 45.0%
! TTCCACACAGGTTGAATGGA+AGG + chr7_3:81101543-81101562 None:intergenic 45.0%
! CCTATTCCACACAGGTTGAA+TGG + chr7_3:81101547-81101566 None:intergenic 45.0%
CCATTCAACCTGTGTGGAAT+AGG - chr7_3:81101544-81101563 Msa1129150:intron 45.0%
AGAATCTCCCTATTCCACAC+AGG + chr7_3:81101555-81101574 None:intergenic 45.0%
AGATGGTTGCATGTAATGCG+TGG + chr7_3:81101594-81101613 None:intergenic 45.0%
! GTGCATTGACGAAGGTGAAA+TGG + chr7_3:81101735-81101754 None:intergenic 45.0%
! AACTGTTTTGCTTACCCAGC+TGG - chr7_3:81101903-81101922 Msa1129150:intron 45.0%
! TCTCAGATTTGACTCGTGCT+AGG - chr7_3:81102087-81102106 Msa1129150:intron 45.0%
GTGAATTTCGGATGGGGTAA+AGG - chr7_3:81102119-81102138 Msa1129150:intron 45.0%
GAATTTCGGATGGGGTAAAG+GGG - chr7_3:81102121-81102140 Msa1129150:intron 45.0%
! GTGTATGGTGGAGTTGCAAA+AGG - chr7_3:81102143-81102162 Msa1129150:intron 45.0%
! TATGGTGGAGTTGCAAAAGG+TGG - chr7_3:81102146-81102165 Msa1129150:intron 45.0%
! ATGGTGGAGTTGCAAAAGGT+GGG - chr7_3:81102147-81102166 Msa1129150:intron 45.0%
! TGCCCTCTGAAGATATGAAG+AGG - chr7_3:81102252-81102271 Msa1129150:intron 45.0%
AACAGATGCAAAGCAGCCTA+AGG + chr7_3:81102521-81102540 None:intergenic 45.0%
CGTTAATGTTCACAGTGCGG+AGG - chr7_3:81098777-81098796 Msa1129150:three_prime_UTR 50.0%
GGAAGAATTAGGGAGGGTGA+TGG - chr7_3:81099004-81099023 Msa1129150:three_prime_UTR 50.0%
!! ATGGTGGATTGTACCGGTGA+AGG - chr7_3:81099037-81099056 Msa1129150:three_prime_UTR 50.0%
CTGAGCCTGGAACATCGTAT+AGG + chr7_3:81099150-81099169 None:intergenic 50.0%
CCTGTATCTGTCGAATGGGA+CGG + chr7_3:81099186-81099205 None:intergenic 50.0%
TCACACGTCTCAAGTGTGGT+GGG - chr7_3:81101418-81101437 Msa1129150:intron 50.0%
!! CAAGTGTGGTGGGTTCATAG+TGG - chr7_3:81101428-81101447 Msa1129150:intron 50.0%
CAGCTGCATCACCCATTGTA+TGG + chr7_3:81101467-81101486 None:intergenic 50.0%
CATACAATGGGTGATGCAGC+TGG - chr7_3:81101465-81101484 Msa1129150:intron 50.0%
CATGACTGCATGGGCAGAAA+TGG - chr7_3:81101500-81101519 Msa1129150:intron 50.0%
GTCCTTCCATTCAACCTGTG+TGG - chr7_3:81101538-81101557 Msa1129150:intron 50.0%
GGTTGCATGTAATGCGTGGA+GGG + chr7_3:81101590-81101609 None:intergenic 50.0%
TGGTTGCATGTAATGCGTGG+AGG + chr7_3:81101591-81101610 None:intergenic 50.0%
CATAGCTGCTCTTCGTCTCT+TGG - chr7_3:81101707-81101726 Msa1129150:intron 50.0%
! CGAATGTGGTGCATTGACGA+AGG + chr7_3:81101743-81101762 None:intergenic 50.0%
GCAGTTAGAGGCAGATGAAG+AGG - chr7_3:81101806-81101825 Msa1129150:intron 50.0%
GCATTCTGTGGCCGATCTTA+TGG - chr7_3:81102019-81102038 Msa1129150:intron 50.0%
TGGTGGAGTTGCAAAAGGTG+GGG - chr7_3:81102148-81102167 Msa1129150:intron 50.0%
GGGACGATATAGGTTACTCC+AGG + chr7_3:81102185-81102204 None:intergenic 50.0%
!! TGATGGGCGCAAGTTGATGG+TGG - chr7_3:81099021-81099040 Msa1129150:three_prime_UTR 55.0%
CCGTCCCATTCGACAGATAC+AGG - chr7_3:81099183-81099202 Msa1129150:three_prime_UTR 55.0%
GTACGGTACCCGTAACGTAG+TGG - chr7_3:81101102-81101121 Msa1129150:intron 55.0%
CAGGTCACACGTCTCAAGTG+TGG - chr7_3:81101414-81101433 Msa1129150:intron 55.0%
GTCACACGTCTCAAGTGTGG+TGG - chr7_3:81101417-81101436 Msa1129150:intron 55.0%
ACCACTGCAGCGAAGCTTTG+TGG - chr7_3:81101930-81101949 Msa1129150:intron 55.0%
TCCACAAAGCTTCGCTGCAG+TGG + chr7_3:81101934-81101953 None:intergenic 55.0%
! GGATGGGGTAAAGGGGTGTA+TGG - chr7_3:81102128-81102147 Msa1129150:intron 55.0%
! TGGGGTAAAGGGGTGTATGG+TGG - chr7_3:81102131-81102150 Msa1129150:intron 55.0%
CTGGTGGCACCAACTCTGGT+TGG + chr7_3:81098805-81098824 None:intergenic 60.0%
TCACAAGGAGTGGGTGCAGC+TGG + chr7_3:81098824-81098843 None:intergenic 60.0%
!! GGGTGATGGGCGCAAGTTGA+TGG - chr7_3:81099018-81099037 Msa1129150:three_prime_UTR 60.0%
GCATGGGCAGAAATGGCTCG+AGG - chr7_3:81101507-81101526 Msa1129150:intron 60.0%
GAGTCGTCAATGCACGCTCG+AGG - chr7_3:81101841-81101860 Msa1129150:intron 60.0%
GGAGTTGCAAAAGGTGGGGC+TGG - chr7_3:81102152-81102171 Msa1129150:intron 60.0%
! GGTGGGGCTGGAACTTTTCC+TGG - chr7_3:81102164-81102183 Msa1129150:intron 60.0%
!! GCGGAGGTGCCAACCAGAGT+TGG - chr7_3:81098793-81098812 Msa1129150:three_prime_UTR 65.0%
GCAGCTGGTGGCACCAACTC+TGG + chr7_3:81098809-81098828 None:intergenic 65.0%
CAAGGAGTGGGTGCAGCTGG+TGG + chr7_3:81098821-81098840 None:intergenic 65.0%
! CTGCAGTGGTGACGCCAGCT+GGG + chr7_3:81101920-81101939 None:intergenic 65.0%
! GCTGCAGTGGTGACGCCAGC+TGG + chr7_3:81101921-81101940 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 81098764 81102769 81098764 ID=Msa1129150;Name=Msa1129150
chr7_3 mRNA 81098764 81102769 81098764 ID=Msa1129150-mRNA-1;Parent=Msa1129150;Name=Msa1129150-mRNA-1;_AED=0.30;_eAED=0.30;_QI=0|0|0.33|1|0.5|0.33|3|927|270
chr7_3 exon 81098764 81100116 81098764 ID=Msa1129150-mRNA-1:exon:23527;Parent=Msa1129150-mRNA-1
chr7_3 exon 81102377 81102580 81102377 ID=Msa1129150-mRNA-1:exon:23526;Parent=Msa1129150-mRNA-1
chr7_3 exon 81102587 81102769 81102587 ID=Msa1129150-mRNA-1:exon:23525;Parent=Msa1129150-mRNA-1
chr7_3 CDS 81102587 81102769 81102587 ID=Msa1129150-mRNA-1:cds;Parent=Msa1129150-mRNA-1
chr7_3 CDS 81102377 81102580 81102377 ID=Msa1129150-mRNA-1:cds;Parent=Msa1129150-mRNA-1
chr7_3 CDS 81099691 81100116 81099691 ID=Msa1129150-mRNA-1:cds;Parent=Msa1129150-mRNA-1
chr7_3 three_prime_UTR 81098764 81099690 81098764 ID=Msa1129150-mRNA-1:three_prime_utr;Parent=Msa1129150-mRNA-1
Gene Sequence

>Msa1129150

ATGATTTCGTCATCGTTAATGTTCACAGTGCGGAGGTGCCAACCAGAGTTGGTGCCACCAGCTGCACCCACTCCTTGTGAAGTTAAACTATTATCTGACATAGATGATCAAGAAGGTATGCGTTTCAATAGTCCTGTCATATTTATCTATCGTCACCAACCATCAATGGTAGAGAAAGACCCTGTTCTTAAATGTGCACTCTCAAAAACACTTGTTTATTACTATCCATTTGCGGGAAGAATTAGGGAGGGTGATGGGCGCAAGTTGATGGTGGATTGTACCGGTGAAGGTGTCATGTTCATTGAAGCTGAAGCTGATGTAACACTTGATCAGTTTGGTGATGCTCTACATCCTCCATTCCATTGCTTCCATCAACTCCTATACGATGTCACACGTCTCAAGTGTGGTGGGTTCATAGTGGCCATGAATTGGAACCATACAATGGGTGATGCAGCTGGTTTGAGACAATTCATGACTGCATGGGCAGAAATGGCTCGAGGAGCACATCGTCCTTCCATTCAACCTGTGTGGAATAGGGAGATTCTAATGGCAAGAGACCCTCCACGCATTACATGCAACCATCTTGAATTATACGAACAATTTTTTTCGCCAAATACCATTAAGGAAGAAGATACTGCTTCTCTAGTCCATCGATCTTTCTTCTTTAGAGCTTCTGACATAGCTGCTCTTCGTCTCTTGGTTCCATTTCACCTTCGTCAATGCACCACATTCGATCTTATCGCTTCATGTTTTTGGTGTTGTCGCACAAAAGCATTGCAGTTAGAGGCAGATGAAGAGGTACGAATGATGTGA
Protein sequence

>Msa1129150

MISSSLMFTVRRCQPELVPPAAPTPCEVKLLSDIDDQEGMRFNSPVIFIYRHQPSMVEKDPVLKCALSKTLVYYYPFAGRIREGDGRKLMVDCTGEGVMFIEAEADVTLDQFGDALHPPFHCFHQLLYDVTRLKCGGFIVAMNWNHTMGDAAGLRQFMTAWAEMARGAHRPSIQPVWNREILMARDPPRITCNHLELYEQFFSPNTIKEEDTASLVHRSFFFRASDIAALRLLVPFHLRQCTTFDLIASCFWCCRTKALQLEADEEVRMM*