AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1165980

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1165980 MtrunA17_Chr7g0269231 98.462 260 1 1 1 257 1 260 0.0 525
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1165980 AT1G02880.3 68.750 256 78 1 1 256 4 257 1.35e-133 378
Msa1165980 AT1G02880.2 68.750 256 78 1 1 256 1 254 1.52e-133 377
Msa1165980 AT2G44750.2 67.969 256 79 1 1 256 5 257 1.37e-132 375
Msa1165980 AT1G02880.6 67.176 262 78 2 1 256 4 263 6.01e-131 371
Msa1165980 AT2G44750.1 67.578 256 78 2 1 256 5 255 2.37e-130 369
Msa1165980 AT1G02880.5 73.889 180 47 0 77 256 8 187 7.08e-96 280
Msa1165980 AT1G02880.1 73.889 180 47 0 77 256 8 187 7.08e-96 280
Msa1165980 AT1G02880.4 72.941 170 46 0 87 256 1 170 3.31e-88 259

Find 87 sgRNAs with CRISPR-Local

Find 315 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATTTACTGTACAAATTA+TGG 0.096100 7_4:-58013259 Msa1165980:three_prime_UTR
ACCTCTGATTTATCAGTATT+TGG 0.123339 7_4:+58014519 None:intergenic
CTTCCATTATTATTGGTTAT+TGG 0.154032 7_4:+58013193 None:intergenic
TCCTGAACTTCCATTATTAT+TGG 0.161699 7_4:+58013186 None:intergenic
CCAAAGCAAAGGAGCGAATT+TGG 0.179692 7_4:+58017152 None:intergenic
ATGGGTCTTATTCCATTTAA+AGG 0.209884 7_4:-58013347 Msa1165980:three_prime_UTR
TTCCATTATTATTGGTTATT+GGG 0.226514 7_4:+58013194 None:intergenic
TTCCATGTCCATTAATTAGA+TGG 0.243974 7_4:-58013366 Msa1165980:three_prime_UTR
AAGGGAGTTATTCATTGATT+TGG 0.251535 7_4:-58013228 Msa1165980:three_prime_UTR
TACGAACATGAGAAGGATTT+TGG 0.259220 7_4:+58016955 None:intergenic
CCAAATTCGCTCCTTTGCTT+TGG 0.262944 7_4:-58017152 Msa1165980:CDS
CAAATTCGCTCCTTTGCTTT+GGG 0.270102 7_4:-58017151 Msa1165980:CDS
AAAAGGTTGTAGTGAGGTTT+TGG 0.270539 7_4:-58017317 Msa1165980:five_prime_UTR
AGTCTGATTCAGATCTTCTT+TGG 0.283649 7_4:-58013451 Msa1165980:CDS
AGCACATCAAATATTGTAAA+AGG 0.285187 7_4:-58013491 Msa1165980:CDS
AAGAAAGTCTGGCCTTTAAA+TGG 0.287584 7_4:+58013335 None:intergenic
AATAAGACCCATCTAATTAA+TGG 0.291612 7_4:+58013358 None:intergenic
ACCAATAATAATGGAAGTTC+AGG 0.301165 7_4:-58013187 Msa1165980:three_prime_UTR
ATTTATCAGTATTTGGTATA+AGG 0.310511 7_4:+58014526 None:intergenic
ATTAATGGACATGGAAGATA+TGG 0.317023 7_4:+58013373 None:intergenic
TCATTTACTGTACAAATTAT+GGG 0.320724 7_4:-58013258 Msa1165980:three_prime_UTR
CATTGTGGACTCGTTCCTAT+TGG 0.325599 7_4:-58014010 Msa1165980:CDS
AGGGAGTTATTCATTGATTT+GGG 0.339085 7_4:-58013227 Msa1165980:three_prime_UTR
TTCCCAATAACCAATAATAA+TGG 0.344674 7_4:-58013196 Msa1165980:three_prime_UTR
TCCTGTGGTTGTAGAACTTC+CGG 0.357660 7_4:+58013979 None:intergenic
CAAAGCAAAGGAGCGAATTT+GGG 0.363044 7_4:+58017153 None:intergenic
CAGCTATGCATTCTTGCTGT+TGG 0.376459 7_4:-58014193 Msa1165980:CDS
GGGAGATTTGATCACGAGAT+TGG 0.378181 7_4:-58014160 Msa1165980:CDS
GAGGACACAGAGATGAGATT+TGG 0.378288 7_4:-58013524 Msa1165980:CDS
ATGTCACCTTTGATTGCATC+AGG 0.379819 7_4:+58014861 None:intergenic
ATTCTTGCTGTTGGAGCACT+TGG 0.384460 7_4:-58014184 Msa1165980:CDS
ACGGAAGAAGAAGAAGTTTC+CGG 0.385489 7_4:+58017216 None:intergenic
ATTGTGGACTCGTTCCTATT+GGG 0.388599 7_4:-58014009 Msa1165980:CDS
TATTCGGCTTATTACATGAA+TGG 0.392673 7_4:+58013114 None:intergenic
CTTCCGGATGGCATCCCAAT+AGG 0.427717 7_4:+58013995 None:intergenic
CATATACGAGTTTGCGCTGA+TGG 0.437248 7_4:-58017023 Msa1165980:CDS
GTTGGTTTCGTACCTGTGTT+TGG 0.439797 7_4:+58017474 None:intergenic
CTTGCTGTTGGAGCACTTGG+TGG 0.445518 7_4:-58014181 Msa1165980:CDS
ATCTTATGCGAGTAATTCTT+CGG 0.450082 7_4:+58014061 None:intergenic
TACATGTTGCATACTGCACC+TGG 0.452863 7_4:-58013400 Msa1165980:three_prime_UTR
ACAAATTATGGGAGGGTGAA+AGG 0.460413 7_4:-58013247 Msa1165980:three_prime_UTR
GAAGAGAAGCATCAATCGTT+AGG 0.460768 7_4:-58017283 Msa1165980:five_prime_UTR
TGAGGCAATCATCAGATAGA+AGG 0.467880 7_4:+58014095 None:intergenic
AACAAATTTACAATTAGTAG+CGG 0.472580 7_4:-58017449 Msa1165980:five_prime_UTR
CAAATTATGGGAGGGTGAAA+GGG 0.475106 7_4:-58013246 Msa1165980:three_prime_UTR
AATTTCTATCAAGAAGCTCT+AGG 0.492838 7_4:-58013426 Msa1165980:exon
AAGGTGACATGGATTCAATC+AGG 0.496191 7_4:-58014848 Msa1165980:CDS
AATTGACGAGTCTCAAGATC+AGG 0.499779 7_4:-58014589 Msa1165980:CDS
GTTCCTATTGGGATGCCATC+CGG 0.507989 7_4:-58013998 Msa1165980:CDS
TCCATGTCCATTAATTAGAT+GGG 0.518703 7_4:-58013365 Msa1165980:three_prime_UTR
TTCATTCAATCTTCTGTCGA+GGG 0.519105 7_4:-58014037 Msa1165980:CDS
GACACAGAGATGAGATTTGG+CGG 0.521420 7_4:-58013521 Msa1165980:CDS
ATCCTTCTCATGTTCGTACC+AGG 0.523054 7_4:-58016950 Msa1165980:intron
CATGGAAGATATGGAAAGCC+AGG 0.523067 7_4:+58013382 None:intergenic
CATCAATCGTTAGGATAGGA+TGG 0.529835 7_4:-58017274 Msa1165980:exon
TTGCTGTTGGAGCACTTGGT+GGG 0.532035 7_4:-58014180 Msa1165980:CDS
CTTCATTCAATCTTCTGTCG+AGG 0.535339 7_4:-58014038 Msa1165980:CDS
ACAAATTTACAATTAGTAGC+GGG 0.545015 7_4:-58017448 Msa1165980:five_prime_UTR
GCTCCTTTGCTTTGGGACCA+CGG 0.545810 7_4:-58017144 Msa1165980:intron
TCTTCGGAAGAAGTTGAATG+AGG 0.557423 7_4:+58014077 None:intergenic
TAGAAGGATAATGCGCGTGT+TGG 0.565349 7_4:+58014111 None:intergenic
GAAGCATCAATCGTTAGGAT+AGG 0.569437 7_4:-58017278 Msa1165980:five_prime_UTR
TCCGGAAGTTCTACAACCAC+AGG 0.570611 7_4:-58013980 Msa1165980:CDS
ACCCATCTAATTAATGGACA+TGG 0.570935 7_4:+58013364 None:intergenic
AATACTTACTGAGGTCCCAC+TGG 0.575667 7_4:+58013954 None:intergenic
CATTTCATCATACACACGGT+TGG 0.576112 7_4:+58016995 None:intergenic
TTTACTGTACAAATTATGGG+AGG 0.587647 7_4:-58013255 Msa1165980:three_prime_UTR
TGATGCAATCAAAGGTGACA+TGG 0.600849 7_4:-58014859 Msa1165980:CDS
ACTTGATTTCTATGCAAACC+TGG 0.601776 7_4:-58014817 Msa1165980:intron
ACCAAATACTGATAAATCAG+AGG 0.604378 7_4:-58014520 Msa1165980:intron
AAGAGCGTATGTCAGAGAAA+CGG 0.605988 7_4:+58017197 None:intergenic
ATACCGTGGTCCCAAAGCAA+AGG 0.614254 7_4:+58017141 None:intergenic
TACAAGCCTGATGCAATCAA+AGG 0.623735 7_4:-58014867 Msa1165980:CDS
TACCTGGTACGAACATGAGA+AGG 0.628823 7_4:+58016948 None:intergenic
AGTAAAAGAAACATAAACAA+AGG 0.633072 7_4:+58013283 None:intergenic
ATACGAGTTTGCGCTGATGG+AGG 0.633325 7_4:-58017020 Msa1165980:CDS
TCTGTCGAGGGTCCACATTG+TGG 0.635034 7_4:-58014025 Msa1165980:CDS
GAGGTCCCACTGGAGTCCTG+TGG 0.635982 7_4:+58013964 None:intergenic
TTACTGTACAAATTATGGGA+GGG 0.636161 7_4:-58013254 Msa1165980:three_prime_UTR
CTTTATCATTGACCAAACAC+AGG 0.643382 7_4:-58017486 Msa1165980:five_prime_UTR
CTACAACCACAGGACTCCAG+TGG 0.662065 7_4:-58013970 Msa1165980:CDS
TACAACCACAGGACTCCAGT+GGG 0.664787 7_4:-58013969 Msa1165980:CDS
AACACATTTGTGTAAATCTG+TGG 0.677485 7_4:+58014563 None:intergenic
GTGGTTGTAGAACTTCCGGA+TGG 0.690304 7_4:+58013983 None:intergenic
GAGGCATTTCATCATACACA+CGG 0.695989 7_4:+58016991 None:intergenic
GAAGAAGAAGAAGTTTCCGG+TGG 0.697049 7_4:+58017219 None:intergenic
ATAGGAACGAGTCCACAATG+TGG 0.758602 7_4:+58014013 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATATGTTAAAAAATAAG+AGG - chr7_4:58013203-58013222 Msa1165980:three_prime_UTR 10.0%
!! ATATCTTATAATATAAAAGA+GGG + chr7_4:58013499-58013518 None:intergenic 10.0%
!! TATATCTTATAATATAAAAG+AGG + chr7_4:58013500-58013519 None:intergenic 10.0%
!!! TAATTGTAAATTTGTTTTGT+TGG + chr7_4:58013128-58013147 None:intergenic 15.0%
!! ATAAATAAATAACGCAAAAA+AGG - chr7_4:58013247-58013266 Msa1165980:three_prime_UTR 15.0%
!! TATCTTATAATATAAAAGAG+GGG + chr7_4:58013498-58013517 None:intergenic 15.0%
!!! AAAAAATGATTATCATTTTG+TGG + chr7_4:58013797-58013816 None:intergenic 15.0%
!!! TTGTGTTAATTGTTTTATTT+AGG - chr7_4:58014039-58014058 Msa1165980:CDS 15.0%
!!! TGTGTTAATTGTTTTATTTA+GGG - chr7_4:58014040-58014059 Msa1165980:CDS 15.0%
!! AGTTACATATCTTTAATATT+TGG + chr7_4:58014556-58014575 None:intergenic 15.0%
!! TCTAGTATTAAATTTATTAG+TGG + chr7_4:58014820-58014839 None:intergenic 15.0%
!! TATTCATAATATGAAACAAA+AGG - chr7_4:58014901-58014920 Msa1165980:intron 15.0%
!! ATTCATAATATGAAACAAAA+GGG - chr7_4:58014902-58014921 Msa1165980:intron 15.0%
!!! GTTATTGTTTTACTATTTAT+AGG - chr7_4:58014973-58014992 Msa1165980:intron 15.0%
!! AGATAAAATGATTTATGTTT+GGG + chr7_4:58015433-58015452 None:intergenic 15.0%
!! AAGATAAAATGATTTATGTT+TGG + chr7_4:58015434-58015453 None:intergenic 15.0%
!! AAAACATAAAGATATAGATA+GGG + chr7_4:58015797-58015816 None:intergenic 15.0%
!! AAAAACATAAAGATATAGAT+AGG + chr7_4:58015798-58015817 None:intergenic 15.0%
!! AACAAATTTACAATTAGTAG+CGG - chr7_4:58013132-58013151 Msa1165980:three_prime_UTR 20.0%
!! ATATGTTAAAAAATAAGAGG+AGG - chr7_4:58013206-58013225 Msa1165980:three_prime_UTR 20.0%
!! ACTAATTAGGTATAACTATA+AGG - chr7_4:58013875-58013894 Msa1165980:intron 20.0%
!! TTTGTAAAAAATAGCAACTT+TGG + chr7_4:58013955-58013974 None:intergenic 20.0%
!!! GTGTTAATTGTTTTATTTAG+GGG - chr7_4:58014041-58014060 Msa1165980:CDS 20.0%
!! TTTGAGTAAAATAGCAAAAA+TGG - chr7_4:58014174-58014193 Msa1165980:CDS 20.0%
!!! AAAAATGGTGATGTTTAAAA+TGG - chr7_4:58014189-58014208 Msa1165980:CDS 20.0%
!!! TCAAACTTAAGTAATTTTTC+TGG - chr7_4:58014452-58014471 Msa1165980:intron 20.0%
!! TTGTATATTTATGCTAATGA+TGG - chr7_4:58014530-58014549 Msa1165980:CDS 20.0%
!!! GTATTTCTTTTTGAATAGTA+TGG + chr7_4:58014845-58014864 None:intergenic 20.0%
!! TTGTACTAGTTGTATATAAT+TGG + chr7_4:58014953-58014972 None:intergenic 20.0%
!!! TCTTTATACATTATTGCTTT+TGG - chr7_4:58015164-58015183 Msa1165980:intron 20.0%
!!! CTTTATACATTATTGCTTTT+GGG - chr7_4:58015165-58015184 Msa1165980:intron 20.0%
!!! AATTGATTTTGGTATGTTAA+GGG - chr7_4:58015300-58015319 Msa1165980:intron 20.0%
!! ATGCAAAATCAATTCTAATT+AGG + chr7_4:58015327-58015346 None:intergenic 20.0%
!! GATAAAATGATTTATGTTTG+GGG + chr7_4:58015432-58015451 None:intergenic 20.0%
!!! TGATTTTGCATAATTGATTT+TGG + chr7_4:58015471-58015490 None:intergenic 20.0%
!!! CAATTATGCAAAATCAATTT+TGG - chr7_4:58015475-58015494 Msa1165980:intron 20.0%
!! TGGAGGATTATAAATTATAA+TGG - chr7_4:58015534-58015553 Msa1165980:intron 20.0%
!! ATTTATCAGTATTTGGTATA+AGG + chr7_4:58016058-58016077 None:intergenic 20.0%
!!! CTTTATTATTGAATTTTGCA+AGG - chr7_4:58016105-58016124 Msa1165980:intron 20.0%
!! AAGAATAAAAATAATGCATC+TGG + chr7_4:58016733-58016752 None:intergenic 20.0%
!! AGTTTATTTAGTTACTCATA+AGG + chr7_4:58016807-58016826 None:intergenic 20.0%
!! AGTAAAAGAAACATAAACAA+AGG + chr7_4:58017301-58017320 None:intergenic 20.0%
!! TTCATTTACTGTACAAATTA+TGG - chr7_4:58017322-58017341 Msa1165980:five_prime_UTR 20.0%
!! TCATTTACTGTACAAATTAT+GGG - chr7_4:58017323-58017342 Msa1165980:five_prime_UTR 20.0%
!!! TTCCATTATTATTGGTTATT+GGG + chr7_4:58017390-58017409 None:intergenic 20.0%
! ACAAATTTACAATTAGTAGC+GGG - chr7_4:58013133-58013152 Msa1165980:three_prime_UTR 25.0%
! AGATGATTCATGTATGTTAT+TGG - chr7_4:58013520-58013539 Msa1165980:CDS 25.0%
! GAAAAAAAAAAAGTTGTACC+TGG + chr7_4:58013652-58013671 None:intergenic 25.0%
!! ATGATTATCATTTTGTGGAT+AGG + chr7_4:58013792-58013811 None:intergenic 25.0%
!! CTATTCAATTAGTTTCTTGA+AGG - chr7_4:58013927-58013946 Msa1165980:intron 25.0%
! TCTACATTACGTATTATATG+TGG - chr7_4:58013979-58013998 Msa1165980:CDS 25.0%
! CTACATTACGTATTATATGT+GGG - chr7_4:58013980-58013999 Msa1165980:CDS 25.0%
! TACATTACGTATTATATGTG+GGG - chr7_4:58013981-58014000 Msa1165980:CDS 25.0%
! AGGGGTAATAAAATTAGAAA+AGG - chr7_4:58014059-58014078 Msa1165980:CDS 25.0%
! GTCAATCAGTAATTAAGTAA+TGG + chr7_4:58014347-58014366 None:intergenic 25.0%
!! AACTTAAGTAATTTTTCTGG+AGG - chr7_4:58014455-58014474 Msa1165980:intron 25.0%
! GTGAACTGAAAACATAAATA+AGG + chr7_4:58014590-58014609 None:intergenic 25.0%
!!! ACTTCATTTTTTGCTATACA+TGG - chr7_4:58014686-58014705 Msa1165980:intron 25.0%
!! GAAATTTTGAGCAATGTTTA+AGG + chr7_4:58014875-58014894 None:intergenic 25.0%
! ATATAATCTGTTGTCAATAG+CGG + chr7_4:58015086-58015105 None:intergenic 25.0%
! GACAACAGATTATATATAAG+TGG - chr7_4:58015091-58015110 Msa1165980:intron 25.0%
! AACAATATCTTTCAATGTGT+TGG - chr7_4:58015118-58015137 Msa1165980:intron 25.0%
! ACATGTACAAAATAGACATT+AGG + chr7_4:58015235-58015254 None:intergenic 25.0%
!!! GAATTGATTTTGGTATGTTA+AGG - chr7_4:58015299-58015318 Msa1165980:intron 25.0%
!! ATCGATTCTAACTTAAAGTT+CGG - chr7_4:58015352-58015371 Msa1165980:intron 25.0%
!!! AGTACTTGTTTTAGTTTTGT+TGG - chr7_4:58015605-58015624 Msa1165980:intron 25.0%
!! TATTATTGAATTTTGCAAGG+AGG - chr7_4:58016108-58016127 Msa1165980:intron 25.0%
! TAATTCTTTACTATCAAGCA+TGG + chr7_4:58016230-58016249 None:intergenic 25.0%
! AAATATACAAGATTCAAGCA+GGG + chr7_4:58016316-58016335 None:intergenic 25.0%
! TAAATATACAAGATTCAAGC+AGG + chr7_4:58016317-58016336 None:intergenic 25.0%
!! GTATATTTAGTTGTACCTTT+TGG - chr7_4:58016328-58016347 Msa1165980:intron 25.0%
! AAAATATGCAATACTTACTG+AGG + chr7_4:58016639-58016658 None:intergenic 25.0%
! CTGTTGTTAATTAGAGTTAT+AGG - chr7_4:58016759-58016778 Msa1165980:intron 25.0%
! TGTTAATTAGAGTTATAGGA+TGG - chr7_4:58016763-58016782 Msa1165980:intron 25.0%
!! TATTTTGTCAACAATTTCAG+AGG - chr7_4:58017038-58017057 Msa1165980:intron 25.0%
! AGCACATCAAATATTGTAAA+AGG - chr7_4:58017090-58017109 Msa1165980:intron 25.0%
! AATAAGACCCATCTAATTAA+TGG + chr7_4:58017226-58017245 None:intergenic 25.0%
! AGCAGATCTAACAAAAAAAA+AGG + chr7_4:58017276-58017295 None:intergenic 25.0%
! TTCCCAATAACCAATAATAA+TGG - chr7_4:58017385-58017404 Msa1165980:five_prime_UTR 25.0%
!! CTTCCATTATTATTGGTTAT+TGG + chr7_4:58017391-58017410 None:intergenic 25.0%
! AAAAACATACATCTAAGTCA+AGG + chr7_4:58017442-58017461 None:intergenic 25.0%
!!! TTTTTTCTTCCTTTCCCAAT+CGG - chr7_4:58013665-58013684 Msa1165980:intron 30.0%
!!! TTTTCTACTAGTTTAGCTCT+TGG - chr7_4:58013707-58013726 Msa1165980:intron 30.0%
TTCAGTACAGTAATGATTTC+TGG - chr7_4:58013816-58013835 Msa1165980:intron 30.0%
AAATTATTTGTAGCTGTAGC+TGG - chr7_4:58014014-58014033 Msa1165980:CDS 30.0%
!!! ACCTTTTTTGTAGTTGAGAA+AGG - chr7_4:58014130-58014149 Msa1165980:CDS 30.0%
ACCTTTCTCAACTACAAAAA+AGG + chr7_4:58014134-58014153 None:intergenic 30.0%
! AATGGTGATGTTTAAAATGG+AGG - chr7_4:58014192-58014211 Msa1165980:CDS 30.0%
! ATGGTGATGTTTAAAATGGA+GGG - chr7_4:58014193-58014212 Msa1165980:CDS 30.0%
ATAGAGAGAAATGTAGAGAA+AGG - chr7_4:58014250-58014269 Msa1165980:intron 30.0%
AGCATAAATATACAAGCCTT+AGG + chr7_4:58014525-58014544 None:intergenic 30.0%
TACTATTTATAGGTTCGCTT+TGG - chr7_4:58014983-58015002 Msa1165980:intron 30.0%
GTACAAAATAGACATTAGGT+GGG + chr7_4:58015231-58015250 None:intergenic 30.0%
TGTACAAAATAGACATTAGG+TGG + chr7_4:58015232-58015251 None:intergenic 30.0%
!! TGTTTGAATTCACTTTTGAG+AGG - chr7_4:58015252-58015271 Msa1165980:intron 30.0%
AAATAAACTTCACGTGCATT+TGG + chr7_4:58015512-58015531 None:intergenic 30.0%
CATAAAGATATAGATAGGGA+GGG + chr7_4:58015793-58015812 None:intergenic 30.0%
ACATAAAGATATAGATAGGG+AGG + chr7_4:58015794-58015813 None:intergenic 30.0%
TGTTTGTCAATGTCATGTAA+TGG - chr7_4:58015823-58015842 Msa1165980:intron 30.0%
GATTTAAGAACTCAACTTTC+TGG - chr7_4:58015853-58015872 Msa1165980:intron 30.0%
ATACAAAGTAGCAGTAACAT+AGG + chr7_4:58015905-58015924 None:intergenic 30.0%
AACACATTTGTGTAAATCTG+TGG + chr7_4:58016021-58016040 None:intergenic 30.0%
ACCAAATACTGATAAATCAG+AGG - chr7_4:58016061-58016080 Msa1165980:intron 30.0%
ACCTCTGATTTATCAGTATT+TGG + chr7_4:58016065-58016084 None:intergenic 30.0%
TCAGAGGTAAGTTAAATATC+TGG - chr7_4:58016077-58016096 Msa1165980:intron 30.0%
AAGCTGAGATTAATTCCAAA+AGG + chr7_4:58016346-58016365 None:intergenic 30.0%
TGACATATCTCTCAAAATGA+TGG - chr7_4:58016365-58016384 Msa1165980:intron 30.0%
ATCTTATGCGAGTAATTCTT+CGG + chr7_4:58016523-58016542 None:intergenic 30.0%
AGTAGAATATCAACACATGA+CGG - chr7_4:58016839-58016858 Msa1165980:intron 30.0%
ACTAACAAACAAGATCACAA+CGG + chr7_4:58016997-58017016 None:intergenic 30.0%
AATTTCTATCAAGAAGCTCT+AGG - chr7_4:58017155-58017174 Msa1165980:CDS 30.0%
! ATTAATGGACATGGAAGATA+TGG + chr7_4:58017211-58017230 None:intergenic 30.0%
TTCCATGTCCATTAATTAGA+TGG - chr7_4:58017215-58017234 Msa1165980:CDS 30.0%
TCCATGTCCATTAATTAGAT+GGG - chr7_4:58017216-58017235 Msa1165980:CDS 30.0%
!! ATGGGTCTTATTCCATTTAA+AGG - chr7_4:58017234-58017253 Msa1165980:CDS 30.0%
TTTACTGTACAAATTATGGG+AGG - chr7_4:58017326-58017345 Msa1165980:five_prime_UTR 30.0%
TTACTGTACAAATTATGGGA+GGG - chr7_4:58017327-58017346 Msa1165980:five_prime_UTR 30.0%
! AAGGGAGTTATTCATTGATT+TGG - chr7_4:58017353-58017372 Msa1165980:five_prime_UTR 30.0%
!! AGGGAGTTATTCATTGATTT+GGG - chr7_4:58017354-58017373 Msa1165980:five_prime_UTR 30.0%
! ACCAATAATAATGGAAGTTC+AGG - chr7_4:58017394-58017413 Msa1165980:five_prime_UTR 30.0%
TCCTGAACTTCCATTATTAT+TGG + chr7_4:58017398-58017417 None:intergenic 30.0%
TATTCGGCTTATTACATGAA+TGG + chr7_4:58017470-58017489 None:intergenic 30.0%
! GTACCAAAAACGTTGTTATT+CGG + chr7_4:58017486-58017505 None:intergenic 30.0%
CTTTATCATTGACCAAACAC+AGG - chr7_4:58013095-58013114 Msa1165980:three_prime_UTR 35.0%
! AAAAGGTTGTAGTGAGGTTT+TGG - chr7_4:58013264-58013283 Msa1165980:three_prime_UTR 35.0%
! TTCAACTTTTCTTCTTCCAC+CGG - chr7_4:58013346-58013365 Msa1165980:three_prime_UTR 35.0%
AAAGAGGGGTAAGAATTGAA+AGG + chr7_4:58013484-58013503 None:intergenic 35.0%
! TACGAACATGAGAAGGATTT+TGG + chr7_4:58013629-58013648 None:intergenic 35.0%
! TTTTTCTTCCTTTCCCAATC+GGG - chr7_4:58013666-58013685 Msa1165980:intron 35.0%
!!! ACTCTGTGTTTCACCTTTTT+TGG - chr7_4:58013743-58013762 Msa1165980:intron 35.0%
!!! CTCTGTGTTTCACCTTTTTT+GGG - chr7_4:58013744-58013763 Msa1165980:intron 35.0%
!!! TCTGTGTTTCACCTTTTTTG+GGG - chr7_4:58013745-58013764 Msa1165980:intron 35.0%
TTACGTATTATATGTGGGGA+TGG - chr7_4:58013985-58014004 Msa1165980:CDS 35.0%
TACGTATTATATGTGGGGAT+GGG - chr7_4:58013986-58014005 Msa1165980:CDS 35.0%
CTCAACTACAAAAAAGGTAG+AGG + chr7_4:58014128-58014147 None:intergenic 35.0%
! ATTACTGATTGACCTCAAGT+AGG - chr7_4:58014354-58014373 Msa1165980:intron 35.0%
AGTTTGATTCCTAGAGTTGT+TGG + chr7_4:58014439-58014458 None:intergenic 35.0%
GTGTTGGGAGAGTTTATATT+TGG + chr7_4:58014493-58014512 None:intergenic 35.0%
AGGTAATAGGAGTGAACTTA+TGG - chr7_4:58014620-58014639 Msa1165980:intron 35.0%
GGTAATAGGAGTGAACTTAT+GGG - chr7_4:58014621-58014640 Msa1165980:intron 35.0%
AAGGGATAGCAAAATCGAAA+AGG - chr7_4:58014920-58014939 Msa1165980:intron 35.0%
AGGGATAGCAAAATCGAAAA+GGG - chr7_4:58014921-58014940 Msa1165980:intron 35.0%
!!! GCTTTTGGGATTGATGTTAT+TGG - chr7_4:58015179-58015198 Msa1165980:intron 35.0%
! GAAGTCTTCGAAATCACTTT+TGG + chr7_4:58015279-58015298 None:intergenic 35.0%
!! CGAAGACTTCGAATTGATTT+TGG - chr7_4:58015289-58015308 Msa1165980:intron 35.0%
TGCACGTGAAGTTTATTTGT+TGG - chr7_4:58015514-58015533 Msa1165980:intron 35.0%
! ACGTGAAGTTTATTTGTTGG+AGG - chr7_4:58015517-58015536 Msa1165980:intron 35.0%
CACTAAAAGCTCTGTAAAAG+TGG - chr7_4:58015560-58015579 Msa1165980:intron 35.0%
!! GGTTTGTTTTTCTGTGTTAC+TGG - chr7_4:58015581-58015600 Msa1165980:intron 35.0%
!!! TAAGTGTTGAGTTTTCTGTC+AGG - chr7_4:58015691-58015710 Msa1165980:intron 35.0%
ACTTGATTTCTATGCAAACC+TGG - chr7_4:58015764-58015783 Msa1165980:intron 35.0%
TCACACCAAAATGCTGTTAT+TGG - chr7_4:58015877-58015896 Msa1165980:intron 35.0%
! AGGAACCAATAACAGCATTT+TGG + chr7_4:58015885-58015904 None:intergenic 35.0%
CCTGAAGTTGAAATTGACAA+CGG + chr7_4:58016149-58016168 None:intergenic 35.0%
! CTTCAGGCTTAGATAGTTTT+TGG - chr7_4:58016162-58016181 Msa1165980:intron 35.0%
TTACTATCAAGCATGGATGA+GGG + chr7_4:58016223-58016242 None:intergenic 35.0%
TTTACTATCAAGCATGGATG+AGG + chr7_4:58016224-58016243 None:intergenic 35.0%
ACTCATTTATGTGCTGTGAT+AGG + chr7_4:58016280-58016299 None:intergenic 35.0%
TTCATTCAATCTTCTGTCGA+GGG - chr7_4:58016544-58016563 Msa1165980:intron 35.0%
AGTTACTCATAAGGAACACA+AGG + chr7_4:58016798-58016817 None:intergenic 35.0%
CACAACGGAATGATTGAAAA+AGG + chr7_4:58016982-58017001 None:intergenic 35.0%
! GTTGTGATCTTGTTTGTTAG+TGG - chr7_4:58016996-58017015 Msa1165980:CDS 35.0%
AGTCTGATTCAGATCTTCTT+TGG - chr7_4:58017130-58017149 Msa1165980:intron 35.0%
! ACCCATCTAATTAATGGACA+TGG + chr7_4:58017220-58017239 None:intergenic 35.0%
! AAGAAAGTCTGGCCTTTAAA+TGG + chr7_4:58017249-58017268 None:intergenic 35.0%
AAAAAGGTCAGAAGAAAGTC+TGG + chr7_4:58017260-58017279 None:intergenic 35.0%
! AAGCCGAATAACAACGTTTT+TGG - chr7_4:58017480-58017499 Msa1165980:five_prime_UTR 35.0%
ACGCAAAAAAGGTTGTAGTG+AGG - chr7_4:58013258-58013277 Msa1165980:three_prime_UTR 40.0%
!! GAAGAGAAGCATCAATCGTT+AGG - chr7_4:58013298-58013317 Msa1165980:three_prime_UTR 40.0%
! GAAGCATCAATCGTTAGGAT+AGG - chr7_4:58013303-58013322 Msa1165980:three_prime_UTR 40.0%
CATCAATCGTTAGGATAGGA+TGG - chr7_4:58013307-58013326 Msa1165980:three_prime_UTR 40.0%
ACGGAAGAAGAAGAAGTTTC+CGG + chr7_4:58013368-58013387 None:intergenic 40.0%
! AAGAGCGTATGTCAGAGAAA+CGG + chr7_4:58013387-58013406 None:intergenic 40.0%
CAAAGCAAAGGAGCGAATTT+GGG + chr7_4:58013431-58013450 None:intergenic 40.0%
CAAATTCGCTCCTTTGCTTT+GGG - chr7_4:58013430-58013449 Msa1165980:CDS 40.0%
GGTAAGAATTGAAAGGATGG+GGG + chr7_4:58013477-58013496 None:intergenic 40.0%
GGGTAAGAATTGAAAGGATG+GGG + chr7_4:58013478-58013497 None:intergenic 40.0%
GGGGTAAGAATTGAAAGGAT+GGG + chr7_4:58013479-58013498 None:intergenic 40.0%
AGGGGTAAGAATTGAAAGGA+TGG + chr7_4:58013480-58013499 None:intergenic 40.0%
CATTTCATCATACACACGGT+TGG + chr7_4:58013589-58013608 None:intergenic 40.0%
! GAGGCATTTCATCATACACA+CGG + chr7_4:58013593-58013612 None:intergenic 40.0%
! TTTTGGTGAGGGAAGAAAAG+AGG + chr7_4:58013612-58013631 None:intergenic 40.0%
!! CATGAGAAGGATTTTGGTGA+GGG + chr7_4:58013623-58013642 None:intergenic 40.0%
!! ACATGAGAAGGATTTTGGTG+AGG + chr7_4:58013624-58013643 None:intergenic 40.0%
!!! CTGTGTTTCACCTTTTTTGG+GGG - chr7_4:58013746-58013765 Msa1165980:intron 40.0%
ACGTATTATATGTGGGGATG+GGG - chr7_4:58013987-58014006 Msa1165980:CDS 40.0%
ACCATTGAATCTAACGCAAG+TGG - chr7_4:58014083-58014102 Msa1165980:CDS 40.0%
ACCACTTGCGTTAGATTCAA+TGG + chr7_4:58014087-58014106 None:intergenic 40.0%
AGTTAGATGATCCAAATCCG+TGG - chr7_4:58014285-58014304 Msa1165980:intron 40.0%
GTTAGATGATCCAAATCCGT+GGG - chr7_4:58014286-58014305 Msa1165980:intron 40.0%
TTAGATGATCCAAATCCGTG+GGG - chr7_4:58014287-58014306 Msa1165980:intron 40.0%
!! GGCAATGCATCAGAAGTATT+TGG + chr7_4:58014326-58014345 None:intergenic 40.0%
!!! GAGTTGGTTTTTCGTTCTAG+CGG - chr7_4:58014379-58014398 Msa1165980:intron 40.0%
!!! AGTTGGTTTTTCGTTCTAGC+GGG - chr7_4:58014380-58014399 Msa1165980:intron 40.0%
TTGATTCCTAGAGTTGTTGG+AGG + chr7_4:58014436-58014455 None:intergenic 40.0%
AAACTCTCCCAACACTATTC+TGG - chr7_4:58014498-58014517 Msa1165980:intron 40.0%
CTTAGGACCAGAATAGTGTT+GGG + chr7_4:58014508-58014527 None:intergenic 40.0%
TTCAGTTCACATGCGTGTAT+AGG - chr7_4:58014600-58014619 Msa1165980:CDS 40.0%
CACATGCGTGTATAGGTAAT+AGG - chr7_4:58014607-58014626 Msa1165980:intron 40.0%
CTGTTGTCAATGCGAAAATG+CGG - chr7_4:58014728-58014747 Msa1165980:intron 40.0%
ATTTATAGGTTCGCTTTGGC+CGG - chr7_4:58014987-58015006 Msa1165980:intron 40.0%
! TCCTGATTTTTCCGCTATAG+CGG - chr7_4:58015051-58015070 Msa1165980:intron 40.0%
AGGTGGGAATAAAGTTCATC+TGG + chr7_4:58015215-58015234 None:intergenic 40.0%
!! TTCACGTGCATTTGGTTCTA+AGG + chr7_4:58015504-58015523 None:intergenic 40.0%
ATAATGGCAAACCAAGCTCT+AGG + chr7_4:58015634-58015653 None:intergenic 40.0%
GGTTTGCCATTATGAGTCTA+CGG - chr7_4:58015641-58015660 Msa1165980:intron 40.0%
GACTAACCGTAGACTCATAA+TGG + chr7_4:58015650-58015669 None:intergenic 40.0%
TACAAGCCTGATGCAATCAA+AGG - chr7_4:58015714-58015733 Msa1165980:intron 40.0%
ATGTCACCTTTGATTGCATC+AGG + chr7_4:58015723-58015742 None:intergenic 40.0%
TGATGCAATCAAAGGTGACA+TGG - chr7_4:58015722-58015741 Msa1165980:intron 40.0%
AAGGTGACATGGATTCAATC+AGG - chr7_4:58015733-58015752 Msa1165980:intron 40.0%
TCATTCCATGAATCATGTCG+AGG - chr7_4:58015932-58015951 Msa1165980:intron 40.0%
CATTCCATGAATCATGTCGA+GGG - chr7_4:58015933-58015952 Msa1165980:intron 40.0%
AATTGACGAGTCTCAAGATC+AGG - chr7_4:58015992-58016011 Msa1165980:intron 40.0%
! TGAATTTTGCAAGGAGGAGA+CGG - chr7_4:58016114-58016133 Msa1165980:intron 40.0%
CCGTTGTCAATTTCAACTTC+AGG - chr7_4:58016146-58016165 Msa1165980:intron 40.0%
ACAAGATTCAAGCAGGGATA+AGG + chr7_4:58016310-58016329 None:intergenic 40.0%
TGAGGCAATCATCAGATAGA+AGG + chr7_4:58016489-58016508 None:intergenic 40.0%
TCTTCGGAAGAAGTTGAATG+AGG + chr7_4:58016507-58016526 None:intergenic 40.0%
CTTCATTCAATCTTCTGTCG+AGG - chr7_4:58016543-58016562 Msa1165980:intron 40.0%
ATTGTGGACTCGTTCCTATT+GGG - chr7_4:58016572-58016591 Msa1165980:intron 40.0%
ACAAATTATGGGAGGGTGAA+AGG - chr7_4:58017334-58017353 Msa1165980:five_prime_UTR 40.0%
CAAATTATGGGAGGGTGAAA+GGG - chr7_4:58017335-58017354 Msa1165980:five_prime_UTR 40.0%
! GTTGGTTTCGTACCTGTGTT+TGG + chr7_4:58013110-58013129 None:intergenic 45.0%
GAAGAAGAAGAAGTTTCCGG+TGG + chr7_4:58013365-58013384 None:intergenic 45.0%
CCAAAGCAAAGGAGCGAATT+TGG + chr7_4:58013432-58013451 None:intergenic 45.0%
CCAAATTCGCTCCTTTGCTT+TGG - chr7_4:58013429-58013448 Msa1165980:CDS 45.0%
CATATACGAGTTTGCGCTGA+TGG - chr7_4:58013558-58013577 Msa1165980:intron 45.0%
ATCCTTCTCATGTTCGTACC+AGG - chr7_4:58013631-58013650 Msa1165980:intron 45.0%
TACCTGGTACGAACATGAGA+AGG + chr7_4:58013636-58013655 None:intergenic 45.0%
TTTCAGAACCCGATTGGGAA+AGG + chr7_4:58013677-58013696 None:intergenic 45.0%
CACGATTTCAGAACCCGATT+GGG + chr7_4:58013682-58013701 None:intergenic 45.0%
! CATTTTGTGGATAGGACCAC+CGG + chr7_4:58013784-58013803 None:intergenic 45.0%
TGCAAAATGCATCACGTCTG+TGG - chr7_4:58013899-58013918 Msa1165980:intron 45.0%
! TAACGCAAGTGGTTGATGCA+CGG - chr7_4:58014094-58014113 Msa1165980:CDS 45.0%
TAGATGATCCAAATCCGTGG+GGG - chr7_4:58014288-58014307 Msa1165980:intron 45.0%
ACTGATTGACCTCAAGTAGG+CGG - chr7_4:58014357-58014376 Msa1165980:intron 45.0%
TAGCTACCTCCAACAACTCT+AGG - chr7_4:58014427-58014446 Msa1165980:intron 45.0%
CCTTAGGACCAGAATAGTGT+TGG + chr7_4:58014509-58014528 None:intergenic 45.0%
CCAACACTATTCTGGTCCTA+AGG - chr7_4:58014506-58014525 Msa1165980:intron 45.0%
! ACCGCTATAGCGGAAAAATC+AGG + chr7_4:58015055-58015074 None:intergenic 45.0%
! GATTTTTCCGCTATAGCGGT+CGG - chr7_4:58015055-58015074 Msa1165980:intron 45.0%
!! ACGTGCATTTGGTTCTAAGG+TGG + chr7_4:58015501-58015520 None:intergenic 45.0%
!! TTTGTTGGTGACCTAGAGCT+TGG - chr7_4:58015620-58015639 Msa1165980:intron 45.0%
! GTCTACGGTTAGTCGATTAC+AGG - chr7_4:58015656-58015675 Msa1165980:intron 45.0%
TATAGATAGGGAGGGATACC+AGG + chr7_4:58015785-58015804 None:intergenic 45.0%
AAGACCCTCGACATGATTCA+TGG + chr7_4:58015940-58015959 None:intergenic 45.0%
GAATCATGTCGAGGGTCTTA+TGG - chr7_4:58015941-58015960 Msa1165980:intron 45.0%
! GAATTTTGCAAGGAGGAGAC+GGG - chr7_4:58016115-58016134 Msa1165980:intron 45.0%
! AATTTTGCAAGGAGGAGACG+GGG - chr7_4:58016116-58016135 Msa1165980:intron 45.0%
TCAAGCAGGGATAAGGTCTA+AGG + chr7_4:58016303-58016322 None:intergenic 45.0%
! CAGCTATGCATTCTTGCTGT+TGG - chr7_4:58016388-58016407 Msa1165980:intron 45.0%
!! ATTCTTGCTGTTGGAGCACT+TGG - chr7_4:58016397-58016416 Msa1165980:intron 45.0%
GGGAGATTTGATCACGAGAT+TGG - chr7_4:58016421-58016440 Msa1165980:intron 45.0%
TAGAAGGATAATGCGCGTGT+TGG + chr7_4:58016473-58016492 None:intergenic 45.0%
ATAGGAACGAGTCCACAATG+TGG + chr7_4:58016571-58016590 None:intergenic 45.0%
CATTGTGGACTCGTTCCTAT+TGG - chr7_4:58016571-58016590 Msa1165980:intron 45.0%
TCCTGTGGTTGTAGAACTTC+CGG + chr7_4:58016605-58016624 None:intergenic 45.0%
AATACTTACTGAGGTCCCAC+TGG + chr7_4:58016630-58016649 None:intergenic 45.0%
GAGGACACAGAGATGAGATT+TGG - chr7_4:58017057-58017076 Msa1165980:intron 45.0%
GACACAGAGATGAGATTTGG+CGG - chr7_4:58017060-58017079 Msa1165980:intron 45.0%
TACATGTTGCATACTGCACC+TGG - chr7_4:58017181-58017200 Msa1165980:CDS 45.0%
CATGGAAGATATGGAAAGCC+AGG + chr7_4:58017202-58017221 None:intergenic 45.0%
!! ATAAATAAATAATACTAATT+AGG - chr7_4:58013862-58013881 Msa1165980:intron 5.0%
ATACCGTGGTCCCAAAGCAA+AGG + chr7_4:58013443-58013462 None:intergenic 50.0%
GGGTGCAGAAAGAAATACCG+TGG + chr7_4:58013457-58013476 None:intergenic 50.0%
! ATACGAGTTTGCGCTGATGG+AGG - chr7_4:58013561-58013580 Msa1165980:intron 50.0%
GCACGATTTCAGAACCCGAT+TGG + chr7_4:58013683-58013702 None:intergenic 50.0%
AATGGCAGAGCCCCCAAAAA+AGG + chr7_4:58013759-58013778 None:intergenic 50.0%
AAACCAACTCCGCCTACTTG+AGG + chr7_4:58014369-58014388 None:intergenic 50.0%
CGCGTGTCAAAAGTGGAAAC+CGG + chr7_4:58015009-58015028 None:intergenic 50.0%
! GTCGAGGGTCTTATGGTCTT+TGG - chr7_4:58015948-58015967 Msa1165980:intron 50.0%
! TATGGTCTTTGGCTTCCTGC+AGG - chr7_4:58015959-58015978 Msa1165980:intron 50.0%
! ATGGTCTTTGGCTTCCTGCA+GGG - chr7_4:58015960-58015979 Msa1165980:intron 50.0%
CAATTATCTTCGTCCCCTGC+AGG + chr7_4:58015977-58015996 None:intergenic 50.0%
! ATTTTGCAAGGAGGAGACGG+GGG - chr7_4:58016117-58016136 Msa1165980:intron 50.0%
! TTGCTGTTGGAGCACTTGGT+GGG - chr7_4:58016401-58016420 Msa1165980:intron 50.0%
GTTCCTATTGGGATGCCATC+CGG - chr7_4:58016583-58016602 Msa1165980:intron 50.0%
GTGGTTGTAGAACTTCCGGA+TGG + chr7_4:58016601-58016620 None:intergenic 50.0%
TCCGGAAGTTCTACAACCAC+AGG - chr7_4:58016601-58016620 Msa1165980:intron 50.0%
TACAACCACAGGACTCCAGT+GGG - chr7_4:58016612-58016631 Msa1165980:intron 50.0%
!! GCTCCTTTGCTTTGGGACCA+CGG - chr7_4:58013437-58013456 Msa1165980:CDS 55.0%
TGGATAGGACCACCGGTGAA+TGG + chr7_4:58013777-58013796 None:intergenic 55.0%
TGACCTCAAGTAGGCGGAGT+TGG - chr7_4:58014363-58014382 Msa1165980:intron 55.0%
GTCAATGCGAAAATGCGGCG+TGG - chr7_4:58014733-58014752 Msa1165980:intron 55.0%
AAAATCAGGACCACCGCACC+AGG + chr7_4:58015041-58015060 None:intergenic 55.0%
! TGGTCTTTGGCTTCCTGCAG+GGG - chr7_4:58015961-58015980 Msa1165980:intron 55.0%
!! CTTGCTGTTGGAGCACTTGG+TGG - chr7_4:58016400-58016419 Msa1165980:intron 55.0%
TCTGTCGAGGGTCCACATTG+TGG - chr7_4:58016556-58016575 Msa1165980:intron 55.0%
CTTCCGGATGGCATCCCAAT+AGG + chr7_4:58016589-58016608 None:intergenic 55.0%
CTACAACCACAGGACTCCAG+TGG - chr7_4:58016611-58016630 Msa1165980:intron 55.0%
TTGGGGGCTCTGCCATTCAC+CGG - chr7_4:58013762-58013781 Msa1165980:intron 60.0%
TGTGTGTGCCCCCACGGATT+TGG + chr7_4:58014299-58014318 None:intergenic 60.0%
GGATCTTGTGTGTGCCCCCA+CGG + chr7_4:58014305-58014324 None:intergenic 60.0%
TGCGGCGTGGCCAACTCAAT+TGG - chr7_4:58014746-58014765 Msa1165980:intron 60.0%
CGTGGCCAACTCAATTGGCG+CGG - chr7_4:58014751-58014770 Msa1165980:intron 60.0%
CCAACTCAATTGGCGCGGTG+CGG - chr7_4:58014756-58014775 Msa1165980:intron 60.0%
CAACTCAATTGGCGCGGTGC+GGG - chr7_4:58014757-58014776 Msa1165980:intron 60.0%
GCGCGTAGCAGGCGCTATTT+CGG - chr7_4:58014786-58014805 Msa1165980:intron 60.0%
! CGTAGCAGGCGCTATTTCGG+TGG - chr7_4:58014789-58014808 Msa1165980:intron 60.0%
!! ACTTTTGACACGCGCCGACG+CGG - chr7_4:58015015-58015034 Msa1165980:intron 60.0%
TTCCGCTATAGCGGTCGGTG+CGG - chr7_4:58015060-58015079 Msa1165980:intron 60.0%
CCGCACCGCGCCAATTGAGT+TGG + chr7_4:58014759-58014778 None:intergenic 65.0%
! GCGTCGGCGCGTGTCAAAAG+TGG + chr7_4:58015016-58015035 None:intergenic 65.0%
GAGGTCCCACTGGAGTCCTG+TGG + chr7_4:58016620-58016639 None:intergenic 65.0%
GGGGCTCTGCCATTCACCGG+TGG - chr7_4:58013765-58013784 Msa1165980:intron 70.0%
CAATTGGCGCGGTGCGGGAG+CGG - chr7_4:58014762-58014781 Msa1165980:intron 70.0%
AATTGGCGCGGTGCGGGAGC+GGG - chr7_4:58014763-58014782 Msa1165980:intron 70.0%
! GGCCGCACCGACCGCTATAG+CGG + chr7_4:58015065-58015084 None:intergenic 70.0%
ATTGGCGCGGTGCGGGAGCG+GGG - chr7_4:58014764-58014783 Msa1165980:intron 75.0%
ACCACCGCACCAGGCCGCGT+CGG + chr7_4:58015032-58015051 None:intergenic 75.0%
!! TGACACGCGCCGACGCGGCC+TGG - chr7_4:58015020-58015039 Msa1165980:intron 80.0%
! GCGGGAGCGGGGCGCGTAGC+AGG - chr7_4:58014775-58014794 Msa1165980:intron 85.0%
!! CGCGCCGACGCGGCCTGGTG+CGG - chr7_4:58015025-58015044 Msa1165980:intron 85.0%
! GCCGACGCGGCCTGGTGCGG+TGG - chr7_4:58015028-58015047 Msa1165980:intron 85.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 58013095 58017508 58013095 ID=Msa1165980;Name=Msa1165980
chr7_4 mRNA 58013095 58017508 58013095 ID=Msa1165980-mRNA-1;Parent=Msa1165980;Name=Msa1165980-mRNA-1;_AED=0.02;_eAED=0.02;_QI=231|1|1|1|1|1|6|332|257
chr7_4 exon 58013095 58013545 58013095 ID=Msa1165980-mRNA-1:exon:17692;Parent=Msa1165980-mRNA-1
chr7_4 exon 58013963 58014212 58013963 ID=Msa1165980-mRNA-1:exon:17691;Parent=Msa1165980-mRNA-1
chr7_4 exon 58014521 58014622 58014521 ID=Msa1165980-mRNA-1:exon:17690;Parent=Msa1165980-mRNA-1
chr7_4 exon 58014818 58014890 58014818 ID=Msa1165980-mRNA-1:exon:17689;Parent=Msa1165980-mRNA-1
chr7_4 exon 58016951 58017047 58016951 ID=Msa1165980-mRNA-1:exon:17688;Parent=Msa1165980-mRNA-1
chr7_4 exon 58017145 58017508 58017145 ID=Msa1165980-mRNA-1:exon:17687;Parent=Msa1165980-mRNA-1
chr7_4 five_prime_UTR 58017278 58017508 58017278 ID=Msa1165980-mRNA-1:five_prime_utr;Parent=Msa1165980-mRNA-1
chr7_4 CDS 58017145 58017277 58017145 ID=Msa1165980-mRNA-1:cds;Parent=Msa1165980-mRNA-1
chr7_4 CDS 58016951 58017047 58016951 ID=Msa1165980-mRNA-1:cds;Parent=Msa1165980-mRNA-1
chr7_4 CDS 58014818 58014890 58014818 ID=Msa1165980-mRNA-1:cds;Parent=Msa1165980-mRNA-1
chr7_4 CDS 58014521 58014622 58014521 ID=Msa1165980-mRNA-1:cds;Parent=Msa1165980-mRNA-1
chr7_4 CDS 58013963 58014212 58013963 ID=Msa1165980-mRNA-1:cds;Parent=Msa1165980-mRNA-1
chr7_4 CDS 58013427 58013545 58013427 ID=Msa1165980-mRNA-1:cds;Parent=Msa1165980-mRNA-1
chr7_4 three_prime_UTR 58013095 58013426 58013095 ID=Msa1165980-mRNA-1:three_prime_utr;Parent=Msa1165980-mRNA-1
Gene Sequence

>Msa1165980

ATGGAGTTGATGTGTCATTGTTCAACTTTTCTTCTTCCACCGGAAACTTCTTCTTCTTCCGTTTCTCTGACATACGCTCTTGTTATTCTCAATCAAAATCTTCCCAAATTCGCTCCTTTGCTTTGGGACCACGCTCATATACGAGTTTGCGCTGATGGAGGTGCCAACCGTGTGTATGATGAAATGCCTCTTTTCTTCCCTCACCAAAATCCTTCTCATGTTCGTACCAGGTACAAGCCTGATGCAATCAAAGGTGACATGGATTCAATCAGGACAGAAGTACTTGATTTCTATGCAAACCTGGGGACGAAGATAATTGACGAGTCTCAAGATCAGGACACCACAGATTTACACAAATGTGTTGCATACATTCGTGACCTTATACCAAATACTGATAAATCAGAGCTATGCATTCTTGCTGTTGGAGCACTTGGTGGGAGATTTGATCACGAGATTGGAAATATTAATGTGCTATGTCGATTCTCCAACACGCGCATTATCCTTCTATCTGATGATTGCCTCATTCAACTTCTTCCGAAGAATTACTCGCATAAGATCTTCATTCAATCTTCTGTCGAGGGTCCACATTGTGGACTCGTTCCTATTGGGATGCCATCCGGAAGTTCTACAACCACAGGACTCCAGTGGGACCTCAAGGACACAGAGATGAGATTTGGCGGTTTAGTAAGCACATCAAATATTGTAAAAGGAGATATAGTAACAGTACAGTCTGATTCAGATCTTCTTTGGACAATTTCTATCAAGAAGCTCTAG
Protein sequence

>Msa1165980

MELMCHCSTFLLPPETSSSSVSLTYALVILNQNLPKFAPLLWDHAHIRVCADGGANRVYDEMPLFFPHQNPSHVRTRYKPDAIKGDMDSIRTEVLDFYANLGTKIIDESQDQDTTDLHKCVAYIRDLIPNTDKSELCILAVGALGGRFDHEIGNINVLCRFSNTRIILLSDDCLIQLLPKNYSHKIFIQSSVEGPHCGLVPIGMPSGSSTTTGLQWDLKDTEMRFGGLVSTSNIVKGDIVTVQSDSDLLWTISIKKL*