Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0385320 | XP_003603769.1 | 96.053 | 608 | 24 | 0 | 1 | 608 | 1 | 608 | 0.0 | 1204 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0385320 | sp|Q9SA91|PSI2_ARATH | 48.154 | 623 | 293 | 9 | 1 | 606 | 1 | 610 | 0.0 | 533 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0385320 | G7J592 | 96.053 | 608 | 24 | 0 | 1 | 608 | 1 | 608 | 0.0 | 1204 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026420 | Msa0385320 | 0.803058 | 4.177274e-49 | -8.615850e-47 |
| Msa0030800 | Msa0385320 | 0.818685 | 1.723130e-52 | -8.615850e-47 |
| Msa0035790 | Msa0385320 | 0.850033 | 2.205856e-60 | -8.615850e-47 |
| Msa0046680 | Msa0385320 | 0.845898 | 3.047145e-59 | -8.615850e-47 |
| Msa0051480 | Msa0385320 | 0.841923 | 3.539236e-58 | -8.615850e-47 |
| Msa0051620 | Msa0385320 | 0.813924 | 2.000657e-51 | -8.615850e-47 |
| Msa0051730 | Msa0385320 | 0.820301 | 7.374860e-53 | -8.615850e-47 |
| Msa0076640 | Msa0385320 | 0.835340 | 1.776548e-56 | -8.615850e-47 |
| Msa0078210 | Msa0385320 | 0.812646 | 3.818617e-51 | -8.615850e-47 |
| Msa0083890 | Msa0385320 | 0.851419 | 8.983340e-61 | -8.615850e-47 |
| Msa0143640 | Msa0385320 | 0.837203 | 5.971492e-57 | -8.615850e-47 |
| Msa0146090 | Msa0385320 | 0.803569 | 3.274978e-49 | -8.615850e-47 |
| Msa0146200 | Msa0385320 | 0.845058 | 5.146015e-59 | -8.615850e-47 |
| Msa0162680 | Msa0385320 | 0.818634 | 1.769088e-52 | -8.615850e-47 |
| Msa0224210 | Msa0385320 | 0.802908 | 4.487212e-49 | -8.615850e-47 |
| Msa0238710 | Msa0385320 | 0.806078 | 9.796975e-50 | -8.615850e-47 |
| Msa0385320 | Msa0390790 | 0.805555 | 1.261773e-49 | -8.615850e-47 |
| Msa0385320 | Msa0393100 | 0.823541 | 1.310313e-53 | -8.615850e-47 |
| Msa0385320 | Msa0402800 | 0.839538 | 1.492724e-57 | -8.615850e-47 |
| Msa0385320 | Msa0421080 | 0.829108 | 6.189755e-55 | -8.615850e-47 |
| Msa0385320 | Msa0438070 | 0.840744 | 7.229704e-58 | -8.615850e-47 |
| Msa0385320 | Msa0447160 | 0.802394 | 5.729121e-49 | -8.615850e-47 |
| Msa0385320 | Msa0449620 | 0.814097 | 1.832223e-51 | -8.615850e-47 |
| Msa0385320 | Msa0466850 | 0.846489 | 2.104050e-59 | -8.615850e-47 |
| Msa0385320 | Msa0480530 | 0.819789 | 9.657649e-53 | -8.615850e-47 |
| Msa0385320 | Msa0480540 | 0.839120 | 1.915745e-57 | -8.615850e-47 |
| Msa0385320 | Msa0480550 | 0.853730 | 1.969269e-61 | -8.615850e-47 |
| Msa0385320 | Msa0481740 | 0.819012 | 1.451864e-52 | -8.615850e-47 |
| Msa0385320 | Msa0481770 | 0.888779 | 4.362732e-73 | -8.615850e-47 |
| Msa0385320 | Msa0488580 | 0.806818 | 6.838779e-50 | -8.615850e-47 |
| Msa0385320 | Msa0497860 | 0.835183 | 1.945920e-56 | -8.615850e-47 |
| Msa0385320 | Msa0500770 | 0.806193 | 9.264217e-50 | -8.615850e-47 |
| Msa0385320 | Msa0508160 | 0.805149 | 1.534664e-49 | -8.615850e-47 |
| Msa0385320 | Msa0513670 | 0.851970 | 6.273114e-61 | -8.615850e-47 |
| Msa0385320 | Msa0523080 | 0.889722 | 1.877825e-73 | -8.615850e-47 |
| Msa0385320 | Msa0565180 | 0.805736 | 1.155740e-49 | -8.615850e-47 |
| Msa0385320 | Msa0568110 | 0.831433 | 1.674139e-55 | -8.615850e-47 |
| Msa0385320 | Msa0570460 | 0.853690 | 2.023114e-61 | -8.615850e-47 |
| Msa0385320 | Msa0580840 | 0.834720 | 2.545750e-56 | -8.615850e-47 |
| Msa0385320 | Msa0581150 | 0.826204 | 3.084526e-54 | -8.615850e-47 |
| Msa0385320 | Msa0614290 | 0.800935 | 1.141149e-48 | -8.615850e-47 |
| Msa0385320 | Msa0652610 | 0.800009 | 1.762385e-48 | -8.615850e-47 |
| Msa0385320 | Msa0657340 | 0.816788 | 4.616673e-52 | -8.615850e-47 |
| Msa0385320 | Msa0701430 | 0.810737 | 9.931766e-51 | -8.615850e-47 |
| Msa0385320 | Msa0744540 | 0.821252 | 4.456055e-53 | -8.615850e-47 |
| Msa0385320 | Msa0744550 | 0.844905 | 5.658078e-59 | -8.615850e-47 |
| Msa0385320 | Msa0744560 | 0.850383 | 1.759845e-60 | -8.615850e-47 |
| Msa0385320 | Msa0746340 | 0.821364 | 4.200246e-53 | -8.615850e-47 |
| Msa0385320 | Msa0795320 | 0.810328 | 1.217195e-50 | -8.615850e-47 |
| Msa0385320 | Msa0826360 | 0.843413 | 1.422580e-58 | -8.615850e-47 |
| Msa0385320 | Msa0826370 | 0.849842 | 2.493782e-60 | -8.615850e-47 |
| Msa0385320 | Msa0826380 | 0.821276 | 4.401238e-53 | -8.615850e-47 |
| Msa0385320 | Msa0826450 | 0.828939 | 6.800579e-55 | -8.615850e-47 |
| Msa0385320 | Msa0837550 | 0.805468 | 1.315407e-49 | -8.615850e-47 |
| Msa0385320 | Msa0865810 | 0.845098 | 5.020136e-59 | -8.615850e-47 |
| Msa0385320 | Msa0865820 | 0.827400 | 1.597692e-54 | -8.615850e-47 |
| Msa0385320 | Msa0865830 | 0.848578 | 5.604682e-60 | -8.615850e-47 |
| Msa0385320 | Msa0881510 | 0.806940 | 6.443000e-50 | -8.615850e-47 |
| Msa0385320 | Msa0945320 | 0.807136 | 5.858557e-50 | -8.615850e-47 |
| Msa0385320 | Msa0947520 | 0.805376 | 1.375350e-49 | -8.615850e-47 |
| Msa0385320 | Msa1080650 | 0.826585 | 2.501956e-54 | -8.615850e-47 |
| Msa0385320 | Msa1122920 | -0.804471 | 2.126418e-49 | -8.615850e-47 |
| Msa0385320 | Msa1126440 | 0.819961 | 8.823136e-53 | -8.615850e-47 |
| Msa0385320 | Msa1126870 | 0.816783 | 4.628207e-52 | -8.615850e-47 |
| Msa0385320 | Msa1126940 | 0.820614 | 6.248776e-53 | -8.615850e-47 |
| Msa0385320 | Msa1165980 | 0.820752 | 5.810998e-53 | -8.615850e-47 |
| Msa0385320 | Msa1174280 | 0.815572 | 8.629095e-52 | -8.615850e-47 |
| Msa0385320 | Msa1177360 | -0.804048 | 2.603703e-49 | -8.615850e-47 |
| Msa0385320 | Msa1183750 | 0.855118 | 7.815505e-62 | -8.615850e-47 |
| Msa0385320 | Msa1211610 | 0.819901 | 9.102566e-53 | -8.615850e-47 |
| Msa0385320 | Msa1223560 | 0.833488 | 5.181416e-56 | -8.615850e-47 |
| Msa0385320 | Msa1224510 | 0.823511 | 1.331498e-53 | -8.615850e-47 |
| Msa0385320 | Msa1228810 | 0.827546 | 1.473564e-54 | -8.615850e-47 |
| Msa0385320 | Msa1236740 | -0.802147 | 6.440703e-49 | -8.615850e-47 |
| Msa0385320 | Msa1256600 | 0.819384 | 1.194915e-52 | -8.615850e-47 |
| Msa0385320 | Msa1263500 | 0.826401 | 2.768476e-54 | -8.615850e-47 |
| Msa0385320 | Msa1299480 | 0.822661 | 2.102471e-53 | -8.615850e-47 |
| Msa0385320 | Msa1309050 | 0.834577 | 2.766276e-56 | -8.615850e-47 |
| Msa0385320 | Msa1322180 | 0.819141 | 1.357150e-52 | -8.615850e-47 |
| Msa0385320 | Msa1333700 | 0.829307 | 5.538610e-55 | -8.615850e-47 |
| Msa0385320 | Msa1344330 | 0.828263 | 9.909063e-55 | -8.615850e-47 |
| Msa0385320 | Msa1344870 | -0.802067 | 6.689785e-49 | -8.615850e-47 |
| Msa0385320 | Msa1346010 | 0.931148 | 5.792269e-94 | -8.615850e-47 |
| Msa0385320 | Msa1349830 | 0.820877 | 5.437705e-53 | -8.615850e-47 |
| Msa0385320 | Msa1377050 | 0.836545 | 8.787931e-57 | -8.615850e-47 |
| Msa0385320 | Msa1383790 | 0.949953 | 4.463304e-108 | -8.615850e-47 |
| Msa0385320 | Msa1387610 | 0.840845 | 6.803819e-58 | -8.615850e-47 |
| Msa0385320 | Msa1396160 | 0.853737 | 1.960994e-61 | -8.615850e-47 |
| Msa0385320 | Msa1398120 | 0.820130 | 8.070543e-53 | -8.615850e-47 |
| Msa0385320 | Msa1401110 | 0.821223 | 4.527039e-53 | -8.615850e-47 |
| Msa0385320 | Msa1414340 | 0.803112 | 4.071782e-49 | -8.615850e-47 |
| Msa0385320 | Msa1422230 | 0.815904 | 7.278675e-52 | -8.615850e-47 |
| Msa0385320 | Msa1438160 | 0.820253 | 7.563505e-53 | -8.615850e-47 |
| Msa0385320 | Msa1449470 | 0.831600 | 1.522525e-55 | -8.615850e-47 |
| Msa0385320 | Msa1453600 | 0.887169 | 1.806601e-72 | -8.615850e-47 |
| Msa0385320 | Msa1459920 | 0.825485 | 4.568900e-54 | -8.615850e-47 |
| Msa0385320 | Msa1459930 | 0.841674 | 4.117879e-58 | -8.615850e-47 |
| Msa0246140 | Msa0385320 | 0.824798 | 6.641631e-54 | -8.615850e-47 |
| Msa0262360 | Msa0385320 | 0.805856 | 1.090509e-49 | -8.615850e-47 |
| Msa0267900 | Msa0385320 | 0.820158 | 7.949933e-53 | -8.615850e-47 |
| Msa0300140 | Msa0385320 | 0.803211 | 3.883964e-49 | -8.615850e-47 |
| Msa0319680 | Msa0385320 | 0.804800 | 1.814926e-49 | -8.615850e-47 |
| Msa0332360 | Msa0385320 | 0.846201 | 2.519578e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0385320 | MtrunA17_Chr3g0142751 | 96.053 | 608 | 24 | 0 | 1 | 608 | 1 | 608 | 0.0 | 1204 |
| Msa0385320 | MtrunA17_Chr1g0156671 | 58.185 | 617 | 224 | 9 | 1 | 606 | 1 | 594 | 0.0 | 684 |
| Msa0385320 | MtrunA17_Chr1g0200831 | 52.039 | 515 | 228 | 6 | 76 | 584 | 112 | 613 | 6.65e-172 | 503 |
| Msa0385320 | MtrunA17_Chr8g0385111 | 43.797 | 532 | 267 | 7 | 39 | 560 | 69 | 578 | 1.89e-129 | 394 |
| Msa0385320 | MtrunA17_Chr3g0130981 | 49.626 | 401 | 193 | 5 | 76 | 473 | 94 | 488 | 2.50e-123 | 377 |
| Msa0385320 | MtrunA17_Chr1g0188181 | 24.424 | 434 | 247 | 7 | 120 | 483 | 154 | 576 | 2.09e-28 | 120 |
| Msa0385320 | MtrunA17_Chr1g0168081 | 32.536 | 209 | 131 | 3 | 122 | 327 | 43 | 244 | 3.77e-19 | 91.3 |
| Msa0385320 | MtrunA17_Chr1g0168081 | 31.646 | 158 | 93 | 3 | 340 | 493 | 437 | 583 | 1.50e-14 | 77.0 |
| Msa0385320 | MtrunA17_Chr1g0186481 | 30.660 | 212 | 134 | 4 | 122 | 328 | 46 | 249 | 9.30e-17 | 84.0 |
| Msa0385320 | MtrunA17_Chr1g0186481 | 33.526 | 173 | 98 | 5 | 325 | 493 | 394 | 553 | 2.55e-15 | 79.3 |
| Msa0385320 | MtrunA17_Chr1g0179471 | 34.014 | 147 | 83 | 3 | 340 | 484 | 384 | 518 | 1.67e-16 | 82.8 |
| Msa0385320 | MtrunA17_Chr6g0475791 | 36.364 | 165 | 87 | 6 | 326 | 483 | 301 | 454 | 1.70e-15 | 79.3 |
| Msa0385320 | MtrunA17_Chr6g0475791 | 25.893 | 224 | 152 | 4 | 120 | 336 | 34 | 250 | 4.92e-13 | 71.6 |
| Msa0385320 | MtrunA17_Chr1g0198031 | 32.237 | 152 | 89 | 3 | 341 | 488 | 433 | 574 | 4.86e-14 | 75.1 |
| Msa0385320 | MtrunA17_Chr1g0198031 | 25.701 | 214 | 151 | 3 | 117 | 327 | 21 | 229 | 5.69e-14 | 75.1 |
| Msa0385320 | MtrunA17_Chr3g0126591 | 32.237 | 152 | 86 | 3 | 340 | 484 | 423 | 564 | 8.25e-13 | 71.2 |
| Msa0385320 | MtrunA17_Chr3g0126591 | 28.774 | 212 | 137 | 5 | 122 | 327 | 26 | 229 | 5.63e-11 | 65.5 |
| Msa0385320 | MtrunA17_Chr7g0265631 | 31.544 | 149 | 86 | 2 | 343 | 485 | 396 | 534 | 1.47e-12 | 70.5 |
| Msa0385320 | MtrunA17_Chr7g0265631 | 26.977 | 215 | 142 | 5 | 122 | 329 | 29 | 235 | 1.71e-12 | 70.1 |
| Msa0385320 | MtrunA17_Chr4g0009451 | 25.234 | 214 | 154 | 2 | 122 | 329 | 19 | 232 | 2.09e-12 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0385320 | AT1G30755.5 | 48.154 | 623 | 293 | 9 | 1 | 606 | 1 | 610 | 0.0 | 533 |
| Msa0385320 | AT1G30755.1 | 48.154 | 623 | 293 | 9 | 1 | 606 | 1 | 610 | 0.0 | 533 |
| Msa0385320 | AT1G30755.6 | 48.154 | 623 | 293 | 9 | 1 | 606 | 1 | 610 | 0.0 | 533 |
| Msa0385320 | AT1G34320.1 | 49.808 | 520 | 234 | 9 | 76 | 581 | 105 | 611 | 3.17e-161 | 476 |
| Msa0385320 | AT1G34320.2 | 49.808 | 520 | 234 | 9 | 76 | 581 | 105 | 611 | 3.17e-161 | 476 |
| Msa0385320 | AT1G30755.3 | 52.980 | 453 | 201 | 4 | 1 | 441 | 1 | 453 | 1.13e-155 | 455 |
| Msa0385320 | AT1G30755.4 | 51.708 | 439 | 200 | 4 | 1 | 427 | 1 | 439 | 4.59e-143 | 422 |
| Msa0385320 | AT1G30755.2 | 51.708 | 439 | 200 | 4 | 1 | 427 | 1 | 439 | 4.59e-143 | 422 |
| Msa0385320 | AT5G08660.3 | 46.154 | 494 | 236 | 10 | 76 | 560 | 103 | 575 | 2.35e-129 | 394 |
| Msa0385320 | AT5G08660.1 | 46.154 | 494 | 236 | 10 | 76 | 560 | 103 | 575 | 2.35e-129 | 394 |
| Msa0385320 | AT5G08660.4 | 46.154 | 494 | 236 | 10 | 76 | 560 | 103 | 575 | 2.35e-129 | 394 |
| Msa0385320 | AT5G08660.2 | 52.151 | 372 | 168 | 4 | 76 | 441 | 103 | 470 | 7.33e-113 | 346 |
| Msa0385320 | AT5G51670.1 | 24.941 | 421 | 251 | 8 | 122 | 483 | 37 | 451 | 3.07e-26 | 112 |
| Msa0385320 | AT5G51670.2 | 24.941 | 421 | 251 | 8 | 122 | 483 | 37 | 451 | 3.07e-26 | 112 |
| Msa0385320 | AT3G23160.1 | 29.439 | 214 | 138 | 4 | 122 | 330 | 43 | 248 | 5.43e-17 | 84.7 |
| Msa0385320 | AT3G23160.1 | 32.692 | 156 | 89 | 4 | 343 | 493 | 361 | 505 | 1.93e-14 | 76.6 |
| Msa0385320 | AT5G04550.1 | 30.921 | 152 | 88 | 2 | 339 | 483 | 429 | 570 | 2.06e-12 | 70.5 |
| Msa0385320 | AT5G04550.1 | 28.372 | 215 | 133 | 5 | 122 | 327 | 26 | 228 | 2.15e-12 | 70.5 |
| Msa0385320 | AT5G04550.2 | 30.921 | 152 | 88 | 2 | 339 | 483 | 429 | 570 | 2.06e-12 | 70.5 |
| Msa0385320 | AT5G04550.2 | 28.372 | 215 | 133 | 5 | 122 | 327 | 26 | 228 | 2.15e-12 | 70.5 |
Find 170 sgRNAs with CRISPR-Local
Find 448 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGGAGGTTATACCTCTTTC+TGG | 0.206036 | 3_1:-88816736 | None:intergenic |
| CACTAGAAAGGGCTCTTTAT+TGG | 0.209748 | 3_1:+88813779 | Msa0385320:CDS |
| TATAATGTGTCCCTCGTATT+TGG | 0.226029 | 3_1:-88816653 | None:intergenic |
| GCGAATTGGGTTGCTTTCTT+TGG | 0.239633 | 3_1:-88817334 | None:intergenic |
| ACTTGGAGGGATGAACAATT+TGG | 0.261598 | 3_1:+88812382 | Msa0385320:CDS |
| CTGTTTGTTCGGCGGGGATG+GGG | 0.262647 | 3_1:+88812342 | Msa0385320:CDS |
| AGCTGTTTGTTCGGCGGGGA+TGG | 0.294101 | 3_1:+88812340 | Msa0385320:CDS |
| GCTGTTTGTTCGGCGGGGAT+GGG | 0.295470 | 3_1:+88812341 | Msa0385320:CDS |
| TGTTTACATTATTGAATTGT+TGG | 0.296282 | 3_1:+88817395 | Msa0385320:CDS |
| CTTGGAGGGATGAACAATTT+GGG | 0.298151 | 3_1:+88812383 | Msa0385320:CDS |
| AGTATGTAGATTATTATAAA+AGG | 0.300075 | 3_1:-88812265 | None:intergenic |
| ATATACCTCCTCTAAATATC+TGG | 0.305237 | 3_1:-88815373 | None:intergenic |
| TTCACCTGATAAGGAGTTCT+TGG | 0.308165 | 3_1:+88817722 | Msa0385320:CDS |
| AAGCAAAACAAGCTAGAAAA+TGG | 0.311419 | 3_1:+88812488 | Msa0385320:CDS |
| ATGAACAATTTGGGGTTCTC+TGG | 0.312989 | 3_1:+88812392 | Msa0385320:CDS |
| AGAAAGTGAGTGAAATAAAA+TGG | 0.316068 | 3_1:-88813958 | None:intergenic |
| TATTGGGTAAAGCTAGCTAT+AGG | 0.317617 | 3_1:+88813796 | Msa0385320:CDS |
| TTTGGTCTTGAGAGGGTGCC+TGG | 0.318517 | 3_1:-88817688 | None:intergenic |
| CTATCCACTTCCGCTTCAAT+TGG | 0.319467 | 3_1:+88812530 | Msa0385320:CDS |
| TAAAATCATGAGTTTATATA+TGG | 0.322145 | 3_1:-88817940 | None:intergenic |
| TCACGGGAAGTAGTTAGATT+TGG | 0.323364 | 3_1:+88814199 | Msa0385320:CDS |
| AACATCTATCTTCTGCTTAT+CGG | 0.328434 | 3_1:-88817376 | None:intergenic |
| CCACCACAACTATAACGTTT+TGG | 0.340346 | 3_1:+88817764 | Msa0385320:CDS |
| TCTTTGGTCCAGATATTTAG+AGG | 0.343093 | 3_1:+88815365 | Msa0385320:CDS |
| ACTAGAAAGGGCTCTTTATT+GGG | 0.349692 | 3_1:+88813780 | Msa0385320:CDS |
| GTGAAATAAAATGGCTCCTT+TGG | 0.349733 | 3_1:-88813949 | None:intergenic |
| AGGGAAGAAAATATCAATAT+TGG | 0.349870 | 3_1:+88813902 | Msa0385320:CDS |
| GTTCATAAGCACTTAATTCA+TGG | 0.354686 | 3_1:-88814819 | None:intergenic |
| TAAAGTGTCTGGAGGCGAAT+TGG | 0.362664 | 3_1:-88817348 | None:intergenic |
| AGCAAAGGAGAATTATGAAA+TGG | 0.363651 | 3_1:-88812239 | None:intergenic |
| AGGTGAACTCCCAGCACTTT+TGG | 0.367675 | 3_1:-88817706 | None:intergenic |
| CAGATTAGACTTGGATGTCT+TGG | 0.372829 | 3_1:+88814403 | Msa0385320:intron |
| TCTAATAATATCCTATCTTC+TGG | 0.378873 | 3_1:-88817591 | None:intergenic |
| GTACCCAAGAACTCCTTATC+AGG | 0.382837 | 3_1:-88817726 | None:intergenic |
| GTATTTGGAGGAAGGGAGGC+TGG | 0.382938 | 3_1:-88816638 | None:intergenic |
| CCAGCTTCACCTAGTCTTTG+AGG | 0.388523 | 3_1:-88816475 | None:intergenic |
| CGCATCTTAGACTGAAGTTC+AGG | 0.389412 | 3_1:-88817510 | None:intergenic |
| AACAGGGCTCATCAAGGCTT+TGG | 0.390105 | 3_1:+88817127 | Msa0385320:intron |
| TACCTCTTTCTGGATAGAAA+TGG | 0.393069 | 3_1:-88816726 | None:intergenic |
| ACAATTAGTCTCAACAGATA+TGG | 0.394875 | 3_1:+88814034 | Msa0385320:CDS |
| CCACCACTGGTGTTTAACTT+TGG | 0.408588 | 3_1:-88813855 | None:intergenic |
| CTTTGGATGGGTTGGTGAAT+GGG | 0.411171 | 3_1:+88817144 | Msa0385320:CDS |
| GCTTTGGATGGGTTGGTGAA+TGG | 0.411360 | 3_1:+88817143 | Msa0385320:CDS |
| CGTGAGTTCCTTGGAAATCA+TGG | 0.412240 | 3_1:+88815640 | Msa0385320:CDS |
| ATTGGGTAAAGCTAGCTATA+GGG | 0.415408 | 3_1:+88813797 | Msa0385320:CDS |
| ACGAATTGCTTGATGTATAT+AGG | 0.416690 | 3_1:-88815620 | None:intergenic |
| TGCTGGGAGTTCACCTGATA+AGG | 0.417744 | 3_1:+88817713 | Msa0385320:CDS |
| ATGGGAGCTGTTTGTTCGGC+GGG | 0.424396 | 3_1:+88812335 | Msa0385320:CDS |
| AGGGCACTCTTAATACTGTT+TGG | 0.425261 | 3_1:-88816686 | None:intergenic |
| TTGGATATTATGGATGGCTT+AGG | 0.426323 | 3_1:+88817783 | Msa0385320:CDS |
| CAAGCAATTCGTGAGTTCCT+TGG | 0.428629 | 3_1:+88815631 | Msa0385320:CDS |
| ACCAGTGGTGGGTTTGTCTC+TGG | 0.431852 | 3_1:+88813867 | Msa0385320:CDS |
| TATCCACTTCCGCTTCAATT+GGG | 0.432097 | 3_1:+88812531 | Msa0385320:CDS |
| CTCTGGGAAGGTTCTTAAGA+AGG | 0.438542 | 3_1:+88812409 | Msa0385320:CDS |
| AGACTGAAGTTCAGGTCTCT+TGG | 0.440141 | 3_1:-88817502 | None:intergenic |
| AATTTCAAGGAGGAGGAGCC+CGG | 0.440803 | 3_1:+88817620 | Msa0385320:CDS |
| TTGATTGTATTTGCCGCAAA+TGG | 0.442663 | 3_1:-88816953 | None:intergenic |
| AGAAGATAGGATATTATTAG+AGG | 0.443661 | 3_1:+88817593 | Msa0385320:CDS |
| AGATTAGACTTGGATGTCTT+GGG | 0.448582 | 3_1:+88814404 | Msa0385320:intron |
| CATCAAGGCTTTGGATGGGT+TGG | 0.449569 | 3_1:+88817136 | Msa0385320:CDS |
| GCAAAGGAGAATTATGAAAT+GGG | 0.450142 | 3_1:-88812238 | None:intergenic |
| AAAGTGTCTGGAGGCGAATT+GGG | 0.454666 | 3_1:-88817347 | None:intergenic |
| GAGAGCAATGCAGAAGAACT+TGG | 0.459267 | 3_1:+88812365 | Msa0385320:CDS |
| GACCGTGTGGGCATTGCCAT+TGG | 0.460170 | 3_1:-88817471 | None:intergenic |
| TATTAGAGGAGGTAATTTCA+AGG | 0.460679 | 3_1:+88817607 | Msa0385320:CDS |
| TGAACAATTTGGGGTTCTCT+GGG | 0.462361 | 3_1:+88812393 | Msa0385320:CDS |
| TGTTTGTTCGGCGGGGATGG+GGG | 0.464288 | 3_1:+88812343 | Msa0385320:CDS |
| ACATTATTGAATTGTTGGTA+TGG | 0.467171 | 3_1:+88817400 | Msa0385320:CDS |
| CTCAACTTTCTCCAGAAGAT+AGG | 0.474373 | 3_1:+88817580 | Msa0385320:CDS |
| TCACCTGATAAGGAGTTCTT+GGG | 0.476603 | 3_1:+88817723 | Msa0385320:CDS |
| CTTATCATAGGTCACTAGAA+AGG | 0.481697 | 3_1:+88813767 | Msa0385320:intron |
| TACCAAGAATCTTCAAAAGA+AGG | 0.482492 | 3_1:-88817849 | None:intergenic |
| GGGCTCATCAAGGCTTTGGA+TGG | 0.482723 | 3_1:+88817131 | Msa0385320:intron |
| TTCCCCAATTGAAGCGGAAG+TGG | 0.483971 | 3_1:-88812534 | None:intergenic |
| GACAGAAACAACAAGCCATT+GGG | 0.486617 | 3_1:+88817555 | Msa0385320:CDS |
| CCTCTCAAGACCAAAAGTGC+TGG | 0.487668 | 3_1:+88817696 | Msa0385320:CDS |
| CTCTCAAGACCAAAAGTGCT+GGG | 0.492885 | 3_1:+88817697 | Msa0385320:CDS |
| TATCGGCGTAGTAAAGTGTC+TGG | 0.492972 | 3_1:-88817359 | None:intergenic |
| AATGAATGGTGAATAATTGT+CGG | 0.494153 | 3_1:-88817888 | None:intergenic |
| ACCTTTCAGAGGAAGATTCA+AGG | 0.494840 | 3_1:-88814884 | None:intergenic |
| CAATTTGGGGTTCTCTGGGA+AGG | 0.497243 | 3_1:+88812397 | Msa0385320:CDS |
| TGACATTGCAGTAACGACTT+TGG | 0.497519 | 3_1:+88817300 | Msa0385320:intron |
| GGAGAATTATGAAATGGGTT+GGG | 0.497541 | 3_1:-88812233 | None:intergenic |
| AGGAGAATTATGAAATGGGT+TGG | 0.498869 | 3_1:-88812234 | None:intergenic |
| TTATCATAGGTCACTAGAAA+GGG | 0.499151 | 3_1:+88813768 | Msa0385320:intron |
| AACGTTATAGTTGTGGTGGT+TGG | 0.507765 | 3_1:-88817760 | None:intergenic |
| AGGAGGTAATTTCAAGGAGG+AGG | 0.509239 | 3_1:+88817613 | Msa0385320:CDS |
| GATGTAGGTTGTGCCATTGT+GGG | 0.511411 | 3_1:-88814237 | None:intergenic |
| CGATGTAGGTTGTGCCATTG+TGG | 0.512886 | 3_1:-88814238 | None:intergenic |
| ATCCATTTCTATCCAGAAAG+AGG | 0.516436 | 3_1:+88816724 | Msa0385320:CDS |
| AGACAGAAACAACAAGCCAT+TGG | 0.517679 | 3_1:+88817554 | Msa0385320:CDS |
| CCTCAAAGACTAGGTGAAGC+TGG | 0.518624 | 3_1:+88816475 | Msa0385320:CDS |
| ACGAGGGACACATTATATCA+AGG | 0.522467 | 3_1:+88816659 | Msa0385320:CDS |
| AAGAATTAAATGTATTCTCA+CGG | 0.524963 | 3_1:+88814182 | Msa0385320:CDS |
| TATTATAAAAGGAGAAGCAA+AGG | 0.526644 | 3_1:-88812254 | None:intergenic |
| ATGAAATATCAGATTAGACT+TGG | 0.530537 | 3_1:+88814394 | Msa0385320:intron |
| GGCTCATCAAGGCTTTGGAT+GGG | 0.531203 | 3_1:+88817132 | Msa0385320:CDS |
| CATTCAGTTCCTCAAGAAGG+AGG | 0.532398 | 3_1:+88813989 | Msa0385320:CDS |
| AATTTAAAACCTCCTTCTTG+AGG | 0.532695 | 3_1:-88813998 | None:intergenic |
| GTGGAAGTTCTTGATACACT+TGG | 0.535597 | 3_1:+88813822 | Msa0385320:CDS |
| TTCCGCTTTGATATGAGTGA+AGG | 0.542865 | 3_1:-88816903 | None:intergenic |
| ATCCACTTCCGCTTCAATTG+GGG | 0.545527 | 3_1:+88812532 | Msa0385320:CDS |
| TCCTTGAATCTTCCTCTGAA+AGG | 0.546389 | 3_1:+88814883 | Msa0385320:CDS |
| GGTGCTGTCAAGTATACTAA+AGG | 0.548639 | 3_1:+88816451 | Msa0385320:CDS |
| TATTTGGAGGAAGGGAGGCT+GGG | 0.551779 | 3_1:-88816637 | None:intergenic |
| GTTCTTGATACACTTGGAAG+TGG | 0.551965 | 3_1:+88813828 | Msa0385320:CDS |
| CTGCCAAGAAAACTCATGCC+AGG | 0.553142 | 3_1:+88817670 | Msa0385320:CDS |
| CCAAAGTTAAACACCAGTGG+TGG | 0.555780 | 3_1:+88813855 | Msa0385320:CDS |
| GCCAGAGACAAACCCACCAC+TGG | 0.556299 | 3_1:-88813868 | None:intergenic |
| AGAATTAAATGTATTCTCAC+GGG | 0.556492 | 3_1:+88814183 | Msa0385320:CDS |
| TATCCAAAACGTTATAGTTG+TGG | 0.558251 | 3_1:-88817767 | None:intergenic |
| TCAGTGGCTCGTACCATTTG+CGG | 0.558291 | 3_1:+88816940 | Msa0385320:CDS |
| GTCTCTGGCAAGCTTTCCAG+AGG | 0.561603 | 3_1:+88813882 | Msa0385320:CDS |
| AAACATTCAGTTCCTCAAGA+AGG | 0.562368 | 3_1:+88813986 | Msa0385320:CDS |
| ATCTTACAGAGCTAATCAAA+TGG | 0.562545 | 3_1:-88817428 | None:intergenic |
| TTGGAGGGATGAACAATTTG+GGG | 0.565256 | 3_1:+88812384 | Msa0385320:CDS |
| TGGATTGCAACCGAGATGGA+AGG | 0.565419 | 3_1:-88816706 | None:intergenic |
| GAAATGGATTGCAACCGAGA+TGG | 0.566963 | 3_1:-88816710 | None:intergenic |
| TGTCCCTCGTATTTGGAGGA+AGG | 0.567652 | 3_1:-88816646 | None:intergenic |
| AATGTGTCCCTCGTATTTGG+AGG | 0.568090 | 3_1:-88816650 | None:intergenic |
| AGATGCCGAAAAGACAATGC+AGG | 0.570619 | 3_1:+88814445 | Msa0385320:CDS |
| ATTAGCAAAAGTGAGGAACT+TGG | 0.571334 | 3_1:+88817645 | Msa0385320:CDS |
| GTCCCTCGTATTTGGAGGAA+GGG | 0.574579 | 3_1:-88816645 | None:intergenic |
| ACAAAATGCCTCGAGGCCAA+TGG | 0.577458 | 3_1:+88817455 | Msa0385320:CDS |
| ATTTCAAGGAGGAGGAGCCC+GGG | 0.577633 | 3_1:+88817621 | Msa0385320:CDS |
| TGAAGTTCAGGTCTCTTGGA+AGG | 0.578768 | 3_1:-88817498 | None:intergenic |
| CCAAAACGTTATAGTTGTGG+TGG | 0.583947 | 3_1:-88817764 | None:intergenic |
| TTAAGAGTGCCCTTCCATCT+CGG | 0.586379 | 3_1:+88816696 | Msa0385320:CDS |
| GGCCAATGGCAATGCCCACA+CGG | 0.587290 | 3_1:+88817469 | Msa0385320:CDS |
| AATGGGAGCTGTTTGTTCGG+CGG | 0.589590 | 3_1:+88812334 | Msa0385320:exon |
| ATTGTTAACAGGGCTCATCA+AGG | 0.593222 | 3_1:+88817121 | Msa0385320:intron |
| AGATAGGATATTATTAGAGG+AGG | 0.593450 | 3_1:+88817596 | Msa0385320:CDS |
| TAAAGCTAGCTATAGGGCGG+TGG | 0.594166 | 3_1:+88813803 | Msa0385320:CDS |
| TGTTCATACCATGATTTCCA+AGG | 0.595508 | 3_1:-88815648 | None:intergenic |
| GGATTGCAACCGAGATGGAA+GGG | 0.595874 | 3_1:-88816705 | None:intergenic |
| TAGAGGAGGTAATTTCAAGG+AGG | 0.599131 | 3_1:+88817610 | Msa0385320:CDS |
| ATATATCTGATTGATCATGT+TGG | 0.602694 | 3_1:-88816515 | None:intergenic |
| TCTAAGTTCTAACCTTTCAG+AGG | 0.602716 | 3_1:-88814895 | None:intergenic |
| GGAGAAAGTTGAGTTCCCAA+TGG | 0.606564 | 3_1:-88817570 | None:intergenic |
| ACTAAAGGTCCTCAAAGACT+AGG | 0.608726 | 3_1:+88816466 | Msa0385320:CDS |
| AGTGGATAGACCGAATTCAT+CGG | 0.617545 | 3_1:-88812516 | None:intergenic |
| GCAATGCAGAAGAACTTGGA+GGG | 0.623845 | 3_1:+88812369 | Msa0385320:CDS |
| CAAAGTTAAACACCAGTGGT+GGG | 0.625267 | 3_1:+88813856 | Msa0385320:CDS |
| CCTCCCTTCCTCCAAATACG+AGG | 0.628725 | 3_1:+88816642 | Msa0385320:CDS |
| ACCTTGAGAAATGTCGATGT+AGG | 0.628997 | 3_1:-88814252 | None:intergenic |
| GGGCATTGCCATTGGCCTCG+AGG | 0.630544 | 3_1:-88817463 | None:intergenic |
| ACCTACATCGACATTTCTCA+AGG | 0.631682 | 3_1:+88814251 | Msa0385320:CDS |
| TTGGTGAATGGGCAAACACA+AGG | 0.636366 | 3_1:+88817155 | Msa0385320:CDS |
| CCTCGTATTTGGAGGAAGGG+AGG | 0.639013 | 3_1:-88816642 | None:intergenic |
| GTAGCTAATACAATAACCAA+AGG | 0.639145 | 3_1:+88813933 | Msa0385320:CDS |
| GCTGAGAATTTACGACTCTG+AGG | 0.643521 | 3_1:-88812195 | None:intergenic |
| CTCCCTTCCTCCAAATACGA+GGG | 0.644751 | 3_1:+88816643 | Msa0385320:CDS |
| TTGGTCCAGATATTTAGAGG+AGG | 0.646740 | 3_1:+88815368 | Msa0385320:CDS |
| AGTTCAGGTCTCTTGGAAGG+AGG | 0.660563 | 3_1:-88817495 | None:intergenic |
| AGCAATGCAGAAGAACTTGG+AGG | 0.662834 | 3_1:+88812368 | Msa0385320:CDS |
| CTCCTTCACTCATATCAAAG+CGG | 0.662984 | 3_1:+88816901 | Msa0385320:CDS |
| CCCGGGAATTAGCAAAAGTG+AGG | 0.666356 | 3_1:+88817638 | Msa0385320:CDS |
| CTTGGAAGGAGGAGACCGTG+TGG | 0.669539 | 3_1:-88817484 | None:intergenic |
| TTGGAAGGAGGAGACCGTGT+GGG | 0.672365 | 3_1:-88817483 | None:intergenic |
| CGGCGTAGTAAAGTGTCTGG+AGG | 0.672625 | 3_1:-88817356 | None:intergenic |
| TCTCTGGCAAGCTTTCCAGA+GGG | 0.673396 | 3_1:+88813883 | Msa0385320:CDS |
| TGGGAGCTGTTTGTTCGGCG+GGG | 0.678824 | 3_1:+88812336 | Msa0385320:CDS |
| ATGCCAAAGTTAAACACCAG+TGG | 0.681956 | 3_1:+88813852 | Msa0385320:CDS |
| GTGGTGGTTGGCGATGAGTG+TGG | 0.685493 | 3_1:-88817748 | None:intergenic |
| CTGAACTTCAGTCTAAGATG+CGG | 0.686840 | 3_1:+88817511 | Msa0385320:CDS |
| AAATGAATAAGACTCTTCAG+TGG | 0.700574 | 3_1:+88816924 | Msa0385320:CDS |
| GGGTAAAGCTAGCTATAGGG+CGG | 0.706000 | 3_1:+88813800 | Msa0385320:CDS |
| ATATGTGTAAAGACCCACAA+TGG | 0.711309 | 3_1:+88814224 | Msa0385320:CDS |
| TAGTCTAGTTCATCATACTG+CGG | 0.726979 | 3_1:+88814475 | Msa0385320:CDS |
| GATCCAGACAAAATGCCTCG+AGG | 0.746283 | 3_1:+88817448 | Msa0385320:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAACAATCTATATAAATTA+GGG | - | chr3_1:88813531-88813550 | None:intergenic | 10.0% |
| !! | ATAAACAATCTATATAAATT+AGG | - | chr3_1:88813532-88813551 | None:intergenic | 10.0% |
| !!! | TTATCTTTTTGAAATTTTTA+GGG | + | chr3_1:88814159-88814178 | Msa0385320:intron | 10.0% |
| !! | TTTATTAATTAATTATGAGT+TGG | - | chr3_1:88814339-88814358 | None:intergenic | 10.0% |
| !! | ATATATAATATAAAAGATCT+AGG | - | chr3_1:88814624-88814643 | None:intergenic | 10.0% |
| !!! | AATATATTTTTGACAAAAAA+AGG | - | chr3_1:88815134-88815153 | None:intergenic | 10.0% |
| !!! | ATTTAAAATAAAAATTAGCA+GGG | - | chr3_1:88816115-88816134 | None:intergenic | 10.0% |
| !!! | AATTTAAAATAAAAATTAGC+AGG | - | chr3_1:88816116-88816135 | None:intergenic | 10.0% |
| !! | AGTATGTAGATTATTATAAA+AGG | - | chr3_1:88812268-88812287 | None:intergenic | 15.0% |
| !! | AAGAAGAATACAAATAAAAA+TGG | + | chr3_1:88812316-88812335 | Msa0385320:exon | 15.0% |
| !! | AGAAGAATACAAATAAAAAT+GGG | + | chr3_1:88812317-88812336 | Msa0385320:exon | 15.0% |
| !!! | CTTATCTTTTTGAAATTTTT+AGG | + | chr3_1:88814158-88814177 | Msa0385320:intron | 15.0% |
| !! | TGATTATCAACAAAAAATTA+AGG | + | chr3_1:88814852-88814871 | Msa0385320:CDS | 15.0% |
| !! | TTATTAAAATGAATACTTCT+TGG | + | chr3_1:88814973-88814992 | Msa0385320:intron | 15.0% |
| !!! | ATGTATATTGTAAATTTTTC+TGG | + | chr3_1:88816059-88816078 | Msa0385320:intron | 15.0% |
| !! | AAATTGTACAAAAAAATGAA+TGG | - | chr3_1:88817905-88817924 | None:intergenic | 15.0% |
| !! | TAAAATCATGAGTTTATATA+TGG | - | chr3_1:88817943-88817962 | None:intergenic | 15.0% |
| !!! | TCTTTTATAGTTAAGACTTA+AGG | + | chr3_1:88812664-88812683 | Msa0385320:intron | 20.0% |
| !! | AAGATAAACTCCTAAAATTA+TGG | + | chr3_1:88813012-88813031 | Msa0385320:intron | 20.0% |
| !! | AGTGATACTAATAGTAAAAA+GGG | - | chr3_1:88813304-88813323 | None:intergenic | 20.0% |
| !! | AATCTATATAAATTAGGGAA+GGG | - | chr3_1:88813526-88813545 | None:intergenic | 20.0% |
| !! | AAATTCATAGCAAAAACAAA+AGG | - | chr3_1:88814120-88814139 | None:intergenic | 20.0% |
| !! | TTTCAAAAAGATAAGTGATA+AGG | - | chr3_1:88814153-88814172 | None:intergenic | 20.0% |
| !! | AAGAATTAAATGTATTCTCA+CGG | + | chr3_1:88814182-88814201 | Msa0385320:CDS | 20.0% |
| !!! | CTAATCTGATATTTCATTTT+CGG | - | chr3_1:88814391-88814410 | None:intergenic | 20.0% |
| !! | AGAAACTAAAAAAATGACAA+TGG | - | chr3_1:88814574-88814593 | None:intergenic | 20.0% |
| !! | TATAAAAGATCTAGGAATTA+AGG | - | chr3_1:88814616-88814635 | None:intergenic | 20.0% |
| !!! | TAATTTTCTCGTTTTAATGT+AGG | + | chr3_1:88814789-88814808 | Msa0385320:intron | 20.0% |
| !! | TCAACAAAAAATTAAGGAAA+TGG | + | chr3_1:88814858-88814877 | Msa0385320:CDS | 20.0% |
| !!! | CTATTTTATCTTAACATTTG+AGG | + | chr3_1:88815032-88815051 | Msa0385320:intron | 20.0% |
| !! | TTGAAAACCAAATTCTTATT+GGG | - | chr3_1:88815082-88815101 | None:intergenic | 20.0% |
| !! | TTTGAAAACCAAATTCTTAT+TGG | - | chr3_1:88815083-88815102 | None:intergenic | 20.0% |
| !!! | TTCTGAGGATTTAAATTTTT+AGG | - | chr3_1:88815228-88815247 | None:intergenic | 20.0% |
| !!! | AGGAGGTATATTATTAATAA+AGG | + | chr3_1:88815385-88815404 | Msa0385320:intron | 20.0% |
| !!! | TTTTCTTCAATAAAAAGAGA+AGG | - | chr3_1:88815807-88815826 | None:intergenic | 20.0% |
| !! | AAAATGAGCATAAAAAAGAT+TGG | - | chr3_1:88815895-88815914 | None:intergenic | 20.0% |
| !!! | TTCTTCTAAATCATTTTTTC+TGG | + | chr3_1:88816195-88816214 | Msa0385320:intron | 20.0% |
| !! | ACGAAAACATTTATTTGATT+AGG | - | chr3_1:88816582-88816601 | None:intergenic | 20.0% |
| !!! | TCTAGTCCTTTTTAATTTTT+TGG | + | chr3_1:88816788-88816807 | Msa0385320:intron | 20.0% |
| !! | AATAAATTTCAATCTTCAAG+AGG | - | chr3_1:88816838-88816857 | None:intergenic | 20.0% |
| !! | TTGAATTATGCTAAATGTAA+TGG | + | chr3_1:88816863-88816882 | Msa0385320:intron | 20.0% |
| !!! | AAAAATATTTAAAACCTGAC+AGG | - | chr3_1:88817016-88817035 | None:intergenic | 20.0% |
| !! | TGTTTACATTATTGAATTGT+TGG | + | chr3_1:88817395-88817414 | Msa0385320:CDS | 20.0% |
| ! | TATTATAAAAGGAGAAGCAA+AGG | - | chr3_1:88812257-88812276 | None:intergenic | 25.0% |
| !! | AGGAAAACAGTTTTACAAAT+CGG | + | chr3_1:88812429-88812448 | Msa0385320:CDS | 25.0% |
| !!! | AAGATGATTTTTCAGATTCA+AGG | + | chr3_1:88812453-88812472 | Msa0385320:CDS | 25.0% |
| !!! | TTTAACATATTTTGAGGTCT+CGG | - | chr3_1:88812729-88812748 | None:intergenic | 25.0% |
| !!! | TTGAACATGGTTTTAAATTG+CGG | - | chr3_1:88812765-88812784 | None:intergenic | 25.0% |
| !!! | TCAAACTTTTTTTGAGAACT+CGG | + | chr3_1:88812808-88812827 | Msa0385320:intron | 25.0% |
| ! | TTATCTTACTTAACCCATTT+GGG | - | chr3_1:88812999-88813018 | None:intergenic | 25.0% |
| ! | TTTATCTTACTTAACCCATT+TGG | - | chr3_1:88813000-88813019 | None:intergenic | 25.0% |
| ! | GAGTGATACTAATAGTAAAA+AGG | - | chr3_1:88813305-88813324 | None:intergenic | 25.0% |
| ! | ATCTATATAAATTAGGGAAG+GGG | - | chr3_1:88813525-88813544 | None:intergenic | 25.0% |
| ! | CAATCTATATAAATTAGGGA+AGG | - | chr3_1:88813527-88813546 | None:intergenic | 25.0% |
| !!! | AGTAAAAAAGTACTGAAGTT+AGG | - | chr3_1:88813654-88813673 | None:intergenic | 25.0% |
| ! | AGGGAAGAAAATATCAATAT+TGG | + | chr3_1:88813902-88813921 | Msa0385320:CDS | 25.0% |
| ! | AGAAAGTGAGTGAAATAAAA+TGG | - | chr3_1:88813961-88813980 | None:intergenic | 25.0% |
| ! | AGAATTAAATGTATTCTCAC+GGG | + | chr3_1:88814183-88814202 | Msa0385320:CDS | 25.0% |
| ! | ATGAAATATCAGATTAGACT+TGG | + | chr3_1:88814394-88814413 | Msa0385320:intron | 25.0% |
| !! | TGCATAATCTTTTATCTCAT+TGG | + | chr3_1:88814527-88814546 | Msa0385320:intron | 25.0% |
| !! | TTCTTTGCTTGTTAAAGTTA+GGG | + | chr3_1:88814726-88814745 | Msa0385320:intron | 25.0% |
| ! | ATACCAAGATTTGACAAAAA+GGG | - | chr3_1:88814949-88814968 | None:intergenic | 25.0% |
| ! | AATACCAAGATTTGACAAAA+AGG | - | chr3_1:88814950-88814969 | None:intergenic | 25.0% |
| !! | TTTTATCTTAACATTTGAGG+TGG | + | chr3_1:88815035-88815054 | Msa0385320:intron | 25.0% |
| ! | TAGTTATCCCAATAAGAATT+TGG | + | chr3_1:88815072-88815091 | Msa0385320:intron | 25.0% |
| ! | GTCAAAAATATATTCTTTCC+TGG | + | chr3_1:88815140-88815159 | Msa0385320:intron | 25.0% |
| ! | TTCATCTGAAAATATTTCTC+AGG | - | chr3_1:88815169-88815188 | None:intergenic | 25.0% |
| ! | AGAAGTTATCTAATGATTGA+CGG | + | chr3_1:88815244-88815263 | Msa0385320:intron | 25.0% |
| ! | ACTTGAAAAAGAAATCTCTT+TGG | + | chr3_1:88815349-88815368 | Msa0385320:CDS | 25.0% |
| ! | TAATATCCAAAACTTCATTC+AGG | - | chr3_1:88815466-88815485 | None:intergenic | 25.0% |
| ! | AATAAAAAGAGAAGGAATGT+GGG | - | chr3_1:88815799-88815818 | None:intergenic | 25.0% |
| ! | AAGAATCATGACATATAGAT+AGG | - | chr3_1:88815841-88815860 | None:intergenic | 25.0% |
| ! | TACATAGCGTTTATTTACAA+GGG | - | chr3_1:88816044-88816063 | None:intergenic | 25.0% |
| ! | ATACATAGCGTTTATTTACA+AGG | - | chr3_1:88816045-88816064 | None:intergenic | 25.0% |
| !!! | TCTAAATCATTTTTTCTGGA+TGG | + | chr3_1:88816199-88816218 | Msa0385320:intron | 25.0% |
| !!! | GGAATTCCTTAATCATTTTT+TGG | + | chr3_1:88816269-88816288 | Msa0385320:intron | 25.0% |
| ! | CACAAACCAAAAAATGATTA+AGG | - | chr3_1:88816278-88816297 | None:intergenic | 25.0% |
| ! | TAACTCATAACAACATCTAA+TGG | + | chr3_1:88816382-88816401 | Msa0385320:intron | 25.0% |
| ! | TCTAAATCGTTATGAAATTG+TGG | + | chr3_1:88816412-88816431 | Msa0385320:intron | 25.0% |
| ! | CTAAATCGTTATGAAATTGT+GGG | + | chr3_1:88816413-88816432 | Msa0385320:intron | 25.0% |
| ! | ATATATCTGATTGATCATGT+TGG | - | chr3_1:88816518-88816537 | None:intergenic | 25.0% |
| ! | TTTATTGCGCTAACAAAATT+TGG | + | chr3_1:88816552-88816571 | Msa0385320:intron | 25.0% |
| ! | TTATTGCGCTAACAAAATTT+GGG | + | chr3_1:88816553-88816572 | Msa0385320:intron | 25.0% |
| !!! | AGTCCTTTTTAATTTTTTGG+TGG | + | chr3_1:88816791-88816810 | Msa0385320:intron | 25.0% |
| !!! | GTCCTTTTTAATTTTTTGGT+GGG | + | chr3_1:88816792-88816811 | Msa0385320:intron | 25.0% |
| ! | TACCCACCAAAAAATTAAAA+AGG | - | chr3_1:88816797-88816816 | None:intergenic | 25.0% |
| !!! | TTTAATTTTTTGGTGGGTAT+TGG | + | chr3_1:88816798-88816817 | Msa0385320:intron | 25.0% |
| !!! | TTAATTTTTTGGTGGGTATT+GGG | + | chr3_1:88816799-88816818 | Msa0385320:intron | 25.0% |
| ! | GTTATTTGTTCACATTATAC+AGG | - | chr3_1:88817228-88817247 | None:intergenic | 25.0% |
| ! | TAATGTGAACAAATAACAAG+TGG | + | chr3_1:88817231-88817250 | Msa0385320:intron | 25.0% |
| ! | ACATTATTGAATTGTTGGTA+TGG | + | chr3_1:88817400-88817419 | Msa0385320:CDS | 25.0% |
| ! | TCTAATAATATCCTATCTTC+TGG | - | chr3_1:88817594-88817613 | None:intergenic | 25.0% |
| ! | AGAAGATAGGATATTATTAG+AGG | + | chr3_1:88817593-88817612 | Msa0385320:CDS | 25.0% |
| !!! | CTATAACGTTTTGGATATTA+TGG | + | chr3_1:88817773-88817792 | Msa0385320:CDS | 25.0% |
| ! | AATAATTGTCGGCATAAAAA+AGG | - | chr3_1:88817880-88817899 | None:intergenic | 25.0% |
| ! | AATGAATGGTGAATAATTGT+CGG | - | chr3_1:88817891-88817910 | None:intergenic | 25.0% |
| GCAAAGGAGAATTATGAAAT+GGG | - | chr3_1:88812241-88812260 | None:intergenic | 30.0% | |
| AGCAAAGGAGAATTATGAAA+TGG | - | chr3_1:88812242-88812261 | None:intergenic | 30.0% | |
| AAGCAAAACAAGCTAGAAAA+TGG | + | chr3_1:88812488-88812507 | Msa0385320:CDS | 30.0% | |
| ATAGTTAAGACTTAAGGACA+TGG | + | chr3_1:88812670-88812689 | Msa0385320:intron | 30.0% | |
| !!! | ATGGCTATGGTTTTAAATTG+CGG | + | chr3_1:88812689-88812708 | Msa0385320:intron | 30.0% |
| ! | ACGCGATTTAACATATTTTG+AGG | - | chr3_1:88812735-88812754 | None:intergenic | 30.0% |
| TTGAATGCAAAAATTCAGCT+TGG | - | chr3_1:88812792-88812811 | None:intergenic | 30.0% | |
| CTCCTAAAATTATGGAATTC+CGG | + | chr3_1:88813020-88813039 | Msa0385320:intron | 30.0% | |
| ! | TTCCGGAATTCCATAATTTT+AGG | - | chr3_1:88813025-88813044 | None:intergenic | 30.0% |
| AAATTATGGAATTCCGGAAA+TGG | + | chr3_1:88813026-88813045 | Msa0385320:intron | 30.0% | |
| AATTTGAACTTTGTCTCTTG+GGG | - | chr3_1:88813108-88813127 | None:intergenic | 30.0% | |
| GAATTTGAACTTTGTCTCTT+GGG | - | chr3_1:88813109-88813128 | None:intergenic | 30.0% | |
| ! | CATTTTACAAATATCCCTGA+GGG | - | chr3_1:88813131-88813150 | None:intergenic | 30.0% |
| ! | TCATTTTACAAATATCCCTG+AGG | - | chr3_1:88813132-88813151 | None:intergenic | 30.0% |
| GTATCACTTAAAAACATAGC+TGG | + | chr3_1:88813158-88813177 | Msa0385320:intron | 30.0% | |
| TGCAAATAGAAACTCCATAT+CGG | - | chr3_1:88813203-88813222 | None:intergenic | 30.0% | |
| !!! | TATCTTTTTTTCCACTTTGC+TGG | + | chr3_1:88813229-88813248 | Msa0385320:intron | 30.0% |
| !!! | ATCTTTTTTTCCACTTTGCT+GGG | + | chr3_1:88813230-88813249 | Msa0385320:intron | 30.0% |
| CATAAGTGTAATATGACAGA+AGG | + | chr3_1:88813339-88813358 | Msa0385320:intron | 30.0% | |
| TCTATATAAATTAGGGAAGG+GGG | - | chr3_1:88813524-88813543 | None:intergenic | 30.0% | |
| !! | TTCACTTTGAGATTCTAGTA+TGG | + | chr3_1:88813674-88813693 | Msa0385320:intron | 30.0% |
| GAAATTTAGTGTCTCATGAT+TGG | + | chr3_1:88813736-88813755 | Msa0385320:intron | 30.0% | |
| TTATCATAGGTCACTAGAAA+GGG | + | chr3_1:88813768-88813787 | Msa0385320:intron | 30.0% | |
| ! | TATTGATATTTTCTTCCCTC+TGG | - | chr3_1:88813901-88813920 | None:intergenic | 30.0% |
| GTAGCTAATACAATAACCAA+AGG | + | chr3_1:88813933-88813952 | Msa0385320:CDS | 30.0% | |
| ! | AATTTAAAACCTCCTTCTTG+AGG | - | chr3_1:88814001-88814020 | None:intergenic | 30.0% |
| !!! | AAGGAGGTTTTAAATTCAGA+AGG | + | chr3_1:88814005-88814024 | Msa0385320:CDS | 30.0% |
| ! | ACAATTAGTCTCAACAGATA+TGG | + | chr3_1:88814034-88814053 | Msa0385320:CDS | 30.0% |
| ! | GTTAATAAGTTTTGCTGAGA+TGG | + | chr3_1:88814061-88814080 | Msa0385320:CDS | 30.0% |
| ATAAGTGATAAGGAACACAA+AGG | - | chr3_1:88814143-88814162 | None:intergenic | 30.0% | |
| TCATAAATAAGCAACGTATC+AGG | - | chr3_1:88814284-88814303 | None:intergenic | 30.0% | |
| ACGTTGCTTATTTATGACAA+CGG | + | chr3_1:88814287-88814306 | Msa0385320:intron | 30.0% | |
| GAAAAACATATGAATACACC+TGG | - | chr3_1:88814668-88814687 | None:intergenic | 30.0% | |
| ! | GTTCTTTGCTTGTTAAAGTT+AGG | + | chr3_1:88814725-88814744 | Msa0385320:intron | 30.0% |
| !! | TTCCATTGAATGCTTTTTGT+AGG | + | chr3_1:88814750-88814769 | Msa0385320:intron | 30.0% |
| !! | AACCTACAAAAAGCATTCAA+TGG | - | chr3_1:88814755-88814774 | None:intergenic | 30.0% |
| GTTCATAAGCACTTAATTCA+TGG | - | chr3_1:88814822-88814841 | None:intergenic | 30.0% | |
| TACCAAGATTTGACAAAAAG+GGG | - | chr3_1:88814948-88814967 | None:intergenic | 30.0% | |
| AAGGAATTACTCCTATCAAT+GGG | - | chr3_1:88815115-88815134 | None:intergenic | 30.0% | |
| AAAGGAATTACTCCTATCAA+TGG | - | chr3_1:88815116-88815135 | None:intergenic | 30.0% | |
| CAATCATTAGATAACTTCTG+AGG | - | chr3_1:88815243-88815262 | None:intergenic | 30.0% | |
| ATATACCTCCTCTAAATATC+TGG | - | chr3_1:88815376-88815395 | None:intergenic | 30.0% | |
| ACGAATTGCTTGATGTATAT+AGG | - | chr3_1:88815623-88815642 | None:intergenic | 30.0% | |
| CAATAAAAAGAGAAGGAATG+TGG | - | chr3_1:88815800-88815819 | None:intergenic | 30.0% | |
| !! | GAAAGCTTTATTTGGAATCA+TGG | + | chr3_1:88816083-88816102 | Msa0385320:intron | 30.0% |
| TAATCACATTATTAGAGCCA+TGG | - | chr3_1:88816163-88816182 | None:intergenic | 30.0% | |
| !! | ATGGCTCTAATAATGTGATT+AGG | + | chr3_1:88816162-88816181 | Msa0385320:intron | 30.0% |
| !!! | ATCATTTTTTCTGGATGGAT+TGG | + | chr3_1:88816204-88816223 | Msa0385320:intron | 30.0% |
| !! | GCTTACTAAGTAAAAGCATT+TGG | + | chr3_1:88816226-88816245 | Msa0385320:intron | 30.0% |
| GAAAACTGTGAGATCATTAA+GGG | + | chr3_1:88816248-88816267 | Msa0385320:intron | 30.0% | |
| ! | GTTATGAAATTGTGGGTTAA+TGG | + | chr3_1:88816420-88816439 | Msa0385320:intron | 30.0% |
| ACTAGAAATTGCAAGACAAA+TGG | - | chr3_1:88816774-88816793 | None:intergenic | 30.0% | |
| AAATGAATAAGACTCTTCAG+TGG | + | chr3_1:88816924-88816943 | Msa0385320:CDS | 30.0% | |
| ! | TATTTAAAACCTGACAGGTA+TGG | - | chr3_1:88817011-88817030 | None:intergenic | 30.0% |
| TACTTGTCGATATTGTTAAC+AGG | + | chr3_1:88817110-88817129 | Msa0385320:intron | 30.0% | |
| ACTTGTCGATATTGTTAACA+GGG | + | chr3_1:88817111-88817130 | Msa0385320:intron | 30.0% | |
| AACATCTATCTTCTGCTTAT+CGG | - | chr3_1:88817379-88817398 | None:intergenic | 30.0% | |
| ATCTTACAGAGCTAATCAAA+TGG | - | chr3_1:88817431-88817450 | None:intergenic | 30.0% | |
| AGATAGGATATTATTAGAGG+AGG | + | chr3_1:88817596-88817615 | Msa0385320:CDS | 30.0% | |
| TATTAGAGGAGGTAATTTCA+AGG | + | chr3_1:88817607-88817626 | Msa0385320:CDS | 30.0% | |
| TATCCAAAACGTTATAGTTG+TGG | - | chr3_1:88817770-88817789 | None:intergenic | 30.0% | |
| !! | AACGTTTTGGATATTATGGA+TGG | + | chr3_1:88817777-88817796 | Msa0385320:CDS | 30.0% |
| !! | TTCCTTCTTTTGAAGATTCT+TGG | + | chr3_1:88817847-88817866 | Msa0385320:three_prime_UTR | 30.0% |
| TACCAAGAATCTTCAAAAGA+AGG | - | chr3_1:88817852-88817871 | None:intergenic | 30.0% | |
| ! | GGAGAATTATGAAATGGGTT+GGG | - | chr3_1:88812236-88812255 | None:intergenic | 35.0% |
| AGGAGAATTATGAAATGGGT+TGG | - | chr3_1:88812237-88812256 | None:intergenic | 35.0% | |
| AAAAATGGGAGCTGTTTGTT+CGG | + | chr3_1:88812331-88812350 | Msa0385320:exon | 35.0% | |
| ! | AATGGCTTTTCCGATGAATT+CGG | + | chr3_1:88812506-88812525 | Msa0385320:CDS | 35.0% |
| ATTTCCTTCGGTAGCAATTT+CGG | - | chr3_1:88812915-88812934 | None:intergenic | 35.0% | |
| ! | GTCTCAAGTTTGATTTCCTT+CGG | - | chr3_1:88812927-88812946 | None:intergenic | 35.0% |
| TCAAACTTGAGACCTTTGAA+AGG | + | chr3_1:88812934-88812953 | Msa0385320:intron | 35.0% | |
| GAAGATTTATGCACCATTTC+CGG | - | chr3_1:88813042-88813061 | None:intergenic | 35.0% | |
| GGAATTTGAACTTTGTCTCT+TGG | - | chr3_1:88813110-88813129 | None:intergenic | 35.0% | |
| ACAAAGTTCAAATTCCCTCA+GGG | + | chr3_1:88813114-88813133 | Msa0385320:intron | 35.0% | |
| GGGGGAAACTATTAGTAATT+AGG | - | chr3_1:88813506-88813525 | None:intergenic | 35.0% | |
| TTGAGATTCTAGTATGGCAT+TGG | + | chr3_1:88813680-88813699 | Msa0385320:intron | 35.0% | |
| AAATGAAGAAATTCCACCAC+AGG | - | chr3_1:88813716-88813735 | None:intergenic | 35.0% | |
| ! | TTGGTGTCTCTTCTTATCAT+AGG | + | chr3_1:88813755-88813774 | Msa0385320:intron | 35.0% |
| CTTATCATAGGTCACTAGAA+AGG | + | chr3_1:88813767-88813786 | Msa0385320:intron | 35.0% | |
| ACTAGAAAGGGCTCTTTATT+GGG | + | chr3_1:88813780-88813799 | Msa0385320:CDS | 35.0% | |
| TATTGGGTAAAGCTAGCTAT+AGG | + | chr3_1:88813796-88813815 | Msa0385320:CDS | 35.0% | |
| ATTGGGTAAAGCTAGCTATA+GGG | + | chr3_1:88813797-88813816 | Msa0385320:CDS | 35.0% | |
| GTGAAATAAAATGGCTCCTT+TGG | - | chr3_1:88813952-88813971 | None:intergenic | 35.0% | |
| AAACATTCAGTTCCTCAAGA+AGG | + | chr3_1:88813986-88814005 | Msa0385320:CDS | 35.0% | |
| ATATGTGTAAAGACCCACAA+TGG | + | chr3_1:88814224-88814243 | Msa0385320:CDS | 35.0% | |
| AGATTAGACTTGGATGTCTT+GGG | + | chr3_1:88814404-88814423 | Msa0385320:intron | 35.0% | |
| ! | TAGTCTAGTTCATCATACTG+CGG | + | chr3_1:88814475-88814494 | Msa0385320:CDS | 35.0% |
| TTATCTCATTGGTGAACTGA+TGG | + | chr3_1:88814538-88814557 | Msa0385320:intron | 35.0% | |
| ! | CAGTTTTCATTTGTATCACC+AGG | + | chr3_1:88814647-88814666 | Msa0385320:intron | 35.0% |
| ! | TCTAAGTTCTAACCTTTCAG+AGG | - | chr3_1:88814898-88814917 | None:intergenic | 35.0% |
| TTTGACAAAAAGGGGAAGAT+TGG | - | chr3_1:88814940-88814959 | None:intergenic | 35.0% | |
| ! | TTCCCCTTTTTGTCAAATCT+TGG | + | chr3_1:88814943-88814962 | Msa0385320:intron | 35.0% |
| AACATCTGTTACCCATTGAT+AGG | + | chr3_1:88815101-88815120 | Msa0385320:intron | 35.0% | |
| AAAATATTTCTCAGGTCACC+AGG | - | chr3_1:88815161-88815180 | None:intergenic | 35.0% | |
| TCTTTGGTCCAGATATTTAG+AGG | + | chr3_1:88815365-88815384 | Msa0385320:CDS | 35.0% | |
| TCCAAAACTTCATTCAGGTA+GGG | - | chr3_1:88815461-88815480 | None:intergenic | 35.0% | |
| ATCCAAAACTTCATTCAGGT+AGG | - | chr3_1:88815462-88815481 | None:intergenic | 35.0% | |
| TGTTCATACCATGATTTCCA+AGG | - | chr3_1:88815651-88815670 | None:intergenic | 35.0% | |
| TCATCACATCTAGTATGCTT+AGG | + | chr3_1:88815747-88815766 | Msa0385320:intron | 35.0% | |
| TCATGACATATAGATAGGCA+GGG | - | chr3_1:88815836-88815855 | None:intergenic | 35.0% | |
| ATCATGACATATAGATAGGC+AGG | - | chr3_1:88815837-88815856 | None:intergenic | 35.0% | |
| !! | AATAGCTGCCTTCATTTTTG+TGG | + | chr3_1:88815968-88815987 | Msa0385320:intron | 35.0% |
| TAGCTCAACCACAAAAATGA+AGG | - | chr3_1:88815979-88815998 | None:intergenic | 35.0% | |
| !! | TTTCTGGCGAAAGCTTTATT+TGG | + | chr3_1:88816075-88816094 | Msa0385320:intron | 35.0% |
| GGAAAACTGTGAGATCATTA+AGG | + | chr3_1:88816247-88816266 | Msa0385320:intron | 35.0% | |
| !! | CAGCAATTTCTGTTTCTATC+AGG | + | chr3_1:88816607-88816626 | Msa0385320:intron | 35.0% |
| TATAATGTGTCCCTCGTATT+TGG | - | chr3_1:88816656-88816675 | None:intergenic | 35.0% | |
| ATCCATTTCTATCCAGAAAG+AGG | + | chr3_1:88816724-88816743 | Msa0385320:CDS | 35.0% | |
| TACCTCTTTCTGGATAGAAA+TGG | - | chr3_1:88816729-88816748 | None:intergenic | 35.0% | |
| AATTTCAATCTTCAAGAGGC+AGG | - | chr3_1:88816834-88816853 | None:intergenic | 35.0% | |
| TTGATTGTATTTGCCGCAAA+TGG | - | chr3_1:88816956-88816975 | None:intergenic | 35.0% | |
| TATTTCCAGCTACGAAAACA+AGG | - | chr3_1:88817057-88817076 | None:intergenic | 35.0% | |
| TCAGTTATCATGGATTCTCA+TGG | - | chr3_1:88817269-88817288 | None:intergenic | 35.0% | |
| AACAGGAACATCAGTTATCA+TGG | - | chr3_1:88817279-88817298 | None:intergenic | 35.0% | |
| ATTAGCAAAAGTGAGGAACT+TGG | + | chr3_1:88817645-88817664 | Msa0385320:CDS | 35.0% | |
| TTGGATATTATGGATGGCTT+AGG | + | chr3_1:88817783-88817802 | Msa0385320:CDS | 35.0% | |
| ACTTGGAGGGATGAACAATT+TGG | + | chr3_1:88812382-88812401 | Msa0385320:CDS | 40.0% | |
| CTTGGAGGGATGAACAATTT+GGG | + | chr3_1:88812383-88812402 | Msa0385320:CDS | 40.0% | |
| TTGGAGGGATGAACAATTTG+GGG | + | chr3_1:88812384-88812403 | Msa0385320:CDS | 40.0% | |
| ! | ATGAACAATTTGGGGTTCTC+TGG | + | chr3_1:88812392-88812411 | Msa0385320:CDS | 40.0% |
| ! | TGAACAATTTGGGGTTCTCT+GGG | + | chr3_1:88812393-88812412 | Msa0385320:CDS | 40.0% |
| AGTGGATAGACCGAATTCAT+CGG | - | chr3_1:88812519-88812538 | None:intergenic | 40.0% | |
| TATCCACTTCCGCTTCAATT+GGG | + | chr3_1:88812531-88812550 | Msa0385320:CDS | 40.0% | |
| !! | CTGTTTTTCCCCAATTGAAG+CGG | - | chr3_1:88812543-88812562 | None:intergenic | 40.0% |
| AAGACTTAAGGACATGGCTA+TGG | + | chr3_1:88812676-88812695 | Msa0385320:intron | 40.0% | |
| TCAGCTTGGTTTCTTGAACA+TGG | - | chr3_1:88812778-88812797 | None:intergenic | 40.0% | |
| AGCTAGATCAAAGCTCTTGA+TGG | + | chr3_1:88812880-88812899 | Msa0385320:intron | 40.0% | |
| TTTGAGTGAGCTCCTTTCAA+AGG | - | chr3_1:88812949-88812968 | None:intergenic | 40.0% | |
| TTTGAAAGGAGCTCACTCAA+AGG | + | chr3_1:88812948-88812967 | Msa0385320:intron | 40.0% | |
| CTTACTTAACCCATTTGGGT+TGG | - | chr3_1:88812995-88813014 | None:intergenic | 40.0% | |
| TTACAAGGTCAAGCTCTTAG+AGG | - | chr3_1:88813085-88813104 | None:intergenic | 40.0% | |
| GACAAAGTTCAAATTCCCTC+AGG | + | chr3_1:88813113-88813132 | Msa0385320:intron | 40.0% | |
| ! | GTAGCACCAGTGTTGTTAAA+CGG | - | chr3_1:88813484-88813503 | None:intergenic | 40.0% |
| GGGCTCACTTATTCATATCA+TGG | - | chr3_1:88813557-88813576 | None:intergenic | 40.0% | |
| !! | AACTAGAGGCATTTGTATGG+GGG | - | chr3_1:88813578-88813597 | None:intergenic | 40.0% |
| !! | CAACTAGAGGCATTTGTATG+GGG | - | chr3_1:88813579-88813598 | None:intergenic | 40.0% |
| !! | GCAACTAGAGGCATTTGTAT+GGG | - | chr3_1:88813580-88813599 | None:intergenic | 40.0% |
| !! | AGCAACTAGAGGCATTTGTA+TGG | - | chr3_1:88813581-88813600 | None:intergenic | 40.0% |
| ATACAAATGCCTCTAGTTGC+TGG | + | chr3_1:88813580-88813599 | Msa0385320:intron | 40.0% | |
| !! | AGTATGGCATTGGCATGTTA+TGG | + | chr3_1:88813690-88813709 | Msa0385320:intron | 40.0% |
| CACTAGAAAGGGCTCTTTAT+TGG | + | chr3_1:88813779-88813798 | Msa0385320:CDS | 40.0% | |
| GTGGAAGTTCTTGATACACT+TGG | + | chr3_1:88813822-88813841 | Msa0385320:CDS | 40.0% | |
| GTTCTTGATACACTTGGAAG+TGG | + | chr3_1:88813828-88813847 | Msa0385320:CDS | 40.0% | |
| ATGCCAAAGTTAAACACCAG+TGG | + | chr3_1:88813852-88813871 | Msa0385320:CDS | 40.0% | |
| CAAAGTTAAACACCAGTGGT+GGG | + | chr3_1:88813856-88813875 | Msa0385320:CDS | 40.0% | |
| ! | GTTTTGCTGAGATGGACAAA+AGG | + | chr3_1:88814069-88814088 | Msa0385320:CDS | 40.0% |
| TCACGGGAAGTAGTTAGATT+TGG | + | chr3_1:88814199-88814218 | Msa0385320:CDS | 40.0% | |
| ACCTACATCGACATTTCTCA+AGG | + | chr3_1:88814251-88814270 | Msa0385320:CDS | 40.0% | |
| ACCTTGAGAAATGTCGATGT+AGG | - | chr3_1:88814255-88814274 | None:intergenic | 40.0% | |
| CAGATTAGACTTGGATGTCT+TGG | + | chr3_1:88814403-88814422 | Msa0385320:intron | 40.0% | |
| ! | GAACTCCTGCATTGTCTTTT+CGG | - | chr3_1:88814453-88814472 | None:intergenic | 40.0% |
| TCATACTGCGGTAAGCTTAT+TGG | + | chr3_1:88814487-88814506 | Msa0385320:intron | 40.0% | |
| CATTTATGTTTCCCTGCTTC+TGG | + | chr3_1:88814692-88814711 | Msa0385320:intron | 40.0% | |
| TCCTTGAATCTTCCTCTGAA+AGG | + | chr3_1:88814883-88814902 | Msa0385320:CDS | 40.0% | |
| ACCTTTCAGAGGAAGATTCA+AGG | - | chr3_1:88814887-88814906 | None:intergenic | 40.0% | |
| TACACGCTCTGTATAAATGC+AGG | + | chr3_1:88815270-88815289 | Msa0385320:intron | 40.0% | |
| TTGGTCCAGATATTTAGAGG+AGG | + | chr3_1:88815368-88815387 | Msa0385320:CDS | 40.0% | |
| CCAAAACTTCATTCAGGTAG+GGG | - | chr3_1:88815460-88815479 | None:intergenic | 40.0% | |
| GTTGTTACAGTCTTCTTCCA+TGG | + | chr3_1:88816143-88816162 | Msa0385320:intron | 40.0% | |
| ATCTATTGCGTAGAACTCGT+TGG | + | chr3_1:88816352-88816371 | Msa0385320:intron | 40.0% | |
| ! | TGAAATTGTGGGTTAATGGC+AGG | + | chr3_1:88816424-88816443 | Msa0385320:intron | 40.0% |
| ! | GGTGCTGTCAAGTATACTAA+AGG | + | chr3_1:88816451-88816470 | Msa0385320:CDS | 40.0% |
| ACTAAAGGTCCTCAAAGACT+AGG | + | chr3_1:88816466-88816485 | Msa0385320:CDS | 40.0% | |
| ACGAGGGACACATTATATCA+AGG | + | chr3_1:88816659-88816678 | Msa0385320:CDS | 40.0% | |
| ! | AGGGCACTCTTAATACTGTT+TGG | - | chr3_1:88816689-88816708 | None:intergenic | 40.0% |
| CAAATGGATGTCCAGGAAAA+GGG | - | chr3_1:88816758-88816777 | None:intergenic | 40.0% | |
| ACAAATGGATGTCCAGGAAA+AGG | - | chr3_1:88816759-88816778 | None:intergenic | 40.0% | |
| CTCCTTCACTCATATCAAAG+CGG | + | chr3_1:88816901-88816920 | Msa0385320:CDS | 40.0% | |
| TTCCGCTTTGATATGAGTGA+AGG | - | chr3_1:88816906-88816925 | None:intergenic | 40.0% | |
| ! | GATTTTTGTCCATACCTGTC+AGG | + | chr3_1:88816999-88817018 | Msa0385320:intron | 40.0% |
| !!! | TTTTTTTTTTCTCCCCGTGC+TGG | + | chr3_1:88817031-88817050 | Msa0385320:intron | 40.0% |
| ATTGTTAACAGGGCTCATCA+AGG | + | chr3_1:88817121-88817140 | Msa0385320:intron | 40.0% | |
| AAATAACAAGTGGAGTCAGC+AGG | + | chr3_1:88817241-88817260 | Msa0385320:intron | 40.0% | |
| CGTTACTGCAATGTCAAAAC+AGG | - | chr3_1:88817296-88817315 | None:intergenic | 40.0% | |
| TGACATTGCAGTAACGACTT+TGG | + | chr3_1:88817300-88817319 | Msa0385320:intron | 40.0% | |
| ! | CTGAACTTCAGTCTAAGATG+CGG | + | chr3_1:88817511-88817530 | Msa0385320:CDS | 40.0% |
| AGACAGAAACAACAAGCCAT+TGG | + | chr3_1:88817554-88817573 | Msa0385320:CDS | 40.0% | |
| GACAGAAACAACAAGCCATT+GGG | + | chr3_1:88817555-88817574 | Msa0385320:CDS | 40.0% | |
| CTCAACTTTCTCCAGAAGAT+AGG | + | chr3_1:88817580-88817599 | Msa0385320:CDS | 40.0% | |
| TAGAGGAGGTAATTTCAAGG+AGG | + | chr3_1:88817610-88817629 | Msa0385320:CDS | 40.0% | |
| !! | TCCTCACTTTTGCTAATTCC+CGG | - | chr3_1:88817642-88817661 | None:intergenic | 40.0% |
| TTCACCTGATAAGGAGTTCT+TGG | + | chr3_1:88817722-88817741 | Msa0385320:CDS | 40.0% | |
| TCACCTGATAAGGAGTTCTT+GGG | + | chr3_1:88817723-88817742 | Msa0385320:CDS | 40.0% | |
| AACGTTATAGTTGTGGTGGT+TGG | - | chr3_1:88817763-88817782 | None:intergenic | 40.0% | |
| CCAAAACGTTATAGTTGTGG+TGG | - | chr3_1:88817767-88817786 | None:intergenic | 40.0% | |
| ! | CCACCACAACTATAACGTTT+TGG | + | chr3_1:88817764-88817783 | Msa0385320:CDS | 40.0% |
| GCTGAGAATTTACGACTCTG+AGG | - | chr3_1:88812198-88812217 | None:intergenic | 45.0% | |
| GAGAGCAATGCAGAAGAACT+TGG | + | chr3_1:88812365-88812384 | Msa0385320:CDS | 45.0% | |
| AGCAATGCAGAAGAACTTGG+AGG | + | chr3_1:88812368-88812387 | Msa0385320:CDS | 45.0% | |
| GCAATGCAGAAGAACTTGGA+GGG | + | chr3_1:88812369-88812388 | Msa0385320:CDS | 45.0% | |
| ! | CTCTGGGAAGGTTCTTAAGA+AGG | + | chr3_1:88812409-88812428 | Msa0385320:CDS | 45.0% |
| CTATCCACTTCCGCTTCAAT+TGG | + | chr3_1:88812530-88812549 | Msa0385320:CDS | 45.0% | |
| ATCCACTTCCGCTTCAATTG+GGG | + | chr3_1:88812532-88812551 | Msa0385320:CDS | 45.0% | |
| CGCTTCAATTGGGGAAAAAC+AGG | + | chr3_1:88812541-88812560 | Msa0385320:CDS | 45.0% | |
| TTTAAATGACGCCCCACAAG+TGG | - | chr3_1:88812861-88812880 | None:intergenic | 45.0% | |
| GGTCTCAAGCTAACATCAGT+AGG | + | chr3_1:88812969-88812988 | Msa0385320:intron | 45.0% | |
| ATCAGTAGGCCAACCCAAAT+GGG | + | chr3_1:88812983-88813002 | Msa0385320:intron | 45.0% | |
| CTTTGTCTCTTGGGGTTACA+AGG | - | chr3_1:88813100-88813119 | None:intergenic | 45.0% | |
| ! | GTATCACTCAGTGCTGTTGA+AGG | + | chr3_1:88813316-88813335 | Msa0385320:intron | 45.0% |
| GCCATATGAACTAGCCATTG+CGG | + | chr3_1:88813372-88813391 | Msa0385320:intron | 45.0% | |
| CCTTCACAAGTTGTCTATCG+CGG | + | chr3_1:88813421-88813440 | Msa0385320:intron | 45.0% | |
| !! | ACTAGAGGCATTTGTATGGG+GGG | - | chr3_1:88813577-88813596 | None:intergenic | 45.0% |
| ! | CCACCACTGGTGTTTAACTT+TGG | - | chr3_1:88813858-88813877 | None:intergenic | 45.0% |
| CCAAAGTTAAACACCAGTGG+TGG | + | chr3_1:88813855-88813874 | Msa0385320:CDS | 45.0% | |
| CATTCAGTTCCTCAAGAAGG+AGG | + | chr3_1:88813989-88814008 | Msa0385320:CDS | 45.0% | |
| CTGAGATGGACAAAAGGTTC+TGG | + | chr3_1:88814075-88814094 | Msa0385320:intron | 45.0% | |
| ! | GATGTAGGTTGTGCCATTGT+GGG | - | chr3_1:88814240-88814259 | None:intergenic | 45.0% |
| AGATGCCGAAAAGACAATGC+AGG | + | chr3_1:88814445-88814464 | Msa0385320:CDS | 45.0% | |
| CTCATAGCAAACCAGAAGCA+GGG | - | chr3_1:88814706-88814725 | None:intergenic | 45.0% | |
| ACTCATAGCAAACCAGAAGC+AGG | - | chr3_1:88814707-88814726 | None:intergenic | 45.0% | |
| CTGTCTTACAGTCTATCAGC+AGG | + | chr3_1:88815199-88815218 | Msa0385320:intron | 45.0% | |
| TCATTCAGGTAGGGGAACAT+GGG | - | chr3_1:88815452-88815471 | None:intergenic | 45.0% | |
| TTCATTCAGGTAGGGGAACA+TGG | - | chr3_1:88815453-88815472 | None:intergenic | 45.0% | |
| ! | CCCCTACCTGAATGAAGTTT+TGG | + | chr3_1:88815457-88815476 | Msa0385320:intron | 45.0% |
| GTGTAGCCGTGTATATCTTG+CGG | + | chr3_1:88815486-88815505 | Msa0385320:intron | 45.0% | |
| CAAGCAATTCGTGAGTTCCT+TGG | + | chr3_1:88815631-88815650 | Msa0385320:CDS | 45.0% | |
| CGTGAGTTCCTTGGAAATCA+TGG | + | chr3_1:88815640-88815659 | Msa0385320:CDS | 45.0% | |
| ATTGCGTAGAACTCGTTGGA+AGG | + | chr3_1:88816356-88816375 | Msa0385320:intron | 45.0% | |
| AATGTGTCCCTCGTATTTGG+AGG | - | chr3_1:88816653-88816672 | None:intergenic | 45.0% | |
| !! | TTAAGAGTGCCCTTCCATCT+CGG | + | chr3_1:88816696-88816715 | Msa0385320:CDS | 45.0% |
| !! | GAAATGGATTGCAACCGAGA+TGG | - | chr3_1:88816713-88816732 | None:intergenic | 45.0% |
| AGGGAGGTTATACCTCTTTC+TGG | - | chr3_1:88816739-88816758 | None:intergenic | 45.0% | |
| ! | AGGTATAACCTCCCTTTTCC+TGG | + | chr3_1:88816744-88816763 | Msa0385320:intron | 45.0% |
| TGCAAGACAAATGGATGTCC+AGG | - | chr3_1:88816765-88816784 | None:intergenic | 45.0% | |
| ATAACGCGTGAGCAATTGCA+GGG | - | chr3_1:88817085-88817104 | None:intergenic | 45.0% | |
| AATAACGCGTGAGCAATTGC+AGG | - | chr3_1:88817086-88817105 | None:intergenic | 45.0% | |
| !! | CTTTGGATGGGTTGGTGAAT+GGG | + | chr3_1:88817144-88817163 | Msa0385320:CDS | 45.0% |
| TTGGTGAATGGGCAAACACA+AGG | + | chr3_1:88817155-88817174 | Msa0385320:CDS | 45.0% | |
| ! | GCGAATTGGGTTGCTTTCTT+TGG | - | chr3_1:88817337-88817356 | None:intergenic | 45.0% |
| ! | AAAGTGTCTGGAGGCGAATT+GGG | - | chr3_1:88817350-88817369 | None:intergenic | 45.0% |
| ! | TAAAGTGTCTGGAGGCGAAT+TGG | - | chr3_1:88817351-88817370 | None:intergenic | 45.0% |
| ! | TATCGGCGTAGTAAAGTGTC+TGG | - | chr3_1:88817362-88817381 | None:intergenic | 45.0% |
| TGAAGTTCAGGTCTCTTGGA+AGG | - | chr3_1:88817501-88817520 | None:intergenic | 45.0% | |
| AGACTGAAGTTCAGGTCTCT+TGG | - | chr3_1:88817505-88817524 | None:intergenic | 45.0% | |
| CGCATCTTAGACTGAAGTTC+AGG | - | chr3_1:88817513-88817532 | None:intergenic | 45.0% | |
| GGAGAAAGTTGAGTTCCCAA+TGG | - | chr3_1:88817573-88817592 | None:intergenic | 45.0% | |
| AGGAGGTAATTTCAAGGAGG+AGG | + | chr3_1:88817613-88817632 | Msa0385320:CDS | 45.0% | |
| !! | CCTCACTTTTGCTAATTCCC+GGG | - | chr3_1:88817641-88817660 | None:intergenic | 45.0% |
| !!! | CAGCACTTTTGGTCTTGAGA+GGG | - | chr3_1:88817698-88817717 | None:intergenic | 45.0% |
| !! | CTCTCAAGACCAAAAGTGCT+GGG | + | chr3_1:88817697-88817716 | Msa0385320:CDS | 45.0% |
| GTACCCAAGAACTCCTTATC+AGG | - | chr3_1:88817729-88817748 | None:intergenic | 45.0% | |
| AATGGGAGCTGTTTGTTCGG+CGG | + | chr3_1:88812334-88812353 | Msa0385320:exon | 50.0% | |
| ! | CAATTTGGGGTTCTCTGGGA+AGG | + | chr3_1:88812397-88812416 | Msa0385320:CDS | 50.0% |
| TTCCCCAATTGAAGCGGAAG+TGG | - | chr3_1:88812537-88812556 | None:intergenic | 50.0% | |
| TCCACCGAAATTGCTACCGA+AGG | + | chr3_1:88812908-88812927 | Msa0385320:intron | 50.0% | |
| TCCTTCGGTAGCAATTTCGG+TGG | - | chr3_1:88812912-88812931 | None:intergenic | 50.0% | |
| CATCAGTAGGCCAACCCAAA+TGG | + | chr3_1:88812982-88813001 | Msa0385320:intron | 50.0% | |
| CTGGTCTAGTCGTTCTGTGT+TGG | + | chr3_1:88813177-88813196 | Msa0385320:intron | 50.0% | |
| ! | TCGTTCTGTGTTGGCCGATA+TGG | + | chr3_1:88813186-88813205 | Msa0385320:intron | 50.0% |
| CTAAAGCTCCCGCATAAGCA+GGG | - | chr3_1:88813269-88813288 | None:intergenic | 50.0% | |
| ACTAAAGCTCCCGCATAAGC+AGG | - | chr3_1:88813270-88813289 | None:intergenic | 50.0% | |
| ! | ATGCGGGAGCTTTAGTGCAA+TGG | + | chr3_1:88813274-88813293 | Msa0385320:intron | 50.0% |
| ! | GCCGCAATGGCTAGTTCATA+TGG | - | chr3_1:88813376-88813395 | None:intergenic | 50.0% |
| CCGCGATAGACAACTTGTGA+AGG | - | chr3_1:88813424-88813443 | None:intergenic | 50.0% | |
| TACCCCATGACATTCCACCA+TGG | + | chr3_1:88813455-88813474 | Msa0385320:intron | 50.0% | |
| ! | AGGCCATGGTGGAATGTCAT+GGG | - | chr3_1:88813461-88813480 | None:intergenic | 50.0% |
| TTGTTAAACGGAGGCCATGG+TGG | - | chr3_1:88813472-88813491 | None:intergenic | 50.0% | |
| ! | GTGTTGTTAAACGGAGGCCA+TGG | - | chr3_1:88813475-88813494 | None:intergenic | 50.0% |
| TGGCCTCCGTTTAACAACAC+TGG | + | chr3_1:88813475-88813494 | Msa0385320:intron | 50.0% | |
| ! | GCACCAGTGTTGTTAAACGG+AGG | - | chr3_1:88813481-88813500 | None:intergenic | 50.0% |
| AGCAGTAAGCCAGCAACTAG+AGG | - | chr3_1:88813592-88813611 | None:intergenic | 50.0% | |
| CATTGGCATGTTATGGCCTG+TGG | + | chr3_1:88813697-88813716 | Msa0385320:intron | 50.0% | |
| GGGTAAAGCTAGCTATAGGG+CGG | + | chr3_1:88813800-88813819 | Msa0385320:CDS | 50.0% | |
| TAAAGCTAGCTATAGGGCGG+TGG | + | chr3_1:88813803-88813822 | Msa0385320:CDS | 50.0% | |
| TCTCTGGCAAGCTTTCCAGA+GGG | + | chr3_1:88813883-88813902 | Msa0385320:CDS | 50.0% | |
| ! | CGATGTAGGTTGTGCCATTG+TGG | - | chr3_1:88814241-88814260 | None:intergenic | 50.0% |
| CTGCAGCCGCAAGATATACA+CGG | - | chr3_1:88815495-88815514 | None:intergenic | 50.0% | |
| AGAAGGAATGTGGGCAACAG+AGG | - | chr3_1:88815790-88815809 | None:intergenic | 50.0% | |
| ! | TGTGGGTTAATGGCAGGTAC+TGG | + | chr3_1:88816430-88816449 | Msa0385320:intron | 50.0% |
| ! | CCAGCTTCACCTAGTCTTTG+AGG | - | chr3_1:88816478-88816497 | None:intergenic | 50.0% |
| CCTCAAAGACTAGGTGAAGC+TGG | + | chr3_1:88816475-88816494 | Msa0385320:CDS | 50.0% | |
| TATTTGGAGGAAGGGAGGCT+GGG | - | chr3_1:88816640-88816659 | None:intergenic | 50.0% | |
| CTCCCTTCCTCCAAATACGA+GGG | + | chr3_1:88816643-88816662 | Msa0385320:CDS | 50.0% | |
| GTCCCTCGTATTTGGAGGAA+GGG | - | chr3_1:88816648-88816667 | None:intergenic | 50.0% | |
| TGTCCCTCGTATTTGGAGGA+AGG | - | chr3_1:88816649-88816668 | None:intergenic | 50.0% | |
| GGATTGCAACCGAGATGGAA+GGG | - | chr3_1:88816708-88816727 | None:intergenic | 50.0% | |
| TGGATTGCAACCGAGATGGA+AGG | - | chr3_1:88816709-88816728 | None:intergenic | 50.0% | |
| ATGGATGTCCAGGAAAAGGG+AGG | - | chr3_1:88816755-88816774 | None:intergenic | 50.0% | |
| TCAGTGGCTCGTACCATTTG+CGG | + | chr3_1:88816940-88816959 | Msa0385320:CDS | 50.0% | |
| TACGAAAACAAGGCCAGCAC+GGG | - | chr3_1:88817047-88817066 | None:intergenic | 50.0% | |
| CTACGAAAACAAGGCCAGCA+CGG | - | chr3_1:88817048-88817067 | None:intergenic | 50.0% | |
| AACAGGGCTCATCAAGGCTT+TGG | + | chr3_1:88817127-88817146 | Msa0385320:intron | 50.0% | |
| !! | GGCTCATCAAGGCTTTGGAT+GGG | + | chr3_1:88817132-88817151 | Msa0385320:CDS | 50.0% |
| !! | CATCAAGGCTTTGGATGGGT+TGG | + | chr3_1:88817136-88817155 | Msa0385320:CDS | 50.0% |
| !! | GCTTTGGATGGGTTGGTGAA+TGG | + | chr3_1:88817143-88817162 | Msa0385320:CDS | 50.0% |
| GATCCAGACAAAATGCCTCG+AGG | + | chr3_1:88817448-88817467 | Msa0385320:CDS | 50.0% | |
| ACAAAATGCCTCGAGGCCAA+TGG | + | chr3_1:88817455-88817474 | Msa0385320:CDS | 50.0% | |
| AGTTCAGGTCTCTTGGAAGG+AGG | - | chr3_1:88817498-88817517 | None:intergenic | 50.0% | |
| AATTTCAAGGAGGAGGAGCC+CGG | + | chr3_1:88817620-88817639 | Msa0385320:CDS | 50.0% | |
| CCCGGGAATTAGCAAAAGTG+AGG | + | chr3_1:88817638-88817657 | Msa0385320:CDS | 50.0% | |
| CTGCCAAGAAAACTCATGCC+AGG | + | chr3_1:88817670-88817689 | Msa0385320:CDS | 50.0% | |
| ! | GTGCCTGGCATGAGTTTTCT+TGG | - | chr3_1:88817676-88817695 | None:intergenic | 50.0% |
| !!! | CCAGCACTTTTGGTCTTGAG+AGG | - | chr3_1:88817699-88817718 | None:intergenic | 50.0% |
| ! | CCTCTCAAGACCAAAAGTGC+TGG | + | chr3_1:88817696-88817715 | Msa0385320:CDS | 50.0% |
| ! | AGGTGAACTCCCAGCACTTT+TGG | - | chr3_1:88817709-88817728 | None:intergenic | 50.0% |
| TGCTGGGAGTTCACCTGATA+AGG | + | chr3_1:88817713-88817732 | Msa0385320:CDS | 50.0% | |
| ATGGGAGCTGTTTGTTCGGC+GGG | + | chr3_1:88812335-88812354 | Msa0385320:CDS | 55.0% | |
| !! | GACGGTGGGATCGGATTAGT+CGG | - | chr3_1:88812839-88812858 | None:intergenic | 55.0% |
| AATGACGCCCCACAAGTGGA+CGG | - | chr3_1:88812857-88812876 | None:intergenic | 55.0% | |
| ! | GGCCATGGTGGAATGTCATG+GGG | - | chr3_1:88813460-88813479 | None:intergenic | 55.0% |
| ! | GAGGCCATGGTGGAATGTCA+TGG | - | chr3_1:88813462-88813481 | None:intergenic | 55.0% |
| TGGCATGTTATGGCCTGTGG+TGG | + | chr3_1:88813700-88813719 | Msa0385320:intron | 55.0% | |
| !! | ACCAGTGGTGGGTTTGTCTC+TGG | + | chr3_1:88813867-88813886 | Msa0385320:CDS | 55.0% |
| GTCTCTGGCAAGCTTTCCAG+AGG | + | chr3_1:88813882-88813901 | Msa0385320:CDS | 55.0% | |
| CAGGTAGGGGAACATGGGAA+GGG | - | chr3_1:88815447-88815466 | None:intergenic | 55.0% | |
| TCAGGTAGGGGAACATGGGA+AGG | - | chr3_1:88815448-88815467 | None:intergenic | 55.0% | |
| GGAATGTGGGCAACAGAGGT+AGG | - | chr3_1:88815786-88815805 | None:intergenic | 55.0% | |
| GTATTTGGAGGAAGGGAGGC+TGG | - | chr3_1:88816641-88816660 | None:intergenic | 55.0% | |
| CCTCGTATTTGGAGGAAGGG+AGG | - | chr3_1:88816645-88816664 | None:intergenic | 55.0% | |
| CCTCCCTTCCTCCAAATACG+AGG | + | chr3_1:88816642-88816661 | Msa0385320:CDS | 55.0% | |
| ACGAAAACAAGGCCAGCACG+GGG | - | chr3_1:88817046-88817065 | None:intergenic | 55.0% | |
| !!! | GCTGGCCTTGTTTTCGTAGC+TGG | + | chr3_1:88817049-88817068 | Msa0385320:intron | 55.0% |
| !! | GGGCTCATCAAGGCTTTGGA+TGG | + | chr3_1:88817131-88817150 | Msa0385320:intron | 55.0% |
| ! | CGGCGTAGTAAAGTGTCTGG+AGG | - | chr3_1:88817359-88817378 | None:intergenic | 55.0% |
| !! | TGGCCTCGAGGCATTTTGTC+TGG | - | chr3_1:88817454-88817473 | None:intergenic | 55.0% |
| TTGGAAGGAGGAGACCGTGT+GGG | - | chr3_1:88817486-88817505 | None:intergenic | 55.0% | |
| ATTTCAAGGAGGAGGAGCCC+GGG | + | chr3_1:88817621-88817640 | Msa0385320:CDS | 55.0% | |
| !! | TTTGGTCTTGAGAGGGTGCC+TGG | - | chr3_1:88817691-88817710 | None:intergenic | 55.0% |
| TGGGAGCTGTTTGTTCGGCG+GGG | + | chr3_1:88812336-88812355 | Msa0385320:CDS | 60.0% | |
| AGCTGTTTGTTCGGCGGGGA+TGG | + | chr3_1:88812340-88812359 | Msa0385320:CDS | 60.0% | |
| GCTGTTTGTTCGGCGGGGAT+GGG | + | chr3_1:88812341-88812360 | Msa0385320:CDS | 60.0% | |
| CTGTTTGTTCGGCGGGGATG+GGG | + | chr3_1:88812342-88812361 | Msa0385320:CDS | 60.0% | |
| TGTTTGTTCGGCGGGGATGG+GGG | + | chr3_1:88812343-88812362 | Msa0385320:CDS | 60.0% | |
| CCACAAGTGGACGGTGGGAT+CGG | - | chr3_1:88812848-88812867 | None:intergenic | 60.0% | |
| CGATCCCACCGTCCACTTGT+GGG | + | chr3_1:88812846-88812865 | Msa0385320:intron | 60.0% | |
| GATCCCACCGTCCACTTGTG+GGG | + | chr3_1:88812847-88812866 | Msa0385320:intron | 60.0% | |
| ACTTTGCTGGGACCCCTTCC+CGG | + | chr3_1:88813242-88813261 | Msa0385320:intron | 60.0% | |
| CATAAGCAGGGTCCGGGAAG+GGG | - | chr3_1:88813257-88813276 | None:intergenic | 60.0% | |
| GCATAAGCAGGGTCCGGGAA+GGG | - | chr3_1:88813258-88813277 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGCTTATG+CGG | + | chr3_1:88813257-88813276 | Msa0385320:intron | 60.0% | |
| TTCCCGGACCCTGCTTATGC+GGG | + | chr3_1:88813258-88813277 | Msa0385320:intron | 60.0% | |
| GAACTAGCCATTGCGGCCCA+TGG | + | chr3_1:88813379-88813398 | Msa0385320:intron | 60.0% | |
| TGAAGGAACGCCCGCCATTG+TGG | - | chr3_1:88813407-88813426 | None:intergenic | 60.0% | |
| GCCAGAGACAAACCCACCAC+TGG | - | chr3_1:88813871-88813890 | None:intergenic | 60.0% | |
| GGCCAATGGCAATGCCCACA+CGG | + | chr3_1:88817469-88817488 | Msa0385320:CDS | 60.0% | |
| ! | GACCGTGTGGGCATTGCCAT+TGG | - | chr3_1:88817474-88817493 | None:intergenic | 60.0% |
| CTTGGAAGGAGGAGACCGTG+TGG | - | chr3_1:88817487-88817506 | None:intergenic | 60.0% | |
| GTGGTGGTTGGCGATGAGTG+TGG | - | chr3_1:88817751-88817770 | None:intergenic | 60.0% | |
| CCGATCCCACCGTCCACTTG+TGG | + | chr3_1:88812845-88812864 | Msa0385320:intron | 65.0% | |
| ACGCCCCACAAGTGGACGGT+GGG | - | chr3_1:88812853-88812872 | None:intergenic | 65.0% | |
| GGGAAGGGGTCCCAGCAAAG+TGG | - | chr3_1:88813243-88813262 | None:intergenic | 65.0% | |
| CGCATAAGCAGGGTCCGGGA+AGG | - | chr3_1:88813259-88813278 | None:intergenic | 65.0% | |
| CTCCCGCATAAGCAGGGTCC+GGG | - | chr3_1:88813263-88813282 | None:intergenic | 65.0% | |
| GCTCCCGCATAAGCAGGGTC+CGG | - | chr3_1:88813264-88813283 | None:intergenic | 65.0% | |
| !! | TGTGGTGCCATGGGCCGCAA+TGG | - | chr3_1:88813389-88813408 | None:intergenic | 65.0% |
| TGCGGCCCATGGCACCACAA+TGG | + | chr3_1:88813390-88813409 | Msa0385320:intron | 65.0% | |
| GGCCCATGGCACCACAATGG+CGG | + | chr3_1:88813393-88813412 | Msa0385320:intron | 65.0% | |
| GCCCATGGCACCACAATGGC+GGG | + | chr3_1:88813394-88813413 | Msa0385320:intron | 65.0% | |
| !! | GCCCGCCATTGTGGTGCCAT+GGG | - | chr3_1:88813398-88813417 | None:intergenic | 65.0% |
| ! | GGGCATTGCCATTGGCCTCG+AGG | - | chr3_1:88817466-88817485 | None:intergenic | 65.0% |
| GACGCCCCACAAGTGGACGG+TGG | - | chr3_1:88812854-88812873 | None:intergenic | 70.0% | |
| ! | CGCCCGCCATTGTGGTGCCA+TGG | - | chr3_1:88813399-88813418 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 88812185 | 88817983 | 88812185 | ID=Msa0385320;Name=Msa0385320 |
| chr3_1 | mRNA | 88812185 | 88817983 | 88812185 | ID=Msa0385320-mRNA-1;Parent=Msa0385320;Name=Msa0385320-mRNA-1;_AED=0.13;_eAED=0.13;_QI=150|1|1|1|1|1|12|171|608 |
| chr3_1 | exon | 88812185 | 88812562 | 88812185 | ID=Msa0385320-mRNA-1:exon:24043;Parent=Msa0385320-mRNA-1 |
| chr3_1 | exon | 88813777 | 88814090 | 88813777 | ID=Msa0385320-mRNA-1:exon:24044;Parent=Msa0385320-mRNA-1 |
| chr3_1 | exon | 88814180 | 88814272 | 88814180 | ID=Msa0385320-mRNA-1:exon:24045;Parent=Msa0385320-mRNA-1 |
| chr3_1 | exon | 88814406 | 88814496 | 88814406 | ID=Msa0385320-mRNA-1:exon:24046;Parent=Msa0385320-mRNA-1 |
| chr3_1 | exon | 88814811 | 88814904 | 88814811 | ID=Msa0385320-mRNA-1:exon:24047;Parent=Msa0385320-mRNA-1 |
| chr3_1 | exon | 88815292 | 88815389 | 88815292 | ID=Msa0385320-mRNA-1:exon:24048;Parent=Msa0385320-mRNA-1 |
| chr3_1 | exon | 88815592 | 88815661 | 88815592 | ID=Msa0385320-mRNA-1:exon:24049;Parent=Msa0385320-mRNA-1 |
| chr3_1 | exon | 88816446 | 88816543 | 88816446 | ID=Msa0385320-mRNA-1:exon:24050;Parent=Msa0385320-mRNA-1 |
| chr3_1 | exon | 88816629 | 88816745 | 88816629 | ID=Msa0385320-mRNA-1:exon:24051;Parent=Msa0385320-mRNA-1 |
| chr3_1 | exon | 88816899 | 88816975 | 88816899 | ID=Msa0385320-mRNA-1:exon:24052;Parent=Msa0385320-mRNA-1 |
| chr3_1 | exon | 88817132 | 88817176 | 88817132 | ID=Msa0385320-mRNA-1:exon:24053;Parent=Msa0385320-mRNA-1 |
| chr3_1 | exon | 88817311 | 88817983 | 88817311 | ID=Msa0385320-mRNA-1:exon:24054;Parent=Msa0385320-mRNA-1 |
| chr3_1 | five_prime_UTR | 88812185 | 88812334 | 88812185 | ID=Msa0385320-mRNA-1:five_prime_utr;Parent=Msa0385320-mRNA-1 |
| chr3_1 | CDS | 88812335 | 88812562 | 88812335 | ID=Msa0385320-mRNA-1:cds;Parent=Msa0385320-mRNA-1 |
| chr3_1 | CDS | 88813777 | 88814090 | 88813777 | ID=Msa0385320-mRNA-1:cds;Parent=Msa0385320-mRNA-1 |
| chr3_1 | CDS | 88814180 | 88814272 | 88814180 | ID=Msa0385320-mRNA-1:cds;Parent=Msa0385320-mRNA-1 |
| chr3_1 | CDS | 88814406 | 88814496 | 88814406 | ID=Msa0385320-mRNA-1:cds;Parent=Msa0385320-mRNA-1 |
| chr3_1 | CDS | 88814811 | 88814904 | 88814811 | ID=Msa0385320-mRNA-1:cds;Parent=Msa0385320-mRNA-1 |
| chr3_1 | CDS | 88815292 | 88815389 | 88815292 | ID=Msa0385320-mRNA-1:cds;Parent=Msa0385320-mRNA-1 |
| chr3_1 | CDS | 88815592 | 88815661 | 88815592 | ID=Msa0385320-mRNA-1:cds;Parent=Msa0385320-mRNA-1 |
| chr3_1 | CDS | 88816446 | 88816543 | 88816446 | ID=Msa0385320-mRNA-1:cds;Parent=Msa0385320-mRNA-1 |
| chr3_1 | CDS | 88816629 | 88816745 | 88816629 | ID=Msa0385320-mRNA-1:cds;Parent=Msa0385320-mRNA-1 |
| chr3_1 | CDS | 88816899 | 88816975 | 88816899 | ID=Msa0385320-mRNA-1:cds;Parent=Msa0385320-mRNA-1 |
| chr3_1 | CDS | 88817132 | 88817176 | 88817132 | ID=Msa0385320-mRNA-1:cds;Parent=Msa0385320-mRNA-1 |
| chr3_1 | CDS | 88817311 | 88817812 | 88817311 | ID=Msa0385320-mRNA-1:cds;Parent=Msa0385320-mRNA-1 |
| chr3_1 | three_prime_UTR | 88817813 | 88817983 | 88817813 | ID=Msa0385320-mRNA-1:three_prime_utr;Parent=Msa0385320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
