AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0581150

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0581150 MtrunA17_Chr7g0269231 98.462 260 1 1 1 257 1 260 0.0 525
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0581150 AT1G02880.3 68.750 256 78 1 1 256 4 257 1.35e-133 378
Msa0581150 AT1G02880.2 68.750 256 78 1 1 256 1 254 1.52e-133 377
Msa0581150 AT2G44750.2 67.969 256 79 1 1 256 5 257 1.37e-132 375
Msa0581150 AT1G02880.6 67.176 262 78 2 1 256 4 263 6.01e-131 371
Msa0581150 AT2G44750.1 67.578 256 78 2 1 256 5 255 2.37e-130 369
Msa0581150 AT1G02880.5 73.889 180 47 0 77 256 8 187 7.08e-96 280
Msa0581150 AT1G02880.1 73.889 180 47 0 77 256 8 187 7.08e-96 280
Msa0581150 AT1G02880.4 72.941 170 46 0 87 256 1 170 3.31e-88 259

Find 87 sgRNAs with CRISPR-Local

Find 315 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATTTACTGTACAAATTA+TGG 0.096100 4_1:-86483225 Msa0581150:three_prime_UTR
ACCTCTGATTTATCAGTATT+TGG 0.123339 4_1:+86484485 None:intergenic
CTTCCATTATTATTGGTTAT+TGG 0.154032 4_1:+86483159 None:intergenic
TCCTGAACTTCCATTATTAT+TGG 0.161699 4_1:+86483152 None:intergenic
CCAAAGCAAAGGAGCGAATT+TGG 0.179692 4_1:+86487118 None:intergenic
ATGGGTCTTATTCCATTTAA+AGG 0.209884 4_1:-86483313 Msa0581150:three_prime_UTR
TTCCATTATTATTGGTTATT+GGG 0.226514 4_1:+86483160 None:intergenic
TTCCATGTCCATTAATTAGA+TGG 0.243974 4_1:-86483332 Msa0581150:three_prime_UTR
AAGGGAGTTATTCATTGATT+TGG 0.251535 4_1:-86483194 Msa0581150:three_prime_UTR
TACGAACATGAGAAGGATTT+TGG 0.259220 4_1:+86486921 None:intergenic
CCAAATTCGCTCCTTTGCTT+TGG 0.262944 4_1:-86487118 Msa0581150:CDS
CAAATTCGCTCCTTTGCTTT+GGG 0.270102 4_1:-86487117 Msa0581150:CDS
AAAAGGTTGTAGTGAGGTTT+TGG 0.270539 4_1:-86487278 Msa0581150:five_prime_UTR
AGTCTGATTCAGATCTTCTT+TGG 0.283649 4_1:-86483417 Msa0581150:CDS
AGCACATCAAATATTGTAAA+AGG 0.285187 4_1:-86483457 Msa0581150:CDS
AAGAAAGTCTGGCCTTTAAA+TGG 0.287584 4_1:+86483301 None:intergenic
AATAAGACCCATCTAATTAA+TGG 0.291612 4_1:+86483324 None:intergenic
ACCAATAATAATGGAAGTTC+AGG 0.301165 4_1:-86483153 Msa0581150:three_prime_UTR
ATTTATCAGTATTTGGTATA+AGG 0.310511 4_1:+86484492 None:intergenic
ATTAATGGACATGGAAGATA+TGG 0.317023 4_1:+86483339 None:intergenic
TCATTTACTGTACAAATTAT+GGG 0.320724 4_1:-86483224 Msa0581150:three_prime_UTR
CATTGTGGACTCGTTCCTAT+TGG 0.325599 4_1:-86483976 Msa0581150:CDS
AGGGAGTTATTCATTGATTT+GGG 0.339085 4_1:-86483193 Msa0581150:three_prime_UTR
TTCCCAATAACCAATAATAA+TGG 0.344674 4_1:-86483162 Msa0581150:three_prime_UTR
TCCTGTGGTTGTAGAACTTC+CGG 0.357660 4_1:+86483945 None:intergenic
CAAAGCAAAGGAGCGAATTT+GGG 0.363044 4_1:+86487119 None:intergenic
CAGCTATGCATTCTTGCTGT+TGG 0.376459 4_1:-86484159 Msa0581150:CDS
GGGAGATTTGATCACGAGAT+TGG 0.378181 4_1:-86484126 Msa0581150:CDS
GAGGACACAGAGATGAGATT+TGG 0.378288 4_1:-86483490 Msa0581150:CDS
ATGTCACCTTTGATTGCATC+AGG 0.379819 4_1:+86484827 None:intergenic
ATTCTTGCTGTTGGAGCACT+TGG 0.384460 4_1:-86484150 Msa0581150:CDS
ACGGAAGAAGAAGAAGTTTC+CGG 0.385489 4_1:+86487182 None:intergenic
ATTGTGGACTCGTTCCTATT+GGG 0.388599 4_1:-86483975 Msa0581150:CDS
TATTCGGCTTATTACATGAA+TGG 0.392673 4_1:+86483080 None:intergenic
CTTCCGGATGGCATCCCAAT+AGG 0.427717 4_1:+86483961 None:intergenic
CATATACGAGTTTGCGCTGA+TGG 0.437248 4_1:-86486989 Msa0581150:CDS
GTTGGTTTCGTACCTGTGTT+TGG 0.439797 4_1:+86487435 None:intergenic
CTTGCTGTTGGAGCACTTGG+TGG 0.445518 4_1:-86484147 Msa0581150:CDS
ATCTTATGCGAGTAATTCTT+CGG 0.450082 4_1:+86484027 None:intergenic
TACATGTTGCATACTGCACC+TGG 0.452863 4_1:-86483366 Msa0581150:three_prime_UTR
ACAAATTATGGGAGGGTGAA+AGG 0.460413 4_1:-86483213 Msa0581150:three_prime_UTR
GAAGAGAAGCATCAATCGTT+AGG 0.461340 4_1:-86487249 Msa0581150:five_prime_UTR
TGAGGCAATCATCAGATAGA+AGG 0.467880 4_1:+86484061 None:intergenic
AACAAATTTACAATTAGTAG+CGG 0.472580 4_1:-86487410 Msa0581150:five_prime_UTR
CAAATTATGGGAGGGTGAAA+GGG 0.475106 4_1:-86483212 Msa0581150:three_prime_UTR
AATTTCTATCAAGAAGCTCT+AGG 0.492838 4_1:-86483392 Msa0581150:exon
AAGGTGACATGGATTCAATC+AGG 0.496191 4_1:-86484814 Msa0581150:CDS
AATTGACGAGTCTCAAGATC+AGG 0.499779 4_1:-86484555 Msa0581150:CDS
GTTCCTATTGGGATGCCATC+CGG 0.507989 4_1:-86483964 Msa0581150:CDS
TCCATGTCCATTAATTAGAT+GGG 0.518703 4_1:-86483331 Msa0581150:three_prime_UTR
TTCATTCAATCTTCTGTCGA+GGG 0.519105 4_1:-86484003 Msa0581150:CDS
GACACAGAGATGAGATTTGG+CGG 0.521420 4_1:-86483487 Msa0581150:CDS
ATCCTTCTCATGTTCGTACC+AGG 0.523054 4_1:-86486916 Msa0581150:intron
CATGGAAGATATGGAAAGCC+AGG 0.523067 4_1:+86483348 None:intergenic
CATCAATCGTTAGGATAGGA+TGG 0.529835 4_1:-86487240 Msa0581150:exon
TTGCTGTTGGAGCACTTGGT+GGG 0.532035 4_1:-86484146 Msa0581150:CDS
CTTCATTCAATCTTCTGTCG+AGG 0.535339 4_1:-86484004 Msa0581150:CDS
ACAAATTTACAATTAGTAGC+GGG 0.545015 4_1:-86487409 Msa0581150:five_prime_UTR
GCTCCTTTGCTTTGGGACCA+CGG 0.545810 4_1:-86487110 Msa0581150:intron
TCTTCGGAAGAAGTTGAATG+AGG 0.557423 4_1:+86484043 None:intergenic
TAGAAGGATAATGCGCGTGT+TGG 0.565349 4_1:+86484077 None:intergenic
GAAGCATCAATCGTTAGGAT+AGG 0.569437 4_1:-86487244 Msa0581150:five_prime_UTR
TCCGGAAGTTCTACAACCAC+AGG 0.570611 4_1:-86483946 Msa0581150:CDS
ACCCATCTAATTAATGGACA+TGG 0.570935 4_1:+86483330 None:intergenic
AATACTTACTGAGGTCCCAC+TGG 0.575667 4_1:+86483920 None:intergenic
CATTTCATCATACACACGGT+TGG 0.576112 4_1:+86486961 None:intergenic
TTTACTGTACAAATTATGGG+AGG 0.587647 4_1:-86483221 Msa0581150:three_prime_UTR
TGATGCAATCAAAGGTGACA+TGG 0.600849 4_1:-86484825 Msa0581150:CDS
ACTTGATTTCTATGCAAACC+TGG 0.601776 4_1:-86484783 Msa0581150:intron
ACCAAATACTGATAAATCAG+AGG 0.604378 4_1:-86484486 Msa0581150:intron
AAGAGCGTATGTCAGAGAAA+CGG 0.605988 4_1:+86487163 None:intergenic
ATACCGTGGTCCCAAAGCAA+AGG 0.614254 4_1:+86487107 None:intergenic
TACAAGCCTGATGCAATCAA+AGG 0.623735 4_1:-86484833 Msa0581150:CDS
TACCTGGTACGAACATGAGA+AGG 0.628823 4_1:+86486914 None:intergenic
AGTAAAAGAAACATAAACAA+AGG 0.633072 4_1:+86483249 None:intergenic
ATACGAGTTTGCGCTGATGG+AGG 0.633325 4_1:-86486986 Msa0581150:CDS
TCTGTCGAGGGTCCACATTG+TGG 0.635034 4_1:-86483991 Msa0581150:CDS
GAGGTCCCACTGGAGTCCTG+TGG 0.635982 4_1:+86483930 None:intergenic
TTACTGTACAAATTATGGGA+GGG 0.636161 4_1:-86483220 Msa0581150:three_prime_UTR
CTTTATCATTGACCAAACAC+AGG 0.643382 4_1:-86487447 Msa0581150:five_prime_UTR
CTACAACCACAGGACTCCAG+TGG 0.662065 4_1:-86483936 Msa0581150:CDS
TACAACCACAGGACTCCAGT+GGG 0.664787 4_1:-86483935 Msa0581150:CDS
AACACATTTGTGTAAATCTG+TGG 0.677485 4_1:+86484529 None:intergenic
GTGGTTGTAGAACTTCCGGA+TGG 0.690304 4_1:+86483949 None:intergenic
GAGGCATTTCATCATACACA+CGG 0.695989 4_1:+86486957 None:intergenic
GAAGAAGAAGAAGTTTCCGG+TGG 0.697049 4_1:+86487185 None:intergenic
ATAGGAACGAGTCCACAATG+TGG 0.758602 4_1:+86483979 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATATGTTAAAAAATAAG+AGG - chr4_1:86483169-86483188 Msa0581150:three_prime_UTR 10.0%
!! ATATCTTATAATATAAAAGA+GGG + chr4_1:86483460-86483479 None:intergenic 10.0%
!! TATATCTTATAATATAAAAG+AGG + chr4_1:86483461-86483480 None:intergenic 10.0%
!!! TAATTGTAAATTTGTTTTGT+TGG + chr4_1:86483094-86483113 None:intergenic 15.0%
!! ATAAATAAATAACGCAAAAA+AGG - chr4_1:86483213-86483232 Msa0581150:three_prime_UTR 15.0%
!! TATCTTATAATATAAAAGAG+GGG + chr4_1:86483459-86483478 None:intergenic 15.0%
!!! AAAAAATGATTATCATTTTG+TGG + chr4_1:86483758-86483777 None:intergenic 15.0%
!!! TTGTGTTAATTGTTTTATTT+AGG - chr4_1:86484000-86484019 Msa0581150:CDS 15.0%
!!! TGTGTTAATTGTTTTATTTA+GGG - chr4_1:86484001-86484020 Msa0581150:CDS 15.0%
!! AGTTACATATCTTTAATATT+TGG + chr4_1:86484517-86484536 None:intergenic 15.0%
!! TCTAGTATTAAATTTATTAG+TGG + chr4_1:86484781-86484800 None:intergenic 15.0%
!! TATTCATAATATGAAACAAA+AGG - chr4_1:86484862-86484881 Msa0581150:intron 15.0%
!! ATTCATAATATGAAACAAAA+GGG - chr4_1:86484863-86484882 Msa0581150:intron 15.0%
!!! GTTATTGTTTTACTATTTAT+AGG - chr4_1:86484934-86484953 Msa0581150:intron 15.0%
!! AGATAAAATGATTTATGTTT+GGG + chr4_1:86485394-86485413 None:intergenic 15.0%
!! AAGATAAAATGATTTATGTT+TGG + chr4_1:86485395-86485414 None:intergenic 15.0%
!! AAAACATAAAGATATAGATA+GGG + chr4_1:86485758-86485777 None:intergenic 15.0%
!! AAAAACATAAAGATATAGAT+AGG + chr4_1:86485759-86485778 None:intergenic 15.0%
!! AACAAATTTACAATTAGTAG+CGG - chr4_1:86483098-86483117 Msa0581150:three_prime_UTR 20.0%
!! ATATGTTAAAAAATAAGAGG+AGG - chr4_1:86483172-86483191 Msa0581150:three_prime_UTR 20.0%
!! ACTAATTAGGTATAACTATA+AGG - chr4_1:86483836-86483855 Msa0581150:intron 20.0%
!! TTTGTAAAAAATAGCAACTT+TGG + chr4_1:86483916-86483935 None:intergenic 20.0%
!!! GTGTTAATTGTTTTATTTAG+GGG - chr4_1:86484002-86484021 Msa0581150:CDS 20.0%
!! TTTGAGTAAAATAGCAAAAA+TGG - chr4_1:86484135-86484154 Msa0581150:CDS 20.0%
!!! AAAAATGGTGATGTTTAAAA+TGG - chr4_1:86484150-86484169 Msa0581150:CDS 20.0%
!!! TCAAACTTAAGTAATTTTTC+TGG - chr4_1:86484413-86484432 Msa0581150:intron 20.0%
!! TTGTATATTTATGCTAATGA+TGG - chr4_1:86484491-86484510 Msa0581150:CDS 20.0%
!!! GTATTTCTTTTTGAATAGTA+TGG + chr4_1:86484806-86484825 None:intergenic 20.0%
!! TTGTACTAGTTGTATATAAT+TGG + chr4_1:86484914-86484933 None:intergenic 20.0%
!!! TCTTTATACATTATTGCTTT+TGG - chr4_1:86485125-86485144 Msa0581150:intron 20.0%
!!! CTTTATACATTATTGCTTTT+GGG - chr4_1:86485126-86485145 Msa0581150:intron 20.0%
!!! AATTGATTTTGGTATGTTAA+GGG - chr4_1:86485261-86485280 Msa0581150:intron 20.0%
!! ATGCAAAATCAATTCTAATT+AGG + chr4_1:86485288-86485307 None:intergenic 20.0%
!! GATAAAATGATTTATGTTTG+GGG + chr4_1:86485393-86485412 None:intergenic 20.0%
!!! TGATTTTGCATAATTGATTT+TGG + chr4_1:86485432-86485451 None:intergenic 20.0%
!!! CAATTATGCAAAATCAATTT+TGG - chr4_1:86485436-86485455 Msa0581150:intron 20.0%
!! TGGAGGATTATAAATTATAA+TGG - chr4_1:86485495-86485514 Msa0581150:intron 20.0%
!! ATTTATCAGTATTTGGTATA+AGG + chr4_1:86486019-86486038 None:intergenic 20.0%
!!! CTTTATTATTGAATTTTGCA+AGG - chr4_1:86486066-86486085 Msa0581150:intron 20.0%
!! AAGAATAAAAATAATGCATC+TGG + chr4_1:86486694-86486713 None:intergenic 20.0%
!! AGTTTATTTAGTTACTCATA+AGG + chr4_1:86486768-86486787 None:intergenic 20.0%
!! AGTAAAAGAAACATAAACAA+AGG + chr4_1:86487262-86487281 None:intergenic 20.0%
!! TTCATTTACTGTACAAATTA+TGG - chr4_1:86487283-86487302 Msa0581150:five_prime_UTR 20.0%
!! TCATTTACTGTACAAATTAT+GGG - chr4_1:86487284-86487303 Msa0581150:five_prime_UTR 20.0%
!!! TTCCATTATTATTGGTTATT+GGG + chr4_1:86487351-86487370 None:intergenic 20.0%
! ACAAATTTACAATTAGTAGC+GGG - chr4_1:86483099-86483118 Msa0581150:three_prime_UTR 25.0%
! AGATGATTCATGTATGTTAT+TGG - chr4_1:86483481-86483500 Msa0581150:CDS 25.0%
! GAAAAAAAAAAAGTTGTACC+TGG + chr4_1:86483613-86483632 None:intergenic 25.0%
!! ATGATTATCATTTTGTGGAT+AGG + chr4_1:86483753-86483772 None:intergenic 25.0%
!! CTATTCAATTAGTTTCTTGA+AGG - chr4_1:86483888-86483907 Msa0581150:intron 25.0%
! TCTACATTACGTATTATATG+TGG - chr4_1:86483940-86483959 Msa0581150:CDS 25.0%
! CTACATTACGTATTATATGT+GGG - chr4_1:86483941-86483960 Msa0581150:CDS 25.0%
! TACATTACGTATTATATGTG+GGG - chr4_1:86483942-86483961 Msa0581150:CDS 25.0%
! AGGGGTAATAAAATTAGAAA+AGG - chr4_1:86484020-86484039 Msa0581150:CDS 25.0%
! GTCAATCAGTAATTAAGTAA+TGG + chr4_1:86484308-86484327 None:intergenic 25.0%
!! AACTTAAGTAATTTTTCTGG+AGG - chr4_1:86484416-86484435 Msa0581150:intron 25.0%
! GTGAACTGAAAACATAAATA+AGG + chr4_1:86484551-86484570 None:intergenic 25.0%
!!! ACTTCATTTTTTGCTATACA+TGG - chr4_1:86484647-86484666 Msa0581150:intron 25.0%
!! GAAATTTTGAGCAATGTTTA+AGG + chr4_1:86484836-86484855 None:intergenic 25.0%
! ATATAATCTGTTGTCAATAG+CGG + chr4_1:86485047-86485066 None:intergenic 25.0%
! GACAACAGATTATATATAAG+TGG - chr4_1:86485052-86485071 Msa0581150:intron 25.0%
! AACAATATCTTTCAATGTGT+TGG - chr4_1:86485079-86485098 Msa0581150:intron 25.0%
! ACATGTACAAAATAGACATT+AGG + chr4_1:86485196-86485215 None:intergenic 25.0%
!!! GAATTGATTTTGGTATGTTA+AGG - chr4_1:86485260-86485279 Msa0581150:intron 25.0%
!! ATCGATTCTAACTTAAAGTT+CGG - chr4_1:86485313-86485332 Msa0581150:intron 25.0%
!!! AGTACTTGTTTTAGTTTTGT+TGG - chr4_1:86485566-86485585 Msa0581150:intron 25.0%
!! TATTATTGAATTTTGCAAGG+AGG - chr4_1:86486069-86486088 Msa0581150:intron 25.0%
! TAATTCTTTACTATCAAGCA+TGG + chr4_1:86486191-86486210 None:intergenic 25.0%
! AAATATACAAGATTCAAGCA+GGG + chr4_1:86486277-86486296 None:intergenic 25.0%
! TAAATATACAAGATTCAAGC+AGG + chr4_1:86486278-86486297 None:intergenic 25.0%
!! GTATATTTAGTTGTACCTTT+TGG - chr4_1:86486289-86486308 Msa0581150:intron 25.0%
! AAAATATGCAATACTTACTG+AGG + chr4_1:86486600-86486619 None:intergenic 25.0%
! CTGTTGTTAATTAGAGTTAT+AGG - chr4_1:86486720-86486739 Msa0581150:intron 25.0%
! TGTTAATTAGAGTTATAGGA+TGG - chr4_1:86486724-86486743 Msa0581150:intron 25.0%
!! TATTTTGTCAACAATTTCAG+AGG - chr4_1:86486999-86487018 Msa0581150:intron 25.0%
! AGCACATCAAATATTGTAAA+AGG - chr4_1:86487051-86487070 Msa0581150:intron 25.0%
! AATAAGACCCATCTAATTAA+TGG + chr4_1:86487187-86487206 None:intergenic 25.0%
! AGCAGATCTAACAAAAAAAA+AGG + chr4_1:86487237-86487256 None:intergenic 25.0%
! TTCCCAATAACCAATAATAA+TGG - chr4_1:86487346-86487365 Msa0581150:five_prime_UTR 25.0%
!! CTTCCATTATTATTGGTTAT+TGG + chr4_1:86487352-86487371 None:intergenic 25.0%
! AAAAACATACATCTAAGTCA+AGG + chr4_1:86487403-86487422 None:intergenic 25.0%
!!! TTTTTTCTTCCTTTCCCAAT+CGG - chr4_1:86483626-86483645 Msa0581150:intron 30.0%
!!! TTTTCTACTAGTTTAGCTCT+TGG - chr4_1:86483668-86483687 Msa0581150:intron 30.0%
TTCAGTACAGTAATGATTTC+TGG - chr4_1:86483777-86483796 Msa0581150:intron 30.0%
AAATTATTTGTAGCTGTAGC+TGG - chr4_1:86483975-86483994 Msa0581150:CDS 30.0%
!!! ACCTTTTTTGTAGTTGAGAA+AGG - chr4_1:86484091-86484110 Msa0581150:CDS 30.0%
ACCTTTCTCAACTACAAAAA+AGG + chr4_1:86484095-86484114 None:intergenic 30.0%
! AATGGTGATGTTTAAAATGG+AGG - chr4_1:86484153-86484172 Msa0581150:CDS 30.0%
! ATGGTGATGTTTAAAATGGA+GGG - chr4_1:86484154-86484173 Msa0581150:CDS 30.0%
ATAGAGAGAAATGTAGAGAA+AGG - chr4_1:86484211-86484230 Msa0581150:intron 30.0%
AGCATAAATATACAAGCCTT+AGG + chr4_1:86484486-86484505 None:intergenic 30.0%
TACTATTTATAGGTTCGCTT+TGG - chr4_1:86484944-86484963 Msa0581150:intron 30.0%
GTACAAAATAGACATTAGGT+GGG + chr4_1:86485192-86485211 None:intergenic 30.0%
TGTACAAAATAGACATTAGG+TGG + chr4_1:86485193-86485212 None:intergenic 30.0%
!! TGTTTGAATTCACTTTTGAG+AGG - chr4_1:86485213-86485232 Msa0581150:intron 30.0%
AAATAAACTTCACGTGCATT+TGG + chr4_1:86485473-86485492 None:intergenic 30.0%
CATAAAGATATAGATAGGGA+GGG + chr4_1:86485754-86485773 None:intergenic 30.0%
ACATAAAGATATAGATAGGG+AGG + chr4_1:86485755-86485774 None:intergenic 30.0%
TGTTTGTCAATGTCATGTAA+TGG - chr4_1:86485784-86485803 Msa0581150:intron 30.0%
GATTTAAGAACTCAACTTTC+TGG - chr4_1:86485814-86485833 Msa0581150:intron 30.0%
ATACAAAGTAGCAGTAACAT+AGG + chr4_1:86485866-86485885 None:intergenic 30.0%
AACACATTTGTGTAAATCTG+TGG + chr4_1:86485982-86486001 None:intergenic 30.0%
ACCAAATACTGATAAATCAG+AGG - chr4_1:86486022-86486041 Msa0581150:intron 30.0%
ACCTCTGATTTATCAGTATT+TGG + chr4_1:86486026-86486045 None:intergenic 30.0%
TCAGAGGTAAGTTAAATATC+TGG - chr4_1:86486038-86486057 Msa0581150:intron 30.0%
AAGCTGAGATTAATTCCAAA+AGG + chr4_1:86486307-86486326 None:intergenic 30.0%
TGACATATCTCTCAAAATGA+TGG - chr4_1:86486326-86486345 Msa0581150:intron 30.0%
ATCTTATGCGAGTAATTCTT+CGG + chr4_1:86486484-86486503 None:intergenic 30.0%
AGTAGAATATCAACACATGA+CGG - chr4_1:86486800-86486819 Msa0581150:intron 30.0%
ACTAACAAACAAGATCACAA+CGG + chr4_1:86486958-86486977 None:intergenic 30.0%
AATTTCTATCAAGAAGCTCT+AGG - chr4_1:86487116-86487135 Msa0581150:CDS 30.0%
! ATTAATGGACATGGAAGATA+TGG + chr4_1:86487172-86487191 None:intergenic 30.0%
TTCCATGTCCATTAATTAGA+TGG - chr4_1:86487176-86487195 Msa0581150:CDS 30.0%
TCCATGTCCATTAATTAGAT+GGG - chr4_1:86487177-86487196 Msa0581150:CDS 30.0%
!! ATGGGTCTTATTCCATTTAA+AGG - chr4_1:86487195-86487214 Msa0581150:CDS 30.0%
TTTACTGTACAAATTATGGG+AGG - chr4_1:86487287-86487306 Msa0581150:five_prime_UTR 30.0%
TTACTGTACAAATTATGGGA+GGG - chr4_1:86487288-86487307 Msa0581150:five_prime_UTR 30.0%
! AAGGGAGTTATTCATTGATT+TGG - chr4_1:86487314-86487333 Msa0581150:five_prime_UTR 30.0%
!! AGGGAGTTATTCATTGATTT+GGG - chr4_1:86487315-86487334 Msa0581150:five_prime_UTR 30.0%
! ACCAATAATAATGGAAGTTC+AGG - chr4_1:86487355-86487374 Msa0581150:five_prime_UTR 30.0%
TCCTGAACTTCCATTATTAT+TGG + chr4_1:86487359-86487378 None:intergenic 30.0%
TATTCGGCTTATTACATGAA+TGG + chr4_1:86487431-86487450 None:intergenic 30.0%
! GTACCAAAAACGTTGTTATT+CGG + chr4_1:86487447-86487466 None:intergenic 30.0%
CTTTATCATTGACCAAACAC+AGG - chr4_1:86483061-86483080 Msa0581150:three_prime_UTR 35.0%
! AAAAGGTTGTAGTGAGGTTT+TGG - chr4_1:86483230-86483249 Msa0581150:three_prime_UTR 35.0%
! TTCAACTTTTCTTCTTCCAC+CGG - chr4_1:86483307-86483326 Msa0581150:three_prime_UTR 35.0%
AAAGAGGGGTAAGAATTGAA+AGG + chr4_1:86483445-86483464 None:intergenic 35.0%
! TACGAACATGAGAAGGATTT+TGG + chr4_1:86483590-86483609 None:intergenic 35.0%
! TTTTTCTTCCTTTCCCAATC+GGG - chr4_1:86483627-86483646 Msa0581150:intron 35.0%
!!! ACTCTGTGTTTCACCTTTTT+TGG - chr4_1:86483704-86483723 Msa0581150:intron 35.0%
!!! CTCTGTGTTTCACCTTTTTT+GGG - chr4_1:86483705-86483724 Msa0581150:intron 35.0%
!!! TCTGTGTTTCACCTTTTTTG+GGG - chr4_1:86483706-86483725 Msa0581150:intron 35.0%
TTACGTATTATATGTGGGGA+TGG - chr4_1:86483946-86483965 Msa0581150:CDS 35.0%
TACGTATTATATGTGGGGAT+GGG - chr4_1:86483947-86483966 Msa0581150:CDS 35.0%
CTCAACTACAAAAAAGGTAG+AGG + chr4_1:86484089-86484108 None:intergenic 35.0%
! ATTACTGATTGACCTCAAGT+AGG - chr4_1:86484315-86484334 Msa0581150:intron 35.0%
AGTTTGATTCCTAGAGTTGT+TGG + chr4_1:86484400-86484419 None:intergenic 35.0%
GTGTTGGGAGAGTTTATATT+TGG + chr4_1:86484454-86484473 None:intergenic 35.0%
AGGTAATAGGAGTGAACTTA+TGG - chr4_1:86484581-86484600 Msa0581150:intron 35.0%
GGTAATAGGAGTGAACTTAT+GGG - chr4_1:86484582-86484601 Msa0581150:intron 35.0%
AAGGGATAGCAAAATCGAAA+AGG - chr4_1:86484881-86484900 Msa0581150:intron 35.0%
AGGGATAGCAAAATCGAAAA+GGG - chr4_1:86484882-86484901 Msa0581150:intron 35.0%
!!! GCTTTTGGGATTGATGTTAT+TGG - chr4_1:86485140-86485159 Msa0581150:intron 35.0%
! GAAGTCTTCGAAATCACTTT+TGG + chr4_1:86485240-86485259 None:intergenic 35.0%
!! CGAAGACTTCGAATTGATTT+TGG - chr4_1:86485250-86485269 Msa0581150:intron 35.0%
TGCACGTGAAGTTTATTTGT+TGG - chr4_1:86485475-86485494 Msa0581150:intron 35.0%
! ACGTGAAGTTTATTTGTTGG+AGG - chr4_1:86485478-86485497 Msa0581150:intron 35.0%
CACTAAAAGCTCTGTAAAAG+TGG - chr4_1:86485521-86485540 Msa0581150:intron 35.0%
!! GGTTTGTTTTTCTGTGTTAC+TGG - chr4_1:86485542-86485561 Msa0581150:intron 35.0%
!!! TAAGTGTTGAGTTTTCTGTC+AGG - chr4_1:86485652-86485671 Msa0581150:intron 35.0%
ACTTGATTTCTATGCAAACC+TGG - chr4_1:86485725-86485744 Msa0581150:intron 35.0%
TCACACCAAAATGCTGTTAT+TGG - chr4_1:86485838-86485857 Msa0581150:intron 35.0%
! AGGAACCAATAACAGCATTT+TGG + chr4_1:86485846-86485865 None:intergenic 35.0%
CCTGAAGTTGAAATTGACAA+CGG + chr4_1:86486110-86486129 None:intergenic 35.0%
! CTTCAGGCTTAGATAGTTTT+TGG - chr4_1:86486123-86486142 Msa0581150:intron 35.0%
TTACTATCAAGCATGGATGA+GGG + chr4_1:86486184-86486203 None:intergenic 35.0%
TTTACTATCAAGCATGGATG+AGG + chr4_1:86486185-86486204 None:intergenic 35.0%
ACTCATTTATGTGCTGTGAT+AGG + chr4_1:86486241-86486260 None:intergenic 35.0%
TTCATTCAATCTTCTGTCGA+GGG - chr4_1:86486505-86486524 Msa0581150:intron 35.0%
AGTTACTCATAAGGAACACA+AGG + chr4_1:86486759-86486778 None:intergenic 35.0%
CACAACGGAATGATTGAAAA+AGG + chr4_1:86486943-86486962 None:intergenic 35.0%
! GTTGTGATCTTGTTTGTTAG+TGG - chr4_1:86486957-86486976 Msa0581150:CDS 35.0%
AGTCTGATTCAGATCTTCTT+TGG - chr4_1:86487091-86487110 Msa0581150:intron 35.0%
! ACCCATCTAATTAATGGACA+TGG + chr4_1:86487181-86487200 None:intergenic 35.0%
! AAGAAAGTCTGGCCTTTAAA+TGG + chr4_1:86487210-86487229 None:intergenic 35.0%
AAAAAGGTCAGAAGAAAGTC+TGG + chr4_1:86487221-86487240 None:intergenic 35.0%
! AAGCCGAATAACAACGTTTT+TGG - chr4_1:86487441-86487460 Msa0581150:five_prime_UTR 35.0%
ACGCAAAAAAGGTTGTAGTG+AGG - chr4_1:86483224-86483243 Msa0581150:three_prime_UTR 40.0%
!! GAAGAGAAGCATCAATCGTT+AGG - chr4_1:86483259-86483278 Msa0581150:three_prime_UTR 40.0%
! GAAGCATCAATCGTTAGGAT+AGG - chr4_1:86483264-86483283 Msa0581150:three_prime_UTR 40.0%
CATCAATCGTTAGGATAGGA+TGG - chr4_1:86483268-86483287 Msa0581150:three_prime_UTR 40.0%
ACGGAAGAAGAAGAAGTTTC+CGG + chr4_1:86483329-86483348 None:intergenic 40.0%
! AAGAGCGTATGTCAGAGAAA+CGG + chr4_1:86483348-86483367 None:intergenic 40.0%
CAAAGCAAAGGAGCGAATTT+GGG + chr4_1:86483392-86483411 None:intergenic 40.0%
CAAATTCGCTCCTTTGCTTT+GGG - chr4_1:86483391-86483410 Msa0581150:exon 40.0%
GGTAAGAATTGAAAGGATGG+GGG + chr4_1:86483438-86483457 None:intergenic 40.0%
GGGTAAGAATTGAAAGGATG+GGG + chr4_1:86483439-86483458 None:intergenic 40.0%
GGGGTAAGAATTGAAAGGAT+GGG + chr4_1:86483440-86483459 None:intergenic 40.0%
AGGGGTAAGAATTGAAAGGA+TGG + chr4_1:86483441-86483460 None:intergenic 40.0%
CATTTCATCATACACACGGT+TGG + chr4_1:86483550-86483569 None:intergenic 40.0%
! GAGGCATTTCATCATACACA+CGG + chr4_1:86483554-86483573 None:intergenic 40.0%
! TTTTGGTGAGGGAAGAAAAG+AGG + chr4_1:86483573-86483592 None:intergenic 40.0%
!! CATGAGAAGGATTTTGGTGA+GGG + chr4_1:86483584-86483603 None:intergenic 40.0%
!! ACATGAGAAGGATTTTGGTG+AGG + chr4_1:86483585-86483604 None:intergenic 40.0%
!!! CTGTGTTTCACCTTTTTTGG+GGG - chr4_1:86483707-86483726 Msa0581150:intron 40.0%
ACGTATTATATGTGGGGATG+GGG - chr4_1:86483948-86483967 Msa0581150:CDS 40.0%
ACCATTGAATCTAACGCAAG+TGG - chr4_1:86484044-86484063 Msa0581150:CDS 40.0%
ACCACTTGCGTTAGATTCAA+TGG + chr4_1:86484048-86484067 None:intergenic 40.0%
AGTTAGATGATCCAAATCCG+TGG - chr4_1:86484246-86484265 Msa0581150:intron 40.0%
GTTAGATGATCCAAATCCGT+GGG - chr4_1:86484247-86484266 Msa0581150:intron 40.0%
TTAGATGATCCAAATCCGTG+GGG - chr4_1:86484248-86484267 Msa0581150:intron 40.0%
!! GGCAATGCATCAGAAGTATT+TGG + chr4_1:86484287-86484306 None:intergenic 40.0%
!!! GAGTTGGTTTTTCGTTCTAG+CGG - chr4_1:86484340-86484359 Msa0581150:intron 40.0%
!!! AGTTGGTTTTTCGTTCTAGC+GGG - chr4_1:86484341-86484360 Msa0581150:intron 40.0%
TTGATTCCTAGAGTTGTTGG+AGG + chr4_1:86484397-86484416 None:intergenic 40.0%
AAACTCTCCCAACACTATTC+TGG - chr4_1:86484459-86484478 Msa0581150:intron 40.0%
CTTAGGACCAGAATAGTGTT+GGG + chr4_1:86484469-86484488 None:intergenic 40.0%
TTCAGTTCACATGCGTGTAT+AGG - chr4_1:86484561-86484580 Msa0581150:CDS 40.0%
CACATGCGTGTATAGGTAAT+AGG - chr4_1:86484568-86484587 Msa0581150:CDS 40.0%
CTGTTGTCAATGCGAAAATG+CGG - chr4_1:86484689-86484708 Msa0581150:intron 40.0%
ATTTATAGGTTCGCTTTGGC+CGG - chr4_1:86484948-86484967 Msa0581150:intron 40.0%
! TCCTGATTTTTCCGCTATAG+CGG - chr4_1:86485012-86485031 Msa0581150:intron 40.0%
AGGTGGGAATAAAGTTCATC+TGG + chr4_1:86485176-86485195 None:intergenic 40.0%
!! TTCACGTGCATTTGGTTCTA+AGG + chr4_1:86485465-86485484 None:intergenic 40.0%
ATAATGGCAAACCAAGCTCT+AGG + chr4_1:86485595-86485614 None:intergenic 40.0%
GGTTTGCCATTATGAGTCTA+CGG - chr4_1:86485602-86485621 Msa0581150:intron 40.0%
GACTAACCGTAGACTCATAA+TGG + chr4_1:86485611-86485630 None:intergenic 40.0%
TACAAGCCTGATGCAATCAA+AGG - chr4_1:86485675-86485694 Msa0581150:intron 40.0%
ATGTCACCTTTGATTGCATC+AGG + chr4_1:86485684-86485703 None:intergenic 40.0%
TGATGCAATCAAAGGTGACA+TGG - chr4_1:86485683-86485702 Msa0581150:intron 40.0%
AAGGTGACATGGATTCAATC+AGG - chr4_1:86485694-86485713 Msa0581150:intron 40.0%
TCATTCCATGAATCATGTCG+AGG - chr4_1:86485893-86485912 Msa0581150:intron 40.0%
CATTCCATGAATCATGTCGA+GGG - chr4_1:86485894-86485913 Msa0581150:intron 40.0%
AATTGACGAGTCTCAAGATC+AGG - chr4_1:86485953-86485972 Msa0581150:intron 40.0%
! TGAATTTTGCAAGGAGGAGA+CGG - chr4_1:86486075-86486094 Msa0581150:intron 40.0%
CCGTTGTCAATTTCAACTTC+AGG - chr4_1:86486107-86486126 Msa0581150:intron 40.0%
ACAAGATTCAAGCAGGGATA+AGG + chr4_1:86486271-86486290 None:intergenic 40.0%
TGAGGCAATCATCAGATAGA+AGG + chr4_1:86486450-86486469 None:intergenic 40.0%
TCTTCGGAAGAAGTTGAATG+AGG + chr4_1:86486468-86486487 None:intergenic 40.0%
CTTCATTCAATCTTCTGTCG+AGG - chr4_1:86486504-86486523 Msa0581150:intron 40.0%
ATTGTGGACTCGTTCCTATT+GGG - chr4_1:86486533-86486552 Msa0581150:intron 40.0%
ACAAATTATGGGAGGGTGAA+AGG - chr4_1:86487295-86487314 Msa0581150:five_prime_UTR 40.0%
CAAATTATGGGAGGGTGAAA+GGG - chr4_1:86487296-86487315 Msa0581150:five_prime_UTR 40.0%
! GTTGGTTTCGTACCTGTGTT+TGG + chr4_1:86483076-86483095 None:intergenic 45.0%
GAAGAAGAAGAAGTTTCCGG+TGG + chr4_1:86483326-86483345 None:intergenic 45.0%
CCAAAGCAAAGGAGCGAATT+TGG + chr4_1:86483393-86483412 None:intergenic 45.0%
CCAAATTCGCTCCTTTGCTT+TGG - chr4_1:86483390-86483409 Msa0581150:exon 45.0%
CATATACGAGTTTGCGCTGA+TGG - chr4_1:86483519-86483538 Msa0581150:intron 45.0%
ATCCTTCTCATGTTCGTACC+AGG - chr4_1:86483592-86483611 Msa0581150:intron 45.0%
TACCTGGTACGAACATGAGA+AGG + chr4_1:86483597-86483616 None:intergenic 45.0%
TTTCAGAACCCGATTGGGAA+AGG + chr4_1:86483638-86483657 None:intergenic 45.0%
CACGATTTCAGAACCCGATT+GGG + chr4_1:86483643-86483662 None:intergenic 45.0%
! CATTTTGTGGATAGGACCAC+CGG + chr4_1:86483745-86483764 None:intergenic 45.0%
TGCAAAATGCATCACGTCTG+TGG - chr4_1:86483860-86483879 Msa0581150:intron 45.0%
! TAACGCAAGTGGTTGATGCA+CGG - chr4_1:86484055-86484074 Msa0581150:CDS 45.0%
TAGATGATCCAAATCCGTGG+GGG - chr4_1:86484249-86484268 Msa0581150:intron 45.0%
ACTGATTGACCTCAAGTAGG+CGG - chr4_1:86484318-86484337 Msa0581150:intron 45.0%
TAGCTACCTCCAACAACTCT+AGG - chr4_1:86484388-86484407 Msa0581150:intron 45.0%
CCTTAGGACCAGAATAGTGT+TGG + chr4_1:86484470-86484489 None:intergenic 45.0%
CCAACACTATTCTGGTCCTA+AGG - chr4_1:86484467-86484486 Msa0581150:intron 45.0%
! ACCGCTATAGCGGAAAAATC+AGG + chr4_1:86485016-86485035 None:intergenic 45.0%
! GATTTTTCCGCTATAGCGGT+CGG - chr4_1:86485016-86485035 Msa0581150:intron 45.0%
!! ACGTGCATTTGGTTCTAAGG+TGG + chr4_1:86485462-86485481 None:intergenic 45.0%
!! TTTGTTGGTGACCTAGAGCT+TGG - chr4_1:86485581-86485600 Msa0581150:intron 45.0%
! GTCTACGGTTAGTCGATTAC+AGG - chr4_1:86485617-86485636 Msa0581150:intron 45.0%
TATAGATAGGGAGGGATACC+AGG + chr4_1:86485746-86485765 None:intergenic 45.0%
AAGACCCTCGACATGATTCA+TGG + chr4_1:86485901-86485920 None:intergenic 45.0%
GAATCATGTCGAGGGTCTTA+TGG - chr4_1:86485902-86485921 Msa0581150:intron 45.0%
! GAATTTTGCAAGGAGGAGAC+GGG - chr4_1:86486076-86486095 Msa0581150:intron 45.0%
! AATTTTGCAAGGAGGAGACG+GGG - chr4_1:86486077-86486096 Msa0581150:intron 45.0%
TCAAGCAGGGATAAGGTCTA+AGG + chr4_1:86486264-86486283 None:intergenic 45.0%
! CAGCTATGCATTCTTGCTGT+TGG - chr4_1:86486349-86486368 Msa0581150:intron 45.0%
!! ATTCTTGCTGTTGGAGCACT+TGG - chr4_1:86486358-86486377 Msa0581150:intron 45.0%
GGGAGATTTGATCACGAGAT+TGG - chr4_1:86486382-86486401 Msa0581150:intron 45.0%
TAGAAGGATAATGCGCGTGT+TGG + chr4_1:86486434-86486453 None:intergenic 45.0%
ATAGGAACGAGTCCACAATG+TGG + chr4_1:86486532-86486551 None:intergenic 45.0%
CATTGTGGACTCGTTCCTAT+TGG - chr4_1:86486532-86486551 Msa0581150:intron 45.0%
TCCTGTGGTTGTAGAACTTC+CGG + chr4_1:86486566-86486585 None:intergenic 45.0%
AATACTTACTGAGGTCCCAC+TGG + chr4_1:86486591-86486610 None:intergenic 45.0%
GAGGACACAGAGATGAGATT+TGG - chr4_1:86487018-86487037 Msa0581150:intron 45.0%
GACACAGAGATGAGATTTGG+CGG - chr4_1:86487021-86487040 Msa0581150:intron 45.0%
TACATGTTGCATACTGCACC+TGG - chr4_1:86487142-86487161 Msa0581150:CDS 45.0%
CATGGAAGATATGGAAAGCC+AGG + chr4_1:86487163-86487182 None:intergenic 45.0%
!! ATAAATAAATAATACTAATT+AGG - chr4_1:86483823-86483842 Msa0581150:intron 5.0%
ATACCGTGGTCCCAAAGCAA+AGG + chr4_1:86483404-86483423 None:intergenic 50.0%
GGGTGCAGAAAGAAATACCG+TGG + chr4_1:86483418-86483437 None:intergenic 50.0%
! ATACGAGTTTGCGCTGATGG+AGG - chr4_1:86483522-86483541 Msa0581150:intron 50.0%
GCACGATTTCAGAACCCGAT+TGG + chr4_1:86483644-86483663 None:intergenic 50.0%
AATGGCAGAGCCCCCAAAAA+AGG + chr4_1:86483720-86483739 None:intergenic 50.0%
AAACCAACTCCGCCTACTTG+AGG + chr4_1:86484330-86484349 None:intergenic 50.0%
CGCGTGTCAAAAGTGGAAAC+CGG + chr4_1:86484970-86484989 None:intergenic 50.0%
! GTCGAGGGTCTTATGGTCTT+TGG - chr4_1:86485909-86485928 Msa0581150:intron 50.0%
! TATGGTCTTTGGCTTCCTGC+AGG - chr4_1:86485920-86485939 Msa0581150:intron 50.0%
! ATGGTCTTTGGCTTCCTGCA+GGG - chr4_1:86485921-86485940 Msa0581150:intron 50.0%
CAATTATCTTCGTCCCCTGC+AGG + chr4_1:86485938-86485957 None:intergenic 50.0%
! ATTTTGCAAGGAGGAGACGG+GGG - chr4_1:86486078-86486097 Msa0581150:intron 50.0%
! TTGCTGTTGGAGCACTTGGT+GGG - chr4_1:86486362-86486381 Msa0581150:intron 50.0%
GTTCCTATTGGGATGCCATC+CGG - chr4_1:86486544-86486563 Msa0581150:intron 50.0%
GTGGTTGTAGAACTTCCGGA+TGG + chr4_1:86486562-86486581 None:intergenic 50.0%
TCCGGAAGTTCTACAACCAC+AGG - chr4_1:86486562-86486581 Msa0581150:intron 50.0%
TACAACCACAGGACTCCAGT+GGG - chr4_1:86486573-86486592 Msa0581150:intron 50.0%
!! GCTCCTTTGCTTTGGGACCA+CGG - chr4_1:86483398-86483417 Msa0581150:CDS 55.0%
TGGATAGGACCACCGGTGAA+TGG + chr4_1:86483738-86483757 None:intergenic 55.0%
TGACCTCAAGTAGGCGGAGT+TGG - chr4_1:86484324-86484343 Msa0581150:intron 55.0%
GTCAATGCGAAAATGCGGCG+TGG - chr4_1:86484694-86484713 Msa0581150:intron 55.0%
AAAATCAGGACCACCGCACC+AGG + chr4_1:86485002-86485021 None:intergenic 55.0%
! TGGTCTTTGGCTTCCTGCAG+GGG - chr4_1:86485922-86485941 Msa0581150:intron 55.0%
!! CTTGCTGTTGGAGCACTTGG+TGG - chr4_1:86486361-86486380 Msa0581150:intron 55.0%
TCTGTCGAGGGTCCACATTG+TGG - chr4_1:86486517-86486536 Msa0581150:intron 55.0%
CTTCCGGATGGCATCCCAAT+AGG + chr4_1:86486550-86486569 None:intergenic 55.0%
CTACAACCACAGGACTCCAG+TGG - chr4_1:86486572-86486591 Msa0581150:intron 55.0%
TTGGGGGCTCTGCCATTCAC+CGG - chr4_1:86483723-86483742 Msa0581150:intron 60.0%
TGTGTGTGCCCCCACGGATT+TGG + chr4_1:86484260-86484279 None:intergenic 60.0%
GGATCTTGTGTGTGCCCCCA+CGG + chr4_1:86484266-86484285 None:intergenic 60.0%
TGCGGCGTGGCCAACTCAAT+TGG - chr4_1:86484707-86484726 Msa0581150:intron 60.0%
CGTGGCCAACTCAATTGGCG+CGG - chr4_1:86484712-86484731 Msa0581150:intron 60.0%
CCAACTCAATTGGCGCGGTG+CGG - chr4_1:86484717-86484736 Msa0581150:intron 60.0%
CAACTCAATTGGCGCGGTGC+GGG - chr4_1:86484718-86484737 Msa0581150:intron 60.0%
GCGCGTAGCAGGCGCTATTT+CGG - chr4_1:86484747-86484766 Msa0581150:intron 60.0%
! CGTAGCAGGCGCTATTTCGG+TGG - chr4_1:86484750-86484769 Msa0581150:intron 60.0%
!! ACTTTTGACACGCGCCGACG+CGG - chr4_1:86484976-86484995 Msa0581150:intron 60.0%
TTCCGCTATAGCGGTCGGTG+CGG - chr4_1:86485021-86485040 Msa0581150:intron 60.0%
CCGCACCGCGCCAATTGAGT+TGG + chr4_1:86484720-86484739 None:intergenic 65.0%
! GCGTCGGCGCGTGTCAAAAG+TGG + chr4_1:86484977-86484996 None:intergenic 65.0%
GAGGTCCCACTGGAGTCCTG+TGG + chr4_1:86486581-86486600 None:intergenic 65.0%
GGGGCTCTGCCATTCACCGG+TGG - chr4_1:86483726-86483745 Msa0581150:intron 70.0%
CAATTGGCGCGGTGCGGGAG+CGG - chr4_1:86484723-86484742 Msa0581150:intron 70.0%
AATTGGCGCGGTGCGGGAGC+GGG - chr4_1:86484724-86484743 Msa0581150:intron 70.0%
! GGCCGCACCGACCGCTATAG+CGG + chr4_1:86485026-86485045 None:intergenic 70.0%
ATTGGCGCGGTGCGGGAGCG+GGG - chr4_1:86484725-86484744 Msa0581150:intron 75.0%
ACCACCGCACCAGGCCGCGT+CGG + chr4_1:86484993-86485012 None:intergenic 75.0%
!! TGACACGCGCCGACGCGGCC+TGG - chr4_1:86484981-86485000 Msa0581150:intron 80.0%
! GCGGGAGCGGGGCGCGTAGC+AGG - chr4_1:86484736-86484755 Msa0581150:intron 85.0%
!! CGCGCCGACGCGGCCTGGTG+CGG - chr4_1:86484986-86485005 Msa0581150:intron 85.0%
! GCCGACGCGGCCTGGTGCGG+TGG - chr4_1:86484989-86485008 Msa0581150:intron 85.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 86483061 86487469 86483061 ID=Msa0581150;Name=Msa0581150
chr4_1 mRNA 86483061 86487469 86483061 ID=Msa0581150-mRNA-1;Parent=Msa0581150;Name=Msa0581150-mRNA-1;_AED=0.02;_eAED=0.02;_QI=226|1|1|1|1|1|6|332|257
chr4_1 exon 86483061 86483511 86483061 ID=Msa0581150-mRNA-1:exon:31957;Parent=Msa0581150-mRNA-1
chr4_1 exon 86483929 86484178 86483929 ID=Msa0581150-mRNA-1:exon:31956;Parent=Msa0581150-mRNA-1
chr4_1 exon 86484487 86484588 86484487 ID=Msa0581150-mRNA-1:exon:31955;Parent=Msa0581150-mRNA-1
chr4_1 exon 86484784 86484856 86484784 ID=Msa0581150-mRNA-1:exon:31954;Parent=Msa0581150-mRNA-1
chr4_1 exon 86486917 86487013 86486917 ID=Msa0581150-mRNA-1:exon:31953;Parent=Msa0581150-mRNA-1
chr4_1 exon 86487111 86487469 86487111 ID=Msa0581150-mRNA-1:exon:31952;Parent=Msa0581150-mRNA-1
chr4_1 five_prime_UTR 86487244 86487469 86487244 ID=Msa0581150-mRNA-1:five_prime_utr;Parent=Msa0581150-mRNA-1
chr4_1 CDS 86487111 86487243 86487111 ID=Msa0581150-mRNA-1:cds;Parent=Msa0581150-mRNA-1
chr4_1 CDS 86486917 86487013 86486917 ID=Msa0581150-mRNA-1:cds;Parent=Msa0581150-mRNA-1
chr4_1 CDS 86484784 86484856 86484784 ID=Msa0581150-mRNA-1:cds;Parent=Msa0581150-mRNA-1
chr4_1 CDS 86484487 86484588 86484487 ID=Msa0581150-mRNA-1:cds;Parent=Msa0581150-mRNA-1
chr4_1 CDS 86483929 86484178 86483929 ID=Msa0581150-mRNA-1:cds;Parent=Msa0581150-mRNA-1
chr4_1 CDS 86483393 86483511 86483393 ID=Msa0581150-mRNA-1:cds;Parent=Msa0581150-mRNA-1
chr4_1 three_prime_UTR 86483061 86483392 86483061 ID=Msa0581150-mRNA-1:three_prime_utr;Parent=Msa0581150-mRNA-1
Gene Sequence

>Msa0581150

ATGGAGTTGATGTGTCATTGTTCAACTTTTCTTCTTCCACCGGAAACTTCTTCTTCTTCCGTTTCTCTGACATACGCTCTTGTTATTCTCAATCAAAATCTTCCCAAATTCGCTCCTTTGCTTTGGGACCACGCTCATATACGAGTTTGCGCTGATGGAGGTGCCAACCGTGTGTATGATGAAATGCCTCTTTTCTTCCCTCACCAAAATCCTTCTCATGTTCGTACCAGGTACAAGCCTGATGCAATCAAAGGTGACATGGATTCAATCAGGACAGAAGTACTTGATTTCTATGCAAACCTGGGGACGAAGATAATTGACGAGTCTCAAGATCAGGACACCACAGATTTACACAAATGTGTTGCATACATTCGTGACCTTATACCAAATACTGATAAATCAGAGCTATGCATTCTTGCTGTTGGAGCACTTGGTGGGAGATTTGATCACGAGATTGGAAATATTAATGTGCTATGTCGATTCTCCAACACGCGCATTATCCTTCTATCTGATGATTGCCTCATTCAACTTCTTCCGAAGAATTACTCGCATAAGATCTTCATTCAATCTTCTGTCGAGGGTCCACATTGTGGACTCGTTCCTATTGGGATGCCATCCGGAAGTTCTACAACCACAGGACTCCAGTGGGACCTCAAGGACACAGAGATGAGATTTGGCGGTTTAGTAAGCACATCAAATATTGTAAAAGGAGATATAGTAACAGTACAGTCTGATTCAGATCTTCTTTGGACAATTTCTATCAAGAAGCTCTAG
Protein sequence

>Msa0581150

MELMCHCSTFLLPPETSSSSVSLTYALVILNQNLPKFAPLLWDHAHIRVCADGGANRVYDEMPLFFPHQNPSHVRTRYKPDAIKGDMDSIRTEVLDFYANLGTKIIDESQDQDTTDLHKCVAYIRDLIPNTDKSELCILAVGALGGRFDHEIGNINVLCRFSNTRIILLSDDCLIQLLPKNYSHKIFIQSSVEGPHCGLVPIGMPSGSSTTTGLQWDLKDTEMRFGGLVSTSNIVKGDIVTVQSDSDLLWTISIKKL*