Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1383790 | XP_003603769.1 | 96.217 | 608 | 23 | 0 | 1 | 608 | 1 | 608 | 0.0 | 1207 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1383790 | sp|Q9SA91|PSI2_ARATH | 47.994 | 623 | 294 | 9 | 1 | 606 | 1 | 610 | 0.0 | 531 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1383790 | G7J592 | 96.217 | 608 | 23 | 0 | 1 | 608 | 1 | 608 | 0.0 | 1207 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030800 | Msa1383790 | 0.815841 | 7.518430e-52 | -8.615850e-47 |
| Msa0035790 | Msa1383790 | 0.828526 | 8.559889e-55 | -8.615850e-47 |
| Msa0046680 | Msa1383790 | 0.845463 | 3.997378e-59 | -8.615850e-47 |
| Msa0051480 | Msa1383790 | 0.825548 | 4.415556e-54 | -8.615850e-47 |
| Msa0051620 | Msa1383790 | 0.801366 | 9.314932e-49 | -8.615850e-47 |
| Msa0051730 | Msa1383790 | 0.809162 | 2.168390e-50 | -8.615850e-47 |
| Msa0076640 | Msa1383790 | 0.817441 | 3.291955e-52 | -8.615850e-47 |
| Msa0078210 | Msa1383790 | 0.810532 | 1.099830e-50 | -8.615850e-47 |
| Msa0083890 | Msa1383790 | 0.819988 | 8.695293e-53 | -8.615850e-47 |
| Msa1344870 | Msa1383790 | -0.828695 | 7.793968e-55 | -8.615850e-47 |
| Msa1346010 | Msa1383790 | 0.974461 | 3.391717e-138 | -8.615850e-47 |
| Msa1349830 | Msa1383790 | 0.810823 | 9.517649e-51 | -8.615850e-47 |
| Msa1377050 | Msa1383790 | 0.823480 | 1.354456e-53 | -8.615850e-47 |
| Msa1383790 | Msa1387610 | 0.836811 | 7.517034e-57 | -8.615850e-47 |
| Msa1383790 | Msa1396160 | 0.828477 | 8.796889e-55 | -8.615850e-47 |
| Msa1383790 | Msa1398120 | 0.806736 | 7.117408e-50 | -8.615850e-47 |
| Msa1383790 | Msa1401110 | 0.800006 | 1.764576e-48 | -8.615850e-47 |
| Msa1383790 | Msa1414340 | 0.805364 | 1.383198e-49 | -8.615850e-47 |
| Msa1383790 | Msa1438160 | 0.824006 | 1.019651e-53 | -8.615850e-47 |
| Msa1383790 | Msa1449470 | 0.833932 | 4.014877e-56 | -8.615850e-47 |
| Msa1383790 | Msa1453600 | 0.870219 | 1.721163e-66 | -8.615850e-47 |
| Msa1383790 | Msa1459920 | 0.810928 | 9.031356e-51 | -8.615850e-47 |
| Msa1383790 | Msa1459930 | 0.845568 | 3.744300e-59 | -8.615850e-47 |
| Msa0652610 | Msa1383790 | 0.803655 | 3.143231e-49 | -8.615850e-47 |
| Msa0744550 | Msa1383790 | 0.824736 | 6.867511e-54 | -8.615850e-47 |
| Msa0744560 | Msa1383790 | 0.837090 | 6.380297e-57 | -8.615850e-47 |
| Msa0746340 | Msa1383790 | 0.803149 | 4.000231e-49 | -8.615850e-47 |
| Msa0826360 | Msa1383790 | 0.853608 | 2.135779e-61 | -8.615850e-47 |
| Msa0826370 | Msa1383790 | 0.830376 | 3.041797e-55 | -8.615850e-47 |
| Msa0826450 | Msa1383790 | 0.815617 | 8.434073e-52 | -8.615850e-47 |
| Msa0143640 | Msa1383790 | 0.814459 | 1.524265e-51 | -8.615850e-47 |
| Msa0146200 | Msa1383790 | 0.830487 | 2.856513e-55 | -8.615850e-47 |
| Msa0187820 | Msa1383790 | -0.814943 | 1.190858e-51 | -8.615850e-47 |
| Msa1236740 | Msa1383790 | -0.830506 | 2.826633e-55 | -8.615850e-47 |
| Msa1256600 | Msa1383790 | 0.800186 | 1.621982e-48 | -8.615850e-47 |
| Msa1263500 | Msa1383790 | 0.829414 | 5.218241e-55 | -8.615850e-47 |
| Msa1299480 | Msa1383790 | 0.814562 | 1.446054e-51 | -8.615850e-47 |
| Msa1309050 | Msa1383790 | 0.813547 | 2.421564e-51 | -8.615850e-47 |
| Msa1333700 | Msa1383790 | 0.818342 | 2.060548e-52 | -8.615850e-47 |
| Msa0385320 | Msa1383790 | 0.949953 | 4.463304e-108 | -8.615850e-47 |
| Msa0402800 | Msa1383790 | 0.800414 | 1.457443e-48 | -8.615850e-47 |
| Msa0421080 | Msa1383790 | 0.817922 | 2.565233e-52 | -8.615850e-47 |
| Msa0438070 | Msa1383790 | 0.825704 | 4.054752e-54 | -8.615850e-47 |
| Msa0466850 | Msa1383790 | 0.846099 | 2.685959e-59 | -8.615850e-47 |
| Msa0480540 | Msa1383790 | 0.818083 | 2.358431e-52 | -8.615850e-47 |
| Msa0480550 | Msa1383790 | 0.840563 | 8.066730e-58 | -8.615850e-47 |
| Msa0481740 | Msa1383790 | 0.805251 | 1.460613e-49 | -8.615850e-47 |
| Msa0481770 | Msa1383790 | 0.871253 | 7.865785e-67 | -8.615850e-47 |
| Msa1080650 | Msa1383790 | 0.809887 | 1.514812e-50 | -8.615850e-47 |
| Msa0246140 | Msa1383790 | 0.807277 | 5.468578e-50 | -8.615850e-47 |
| Msa0267900 | Msa1383790 | 0.815235 | 1.025627e-51 | -8.615850e-47 |
| Msa0291920 | Msa1383790 | 0.816607 | 5.068575e-52 | -8.615850e-47 |
| Msa0332360 | Msa1383790 | 0.801736 | 7.822484e-49 | -8.615850e-47 |
| Msa1122920 | Msa1383790 | -0.819552 | 1.094078e-52 | -8.615850e-47 |
| Msa1122930 | Msa1383790 | -0.802300 | 5.990916e-49 | -8.615850e-47 |
| Msa1126440 | Msa1383790 | 0.804934 | 1.701930e-49 | -8.615850e-47 |
| Msa1158610 | Msa1383790 | 0.825315 | 5.013568e-54 | -8.615850e-47 |
| Msa1165980 | Msa1383790 | 0.807887 | 4.057159e-50 | -8.615850e-47 |
| Msa1177360 | Msa1383790 | -0.826546 | 2.557105e-54 | -8.615850e-47 |
| Msa1183750 | Msa1383790 | 0.821467 | 3.975901e-53 | -8.615850e-47 |
| Msa1211610 | Msa1383790 | 0.811797 | 5.849179e-51 | -8.615850e-47 |
| Msa1223560 | Msa1383790 | 0.834525 | 2.850581e-56 | -8.615850e-47 |
| Msa1224510 | Msa1383790 | 0.807460 | 5.000227e-50 | -8.615850e-47 |
| Msa0513670 | Msa1383790 | 0.847485 | 1.122668e-59 | -8.615850e-47 |
| Msa0523080 | Msa1383790 | 0.892140 | 2.088097e-74 | -8.615850e-47 |
| Msa0568110 | Msa1383790 | 0.823906 | 1.076250e-53 | -8.615850e-47 |
| Msa0570460 | Msa1383790 | 0.841807 | 3.796891e-58 | -8.615850e-47 |
| Msa0580840 | Msa1383790 | 0.811382 | 7.200109e-51 | -8.615850e-47 |
| Msa0581150 | Msa1383790 | 0.809700 | 1.662340e-50 | -8.615850e-47 |
| Msa0865810 | Msa1383790 | 0.819088 | 1.395479e-52 | -8.615850e-47 |
| Msa0865820 | Msa1383790 | 0.804902 | 1.728396e-49 | -8.615850e-47 |
| Msa0865830 | Msa1383790 | 0.853218 | 2.762905e-61 | -8.615850e-47 |
| Msa0945320 | Msa1383790 | 0.805938 | 1.048379e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1383790 | MtrunA17_Chr3g0142751 | 96.217 | 608 | 23 | 0 | 1 | 608 | 1 | 608 | 0.0 | 1207 |
| Msa1383790 | MtrunA17_Chr1g0156671 | 58.347 | 617 | 223 | 9 | 1 | 606 | 1 | 594 | 0.0 | 686 |
| Msa1383790 | MtrunA17_Chr1g0200831 | 51.845 | 515 | 229 | 6 | 76 | 584 | 112 | 613 | 2.34e-171 | 502 |
| Msa1383790 | MtrunA17_Chr8g0385111 | 43.609 | 532 | 268 | 7 | 39 | 560 | 69 | 578 | 5.59e-129 | 393 |
| Msa1383790 | MtrunA17_Chr3g0130981 | 49.377 | 401 | 194 | 5 | 76 | 473 | 94 | 488 | 7.08e-123 | 376 |
| Msa1383790 | MtrunA17_Chr1g0188181 | 24.194 | 434 | 248 | 7 | 120 | 483 | 154 | 576 | 6.25e-28 | 118 |
| Msa1383790 | MtrunA17_Chr1g0168081 | 32.057 | 209 | 132 | 3 | 122 | 327 | 43 | 244 | 8.85e-19 | 90.1 |
| Msa1383790 | MtrunA17_Chr1g0168081 | 31.646 | 158 | 93 | 3 | 340 | 493 | 437 | 583 | 1.25e-14 | 77.0 |
| Msa1383790 | MtrunA17_Chr1g0179471 | 34.014 | 147 | 83 | 3 | 340 | 484 | 384 | 518 | 1.66e-16 | 82.8 |
| Msa1383790 | MtrunA17_Chr1g0179471 | 26.887 | 212 | 146 | 3 | 121 | 328 | 28 | 234 | 7.98e-11 | 64.7 |
| Msa1383790 | MtrunA17_Chr1g0186481 | 30.189 | 212 | 135 | 4 | 122 | 328 | 46 | 249 | 2.33e-16 | 82.4 |
| Msa1383790 | MtrunA17_Chr1g0186481 | 33.526 | 173 | 98 | 5 | 325 | 493 | 394 | 553 | 2.53e-15 | 79.3 |
| Msa1383790 | MtrunA17_Chr6g0475791 | 36.364 | 165 | 87 | 6 | 326 | 483 | 301 | 454 | 1.50e-15 | 79.7 |
| Msa1383790 | MtrunA17_Chr6g0475791 | 25.446 | 224 | 153 | 4 | 120 | 336 | 34 | 250 | 1.22e-12 | 70.5 |
| Msa1383790 | MtrunA17_Chr1g0198031 | 32.237 | 152 | 89 | 3 | 341 | 488 | 433 | 574 | 4.66e-14 | 75.5 |
| Msa1383790 | MtrunA17_Chr1g0198031 | 25.701 | 214 | 151 | 3 | 117 | 327 | 21 | 229 | 1.02e-13 | 74.3 |
| Msa1383790 | MtrunA17_Chr7g0265631 | 27.442 | 215 | 141 | 5 | 122 | 329 | 29 | 235 | 2.81e-13 | 72.8 |
| Msa1383790 | MtrunA17_Chr7g0265631 | 31.544 | 149 | 86 | 2 | 343 | 485 | 396 | 534 | 1.36e-12 | 70.5 |
| Msa1383790 | MtrunA17_Chr3g0126591 | 32.237 | 152 | 86 | 3 | 340 | 484 | 423 | 564 | 8.32e-13 | 71.2 |
| Msa1383790 | MtrunA17_Chr4g0009451 | 24.766 | 214 | 155 | 2 | 122 | 329 | 19 | 232 | 5.07e-12 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1383790 | AT1G30755.5 | 47.994 | 623 | 294 | 9 | 1 | 606 | 1 | 610 | 0.0 | 531 |
| Msa1383790 | AT1G30755.1 | 47.994 | 623 | 294 | 9 | 1 | 606 | 1 | 610 | 0.0 | 531 |
| Msa1383790 | AT1G30755.6 | 47.994 | 623 | 294 | 9 | 1 | 606 | 1 | 610 | 0.0 | 531 |
| Msa1383790 | AT1G34320.1 | 49.615 | 520 | 235 | 9 | 76 | 581 | 105 | 611 | 1.14e-160 | 475 |
| Msa1383790 | AT1G34320.2 | 49.615 | 520 | 235 | 9 | 76 | 581 | 105 | 611 | 1.14e-160 | 475 |
| Msa1383790 | AT1G30755.3 | 52.759 | 453 | 202 | 4 | 1 | 441 | 1 | 453 | 2.82e-155 | 454 |
| Msa1383790 | AT1G30755.4 | 51.481 | 439 | 201 | 4 | 1 | 427 | 1 | 439 | 1.63e-142 | 421 |
| Msa1383790 | AT1G30755.2 | 51.481 | 439 | 201 | 4 | 1 | 427 | 1 | 439 | 1.63e-142 | 421 |
| Msa1383790 | AT5G08660.3 | 45.951 | 494 | 237 | 10 | 76 | 560 | 103 | 575 | 1.04e-128 | 392 |
| Msa1383790 | AT5G08660.1 | 45.951 | 494 | 237 | 10 | 76 | 560 | 103 | 575 | 1.04e-128 | 392 |
| Msa1383790 | AT5G08660.4 | 45.951 | 494 | 237 | 10 | 76 | 560 | 103 | 575 | 1.04e-128 | 392 |
| Msa1383790 | AT5G08660.2 | 51.882 | 372 | 169 | 4 | 76 | 441 | 103 | 470 | 2.87e-112 | 344 |
| Msa1383790 | AT5G51670.1 | 24.703 | 421 | 252 | 8 | 122 | 483 | 37 | 451 | 8.14e-26 | 111 |
| Msa1383790 | AT5G51670.2 | 24.703 | 421 | 252 | 8 | 122 | 483 | 37 | 451 | 8.14e-26 | 111 |
| Msa1383790 | AT3G23160.1 | 28.972 | 214 | 139 | 4 | 122 | 330 | 43 | 248 | 1.38e-16 | 83.6 |
| Msa1383790 | AT3G23160.1 | 32.692 | 156 | 89 | 4 | 343 | 493 | 361 | 505 | 1.67e-14 | 77.0 |
| Msa1383790 | AT5G04550.1 | 30.921 | 152 | 88 | 2 | 339 | 483 | 429 | 570 | 2.06e-12 | 70.5 |
| Msa1383790 | AT5G04550.1 | 28.372 | 215 | 133 | 5 | 122 | 327 | 26 | 228 | 3.41e-12 | 69.7 |
| Msa1383790 | AT5G04550.2 | 30.921 | 152 | 88 | 2 | 339 | 483 | 429 | 570 | 2.06e-12 | 70.5 |
| Msa1383790 | AT5G04550.2 | 28.372 | 215 | 133 | 5 | 122 | 327 | 26 | 228 | 3.41e-12 | 69.7 |
Find 170 sgRNAs with CRISPR-Local
Find 449 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGGAGGTTATACCTCTTTC+TGG | 0.206036 | tig0020612:+79289 | None:intergenic |
| CACTAGAAAGGGCTCTTTAT+TGG | 0.209748 | tig0020612:-82246 | Msa1383790:CDS |
| TATAATGTGTCCCTCGTATT+TGG | 0.226029 | tig0020612:+79372 | None:intergenic |
| GCGAATTGGGTTGCTTTCTT+TGG | 0.239633 | tig0020612:+78691 | None:intergenic |
| ACTTGGAGGGATGAACAATT+TGG | 0.261598 | tig0020612:-83640 | Msa1383790:CDS |
| CTGTTTGTTCGGCGGGGATG+GGG | 0.262647 | tig0020612:-83680 | Msa1383790:CDS |
| AGTATGTTGATTATTATAAA+AGG | 0.289180 | tig0020612:+83757 | None:intergenic |
| AGCTGTTTGTTCGGCGGGGA+TGG | 0.294101 | tig0020612:-83682 | Msa1383790:CDS |
| GCTGTTTGTTCGGCGGGGAT+GGG | 0.295470 | tig0020612:-83681 | Msa1383790:CDS |
| TGTTTACATTATTGAATTGT+TGG | 0.296282 | tig0020612:-78630 | Msa1383790:CDS |
| CTTGGAGGGATGAACAATTT+GGG | 0.298151 | tig0020612:-83639 | Msa1383790:CDS |
| ATATACCTCCTCTAAATATC+TGG | 0.305237 | tig0020612:+80652 | None:intergenic |
| TTCACCTGATAAGGAGTTCT+TGG | 0.308165 | tig0020612:-78303 | Msa1383790:CDS |
| AAGCAAAACAAGCTAGAAAA+TGG | 0.311419 | tig0020612:-83534 | Msa1383790:CDS |
| ATGAACAATTTGGGGTTCTC+TGG | 0.312989 | tig0020612:-83630 | Msa1383790:CDS |
| AGAAAGTGAGTGAAATAAAA+TGG | 0.316068 | tig0020612:+82067 | None:intergenic |
| TATTGGGTAAAGCTAGCTAT+AGG | 0.317617 | tig0020612:-82229 | Msa1383790:CDS |
| TTTGGTCTTGAGAGGGTGCC+TGG | 0.318517 | tig0020612:+78337 | None:intergenic |
| CTATCCACTTCCGCTTCAAT+TGG | 0.319467 | tig0020612:-83492 | Msa1383790:CDS |
| TAAAATCATGAGTTTATATA+TGG | 0.322145 | tig0020612:+78086 | None:intergenic |
| TCACGGGAAGTAGTTAGATT+TGG | 0.323364 | tig0020612:-81826 | Msa1383790:CDS |
| AACATCTATCTTCTGCTTAT+CGG | 0.328434 | tig0020612:+78649 | None:intergenic |
| CCACCACAACTATAACGTTT+TGG | 0.340346 | tig0020612:-78261 | Msa1383790:CDS |
| TCTTTGGTCCAGATATTTAG+AGG | 0.343093 | tig0020612:-80660 | Msa1383790:CDS |
| ACTAGAAAGGGCTCTTTATT+GGG | 0.349692 | tig0020612:-82245 | Msa1383790:CDS |
| GTGAAATAAAATGGCTCCTT+TGG | 0.349733 | tig0020612:+82076 | None:intergenic |
| AGGGAAGAAAATATCAATAT+TGG | 0.349870 | tig0020612:-82123 | Msa1383790:CDS |
| GTTCATAAGCACTTAATTCA+TGG | 0.354686 | tig0020612:+81206 | None:intergenic |
| TAAAGTGTCTGGAGGCGAAT+TGG | 0.362664 | tig0020612:+78677 | None:intergenic |
| AGCAAAGGAGAATTATGAAA+TGG | 0.363651 | tig0020612:+83783 | None:intergenic |
| AGGTGAACTCCCAGCACTTT+TGG | 0.367675 | tig0020612:+78319 | None:intergenic |
| CAGATTAGACTTGGATGTCT+TGG | 0.372829 | tig0020612:-81622 | Msa1383790:CDS |
| TCTAATAATATCCTATCTTC+TGG | 0.378873 | tig0020612:+78434 | None:intergenic |
| GTACCCAAGAACTCCTTATC+AGG | 0.382837 | tig0020612:+78299 | None:intergenic |
| GTATTTGGAGGAAGGGAGGC+TGG | 0.382938 | tig0020612:+79387 | None:intergenic |
| CCAGCTTCACCTAGTCTTTG+AGG | 0.388523 | tig0020612:+79550 | None:intergenic |
| CGCATCTTAGACTGAAGTTC+AGG | 0.389412 | tig0020612:+78515 | None:intergenic |
| AACAGGGCTCATCAAGGCTT+TGG | 0.390105 | tig0020612:-78898 | Msa1383790:intron |
| TACCTCTTTCTGGATAGAAA+TGG | 0.393069 | tig0020612:+79299 | None:intergenic |
| ACAATTAGTCTCAACAGATA+TGG | 0.394875 | tig0020612:-81991 | Msa1383790:CDS |
| CCACCACTGGTGTTTAACTT+TGG | 0.408588 | tig0020612:+82170 | None:intergenic |
| CTTTGGATGGGTTGGTGAAT+GGG | 0.411171 | tig0020612:-78881 | Msa1383790:CDS |
| GCTTTGGATGGGTTGGTGAA+TGG | 0.411360 | tig0020612:-78882 | Msa1383790:CDS |
| CGTGAGTTCCTTGGAAATCA+TGG | 0.412240 | tig0020612:-80385 | Msa1383790:intron |
| ATTGGGTAAAGCTAGCTATA+GGG | 0.415408 | tig0020612:-82228 | Msa1383790:CDS |
| ACGAATTGCTTGATGTATAT+AGG | 0.416690 | tig0020612:+80405 | None:intergenic |
| TGCTGGGAGTTCACCTGATA+AGG | 0.417744 | tig0020612:-78312 | Msa1383790:CDS |
| ATGGGAGCTGTTTGTTCGGC+GGG | 0.424396 | tig0020612:-83687 | Msa1383790:CDS |
| AGGGCACTCTTAATACTGTT+TGG | 0.425261 | tig0020612:+79339 | None:intergenic |
| TTGGATATTATGGATGGCTT+AGG | 0.426323 | tig0020612:-78242 | Msa1383790:CDS |
| CAAGCAATTCGTGAGTTCCT+TGG | 0.428629 | tig0020612:-80394 | Msa1383790:CDS |
| ACCAGTGGTGGGTTTGTCTC+TGG | 0.431852 | tig0020612:-82158 | Msa1383790:CDS |
| TATCCACTTCCGCTTCAATT+GGG | 0.432097 | tig0020612:-83491 | Msa1383790:CDS |
| CTCTGGGAAGGTTCTTAAGA+AGG | 0.438542 | tig0020612:-83613 | Msa1383790:CDS |
| AGACTGAAGTTCAGGTCTCT+TGG | 0.440141 | tig0020612:+78523 | None:intergenic |
| AATTTCAAGGAGGAGGAGCC+CGG | 0.440803 | tig0020612:-78405 | Msa1383790:CDS |
| TTGATTGTATTTGCCGCAAA+TGG | 0.442663 | tig0020612:+79072 | None:intergenic |
| AGAAGATAGGATATTATTAG+AGG | 0.443661 | tig0020612:-78432 | Msa1383790:CDS |
| AGATTAGACTTGGATGTCTT+GGG | 0.448582 | tig0020612:-81621 | Msa1383790:CDS |
| CATCAAGGCTTTGGATGGGT+TGG | 0.449569 | tig0020612:-78889 | Msa1383790:CDS |
| GCAAAGGAGAATTATGAAAT+GGG | 0.450142 | tig0020612:+83784 | None:intergenic |
| AAAGTGTCTGGAGGCGAATT+GGG | 0.454666 | tig0020612:+78678 | None:intergenic |
| GAGAGCAATGCAGAAGAACT+TGG | 0.459267 | tig0020612:-83657 | Msa1383790:CDS |
| GACCGTGTGGGCATTGCCAT+TGG | 0.460170 | tig0020612:+78554 | None:intergenic |
| TATTAGAGGAGGTAATTTCA+AGG | 0.460679 | tig0020612:-78418 | Msa1383790:CDS |
| TGAACAATTTGGGGTTCTCT+GGG | 0.462361 | tig0020612:-83629 | Msa1383790:CDS |
| TGTTTGTTCGGCGGGGATGG+GGG | 0.464288 | tig0020612:-83679 | Msa1383790:CDS |
| ACATTATTGAATTGTTGGTA+TGG | 0.467171 | tig0020612:-78625 | Msa1383790:CDS |
| CTCAACTTTCTCCAGAAGAT+AGG | 0.474373 | tig0020612:-78445 | Msa1383790:CDS |
| TCACCTGATAAGGAGTTCTT+GGG | 0.476603 | tig0020612:-78302 | Msa1383790:CDS |
| CTTATCATAGGTCACTAGAA+AGG | 0.481697 | tig0020612:-82258 | Msa1383790:intron |
| TACCAAGAATCTTCAAAAGA+AGG | 0.482492 | tig0020612:+78177 | None:intergenic |
| GGGCTCATCAAGGCTTTGGA+TGG | 0.482723 | tig0020612:-78894 | Msa1383790:CDS |
| TTCCCCAATTGAAGCGGAAG+TGG | 0.483971 | tig0020612:+83488 | None:intergenic |
| GACAGAAACAACAAGCCATT+GGG | 0.486617 | tig0020612:-78470 | Msa1383790:CDS |
| CCTCTCAAGACCAAAAGTGC+TGG | 0.487668 | tig0020612:-78329 | Msa1383790:CDS |
| CTCTCAAGACCAAAAGTGCT+GGG | 0.492885 | tig0020612:-78328 | Msa1383790:CDS |
| TATCGGCGTAGTAAAGTGTC+TGG | 0.492972 | tig0020612:+78666 | None:intergenic |
| ACCTTTCAGAGGAAGATTCA+AGG | 0.494840 | tig0020612:+81141 | None:intergenic |
| CAATTTGGGGTTCTCTGGGA+AGG | 0.497243 | tig0020612:-83625 | Msa1383790:CDS |
| TGACATTGCAGTAACGACTT+TGG | 0.497519 | tig0020612:-78725 | Msa1383790:intron |
| GGAGAATTATGAAATGGGTT+GGG | 0.497541 | tig0020612:+83789 | None:intergenic |
| AGGAGAATTATGAAATGGGT+TGG | 0.498869 | tig0020612:+83788 | None:intergenic |
| TTATCATAGGTCACTAGAAA+GGG | 0.499151 | tig0020612:-82257 | Msa1383790:intron |
| AACGTTATAGTTGTGGTGGT+TGG | 0.507765 | tig0020612:+78265 | None:intergenic |
| AGGAGGTAATTTCAAGGAGG+AGG | 0.509239 | tig0020612:-78412 | Msa1383790:CDS |
| GATGTAGGTTGTGCCATTGT+GGG | 0.511411 | tig0020612:+81788 | None:intergenic |
| CGATGTAGGTTGTGCCATTG+TGG | 0.512886 | tig0020612:+81787 | None:intergenic |
| ATCCATTTCTATCCAGAAAG+AGG | 0.516436 | tig0020612:-79301 | Msa1383790:intron |
| AGACAGAAACAACAAGCCAT+TGG | 0.517679 | tig0020612:-78471 | Msa1383790:CDS |
| CCTCAAAGACTAGGTGAAGC+TGG | 0.518624 | tig0020612:-79550 | Msa1383790:CDS |
| ACGAGGGACACATTATATCA+AGG | 0.522467 | tig0020612:-79366 | Msa1383790:CDS |
| AATGGATGGTGAATAATTGT+CGG | 0.528573 | tig0020612:+78138 | None:intergenic |
| ATGAAATATCAGATTAGACT+TGG | 0.530537 | tig0020612:-81631 | Msa1383790:intron |
| GGCTCATCAAGGCTTTGGAT+GGG | 0.531203 | tig0020612:-78893 | Msa1383790:CDS |
| CATTCAGTTCCTCAAGAAGG+AGG | 0.532398 | tig0020612:-82036 | Msa1383790:CDS |
| AATTTAAAACCTCCTTCTTG+AGG | 0.532695 | tig0020612:+82027 | None:intergenic |
| GTGGAAGTTCTTGATACACT+TGG | 0.535597 | tig0020612:-82203 | Msa1383790:CDS |
| TTCCGCTTTGATATGAGTGA+AGG | 0.542865 | tig0020612:+79122 | None:intergenic |
| ATCCACTTCCGCTTCAATTG+GGG | 0.545527 | tig0020612:-83490 | Msa1383790:CDS |
| TCCTTGAATCTTCCTCTGAA+AGG | 0.546389 | tig0020612:-81142 | Msa1383790:intron |
| GGTGCTGTCAAGTATACTAA+AGG | 0.548639 | tig0020612:-79574 | Msa1383790:CDS |
| TATTATAAAAGGAGAAGCAA+AGG | 0.549332 | tig0020612:+83768 | None:intergenic |
| TATTTGGAGGAAGGGAGGCT+GGG | 0.551779 | tig0020612:+79388 | None:intergenic |
| GTTCTTGATACACTTGGAAG+TGG | 0.551965 | tig0020612:-82197 | Msa1383790:CDS |
| CTGCCAAGAAAACTCATGCC+AGG | 0.553142 | tig0020612:-78355 | Msa1383790:CDS |
| CCAAAGTTAAACACCAGTGG+TGG | 0.555780 | tig0020612:-82170 | Msa1383790:CDS |
| GCCAGAGACAAACCCACCAC+TGG | 0.556299 | tig0020612:+82157 | None:intergenic |
| AAGAATTCAATGTATTCTCA+CGG | 0.556407 | tig0020612:-81843 | Msa1383790:CDS |
| TATCCAAAACGTTATAGTTG+TGG | 0.558251 | tig0020612:+78258 | None:intergenic |
| TCAGTGGCTCGTACCATTTG+CGG | 0.558291 | tig0020612:-79085 | Msa1383790:CDS |
| GTCTCTGGCAAGCTTTCCAG+AGG | 0.561603 | tig0020612:-82143 | Msa1383790:CDS |
| AAACATTCAGTTCCTCAAGA+AGG | 0.562368 | tig0020612:-82039 | Msa1383790:CDS |
| ATCTTACAGAGCTAATCAAA+TGG | 0.562545 | tig0020612:+78597 | None:intergenic |
| TTGGAGGGATGAACAATTTG+GGG | 0.565256 | tig0020612:-83638 | Msa1383790:CDS |
| TGGATTGCAACCGAGATGGA+AGG | 0.565419 | tig0020612:+79319 | None:intergenic |
| GAAATGGATTGCAACCGAGA+TGG | 0.566963 | tig0020612:+79315 | None:intergenic |
| TGTCCCTCGTATTTGGAGGA+AGG | 0.567652 | tig0020612:+79379 | None:intergenic |
| AATGTGTCCCTCGTATTTGG+AGG | 0.568090 | tig0020612:+79375 | None:intergenic |
| AGATGCCGAAAAGACAATGC+AGG | 0.570619 | tig0020612:-81580 | Msa1383790:CDS |
| ATTAGCAAAAGTGAGGAACT+TGG | 0.571334 | tig0020612:-78380 | Msa1383790:CDS |
| GTCCCTCGTATTTGGAGGAA+GGG | 0.574579 | tig0020612:+79380 | None:intergenic |
| ACAAAATGCCTCGAGGCCAA+TGG | 0.577458 | tig0020612:-78570 | Msa1383790:CDS |
| ATTTCAAGGAGGAGGAGCCC+GGG | 0.577633 | tig0020612:-78404 | Msa1383790:CDS |
| TGAAGTTCAGGTCTCTTGGA+AGG | 0.578768 | tig0020612:+78527 | None:intergenic |
| AGAATTCAATGTATTCTCAC+GGG | 0.583054 | tig0020612:-81842 | Msa1383790:CDS |
| CCAAAACGTTATAGTTGTGG+TGG | 0.583947 | tig0020612:+78261 | None:intergenic |
| TTAAGAGTGCCCTTCCATCT+CGG | 0.586379 | tig0020612:-79329 | Msa1383790:CDS |
| GGCCAATGGCAATGCCCACA+CGG | 0.587290 | tig0020612:-78556 | Msa1383790:CDS |
| AATGGGAGCTGTTTGTTCGG+CGG | 0.589590 | tig0020612:-83688 | Msa1383790:CDS |
| ATTGTTAACAGGGCTCATCA+AGG | 0.593222 | tig0020612:-78904 | Msa1383790:intron |
| AGATAGGATATTATTAGAGG+AGG | 0.593450 | tig0020612:-78429 | Msa1383790:CDS |
| TAAAGCTAGCTATAGGGCGG+TGG | 0.594166 | tig0020612:-82222 | Msa1383790:CDS |
| TGTTCATACCATGATTTCCA+AGG | 0.595508 | tig0020612:+80377 | None:intergenic |
| GGATTGCAACCGAGATGGAA+GGG | 0.595874 | tig0020612:+79320 | None:intergenic |
| TAGAGGAGGTAATTTCAAGG+AGG | 0.599131 | tig0020612:-78415 | Msa1383790:CDS |
| ATATATCTGATTGATCATGT+TGG | 0.602694 | tig0020612:+79510 | None:intergenic |
| TCTAAGTTCTAACCTTTCAG+AGG | 0.602716 | tig0020612:+81130 | None:intergenic |
| GGAGAAAGTTGAGTTCCCAA+TGG | 0.606564 | tig0020612:+78455 | None:intergenic |
| ACTAAAGGTCCTCAAAGACT+AGG | 0.608726 | tig0020612:-79559 | Msa1383790:CDS |
| AGTGGATAGACCGAATTCAT+CGG | 0.617545 | tig0020612:+83506 | None:intergenic |
| GCAATGCAGAAGAACTTGGA+GGG | 0.623845 | tig0020612:-83653 | Msa1383790:CDS |
| CAAAGTTAAACACCAGTGGT+GGG | 0.625267 | tig0020612:-82169 | Msa1383790:CDS |
| CCTCCCTTCCTCCAAATACG+AGG | 0.628725 | tig0020612:-79383 | Msa1383790:CDS |
| ACCTTGAGAAATGTCGATGT+AGG | 0.628997 | tig0020612:+81773 | None:intergenic |
| GGGCATTGCCATTGGCCTCG+AGG | 0.630544 | tig0020612:+78562 | None:intergenic |
| ACCTACATCGACATTTCTCA+AGG | 0.631682 | tig0020612:-81774 | Msa1383790:intron |
| TTGGTGAATGGGCAAACACA+AGG | 0.636366 | tig0020612:-78870 | Msa1383790:intron |
| CCTCGTATTTGGAGGAAGGG+AGG | 0.639013 | tig0020612:+79383 | None:intergenic |
| GTAGCTAATACAATAACCAA+AGG | 0.639145 | tig0020612:-82092 | Msa1383790:CDS |
| GCTGAGAATTTACGACTCTG+AGG | 0.643521 | tig0020612:+83827 | None:intergenic |
| CTCCCTTCCTCCAAATACGA+GGG | 0.644751 | tig0020612:-79382 | Msa1383790:CDS |
| TTGGTCCAGATATTTAGAGG+AGG | 0.646740 | tig0020612:-80657 | Msa1383790:intron |
| AGTTCAGGTCTCTTGGAAGG+AGG | 0.660563 | tig0020612:+78530 | None:intergenic |
| AGCAATGCAGAAGAACTTGG+AGG | 0.662834 | tig0020612:-83654 | Msa1383790:CDS |
| CTCCTTCACTCATATCAAAG+CGG | 0.662984 | tig0020612:-79124 | Msa1383790:CDS |
| CCCGGGAATTAGCAAAAGTG+AGG | 0.666356 | tig0020612:-78387 | Msa1383790:CDS |
| CTTGGAAGGAGGAGACCGTG+TGG | 0.669539 | tig0020612:+78541 | None:intergenic |
| TTGGAAGGAGGAGACCGTGT+GGG | 0.672365 | tig0020612:+78542 | None:intergenic |
| CGGCGTAGTAAAGTGTCTGG+AGG | 0.672625 | tig0020612:+78669 | None:intergenic |
| TCTCTGGCAAGCTTTCCAGA+GGG | 0.673396 | tig0020612:-82142 | Msa1383790:CDS |
| TGGGAGCTGTTTGTTCGGCG+GGG | 0.678824 | tig0020612:-83686 | Msa1383790:CDS |
| ATGCCAAAGTTAAACACCAG+TGG | 0.681956 | tig0020612:-82173 | Msa1383790:CDS |
| GTGGTGGTTGGCGATGAGTG+TGG | 0.685493 | tig0020612:+78277 | None:intergenic |
| CTGAACTTCAGTCTAAGATG+CGG | 0.686840 | tig0020612:-78514 | Msa1383790:CDS |
| AAATGAATAAGACTCTTCAG+TGG | 0.700574 | tig0020612:-79101 | Msa1383790:CDS |
| GGGTAAAGCTAGCTATAGGG+CGG | 0.706000 | tig0020612:-82225 | Msa1383790:CDS |
| ATATGTGTAAAGACCCACAA+TGG | 0.711309 | tig0020612:-81801 | Msa1383790:CDS |
| TAGTCTAGTTCATCATACTG+CGG | 0.726979 | tig0020612:-81550 | Msa1383790:intron |
| GATCCAGACAAAATGCCTCG+AGG | 0.746283 | tig0020612:-78577 | Msa1383790:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAACAATCTATATAAATTA+GGG | + | tig0020612:79408-79427 | None:intergenic | 10.0% |
| !! | ATAAACAATCTATATAAATT+AGG | + | tig0020612:79409-79428 | None:intergenic | 10.0% |
| !!! | TTATCTTTTTGAAATTTTTA+GGG | - | tig0020612:80036-80055 | Msa1383790:intron | 10.0% |
| !! | TTTATTAATTAATTATGAGT+TGG | + | tig0020612:80216-80235 | None:intergenic | 10.0% |
| !! | ATATATAATATAAAAGATCT+AGG | + | tig0020612:80501-80520 | None:intergenic | 10.0% |
| !!! | AATATATTTTTGACAAAAAA+AGG | + | tig0020612:81011-81030 | None:intergenic | 10.0% |
| !!! | ATTTAAAATAAAAATTAGCA+GGG | + | tig0020612:81992-82011 | None:intergenic | 10.0% |
| !!! | AATTTAAAATAAAAATTAGC+AGG | + | tig0020612:81993-82012 | None:intergenic | 10.0% |
| !! | ATTAAAATTGTACAAAAAAA+TGG | + | tig0020612:83785-83804 | None:intergenic | 10.0% |
| !!! | AGTATGTTGATTATTATAAA+AGG | + | tig0020612:78148-78167 | None:intergenic | 15.0% |
| !! | AAGAAGAATACAAATAAAAA+TGG | - | tig0020612:78196-78215 | Msa1383790:three_prime_UTR | 15.0% |
| !! | AGAAGAATACAAATAAAAAT+GGG | - | tig0020612:78197-78216 | Msa1383790:three_prime_UTR | 15.0% |
| !!! | CTTATCTTTTTGAAATTTTT+AGG | - | tig0020612:80035-80054 | Msa1383790:intron | 15.0% |
| !! | TGATTATCAACAAAAAATTA+AGG | - | tig0020612:80729-80748 | Msa1383790:CDS | 15.0% |
| !! | TTATTAAAATGAATACTTCT+TGG | - | tig0020612:80850-80869 | Msa1383790:intron | 15.0% |
| !!! | ATGTATATTGTAAATTTTTC+TGG | - | tig0020612:81936-81955 | Msa1383790:intron | 15.0% |
| !! | TAAAATCATGAGTTTATATA+TGG | + | tig0020612:83819-83838 | None:intergenic | 15.0% |
| !!! | TCTTTTATAGTTAAGACTTA+AGG | - | tig0020612:78541-78560 | Msa1383790:CDS | 20.0% |
| !! | AAGATAAACTCCTAAAATTA+TGG | - | tig0020612:78889-78908 | Msa1383790:CDS | 20.0% |
| !! | AGTGATACTAATAGTAAAAA+GGG | + | tig0020612:79181-79200 | None:intergenic | 20.0% |
| !! | AATCTATATAAATTAGGGAA+GGG | + | tig0020612:79403-79422 | None:intergenic | 20.0% |
| !! | AAATTCATAGCAAAAACAAA+AGG | + | tig0020612:79997-80016 | None:intergenic | 20.0% |
| !! | TTTCAAAAAGATAAGTGATA+AGG | + | tig0020612:80030-80049 | None:intergenic | 20.0% |
| !!! | CTAATCTGATATTTCATTTT+CGG | + | tig0020612:80268-80287 | None:intergenic | 20.0% |
| !! | AGAAACTAAAAAAATGACAA+TGG | + | tig0020612:80451-80470 | None:intergenic | 20.0% |
| !! | TATAAAAGATCTAGGAATTA+AGG | + | tig0020612:80493-80512 | None:intergenic | 20.0% |
| !!! | TAATTTTCTCGTTTTAATGT+AGG | - | tig0020612:80666-80685 | Msa1383790:CDS | 20.0% |
| !! | TCAACAAAAAATTAAGGAAA+TGG | - | tig0020612:80735-80754 | Msa1383790:CDS | 20.0% |
| !!! | CTATTTTATCTTAACATTTG+AGG | - | tig0020612:80909-80928 | Msa1383790:intron | 20.0% |
| !! | TTGAAAACCAAATTCTTATT+GGG | + | tig0020612:80959-80978 | None:intergenic | 20.0% |
| !! | TTTGAAAACCAAATTCTTAT+TGG | + | tig0020612:80960-80979 | None:intergenic | 20.0% |
| !!! | TTCTGAGGATTTAAATTTTT+AGG | + | tig0020612:81105-81124 | None:intergenic | 20.0% |
| !!! | AGGAGGTATATTATTAATAA+AGG | - | tig0020612:81262-81281 | Msa1383790:intron | 20.0% |
| !!! | TTTTCTTCAATAAAAAGAGA+AGG | + | tig0020612:81684-81703 | None:intergenic | 20.0% |
| !! | AAAATGAGCATAAAAAAGAT+TGG | + | tig0020612:81772-81791 | None:intergenic | 20.0% |
| !! | ACGAAAACATTTATTTGATT+AGG | + | tig0020612:82459-82478 | None:intergenic | 20.0% |
| !!! | TCTAGTCCTTTTTAATTTTT+TGG | - | tig0020612:82665-82684 | Msa1383790:intron | 20.0% |
| !! | AATAAATTTCAATCTTCAAG+AGG | + | tig0020612:82715-82734 | None:intergenic | 20.0% |
| !! | TTGAATTATGCTAAATGTAA+TGG | - | tig0020612:82740-82759 | Msa1383790:intron | 20.0% |
| !!! | AAAAATATTTAAAACCTGAC+AGG | + | tig0020612:82893-82912 | None:intergenic | 20.0% |
| !! | TGTTTACATTATTGAATTGT+TGG | - | tig0020612:83272-83291 | Msa1383790:intron | 20.0% |
| !! | AAATTGTACAAAAAAATGGA+TGG | + | tig0020612:83781-83800 | None:intergenic | 20.0% |
| ! | TATTATAAAAGGAGAAGCAA+AGG | + | tig0020612:78137-78156 | None:intergenic | 25.0% |
| !! | AGGAAAACAGTTTTACAAAT+CGG | - | tig0020612:78309-78328 | Msa1383790:CDS | 25.0% |
| !!! | AAGATGATTTTTCAGATTCA+AGG | - | tig0020612:78333-78352 | Msa1383790:CDS | 25.0% |
| !!! | TTTAACATATTTTGAGGTCT+CGG | + | tig0020612:78606-78625 | None:intergenic | 25.0% |
| !!! | TTGAACATGGTTTTAAATTG+CGG | + | tig0020612:78642-78661 | None:intergenic | 25.0% |
| !!! | TCAAACTTTTTTTGAGAACT+CGG | - | tig0020612:78685-78704 | Msa1383790:CDS | 25.0% |
| ! | TTATCTTACTTAACCCATTT+GGG | + | tig0020612:78876-78895 | None:intergenic | 25.0% |
| ! | TTTATCTTACTTAACCCATT+TGG | + | tig0020612:78877-78896 | None:intergenic | 25.0% |
| ! | GAGTGATACTAATAGTAAAA+AGG | + | tig0020612:79182-79201 | None:intergenic | 25.0% |
| ! | ATCTATATAAATTAGGGAAG+GGG | + | tig0020612:79402-79421 | None:intergenic | 25.0% |
| ! | CAATCTATATAAATTAGGGA+AGG | + | tig0020612:79404-79423 | None:intergenic | 25.0% |
| !!! | AGTAAAAAAGTACTGAAGTT+AGG | + | tig0020612:79531-79550 | None:intergenic | 25.0% |
| ! | AGGGAAGAAAATATCAATAT+TGG | - | tig0020612:79779-79798 | Msa1383790:intron | 25.0% |
| ! | AGAAAGTGAGTGAAATAAAA+TGG | + | tig0020612:79838-79857 | None:intergenic | 25.0% |
| ! | AAGAATTCAATGTATTCTCA+CGG | - | tig0020612:80059-80078 | Msa1383790:intron | 25.0% |
| ! | ATGAAATATCAGATTAGACT+TGG | - | tig0020612:80271-80290 | Msa1383790:intron | 25.0% |
| !! | TGCATAATCTTTTATCTCAT+TGG | - | tig0020612:80404-80423 | Msa1383790:CDS | 25.0% |
| !! | TTCTTTGCTTGTTAAAGTTA+GGG | - | tig0020612:80603-80622 | Msa1383790:intron | 25.0% |
| ! | ATACCAAGATTTGACAAAAA+GGG | + | tig0020612:80826-80845 | None:intergenic | 25.0% |
| ! | AATACCAAGATTTGACAAAA+AGG | + | tig0020612:80827-80846 | None:intergenic | 25.0% |
| !! | TTTTATCTTAACATTTGAGG+TGG | - | tig0020612:80912-80931 | Msa1383790:intron | 25.0% |
| ! | TAGTTATCCCAATAAGAATT+TGG | - | tig0020612:80949-80968 | Msa1383790:intron | 25.0% |
| ! | GTCAAAAATATATTCTTTCC+TGG | - | tig0020612:81017-81036 | Msa1383790:intron | 25.0% |
| ! | TTCATCTGAAAATATTTCTC+AGG | + | tig0020612:81046-81065 | None:intergenic | 25.0% |
| ! | AGAAGTTATCTAATGATTGA+CGG | - | tig0020612:81121-81140 | Msa1383790:intron | 25.0% |
| ! | ACTTGAAAAAGAAATCTCTT+TGG | - | tig0020612:81226-81245 | Msa1383790:intron | 25.0% |
| ! | TAATATCCAAAACTTCATTC+AGG | + | tig0020612:81343-81362 | None:intergenic | 25.0% |
| ! | AATAAAAAGAGAAGGAATGT+GGG | + | tig0020612:81676-81695 | None:intergenic | 25.0% |
| ! | AAGAATCATGACATATAGAT+AGG | + | tig0020612:81718-81737 | None:intergenic | 25.0% |
| ! | TACATAGCGTTTATTTACAA+GGG | + | tig0020612:81921-81940 | None:intergenic | 25.0% |
| ! | ATACATAGCGTTTATTTACA+AGG | + | tig0020612:81922-81941 | None:intergenic | 25.0% |
| !!! | TTCTGCTAAATCATTTTTTC+TGG | - | tig0020612:82072-82091 | Msa1383790:CDS | 25.0% |
| !!! | GGAATTCCTTAATCATTTTT+TGG | - | tig0020612:82146-82165 | Msa1383790:CDS | 25.0% |
| ! | CACAAACCAAAAAATGATTA+AGG | + | tig0020612:82155-82174 | None:intergenic | 25.0% |
| ! | TAACTCATAACAACATCTAA+TGG | - | tig0020612:82259-82278 | Msa1383790:intron | 25.0% |
| ! | TCTAAATCGTTATGAAATTG+TGG | - | tig0020612:82289-82308 | Msa1383790:intron | 25.0% |
| ! | CTAAATCGTTATGAAATTGT+GGG | - | tig0020612:82290-82309 | Msa1383790:intron | 25.0% |
| ! | ATATATCTGATTGATCATGT+TGG | + | tig0020612:82395-82414 | None:intergenic | 25.0% |
| ! | TTTATTGCGCTAACAAAATT+TGG | - | tig0020612:82429-82448 | Msa1383790:intron | 25.0% |
| ! | TTATTGCGCTAACAAAATTT+GGG | - | tig0020612:82430-82449 | Msa1383790:intron | 25.0% |
| !!! | AGTCCTTTTTAATTTTTTGG+TGG | - | tig0020612:82668-82687 | Msa1383790:intron | 25.0% |
| !!! | GTCCTTTTTAATTTTTTGGT+GGG | - | tig0020612:82669-82688 | Msa1383790:intron | 25.0% |
| ! | TACCCACCAAAAAATTAAAA+AGG | + | tig0020612:82674-82693 | None:intergenic | 25.0% |
| !!! | TTTAATTTTTTGGTGGGTAT+TGG | - | tig0020612:82675-82694 | Msa1383790:intron | 25.0% |
| !!! | TTAATTTTTTGGTGGGTATT+GGG | - | tig0020612:82676-82695 | Msa1383790:intron | 25.0% |
| ! | GTTATTTGTTCACATTATAC+AGG | + | tig0020612:83105-83124 | None:intergenic | 25.0% |
| ! | TAATGTGAACAAATAACAAG+TGG | - | tig0020612:83108-83127 | Msa1383790:intron | 25.0% |
| ! | ACATTATTGAATTGTTGGTA+TGG | - | tig0020612:83277-83296 | Msa1383790:intron | 25.0% |
| ! | TCTAATAATATCCTATCTTC+TGG | + | tig0020612:83471-83490 | None:intergenic | 25.0% |
| ! | AGAAGATAGGATATTATTAG+AGG | - | tig0020612:83470-83489 | Msa1383790:intron | 25.0% |
| !!! | CTATAACGTTTTGGATATTA+TGG | - | tig0020612:83650-83669 | Msa1383790:CDS | 25.0% |
| ! | AATAATTGTCGGCATAAAAA+AGG | + | tig0020612:83756-83775 | None:intergenic | 25.0% |
| GCAAAGGAGAATTATGAAAT+GGG | + | tig0020612:78121-78140 | None:intergenic | 30.0% | |
| AGCAAAGGAGAATTATGAAA+TGG | + | tig0020612:78122-78141 | None:intergenic | 30.0% | |
| AAGCAAAACAAGCTAGAAAA+TGG | - | tig0020612:78368-78387 | Msa1383790:CDS | 30.0% | |
| ATAGTTAAGACTTAAGGACA+TGG | - | tig0020612:78547-78566 | Msa1383790:CDS | 30.0% | |
| !!! | ATGGCTATGGTTTTAAATTG+CGG | - | tig0020612:78566-78585 | Msa1383790:CDS | 30.0% |
| ! | ACGCGATTTAACATATTTTG+AGG | + | tig0020612:78612-78631 | None:intergenic | 30.0% |
| TTGAATGCAAAAATTCAGCT+TGG | + | tig0020612:78669-78688 | None:intergenic | 30.0% | |
| CTCCTAAAATTATGGAATTC+CGG | - | tig0020612:78897-78916 | Msa1383790:intron | 30.0% | |
| ! | TTCCGGAATTCCATAATTTT+AGG | + | tig0020612:78902-78921 | None:intergenic | 30.0% |
| AAATTATGGAATTCCGGAAA+TGG | - | tig0020612:78903-78922 | Msa1383790:intron | 30.0% | |
| AATTTGAACTTTGTCTCTTG+GGG | + | tig0020612:78985-79004 | None:intergenic | 30.0% | |
| GAATTTGAACTTTGTCTCTT+GGG | + | tig0020612:78986-79005 | None:intergenic | 30.0% | |
| ! | CATTTTACAAATATCCCTGA+GGG | + | tig0020612:79008-79027 | None:intergenic | 30.0% |
| ! | TCATTTTACAAATATCCCTG+AGG | + | tig0020612:79009-79028 | None:intergenic | 30.0% |
| GTATCACTTAAAAACATAGC+AGG | - | tig0020612:79035-79054 | Msa1383790:intron | 30.0% | |
| TGCAAATAGAAACTCCATAT+CGG | + | tig0020612:79080-79099 | None:intergenic | 30.0% | |
| !!! | TATCTTTTTTTCCACTTTGC+TGG | - | tig0020612:79106-79125 | Msa1383790:CDS | 30.0% |
| !!! | ATCTTTTTTTCCACTTTGCT+GGG | - | tig0020612:79107-79126 | Msa1383790:CDS | 30.0% |
| CATAAGTGTAATATGACAGA+AGG | - | tig0020612:79216-79235 | Msa1383790:intron | 30.0% | |
| TCTATATAAATTAGGGAAGG+GGG | + | tig0020612:79401-79420 | None:intergenic | 30.0% | |
| !! | TTCACTTTGAGATTCTAGTA+TGG | - | tig0020612:79551-79570 | Msa1383790:CDS | 30.0% |
| GAAATTTAGTGTCTCATGAT+TGG | - | tig0020612:79613-79632 | Msa1383790:intron | 30.0% | |
| TTATCATAGGTCACTAGAAA+GGG | - | tig0020612:79645-79664 | Msa1383790:intron | 30.0% | |
| ! | TATTGATATTTTCTTCCCTC+TGG | + | tig0020612:79778-79797 | None:intergenic | 30.0% |
| GTAGCTAATACAATAACCAA+AGG | - | tig0020612:79810-79829 | Msa1383790:intron | 30.0% | |
| ! | AATTTAAAACCTCCTTCTTG+AGG | + | tig0020612:79878-79897 | None:intergenic | 30.0% |
| !!! | AAGGAGGTTTTAAATTCAGA+AGG | - | tig0020612:79882-79901 | Msa1383790:intron | 30.0% |
| ! | ACAATTAGTCTCAACAGATA+TGG | - | tig0020612:79911-79930 | Msa1383790:intron | 30.0% |
| ! | GTTAATAAGTTTTGCTGAGA+TGG | - | tig0020612:79938-79957 | Msa1383790:intron | 30.0% |
| ATAAGTGATAAGGAACACAA+AGG | + | tig0020612:80020-80039 | None:intergenic | 30.0% | |
| AGAATTCAATGTATTCTCAC+GGG | - | tig0020612:80060-80079 | Msa1383790:intron | 30.0% | |
| TCATAAATAAGCAACGTATC+AGG | + | tig0020612:80161-80180 | None:intergenic | 30.0% | |
| ACGTTGCTTATTTATGACAA+CGG | - | tig0020612:80164-80183 | Msa1383790:intron | 30.0% | |
| GAAAAACATATGAATACACC+TGG | + | tig0020612:80545-80564 | None:intergenic | 30.0% | |
| ! | GTTCTTTGCTTGTTAAAGTT+AGG | - | tig0020612:80602-80621 | Msa1383790:intron | 30.0% |
| !! | TTCCATTGAATGCTTTTTGT+AGG | - | tig0020612:80627-80646 | Msa1383790:intron | 30.0% |
| !! | AACCTACAAAAAGCATTCAA+TGG | + | tig0020612:80632-80651 | None:intergenic | 30.0% |
| GTTCATAAGCACTTAATTCA+TGG | + | tig0020612:80699-80718 | None:intergenic | 30.0% | |
| TACCAAGATTTGACAAAAAG+GGG | + | tig0020612:80825-80844 | None:intergenic | 30.0% | |
| AAGGAATTACTCCTATCAAT+GGG | + | tig0020612:80992-81011 | None:intergenic | 30.0% | |
| AAAGGAATTACTCCTATCAA+TGG | + | tig0020612:80993-81012 | None:intergenic | 30.0% | |
| CAATCATTAGATAACTTCTG+AGG | + | tig0020612:81120-81139 | None:intergenic | 30.0% | |
| ATATACCTCCTCTAAATATC+TGG | + | tig0020612:81253-81272 | None:intergenic | 30.0% | |
| ACGAATTGCTTGATGTATAT+AGG | + | tig0020612:81500-81519 | None:intergenic | 30.0% | |
| CAATAAAAAGAGAAGGAATG+TGG | + | tig0020612:81677-81696 | None:intergenic | 30.0% | |
| !! | GAAAGCTTTATTTGGAATCA+TGG | - | tig0020612:81960-81979 | Msa1383790:CDS | 30.0% |
| TAATCACATTATTAGAGCCA+TGG | + | tig0020612:82040-82059 | None:intergenic | 30.0% | |
| !! | ATGGCTCTAATAATGTGATT+AGG | - | tig0020612:82039-82058 | Msa1383790:CDS | 30.0% |
| !!! | GCTAAATCATTTTTTCTGGA+TGG | - | tig0020612:82076-82095 | Msa1383790:CDS | 30.0% |
| !!! | ATCATTTTTTCTGGATGGAT+TGG | - | tig0020612:82081-82100 | Msa1383790:CDS | 30.0% |
| !! | GCTTACTAAGTAAAAGCATT+TGG | - | tig0020612:82103-82122 | Msa1383790:CDS | 30.0% |
| GAAAACTGTGAGATCATTAA+GGG | - | tig0020612:82125-82144 | Msa1383790:CDS | 30.0% | |
| ! | GTTATGAAATTGTGGGTTAA+TGG | - | tig0020612:82297-82316 | Msa1383790:intron | 30.0% |
| ACTAGAAATTGCAAGACAAA+TGG | + | tig0020612:82651-82670 | None:intergenic | 30.0% | |
| AAATGAATAAGACTCTTCAG+TGG | - | tig0020612:82801-82820 | Msa1383790:intron | 30.0% | |
| ! | TATTTAAAACCTGACAGGTA+TGG | + | tig0020612:82888-82907 | None:intergenic | 30.0% |
| TACTTGTCGATATTGTTAAC+AGG | - | tig0020612:82987-83006 | Msa1383790:intron | 30.0% | |
| ACTTGTCGATATTGTTAACA+GGG | - | tig0020612:82988-83007 | Msa1383790:intron | 30.0% | |
| AACATCTATCTTCTGCTTAT+CGG | + | tig0020612:83256-83275 | None:intergenic | 30.0% | |
| ATCTTACAGAGCTAATCAAA+TGG | + | tig0020612:83308-83327 | None:intergenic | 30.0% | |
| AGATAGGATATTATTAGAGG+AGG | - | tig0020612:83473-83492 | Msa1383790:intron | 30.0% | |
| TATTAGAGGAGGTAATTTCA+AGG | - | tig0020612:83484-83503 | Msa1383790:CDS | 30.0% | |
| TATCCAAAACGTTATAGTTG+TGG | + | tig0020612:83647-83666 | None:intergenic | 30.0% | |
| !! | AACGTTTTGGATATTATGGA+TGG | - | tig0020612:83654-83673 | Msa1383790:CDS | 30.0% |
| !! | TTCCTTCTTTTGAAGATTCT+TGG | - | tig0020612:83723-83742 | Msa1383790:five_prime_UTR | 30.0% |
| TACCAAGAATCTTCAAAAGA+AGG | + | tig0020612:83728-83747 | None:intergenic | 30.0% | |
| AATGGATGGTGAATAATTGT+CGG | + | tig0020612:83767-83786 | None:intergenic | 30.0% | |
| ! | GGAGAATTATGAAATGGGTT+GGG | + | tig0020612:78116-78135 | None:intergenic | 35.0% |
| AGGAGAATTATGAAATGGGT+TGG | + | tig0020612:78117-78136 | None:intergenic | 35.0% | |
| AAAAATGGGAGCTGTTTGTT+CGG | - | tig0020612:78211-78230 | Msa1383790:three_prime_UTR | 35.0% | |
| ! | AATGGCTTTTCCGATGAATT+CGG | - | tig0020612:78386-78405 | Msa1383790:CDS | 35.0% |
| ATTTCCTTCGGTAGCAATTT+CGG | + | tig0020612:78792-78811 | None:intergenic | 35.0% | |
| ! | GTCTCAAGTTTGATTTCCTT+CGG | + | tig0020612:78804-78823 | None:intergenic | 35.0% |
| TCAAACTTGAGACCTTTGAA+AGG | - | tig0020612:78811-78830 | Msa1383790:intron | 35.0% | |
| GAAGATTTATGCACCATTTC+CGG | + | tig0020612:78919-78938 | None:intergenic | 35.0% | |
| GGAATTTGAACTTTGTCTCT+TGG | + | tig0020612:78987-79006 | None:intergenic | 35.0% | |
| ACAAAGTTCAAATTCCCTCA+GGG | - | tig0020612:78991-79010 | Msa1383790:intron | 35.0% | |
| GGGGGAAACTATTAGTAATT+AGG | + | tig0020612:79383-79402 | None:intergenic | 35.0% | |
| TTGAGATTCTAGTATGGCAT+TGG | - | tig0020612:79557-79576 | Msa1383790:CDS | 35.0% | |
| AAATGAAGAAATTCCACCAC+AGG | + | tig0020612:79593-79612 | None:intergenic | 35.0% | |
| ! | TTGGTGTCTCTTCTTATCAT+AGG | - | tig0020612:79632-79651 | Msa1383790:intron | 35.0% |
| CTTATCATAGGTCACTAGAA+AGG | - | tig0020612:79644-79663 | Msa1383790:intron | 35.0% | |
| ACTAGAAAGGGCTCTTTATT+GGG | - | tig0020612:79657-79676 | Msa1383790:intron | 35.0% | |
| TATTGGGTAAAGCTAGCTAT+AGG | - | tig0020612:79673-79692 | Msa1383790:intron | 35.0% | |
| ATTGGGTAAAGCTAGCTATA+GGG | - | tig0020612:79674-79693 | Msa1383790:intron | 35.0% | |
| GTGAAATAAAATGGCTCCTT+TGG | + | tig0020612:79829-79848 | None:intergenic | 35.0% | |
| AAACATTCAGTTCCTCAAGA+AGG | - | tig0020612:79863-79882 | Msa1383790:intron | 35.0% | |
| ATATGTGTAAAGACCCACAA+TGG | - | tig0020612:80101-80120 | Msa1383790:intron | 35.0% | |
| AGATTAGACTTGGATGTCTT+GGG | - | tig0020612:80281-80300 | Msa1383790:intron | 35.0% | |
| ! | TAGTCTAGTTCATCATACTG+CGG | - | tig0020612:80352-80371 | Msa1383790:intron | 35.0% |
| TTATCTCATTGGTGAACTGA+TGG | - | tig0020612:80415-80434 | Msa1383790:CDS | 35.0% | |
| ! | CAGTTTTCATTTGTATCACC+AGG | - | tig0020612:80524-80543 | Msa1383790:intron | 35.0% |
| ! | TCTAAGTTCTAACCTTTCAG+AGG | + | tig0020612:80775-80794 | None:intergenic | 35.0% |
| TTTGACAAAAAGGGGAAGAT+TGG | + | tig0020612:80817-80836 | None:intergenic | 35.0% | |
| ! | TTCCCCTTTTTGTCAAATCT+TGG | - | tig0020612:80820-80839 | Msa1383790:intron | 35.0% |
| AACATCTGTTACCCATTGAT+AGG | - | tig0020612:80978-80997 | Msa1383790:intron | 35.0% | |
| AAAATATTTCTCAGGTCACC+AGG | + | tig0020612:81038-81057 | None:intergenic | 35.0% | |
| TCTTTGGTCCAGATATTTAG+AGG | - | tig0020612:81242-81261 | Msa1383790:intron | 35.0% | |
| TCCAAAACTTCATTCAGGTA+GGG | + | tig0020612:81338-81357 | None:intergenic | 35.0% | |
| ATCCAAAACTTCATTCAGGT+AGG | + | tig0020612:81339-81358 | None:intergenic | 35.0% | |
| TGTTCATACCATGATTTCCA+AGG | + | tig0020612:81528-81547 | None:intergenic | 35.0% | |
| TCATCACATCTAGTATGCTT+AGG | - | tig0020612:81624-81643 | Msa1383790:intron | 35.0% | |
| TCATGACATATAGATAGGCA+GGG | + | tig0020612:81713-81732 | None:intergenic | 35.0% | |
| ATCATGACATATAGATAGGC+AGG | + | tig0020612:81714-81733 | None:intergenic | 35.0% | |
| !! | AATAGCTGCCTTCATTTTTG+TGG | - | tig0020612:81845-81864 | Msa1383790:CDS | 35.0% |
| TAGCTCAACCACAAAAATGA+AGG | + | tig0020612:81856-81875 | None:intergenic | 35.0% | |
| !! | TTTCTGGCGAAAGCTTTATT+TGG | - | tig0020612:81952-81971 | Msa1383790:intron | 35.0% |
| GGAAAACTGTGAGATCATTA+AGG | - | tig0020612:82124-82143 | Msa1383790:CDS | 35.0% | |
| !! | CAGCAATTTCTGTTTCTATC+AGG | - | tig0020612:82484-82503 | Msa1383790:intron | 35.0% |
| TATAATGTGTCCCTCGTATT+TGG | + | tig0020612:82533-82552 | None:intergenic | 35.0% | |
| ATCCATTTCTATCCAGAAAG+AGG | - | tig0020612:82601-82620 | Msa1383790:intron | 35.0% | |
| TACCTCTTTCTGGATAGAAA+TGG | + | tig0020612:82606-82625 | None:intergenic | 35.0% | |
| AATTTCAATCTTCAAGAGGC+AGG | + | tig0020612:82711-82730 | None:intergenic | 35.0% | |
| TTGATTGTATTTGCCGCAAA+TGG | + | tig0020612:82833-82852 | None:intergenic | 35.0% | |
| TATTTCCAGCTACGAAAACA+AGG | + | tig0020612:82934-82953 | None:intergenic | 35.0% | |
| TCAGTTATCATGGATTCTCA+TGG | + | tig0020612:83146-83165 | None:intergenic | 35.0% | |
| AACAGGAACATCAGTTATCA+TGG | + | tig0020612:83156-83175 | None:intergenic | 35.0% | |
| ATTAGCAAAAGTGAGGAACT+TGG | - | tig0020612:83522-83541 | Msa1383790:CDS | 35.0% | |
| TTGGATATTATGGATGGCTT+AGG | - | tig0020612:83660-83679 | Msa1383790:CDS | 35.0% | |
| ACTTGGAGGGATGAACAATT+TGG | - | tig0020612:78262-78281 | Msa1383790:CDS | 40.0% | |
| CTTGGAGGGATGAACAATTT+GGG | - | tig0020612:78263-78282 | Msa1383790:CDS | 40.0% | |
| TTGGAGGGATGAACAATTTG+GGG | - | tig0020612:78264-78283 | Msa1383790:CDS | 40.0% | |
| ! | ATGAACAATTTGGGGTTCTC+TGG | - | tig0020612:78272-78291 | Msa1383790:CDS | 40.0% |
| ! | TGAACAATTTGGGGTTCTCT+GGG | - | tig0020612:78273-78292 | Msa1383790:CDS | 40.0% |
| AGTGGATAGACCGAATTCAT+CGG | + | tig0020612:78399-78418 | None:intergenic | 40.0% | |
| TATCCACTTCCGCTTCAATT+GGG | - | tig0020612:78411-78430 | Msa1383790:CDS | 40.0% | |
| !! | CTGTTTTTCCCCAATTGAAG+CGG | + | tig0020612:78423-78442 | None:intergenic | 40.0% |
| AAGACTTAAGGACATGGCTA+TGG | - | tig0020612:78553-78572 | Msa1383790:CDS | 40.0% | |
| TCAGCTTGGTTTCTTGAACA+TGG | + | tig0020612:78655-78674 | None:intergenic | 40.0% | |
| AGCTAGATCAAAGCTCTTGA+TGG | - | tig0020612:78757-78776 | Msa1383790:intron | 40.0% | |
| TTTGAGTGAGCTCCTTTCAA+AGG | + | tig0020612:78826-78845 | None:intergenic | 40.0% | |
| TTTGAAAGGAGCTCACTCAA+AGG | - | tig0020612:78825-78844 | Msa1383790:intron | 40.0% | |
| CTTACTTAACCCATTTGGGT+TGG | + | tig0020612:78872-78891 | None:intergenic | 40.0% | |
| TTACAAGGTCAAGCTCTTAG+AGG | + | tig0020612:78962-78981 | None:intergenic | 40.0% | |
| GACAAAGTTCAAATTCCCTC+AGG | - | tig0020612:78990-79009 | Msa1383790:intron | 40.0% | |
| ! | GTAGCACCAGTGTTGTTAAA+CGG | + | tig0020612:79361-79380 | None:intergenic | 40.0% |
| GGGCTCACTTATTCATATCA+TGG | + | tig0020612:79434-79453 | None:intergenic | 40.0% | |
| !! | AACTAGAGGCATTTGTATGG+GGG | + | tig0020612:79455-79474 | None:intergenic | 40.0% |
| !! | CAACTAGAGGCATTTGTATG+GGG | + | tig0020612:79456-79475 | None:intergenic | 40.0% |
| !! | GCAACTAGAGGCATTTGTAT+GGG | + | tig0020612:79457-79476 | None:intergenic | 40.0% |
| !! | AGCAACTAGAGGCATTTGTA+TGG | + | tig0020612:79458-79477 | None:intergenic | 40.0% |
| ATACAAATGCCTCTAGTTGC+TGG | - | tig0020612:79457-79476 | Msa1383790:intron | 40.0% | |
| !! | AGTATGGCATTGGCATGTTA+TGG | - | tig0020612:79567-79586 | Msa1383790:CDS | 40.0% |
| CACTAGAAAGGGCTCTTTAT+TGG | - | tig0020612:79656-79675 | Msa1383790:intron | 40.0% | |
| GTGGAAGTTCTTGATACACT+TGG | - | tig0020612:79699-79718 | Msa1383790:intron | 40.0% | |
| GTTCTTGATACACTTGGAAG+TGG | - | tig0020612:79705-79724 | Msa1383790:intron | 40.0% | |
| ATGCCAAAGTTAAACACCAG+TGG | - | tig0020612:79729-79748 | Msa1383790:intron | 40.0% | |
| CAAAGTTAAACACCAGTGGT+GGG | - | tig0020612:79733-79752 | Msa1383790:intron | 40.0% | |
| ! | GTTTTGCTGAGATGGACAAA+AGG | - | tig0020612:79946-79965 | Msa1383790:intron | 40.0% |
| TCACGGGAAGTAGTTAGATT+TGG | - | tig0020612:80076-80095 | Msa1383790:intron | 40.0% | |
| ACCTACATCGACATTTCTCA+AGG | - | tig0020612:80128-80147 | Msa1383790:intron | 40.0% | |
| ACCTTGAGAAATGTCGATGT+AGG | + | tig0020612:80132-80151 | None:intergenic | 40.0% | |
| CAGATTAGACTTGGATGTCT+TGG | - | tig0020612:80280-80299 | Msa1383790:intron | 40.0% | |
| ! | GAACTCCTGCATTGTCTTTT+CGG | + | tig0020612:80330-80349 | None:intergenic | 40.0% |
| TCATACTGCGGTAAGCTTAT+TGG | - | tig0020612:80364-80383 | Msa1383790:intron | 40.0% | |
| CATTTATGTTTCCCTGCTTC+TGG | - | tig0020612:80569-80588 | Msa1383790:intron | 40.0% | |
| TCCTTGAATCTTCCTCTGAA+AGG | - | tig0020612:80760-80779 | Msa1383790:intron | 40.0% | |
| ACCTTTCAGAGGAAGATTCA+AGG | + | tig0020612:80764-80783 | None:intergenic | 40.0% | |
| TACACGCTCTGTATAAATGC+AGG | - | tig0020612:81147-81166 | Msa1383790:CDS | 40.0% | |
| TTGGTCCAGATATTTAGAGG+AGG | - | tig0020612:81245-81264 | Msa1383790:intron | 40.0% | |
| CCAAAACTTCATTCAGGTAG+GGG | + | tig0020612:81337-81356 | None:intergenic | 40.0% | |
| GTTGTTACAGTCTTCTTCCA+TGG | - | tig0020612:82020-82039 | Msa1383790:CDS | 40.0% | |
| ATCTATTGCGTAGAACTCGT+TGG | - | tig0020612:82229-82248 | Msa1383790:CDS | 40.0% | |
| ! | TGAAATTGTGGGTTAATGGC+AGG | - | tig0020612:82301-82320 | Msa1383790:intron | 40.0% |
| ! | GGTGCTGTCAAGTATACTAA+AGG | - | tig0020612:82328-82347 | Msa1383790:intron | 40.0% |
| ACTAAAGGTCCTCAAAGACT+AGG | - | tig0020612:82343-82362 | Msa1383790:intron | 40.0% | |
| ACGAGGGACACATTATATCA+AGG | - | tig0020612:82536-82555 | Msa1383790:intron | 40.0% | |
| ! | AGGGCACTCTTAATACTGTT+TGG | + | tig0020612:82566-82585 | None:intergenic | 40.0% |
| CAAATGGATGTCCAGGAAAA+GGG | + | tig0020612:82635-82654 | None:intergenic | 40.0% | |
| ACAAATGGATGTCCAGGAAA+AGG | + | tig0020612:82636-82655 | None:intergenic | 40.0% | |
| CTCCTTCACTCATATCAAAG+CGG | - | tig0020612:82778-82797 | Msa1383790:intron | 40.0% | |
| TTCCGCTTTGATATGAGTGA+AGG | + | tig0020612:82783-82802 | None:intergenic | 40.0% | |
| ! | GATTTTTGTCCATACCTGTC+AGG | - | tig0020612:82876-82895 | Msa1383790:intron | 40.0% |
| !!! | TTTTTTTTTTCTCCCCGTGC+TGG | - | tig0020612:82908-82927 | Msa1383790:intron | 40.0% |
| ATTGTTAACAGGGCTCATCA+AGG | - | tig0020612:82998-83017 | Msa1383790:intron | 40.0% | |
| AAATAACAAGTGGAGTCAGC+AGG | - | tig0020612:83118-83137 | Msa1383790:intron | 40.0% | |
| CGTTACTGCAATGTCAAAAC+AGG | + | tig0020612:83173-83192 | None:intergenic | 40.0% | |
| TGACATTGCAGTAACGACTT+TGG | - | tig0020612:83177-83196 | Msa1383790:intron | 40.0% | |
| ! | CTGAACTTCAGTCTAAGATG+CGG | - | tig0020612:83388-83407 | Msa1383790:intron | 40.0% |
| AGACAGAAACAACAAGCCAT+TGG | - | tig0020612:83431-83450 | Msa1383790:intron | 40.0% | |
| GACAGAAACAACAAGCCATT+GGG | - | tig0020612:83432-83451 | Msa1383790:intron | 40.0% | |
| CTCAACTTTCTCCAGAAGAT+AGG | - | tig0020612:83457-83476 | Msa1383790:intron | 40.0% | |
| TAGAGGAGGTAATTTCAAGG+AGG | - | tig0020612:83487-83506 | Msa1383790:CDS | 40.0% | |
| !! | TCCTCACTTTTGCTAATTCC+CGG | + | tig0020612:83519-83538 | None:intergenic | 40.0% |
| TTCACCTGATAAGGAGTTCT+TGG | - | tig0020612:83599-83618 | Msa1383790:CDS | 40.0% | |
| TCACCTGATAAGGAGTTCTT+GGG | - | tig0020612:83600-83619 | Msa1383790:CDS | 40.0% | |
| AACGTTATAGTTGTGGTGGT+TGG | + | tig0020612:83640-83659 | None:intergenic | 40.0% | |
| CCAAAACGTTATAGTTGTGG+TGG | + | tig0020612:83644-83663 | None:intergenic | 40.0% | |
| ! | CCACCACAACTATAACGTTT+TGG | - | tig0020612:83641-83660 | Msa1383790:CDS | 40.0% |
| GCTGAGAATTTACGACTCTG+AGG | + | tig0020612:78078-78097 | None:intergenic | 45.0% | |
| GAGAGCAATGCAGAAGAACT+TGG | - | tig0020612:78245-78264 | Msa1383790:CDS | 45.0% | |
| AGCAATGCAGAAGAACTTGG+AGG | - | tig0020612:78248-78267 | Msa1383790:CDS | 45.0% | |
| GCAATGCAGAAGAACTTGGA+GGG | - | tig0020612:78249-78268 | Msa1383790:CDS | 45.0% | |
| ! | CTCTGGGAAGGTTCTTAAGA+AGG | - | tig0020612:78289-78308 | Msa1383790:CDS | 45.0% |
| CTATCCACTTCCGCTTCAAT+TGG | - | tig0020612:78410-78429 | Msa1383790:CDS | 45.0% | |
| ATCCACTTCCGCTTCAATTG+GGG | - | tig0020612:78412-78431 | Msa1383790:CDS | 45.0% | |
| CGCTTCAATTGGGGAAAAAC+AGG | - | tig0020612:78421-78440 | Msa1383790:CDS | 45.0% | |
| TTTAAATGACGCCCCACAAG+TGG | + | tig0020612:78738-78757 | None:intergenic | 45.0% | |
| GGTCTCAAGCTAACATCAGT+AGG | - | tig0020612:78846-78865 | Msa1383790:intron | 45.0% | |
| ATCAGTAGGCCAACCCAAAT+GGG | - | tig0020612:78860-78879 | Msa1383790:intron | 45.0% | |
| CTTTGTCTCTTGGGGTTACA+AGG | + | tig0020612:78977-78996 | None:intergenic | 45.0% | |
| ! | GTATCACTCAGTGCTGTTGA+AGG | - | tig0020612:79193-79212 | Msa1383790:intron | 45.0% |
| GCCATATGAACTAGCCATTG+CGG | - | tig0020612:79249-79268 | Msa1383790:intron | 45.0% | |
| CCTTCACAAGTTGTCTATCG+CGG | - | tig0020612:79298-79317 | Msa1383790:intron | 45.0% | |
| !! | ACTAGAGGCATTTGTATGGG+GGG | + | tig0020612:79454-79473 | None:intergenic | 45.0% |
| ! | CCACCACTGGTGTTTAACTT+TGG | + | tig0020612:79735-79754 | None:intergenic | 45.0% |
| CCAAAGTTAAACACCAGTGG+TGG | - | tig0020612:79732-79751 | Msa1383790:intron | 45.0% | |
| CATTCAGTTCCTCAAGAAGG+AGG | - | tig0020612:79866-79885 | Msa1383790:intron | 45.0% | |
| CTGAGATGGACAAAAGGTTC+TGG | - | tig0020612:79952-79971 | Msa1383790:intron | 45.0% | |
| ! | GATGTAGGTTGTGCCATTGT+GGG | + | tig0020612:80117-80136 | None:intergenic | 45.0% |
| AGATGCCGAAAAGACAATGC+AGG | - | tig0020612:80322-80341 | Msa1383790:intron | 45.0% | |
| CTCATAGCAAACCAGAAGCA+GGG | + | tig0020612:80583-80602 | None:intergenic | 45.0% | |
| ACTCATAGCAAACCAGAAGC+AGG | + | tig0020612:80584-80603 | None:intergenic | 45.0% | |
| CTGTCTTACAGTCTATCAGC+AGG | - | tig0020612:81076-81095 | Msa1383790:intron | 45.0% | |
| TCATTCAGGTAGGGGAACAT+GGG | + | tig0020612:81329-81348 | None:intergenic | 45.0% | |
| TTCATTCAGGTAGGGGAACA+TGG | + | tig0020612:81330-81349 | None:intergenic | 45.0% | |
| ! | CCCCTACCTGAATGAAGTTT+TGG | - | tig0020612:81334-81353 | Msa1383790:intron | 45.0% |
| GTGTAGCCGTGTATATCTTG+CGG | - | tig0020612:81363-81382 | Msa1383790:intron | 45.0% | |
| CAAGCAATTCGTGAGTTCCT+TGG | - | tig0020612:81508-81527 | Msa1383790:intron | 45.0% | |
| CGTGAGTTCCTTGGAAATCA+TGG | - | tig0020612:81517-81536 | Msa1383790:intron | 45.0% | |
| ATTGCGTAGAACTCGTTGGA+AGG | - | tig0020612:82233-82252 | Msa1383790:CDS | 45.0% | |
| AATGTGTCCCTCGTATTTGG+AGG | + | tig0020612:82530-82549 | None:intergenic | 45.0% | |
| !! | TTAAGAGTGCCCTTCCATCT+CGG | - | tig0020612:82573-82592 | Msa1383790:intron | 45.0% |
| !! | GAAATGGATTGCAACCGAGA+TGG | + | tig0020612:82590-82609 | None:intergenic | 45.0% |
| AGGGAGGTTATACCTCTTTC+TGG | + | tig0020612:82616-82635 | None:intergenic | 45.0% | |
| ! | AGGTATAACCTCCCTTTTCC+TGG | - | tig0020612:82621-82640 | Msa1383790:intron | 45.0% |
| TGCAAGACAAATGGATGTCC+AGG | + | tig0020612:82642-82661 | None:intergenic | 45.0% | |
| ATAACGCGTGAGCAATTGCA+GGG | + | tig0020612:82962-82981 | None:intergenic | 45.0% | |
| AATAACGCGTGAGCAATTGC+AGG | + | tig0020612:82963-82982 | None:intergenic | 45.0% | |
| !! | CTTTGGATGGGTTGGTGAAT+GGG | - | tig0020612:83021-83040 | Msa1383790:intron | 45.0% |
| TTGGTGAATGGGCAAACACA+AGG | - | tig0020612:83032-83051 | Msa1383790:intron | 45.0% | |
| ! | GCGAATTGGGTTGCTTTCTT+TGG | + | tig0020612:83214-83233 | None:intergenic | 45.0% |
| ! | AAAGTGTCTGGAGGCGAATT+GGG | + | tig0020612:83227-83246 | None:intergenic | 45.0% |
| ! | TAAAGTGTCTGGAGGCGAAT+TGG | + | tig0020612:83228-83247 | None:intergenic | 45.0% |
| ! | TATCGGCGTAGTAAAGTGTC+TGG | + | tig0020612:83239-83258 | None:intergenic | 45.0% |
| TGAAGTTCAGGTCTCTTGGA+AGG | + | tig0020612:83378-83397 | None:intergenic | 45.0% | |
| AGACTGAAGTTCAGGTCTCT+TGG | + | tig0020612:83382-83401 | None:intergenic | 45.0% | |
| CGCATCTTAGACTGAAGTTC+AGG | + | tig0020612:83390-83409 | None:intergenic | 45.0% | |
| GGAGAAAGTTGAGTTCCCAA+TGG | + | tig0020612:83450-83469 | None:intergenic | 45.0% | |
| AGGAGGTAATTTCAAGGAGG+AGG | - | tig0020612:83490-83509 | Msa1383790:CDS | 45.0% | |
| !! | CCTCACTTTTGCTAATTCCC+GGG | + | tig0020612:83518-83537 | None:intergenic | 45.0% |
| !!! | CAGCACTTTTGGTCTTGAGA+GGG | + | tig0020612:83575-83594 | None:intergenic | 45.0% |
| !! | CTCTCAAGACCAAAAGTGCT+GGG | - | tig0020612:83574-83593 | Msa1383790:CDS | 45.0% |
| GTACCCAAGAACTCCTTATC+AGG | + | tig0020612:83606-83625 | None:intergenic | 45.0% | |
| AATGGGAGCTGTTTGTTCGG+CGG | - | tig0020612:78214-78233 | Msa1383790:three_prime_UTR | 50.0% | |
| ! | CAATTTGGGGTTCTCTGGGA+AGG | - | tig0020612:78277-78296 | Msa1383790:CDS | 50.0% |
| TTCCCCAATTGAAGCGGAAG+TGG | + | tig0020612:78417-78436 | None:intergenic | 50.0% | |
| TCCACCGAAATTGCTACCGA+AGG | - | tig0020612:78785-78804 | Msa1383790:intron | 50.0% | |
| TCCTTCGGTAGCAATTTCGG+TGG | + | tig0020612:78789-78808 | None:intergenic | 50.0% | |
| CATCAGTAGGCCAACCCAAA+TGG | - | tig0020612:78859-78878 | Msa1383790:intron | 50.0% | |
| CAGGTCTAGTCGTTCTGTGT+TGG | - | tig0020612:79054-79073 | Msa1383790:intron | 50.0% | |
| ! | TCGTTCTGTGTTGGCCGATA+TGG | - | tig0020612:79063-79082 | Msa1383790:intron | 50.0% |
| CTAAAGCTCCCGCATAAGCA+GGG | + | tig0020612:79146-79165 | None:intergenic | 50.0% | |
| ACTAAAGCTCCCGCATAAGC+AGG | + | tig0020612:79147-79166 | None:intergenic | 50.0% | |
| ! | ATGCGGGAGCTTTAGTGCAA+TGG | - | tig0020612:79151-79170 | Msa1383790:intron | 50.0% |
| ! | GCCGCAATGGCTAGTTCATA+TGG | + | tig0020612:79253-79272 | None:intergenic | 50.0% |
| CCGCGATAGACAACTTGTGA+AGG | + | tig0020612:79301-79320 | None:intergenic | 50.0% | |
| TACCCCATGACATTCCACCA+TGG | - | tig0020612:79332-79351 | Msa1383790:CDS | 50.0% | |
| ! | AGGCCATGGTGGAATGTCAT+GGG | + | tig0020612:79338-79357 | None:intergenic | 50.0% |
| TTGTTAAACGGAGGCCATGG+TGG | + | tig0020612:79349-79368 | None:intergenic | 50.0% | |
| ! | GTGTTGTTAAACGGAGGCCA+TGG | + | tig0020612:79352-79371 | None:intergenic | 50.0% |
| TGGCCTCCGTTTAACAACAC+TGG | - | tig0020612:79352-79371 | Msa1383790:CDS | 50.0% | |
| ! | GCACCAGTGTTGTTAAACGG+AGG | + | tig0020612:79358-79377 | None:intergenic | 50.0% |
| AGCAGTAAGCCAGCAACTAG+AGG | + | tig0020612:79469-79488 | None:intergenic | 50.0% | |
| CATTGGCATGTTATGGCCTG+TGG | - | tig0020612:79574-79593 | Msa1383790:CDS | 50.0% | |
| GGGTAAAGCTAGCTATAGGG+CGG | - | tig0020612:79677-79696 | Msa1383790:intron | 50.0% | |
| TAAAGCTAGCTATAGGGCGG+TGG | - | tig0020612:79680-79699 | Msa1383790:intron | 50.0% | |
| TCTCTGGCAAGCTTTCCAGA+GGG | - | tig0020612:79760-79779 | Msa1383790:intron | 50.0% | |
| ! | CGATGTAGGTTGTGCCATTG+TGG | + | tig0020612:80118-80137 | None:intergenic | 50.0% |
| CTGCAGCCGCAAGATATACA+CGG | + | tig0020612:81372-81391 | None:intergenic | 50.0% | |
| AGAAGGAATGTGGGCAACAG+AGG | + | tig0020612:81667-81686 | None:intergenic | 50.0% | |
| ! | TGTGGGTTAATGGCAGGTAC+TGG | - | tig0020612:82307-82326 | Msa1383790:intron | 50.0% |
| ! | CCAGCTTCACCTAGTCTTTG+AGG | + | tig0020612:82355-82374 | None:intergenic | 50.0% |
| CCTCAAAGACTAGGTGAAGC+TGG | - | tig0020612:82352-82371 | Msa1383790:intron | 50.0% | |
| TATTTGGAGGAAGGGAGGCT+GGG | + | tig0020612:82517-82536 | None:intergenic | 50.0% | |
| CTCCCTTCCTCCAAATACGA+GGG | - | tig0020612:82520-82539 | Msa1383790:intron | 50.0% | |
| GTCCCTCGTATTTGGAGGAA+GGG | + | tig0020612:82525-82544 | None:intergenic | 50.0% | |
| TGTCCCTCGTATTTGGAGGA+AGG | + | tig0020612:82526-82545 | None:intergenic | 50.0% | |
| GGATTGCAACCGAGATGGAA+GGG | + | tig0020612:82585-82604 | None:intergenic | 50.0% | |
| TGGATTGCAACCGAGATGGA+AGG | + | tig0020612:82586-82605 | None:intergenic | 50.0% | |
| ATGGATGTCCAGGAAAAGGG+AGG | + | tig0020612:82632-82651 | None:intergenic | 50.0% | |
| TCAGTGGCTCGTACCATTTG+CGG | - | tig0020612:82817-82836 | Msa1383790:intron | 50.0% | |
| TACGAAAACAAGGCCAGCAC+GGG | + | tig0020612:82924-82943 | None:intergenic | 50.0% | |
| CTACGAAAACAAGGCCAGCA+CGG | + | tig0020612:82925-82944 | None:intergenic | 50.0% | |
| AACAGGGCTCATCAAGGCTT+TGG | - | tig0020612:83004-83023 | Msa1383790:intron | 50.0% | |
| !! | GGCTCATCAAGGCTTTGGAT+GGG | - | tig0020612:83009-83028 | Msa1383790:intron | 50.0% |
| !! | CATCAAGGCTTTGGATGGGT+TGG | - | tig0020612:83013-83032 | Msa1383790:intron | 50.0% |
| !! | GCTTTGGATGGGTTGGTGAA+TGG | - | tig0020612:83020-83039 | Msa1383790:intron | 50.0% |
| GATCCAGACAAAATGCCTCG+AGG | - | tig0020612:83325-83344 | Msa1383790:intron | 50.0% | |
| ACAAAATGCCTCGAGGCCAA+TGG | - | tig0020612:83332-83351 | Msa1383790:intron | 50.0% | |
| AGTTCAGGTCTCTTGGAAGG+AGG | + | tig0020612:83375-83394 | None:intergenic | 50.0% | |
| AATTTCAAGGAGGAGGAGCC+CGG | - | tig0020612:83497-83516 | Msa1383790:CDS | 50.0% | |
| CCCGGGAATTAGCAAAAGTG+AGG | - | tig0020612:83515-83534 | Msa1383790:CDS | 50.0% | |
| CTGCCAAGAAAACTCATGCC+AGG | - | tig0020612:83547-83566 | Msa1383790:CDS | 50.0% | |
| ! | GTGCCTGGCATGAGTTTTCT+TGG | + | tig0020612:83553-83572 | None:intergenic | 50.0% |
| !!! | CCAGCACTTTTGGTCTTGAG+AGG | + | tig0020612:83576-83595 | None:intergenic | 50.0% |
| ! | CCTCTCAAGACCAAAAGTGC+TGG | - | tig0020612:83573-83592 | Msa1383790:CDS | 50.0% |
| ! | AGGTGAACTCCCAGCACTTT+TGG | + | tig0020612:83586-83605 | None:intergenic | 50.0% |
| TGCTGGGAGTTCACCTGATA+AGG | - | tig0020612:83590-83609 | Msa1383790:CDS | 50.0% | |
| ATGGGAGCTGTTTGTTCGGC+GGG | - | tig0020612:78215-78234 | Msa1383790:three_prime_UTR | 55.0% | |
| !! | GACGGTGGGATCGGATTAGT+CGG | + | tig0020612:78716-78735 | None:intergenic | 55.0% |
| AATGACGCCCCACAAGTGGA+CGG | + | tig0020612:78734-78753 | None:intergenic | 55.0% | |
| ! | GGCCATGGTGGAATGTCATG+GGG | + | tig0020612:79337-79356 | None:intergenic | 55.0% |
| ! | GAGGCCATGGTGGAATGTCA+TGG | + | tig0020612:79339-79358 | None:intergenic | 55.0% |
| TGGCATGTTATGGCCTGTGG+TGG | - | tig0020612:79577-79596 | Msa1383790:CDS | 55.0% | |
| !! | ACCAGTGGTGGGTTTGTCTC+TGG | - | tig0020612:79744-79763 | Msa1383790:intron | 55.0% |
| GTCTCTGGCAAGCTTTCCAG+AGG | - | tig0020612:79759-79778 | Msa1383790:intron | 55.0% | |
| CAGGTAGGGGAACATGGGAA+GGG | + | tig0020612:81324-81343 | None:intergenic | 55.0% | |
| TCAGGTAGGGGAACATGGGA+AGG | + | tig0020612:81325-81344 | None:intergenic | 55.0% | |
| GGAATGTGGGCAACAGAGGT+AGG | + | tig0020612:81663-81682 | None:intergenic | 55.0% | |
| GTATTTGGAGGAAGGGAGGC+TGG | + | tig0020612:82518-82537 | None:intergenic | 55.0% | |
| CCTCGTATTTGGAGGAAGGG+AGG | + | tig0020612:82522-82541 | None:intergenic | 55.0% | |
| CCTCCCTTCCTCCAAATACG+AGG | - | tig0020612:82519-82538 | Msa1383790:intron | 55.0% | |
| ACGAAAACAAGGCCAGCACG+GGG | + | tig0020612:82923-82942 | None:intergenic | 55.0% | |
| !!! | GCTGGCCTTGTTTTCGTAGC+TGG | - | tig0020612:82926-82945 | Msa1383790:intron | 55.0% |
| !! | GGGCTCATCAAGGCTTTGGA+TGG | - | tig0020612:83008-83027 | Msa1383790:intron | 55.0% |
| ! | CGGCGTAGTAAAGTGTCTGG+AGG | + | tig0020612:83236-83255 | None:intergenic | 55.0% |
| !! | TGGCCTCGAGGCATTTTGTC+TGG | + | tig0020612:83331-83350 | None:intergenic | 55.0% |
| TTGGAAGGAGGAGACCGTGT+GGG | + | tig0020612:83363-83382 | None:intergenic | 55.0% | |
| ATTTCAAGGAGGAGGAGCCC+GGG | - | tig0020612:83498-83517 | Msa1383790:CDS | 55.0% | |
| !! | TTTGGTCTTGAGAGGGTGCC+TGG | + | tig0020612:83568-83587 | None:intergenic | 55.0% |
| TGGGAGCTGTTTGTTCGGCG+GGG | - | tig0020612:78216-78235 | Msa1383790:exon | 60.0% | |
| AGCTGTTTGTTCGGCGGGGA+TGG | - | tig0020612:78220-78239 | Msa1383790:exon | 60.0% | |
| GCTGTTTGTTCGGCGGGGAT+GGG | - | tig0020612:78221-78240 | Msa1383790:exon | 60.0% | |
| CTGTTTGTTCGGCGGGGATG+GGG | - | tig0020612:78222-78241 | Msa1383790:exon | 60.0% | |
| TGTTTGTTCGGCGGGGATGG+GGG | - | tig0020612:78223-78242 | Msa1383790:exon | 60.0% | |
| CCACAAGTGGACGGTGGGAT+CGG | + | tig0020612:78725-78744 | None:intergenic | 60.0% | |
| CGATCCCACCGTCCACTTGT+GGG | - | tig0020612:78723-78742 | Msa1383790:intron | 60.0% | |
| GATCCCACCGTCCACTTGTG+GGG | - | tig0020612:78724-78743 | Msa1383790:intron | 60.0% | |
| ACTTTGCTGGGACCCCTTCC+CGG | - | tig0020612:79119-79138 | Msa1383790:CDS | 60.0% | |
| CATAAGCAGGGTCCGGGAAG+GGG | + | tig0020612:79134-79153 | None:intergenic | 60.0% | |
| GCATAAGCAGGGTCCGGGAA+GGG | + | tig0020612:79135-79154 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGCTTATG+CGG | - | tig0020612:79134-79153 | Msa1383790:intron | 60.0% | |
| TTCCCGGACCCTGCTTATGC+GGG | - | tig0020612:79135-79154 | Msa1383790:intron | 60.0% | |
| GAACTAGCCATTGCGGCCCA+TGG | - | tig0020612:79256-79275 | Msa1383790:intron | 60.0% | |
| TGAAGGAACGCCCGCCATTG+TGG | + | tig0020612:79284-79303 | None:intergenic | 60.0% | |
| GCCAGAGACAAACCCACCAC+TGG | + | tig0020612:79748-79767 | None:intergenic | 60.0% | |
| GGCCAATGGCAATGCCCACA+CGG | - | tig0020612:83346-83365 | Msa1383790:intron | 60.0% | |
| ! | GACCGTGTGGGCATTGCCAT+TGG | + | tig0020612:83351-83370 | None:intergenic | 60.0% |
| CTTGGAAGGAGGAGACCGTG+TGG | + | tig0020612:83364-83383 | None:intergenic | 60.0% | |
| GTGGTGGTTGGCGATGAGTG+TGG | + | tig0020612:83628-83647 | None:intergenic | 60.0% | |
| CCGATCCCACCGTCCACTTG+TGG | - | tig0020612:78722-78741 | Msa1383790:intron | 65.0% | |
| ACGCCCCACAAGTGGACGGT+GGG | + | tig0020612:78730-78749 | None:intergenic | 65.0% | |
| GGGAAGGGGTCCCAGCAAAG+TGG | + | tig0020612:79120-79139 | None:intergenic | 65.0% | |
| CGCATAAGCAGGGTCCGGGA+AGG | + | tig0020612:79136-79155 | None:intergenic | 65.0% | |
| CTCCCGCATAAGCAGGGTCC+GGG | + | tig0020612:79140-79159 | None:intergenic | 65.0% | |
| GCTCCCGCATAAGCAGGGTC+CGG | + | tig0020612:79141-79160 | None:intergenic | 65.0% | |
| !! | TGTGGTGCCATGGGCCGCAA+TGG | + | tig0020612:79266-79285 | None:intergenic | 65.0% |
| TGCGGCCCATGGCACCACAA+TGG | - | tig0020612:79267-79286 | Msa1383790:intron | 65.0% | |
| GGCCCATGGCACCACAATGG+CGG | - | tig0020612:79270-79289 | Msa1383790:intron | 65.0% | |
| GCCCATGGCACCACAATGGC+GGG | - | tig0020612:79271-79290 | Msa1383790:intron | 65.0% | |
| !! | GCCCGCCATTGTGGTGCCAT+GGG | + | tig0020612:79275-79294 | None:intergenic | 65.0% |
| ! | GGGCATTGCCATTGGCCTCG+AGG | + | tig0020612:83343-83362 | None:intergenic | 65.0% |
| GACGCCCCACAAGTGGACGG+TGG | + | tig0020612:78731-78750 | None:intergenic | 70.0% | |
| ! | CGCCCGCCATTGTGGTGCCA+TGG | + | tig0020612:79276-79295 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020612 | gene | 78065 | 83859 | 78065 | ID=Msa1383790;Name=Msa1383790 |
| tig0020612 | mRNA | 78065 | 83859 | 78065 | ID=Msa1383790-mRNA-1;Parent=Msa1383790;Name=Msa1383790-mRNA-1;_AED=0.13;_eAED=0.13;_QI=150|1|1|1|1|1|12|170|608 |
| tig0020612 | exon | 78065 | 78736 | 78065 | ID=Msa1383790-mRNA-1:exon:8805;Parent=Msa1383790-mRNA-1 |
| tig0020612 | exon | 78871 | 78915 | 78871 | ID=Msa1383790-mRNA-1:exon:8804;Parent=Msa1383790-mRNA-1 |
| tig0020612 | exon | 79072 | 79148 | 79072 | ID=Msa1383790-mRNA-1:exon:8803;Parent=Msa1383790-mRNA-1 |
| tig0020612 | exon | 79302 | 79418 | 79302 | ID=Msa1383790-mRNA-1:exon:8802;Parent=Msa1383790-mRNA-1 |
| tig0020612 | exon | 79504 | 79601 | 79504 | ID=Msa1383790-mRNA-1:exon:8801;Parent=Msa1383790-mRNA-1 |
| tig0020612 | exon | 80386 | 80455 | 80386 | ID=Msa1383790-mRNA-1:exon:8800;Parent=Msa1383790-mRNA-1 |
| tig0020612 | exon | 80658 | 80755 | 80658 | ID=Msa1383790-mRNA-1:exon:8799;Parent=Msa1383790-mRNA-1 |
| tig0020612 | exon | 81143 | 81236 | 81143 | ID=Msa1383790-mRNA-1:exon:8798;Parent=Msa1383790-mRNA-1 |
| tig0020612 | exon | 81551 | 81641 | 81551 | ID=Msa1383790-mRNA-1:exon:8797;Parent=Msa1383790-mRNA-1 |
| tig0020612 | exon | 81775 | 81867 | 81775 | ID=Msa1383790-mRNA-1:exon:8796;Parent=Msa1383790-mRNA-1 |
| tig0020612 | exon | 81957 | 82270 | 81957 | ID=Msa1383790-mRNA-1:exon:8795;Parent=Msa1383790-mRNA-1 |
| tig0020612 | exon | 83482 | 83859 | 83482 | ID=Msa1383790-mRNA-1:exon:8794;Parent=Msa1383790-mRNA-1 |
| tig0020612 | five_prime_UTR | 83710 | 83859 | 83710 | ID=Msa1383790-mRNA-1:five_prime_utr;Parent=Msa1383790-mRNA-1 |
| tig0020612 | CDS | 83482 | 83709 | 83482 | ID=Msa1383790-mRNA-1:cds;Parent=Msa1383790-mRNA-1 |
| tig0020612 | CDS | 81957 | 82270 | 81957 | ID=Msa1383790-mRNA-1:cds;Parent=Msa1383790-mRNA-1 |
| tig0020612 | CDS | 81775 | 81867 | 81775 | ID=Msa1383790-mRNA-1:cds;Parent=Msa1383790-mRNA-1 |
| tig0020612 | CDS | 81551 | 81641 | 81551 | ID=Msa1383790-mRNA-1:cds;Parent=Msa1383790-mRNA-1 |
| tig0020612 | CDS | 81143 | 81236 | 81143 | ID=Msa1383790-mRNA-1:cds;Parent=Msa1383790-mRNA-1 |
| tig0020612 | CDS | 80658 | 80755 | 80658 | ID=Msa1383790-mRNA-1:cds;Parent=Msa1383790-mRNA-1 |
| tig0020612 | CDS | 80386 | 80455 | 80386 | ID=Msa1383790-mRNA-1:cds;Parent=Msa1383790-mRNA-1 |
| tig0020612 | CDS | 79504 | 79601 | 79504 | ID=Msa1383790-mRNA-1:cds;Parent=Msa1383790-mRNA-1 |
| tig0020612 | CDS | 79302 | 79418 | 79302 | ID=Msa1383790-mRNA-1:cds;Parent=Msa1383790-mRNA-1 |
| tig0020612 | CDS | 79072 | 79148 | 79072 | ID=Msa1383790-mRNA-1:cds;Parent=Msa1383790-mRNA-1 |
| tig0020612 | CDS | 78871 | 78915 | 78871 | ID=Msa1383790-mRNA-1:cds;Parent=Msa1383790-mRNA-1 |
| tig0020612 | CDS | 78235 | 78736 | 78235 | ID=Msa1383790-mRNA-1:cds;Parent=Msa1383790-mRNA-1 |
| tig0020612 | three_prime_UTR | 78065 | 78234 | 78065 | ID=Msa1383790-mRNA-1:three_prime_utr;Parent=Msa1383790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
