AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1126940

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1126940 MtrunA17_Chr7g0269231 98.462 260 1 1 1 257 1 260 0.0 525
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1126940 AT1G02880.3 68.750 256 78 1 1 256 4 257 1.35e-133 378
Msa1126940 AT1G02880.2 68.750 256 78 1 1 256 1 254 1.52e-133 377
Msa1126940 AT2G44750.2 67.969 256 79 1 1 256 5 257 1.37e-132 375
Msa1126940 AT1G02880.6 67.176 262 78 2 1 256 4 263 6.01e-131 371
Msa1126940 AT2G44750.1 67.578 256 78 2 1 256 5 255 2.37e-130 369
Msa1126940 AT1G02880.5 73.889 180 47 0 77 256 8 187 7.08e-96 280
Msa1126940 AT1G02880.1 73.889 180 47 0 77 256 8 187 7.08e-96 280
Msa1126940 AT1G02880.4 72.941 170 46 0 87 256 1 170 3.31e-88 259

Find 87 sgRNAs with CRISPR-Local

Find 315 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATTTACTGTACAAATTA+TGG 0.096100 7_3:-78472458 Msa1126940:three_prime_UTR
ACCTCTGATTTATCAGTATT+TGG 0.123339 7_3:+78473718 None:intergenic
CTTCCATTATTATTGGTTAT+TGG 0.154032 7_3:+78472392 None:intergenic
TCCTGAACTTCCATTATTAT+TGG 0.161699 7_3:+78472385 None:intergenic
CCAAAGCAAAGGAGCGAATT+TGG 0.179692 7_3:+78476340 None:intergenic
ATGGGTCTTATTCCATTTAA+AGG 0.209884 7_3:-78472546 Msa1126940:three_prime_UTR
TTCCATTATTATTGGTTATT+GGG 0.226514 7_3:+78472393 None:intergenic
TTCCATGTCCATTAATTAGA+TGG 0.243974 7_3:-78472565 Msa1126940:three_prime_UTR
AAGGGAGTTATTCATTGATT+TGG 0.251535 7_3:-78472427 Msa1126940:three_prime_UTR
TACGAACATGAGAAGGATTT+TGG 0.259220 7_3:+78476143 None:intergenic
CCAAATTCGCTCCTTTGCTT+TGG 0.262944 7_3:-78476340 Msa1126940:CDS
CAAATTCGCTCCTTTGCTTT+GGG 0.270102 7_3:-78476339 Msa1126940:CDS
AAAAGGTTGTAGTGAGGTTT+TGG 0.270539 7_3:-78476505 Msa1126940:five_prime_UTR
AGTCTGATTCAGATCTTCTT+TGG 0.283649 7_3:-78472650 Msa1126940:CDS
AGCACATCAAATATTGTAAA+AGG 0.285187 7_3:-78472690 Msa1126940:CDS
AAGAAAGTCTGGCCTTTAAA+TGG 0.287584 7_3:+78472534 None:intergenic
AATAAGACCCATCTAATTAA+TGG 0.291612 7_3:+78472557 None:intergenic
ACCAATAATAATGGAAGTTC+AGG 0.301165 7_3:-78472386 Msa1126940:three_prime_UTR
ATTTATCAGTATTTGGTATA+AGG 0.310511 7_3:+78473725 None:intergenic
ATTAATGGACATGGAAGATA+TGG 0.317023 7_3:+78472572 None:intergenic
TCATTTACTGTACAAATTAT+GGG 0.320724 7_3:-78472457 Msa1126940:three_prime_UTR
CATTGTGGACTCGTTCCTAT+TGG 0.325599 7_3:-78473209 Msa1126940:CDS
AGGGAGTTATTCATTGATTT+GGG 0.339085 7_3:-78472426 Msa1126940:three_prime_UTR
TTCCCAATAACCAATAATAA+TGG 0.344674 7_3:-78472395 Msa1126940:three_prime_UTR
TCCTGTGGTTGTAGAACTTC+CGG 0.357660 7_3:+78473178 None:intergenic
CAAAGCAAAGGAGCGAATTT+GGG 0.363044 7_3:+78476341 None:intergenic
CAGCTATGCATTCTTGCTGT+TGG 0.376459 7_3:-78473392 Msa1126940:CDS
GGGAGATTTGATCACGAGAT+TGG 0.378181 7_3:-78473359 Msa1126940:CDS
GAGGACACAGAGATGAGATT+TGG 0.378288 7_3:-78472723 Msa1126940:CDS
ATGTCACCTTTGATTGCATC+AGG 0.379819 7_3:+78474060 None:intergenic
ATTCTTGCTGTTGGAGCACT+TGG 0.384460 7_3:-78473383 Msa1126940:CDS
ACGGAAGAAGAAGAAGTTTC+CGG 0.385489 7_3:+78476404 None:intergenic
ATTGTGGACTCGTTCCTATT+GGG 0.388599 7_3:-78473208 Msa1126940:CDS
TATTCGGCTTATTACATGAA+TGG 0.392673 7_3:+78472313 None:intergenic
CTTCCGGATGGCATCCCAAT+AGG 0.427717 7_3:+78473194 None:intergenic
CATATACGAGTTTGCGCTGA+TGG 0.437248 7_3:-78476211 Msa1126940:CDS
GTTGGTTTCGTACCTGTGTT+TGG 0.439797 7_3:+78476662 None:intergenic
CTTGCTGTTGGAGCACTTGG+TGG 0.445518 7_3:-78473380 Msa1126940:CDS
ATCTTATGCGAGTAATTCTT+CGG 0.450082 7_3:+78473260 None:intergenic
TACATGTTGCATACTGCACC+TGG 0.452863 7_3:-78472599 Msa1126940:three_prime_UTR
ACAAATTATGGGAGGGTGAA+AGG 0.460413 7_3:-78472446 Msa1126940:three_prime_UTR
GAAGAGAAGCATCAATCGTT+AGG 0.461340 7_3:-78476471 Msa1126940:five_prime_UTR
TGAGGCAATCATCAGATAGA+AGG 0.467880 7_3:+78473294 None:intergenic
AACAAATTTACAATTAGTAG+CGG 0.472580 7_3:-78476637 Msa1126940:five_prime_UTR
CAAATTATGGGAGGGTGAAA+GGG 0.475106 7_3:-78472445 Msa1126940:three_prime_UTR
AATTTCTATCAAGAAGCTCT+AGG 0.492838 7_3:-78472625 Msa1126940:exon
AAGGTGACATGGATTCAATC+AGG 0.496191 7_3:-78474047 Msa1126940:CDS
AATTGACGAGTCTCAAGATC+AGG 0.499779 7_3:-78473788 Msa1126940:CDS
GTTCCTATTGGGATGCCATC+CGG 0.507989 7_3:-78473197 Msa1126940:CDS
TCCATGTCCATTAATTAGAT+GGG 0.518703 7_3:-78472564 Msa1126940:three_prime_UTR
TTCATTCAATCTTCTGTCGA+GGG 0.519105 7_3:-78473236 Msa1126940:CDS
GACACAGAGATGAGATTTGG+CGG 0.521420 7_3:-78472720 Msa1126940:CDS
ATCCTTCTCATGTTCGTACC+AGG 0.523054 7_3:-78476138 Msa1126940:intron
CATGGAAGATATGGAAAGCC+AGG 0.523067 7_3:+78472581 None:intergenic
CATCAATCGTTAGGATAGGA+TGG 0.529835 7_3:-78476462 Msa1126940:exon
TTGCTGTTGGAGCACTTGGT+GGG 0.532035 7_3:-78473379 Msa1126940:CDS
CTTCATTCAATCTTCTGTCG+AGG 0.535339 7_3:-78473237 Msa1126940:CDS
ACAAATTTACAATTAGTAGC+GGG 0.545015 7_3:-78476636 Msa1126940:five_prime_UTR
GCTCCTTTGCTTTGGGACCA+CGG 0.545810 7_3:-78476332 Msa1126940:intron
TCTTCGGAAGAAGTTGAATG+AGG 0.557423 7_3:+78473276 None:intergenic
TAGAAGGATAATGCGCGTGT+TGG 0.565349 7_3:+78473310 None:intergenic
GAAGCATCAATCGTTAGGAT+AGG 0.569437 7_3:-78476466 Msa1126940:five_prime_UTR
TCCGGAAGTTCTACAACCAC+AGG 0.570611 7_3:-78473179 Msa1126940:CDS
ACCCATCTAATTAATGGACA+TGG 0.570935 7_3:+78472563 None:intergenic
AATACTTACTGAGGTCCCAC+TGG 0.575667 7_3:+78473153 None:intergenic
CATTTCATCATACACACGGT+TGG 0.576112 7_3:+78476183 None:intergenic
TTTACTGTACAAATTATGGG+AGG 0.587647 7_3:-78472454 Msa1126940:three_prime_UTR
TGATGCAATCAAAGGTGACA+TGG 0.600849 7_3:-78474058 Msa1126940:CDS
ACTTGATTTCTATGCAAACC+TGG 0.601776 7_3:-78474016 Msa1126940:intron
ACCAAATACTGATAAATCAG+AGG 0.604378 7_3:-78473719 Msa1126940:intron
AAGAGCGTATGTCAGAGAAA+CGG 0.605988 7_3:+78476385 None:intergenic
ATACCGTGGTCCCAAAGCAA+AGG 0.614254 7_3:+78476329 None:intergenic
TACAAGCCTGATGCAATCAA+AGG 0.623735 7_3:-78474066 Msa1126940:CDS
TACCTGGTACGAACATGAGA+AGG 0.628823 7_3:+78476136 None:intergenic
AGTAAAAGAAACATAAACAA+AGG 0.633072 7_3:+78472482 None:intergenic
ATACGAGTTTGCGCTGATGG+AGG 0.633325 7_3:-78476208 Msa1126940:CDS
TCTGTCGAGGGTCCACATTG+TGG 0.635034 7_3:-78473224 Msa1126940:CDS
GAGGTCCCACTGGAGTCCTG+TGG 0.635982 7_3:+78473163 None:intergenic
TTACTGTACAAATTATGGGA+GGG 0.636161 7_3:-78472453 Msa1126940:three_prime_UTR
CTTTATCATTGACCAAACAC+AGG 0.643382 7_3:-78476674 Msa1126940:five_prime_UTR
CTACAACCACAGGACTCCAG+TGG 0.662065 7_3:-78473169 Msa1126940:CDS
TACAACCACAGGACTCCAGT+GGG 0.664787 7_3:-78473168 Msa1126940:CDS
AACACATTTGTGTAAATCTG+TGG 0.677485 7_3:+78473762 None:intergenic
GTGGTTGTAGAACTTCCGGA+TGG 0.690304 7_3:+78473182 None:intergenic
GAGGCATTTCATCATACACA+CGG 0.695989 7_3:+78476179 None:intergenic
GAAGAAGAAGAAGTTTCCGG+TGG 0.697049 7_3:+78476407 None:intergenic
ATAGGAACGAGTCCACAATG+TGG 0.758602 7_3:+78473212 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATATGTTAAAAAATAAG+AGG - chr7_3:78472402-78472421 Msa1126940:three_prime_UTR 10.0%
!! ATATCTTATAATATAAAAGA+GGG + chr7_3:78472698-78472717 None:intergenic 10.0%
!! TATATCTTATAATATAAAAG+AGG + chr7_3:78472699-78472718 None:intergenic 10.0%
!!! TAATTGTAAATTTGTTTTGT+TGG + chr7_3:78472327-78472346 None:intergenic 15.0%
!! ATAAATAAATAACGCAAAAA+AGG - chr7_3:78472446-78472465 Msa1126940:three_prime_UTR 15.0%
!! TATCTTATAATATAAAAGAG+GGG + chr7_3:78472697-78472716 None:intergenic 15.0%
!!! AAAAAATGATTATCATTTTG+TGG + chr7_3:78472996-78473015 None:intergenic 15.0%
!!! TTGTGTTAATTGTTTTATTT+AGG - chr7_3:78473238-78473257 Msa1126940:CDS 15.0%
!!! TGTGTTAATTGTTTTATTTA+GGG - chr7_3:78473239-78473258 Msa1126940:CDS 15.0%
!! AGTTACATATCTTTAATATT+TGG + chr7_3:78473755-78473774 None:intergenic 15.0%
!! TCTAGTATTAAATTTATTAG+TGG + chr7_3:78474008-78474027 None:intergenic 15.0%
!! TATTCATAATATGAAACAAA+AGG - chr7_3:78474089-78474108 Msa1126940:intron 15.0%
!! ATTCATAATATGAAACAAAA+GGG - chr7_3:78474090-78474109 Msa1126940:intron 15.0%
!!! GTTATTGTTTTACTATTTAT+AGG - chr7_3:78474161-78474180 Msa1126940:intron 15.0%
!! AGATAAAATGATTTATGTTT+GGG + chr7_3:78474621-78474640 None:intergenic 15.0%
!! AAGATAAAATGATTTATGTT+TGG + chr7_3:78474622-78474641 None:intergenic 15.0%
!! AAAACATAAAGATATAGATA+GGG + chr7_3:78474985-78475004 None:intergenic 15.0%
!! AAAAACATAAAGATATAGAT+AGG + chr7_3:78474986-78475005 None:intergenic 15.0%
!! AACAAATTTACAATTAGTAG+CGG - chr7_3:78472331-78472350 Msa1126940:three_prime_UTR 20.0%
!! ATATGTTAAAAAATAAGAGG+AGG - chr7_3:78472405-78472424 Msa1126940:three_prime_UTR 20.0%
!! ACTAATTAGGTATAACTATA+AGG - chr7_3:78473074-78473093 Msa1126940:intron 20.0%
!! TTTGTAAAAAATAGCAACTT+TGG + chr7_3:78473154-78473173 None:intergenic 20.0%
!!! GTGTTAATTGTTTTATTTAG+GGG - chr7_3:78473240-78473259 Msa1126940:CDS 20.0%
!! TTTGAGTAAAATAGCAAAAA+TGG - chr7_3:78473373-78473392 Msa1126940:CDS 20.0%
!!! AAAAATGGTGATGTTTAAAA+TGG - chr7_3:78473388-78473407 Msa1126940:CDS 20.0%
!!! TCAAACTTAAGTAATTTTTC+TGG - chr7_3:78473651-78473670 Msa1126940:intron 20.0%
!! TTGTATATTTATGCTAATGA+TGG - chr7_3:78473729-78473748 Msa1126940:CDS 20.0%
!!! GTATTTCTTTTTGAATAGTA+TGG + chr7_3:78474033-78474052 None:intergenic 20.0%
!! TTGTACTAGTTGTATATAAT+TGG + chr7_3:78474141-78474160 None:intergenic 20.0%
!!! TCTTTATACATTATTGCTTT+TGG - chr7_3:78474352-78474371 Msa1126940:intron 20.0%
!!! CTTTATACATTATTGCTTTT+GGG - chr7_3:78474353-78474372 Msa1126940:intron 20.0%
!!! AATTGATTTTGGTATGTTAA+GGG - chr7_3:78474488-78474507 Msa1126940:intron 20.0%
!! ATGCAAAATCAATTCTAATT+AGG + chr7_3:78474515-78474534 None:intergenic 20.0%
!! GATAAAATGATTTATGTTTG+GGG + chr7_3:78474620-78474639 None:intergenic 20.0%
!!! TGATTTTGCATAATTGATTT+TGG + chr7_3:78474659-78474678 None:intergenic 20.0%
!!! CAATTATGCAAAATCAATTT+TGG - chr7_3:78474663-78474682 Msa1126940:intron 20.0%
!! TGGAGGATTATAAATTATAA+TGG - chr7_3:78474722-78474741 Msa1126940:intron 20.0%
!! ATTTATCAGTATTTGGTATA+AGG + chr7_3:78475246-78475265 None:intergenic 20.0%
!!! CTTTATTATTGAATTTTGCA+AGG - chr7_3:78475293-78475312 Msa1126940:intron 20.0%
!! AAGAATAAAAATAATGCATC+TGG + chr7_3:78475921-78475940 None:intergenic 20.0%
!! AGTTTATTTAGTTACTCATA+AGG + chr7_3:78475995-78476014 None:intergenic 20.0%
!! AGTAAAAGAAACATAAACAA+AGG + chr7_3:78476489-78476508 None:intergenic 20.0%
!! TTCATTTACTGTACAAATTA+TGG - chr7_3:78476510-78476529 Msa1126940:five_prime_UTR 20.0%
!! TCATTTACTGTACAAATTAT+GGG - chr7_3:78476511-78476530 Msa1126940:five_prime_UTR 20.0%
!!! TTCCATTATTATTGGTTATT+GGG + chr7_3:78476578-78476597 None:intergenic 20.0%
! ACAAATTTACAATTAGTAGC+GGG - chr7_3:78472332-78472351 Msa1126940:three_prime_UTR 25.0%
! AGATGATTCATGTATGTTAT+TGG - chr7_3:78472719-78472738 Msa1126940:CDS 25.0%
! GAAAAAAAAAAAGTTGTACC+TGG + chr7_3:78472851-78472870 None:intergenic 25.0%
!! ATGATTATCATTTTGTGGAT+AGG + chr7_3:78472991-78473010 None:intergenic 25.0%
!! CTATTCAATTAGTTTCTTGA+AGG - chr7_3:78473126-78473145 Msa1126940:intron 25.0%
! TCTACATTACGTATTATATG+TGG - chr7_3:78473178-78473197 Msa1126940:CDS 25.0%
! CTACATTACGTATTATATGT+GGG - chr7_3:78473179-78473198 Msa1126940:CDS 25.0%
! TACATTACGTATTATATGTG+GGG - chr7_3:78473180-78473199 Msa1126940:CDS 25.0%
! AGGGGTAATAAAATTAGAAA+AGG - chr7_3:78473258-78473277 Msa1126940:CDS 25.0%
! GTCAATCAGTAATTAAGTAA+TGG + chr7_3:78473546-78473565 None:intergenic 25.0%
!! AACTTAAGTAATTTTTCTGG+AGG - chr7_3:78473654-78473673 Msa1126940:intron 25.0%
! GTGAACTGAAAACATAAATA+AGG + chr7_3:78473789-78473808 None:intergenic 25.0%
!!! ACTTCATTTTTTGCTATACA+TGG - chr7_3:78473885-78473904 Msa1126940:intron 25.0%
!! GAAATTTTGAGCAATGTTTA+AGG + chr7_3:78474063-78474082 None:intergenic 25.0%
! ATATAATCTGTTGTCAATAG+CGG + chr7_3:78474274-78474293 None:intergenic 25.0%
! GACAACAGATTATATATAAG+TGG - chr7_3:78474279-78474298 Msa1126940:intron 25.0%
! AACAATATCTTTCAATGTGT+TGG - chr7_3:78474306-78474325 Msa1126940:intron 25.0%
! ACATGTACAAAATAGACATT+AGG + chr7_3:78474423-78474442 None:intergenic 25.0%
!!! GAATTGATTTTGGTATGTTA+AGG - chr7_3:78474487-78474506 Msa1126940:intron 25.0%
!! ATCGATTCTAACTTAAAGTT+CGG - chr7_3:78474540-78474559 Msa1126940:intron 25.0%
!!! AGTACTTGTTTTAGTTTTGT+TGG - chr7_3:78474793-78474812 Msa1126940:intron 25.0%
!! TATTATTGAATTTTGCAAGG+AGG - chr7_3:78475296-78475315 Msa1126940:intron 25.0%
! TAATTCTTTACTATCAAGCA+TGG + chr7_3:78475418-78475437 None:intergenic 25.0%
! AAATATACAAGATTCAAGCA+GGG + chr7_3:78475504-78475523 None:intergenic 25.0%
! TAAATATACAAGATTCAAGC+AGG + chr7_3:78475505-78475524 None:intergenic 25.0%
!! GTATATTTAGTTGTACCTTT+TGG - chr7_3:78475516-78475535 Msa1126940:intron 25.0%
! AAAATATGCAATACTTACTG+AGG + chr7_3:78475827-78475846 None:intergenic 25.0%
! CTGTTGTTAATTAGAGTTAT+AGG - chr7_3:78475947-78475966 Msa1126940:intron 25.0%
! TGTTAATTAGAGTTATAGGA+TGG - chr7_3:78475951-78475970 Msa1126940:intron 25.0%
!! TATTTTGTCAACAATTTCAG+AGG - chr7_3:78476226-78476245 Msa1126940:intron 25.0%
! AGCACATCAAATATTGTAAA+AGG - chr7_3:78476278-78476297 Msa1126940:intron 25.0%
! AATAAGACCCATCTAATTAA+TGG + chr7_3:78476414-78476433 None:intergenic 25.0%
! AGCAGATCTAACAAAAAAAA+AGG + chr7_3:78476464-78476483 None:intergenic 25.0%
! TTCCCAATAACCAATAATAA+TGG - chr7_3:78476573-78476592 Msa1126940:five_prime_UTR 25.0%
!! CTTCCATTATTATTGGTTAT+TGG + chr7_3:78476579-78476598 None:intergenic 25.0%
! AAAAACATACATCTAAGTCA+AGG + chr7_3:78476630-78476649 None:intergenic 25.0%
!!! TTTTTTCTTCCTTTCCCAAT+CGG - chr7_3:78472864-78472883 Msa1126940:intron 30.0%
!!! TTTTCTACTAGTTTAGCTCT+TGG - chr7_3:78472906-78472925 Msa1126940:intron 30.0%
TTCAGTACAGTAATGATTTC+TGG - chr7_3:78473015-78473034 Msa1126940:intron 30.0%
AAATTATTTGTAGCTGTAGC+TGG - chr7_3:78473213-78473232 Msa1126940:CDS 30.0%
!!! ACCTTTTTTGTAGTTGAGAA+AGG - chr7_3:78473329-78473348 Msa1126940:CDS 30.0%
ACCTTTCTCAACTACAAAAA+AGG + chr7_3:78473333-78473352 None:intergenic 30.0%
! AATGGTGATGTTTAAAATGG+AGG - chr7_3:78473391-78473410 Msa1126940:CDS 30.0%
! ATGGTGATGTTTAAAATGGA+GGG - chr7_3:78473392-78473411 Msa1126940:CDS 30.0%
ATAGAGAGAAATGTAGAGAA+AGG - chr7_3:78473449-78473468 Msa1126940:intron 30.0%
AGCATAAATATACAAGCCTT+AGG + chr7_3:78473724-78473743 None:intergenic 30.0%
TACTATTTATAGGTTCGCTT+TGG - chr7_3:78474171-78474190 Msa1126940:intron 30.0%
GTACAAAATAGACATTAGGT+GGG + chr7_3:78474419-78474438 None:intergenic 30.0%
TGTACAAAATAGACATTAGG+TGG + chr7_3:78474420-78474439 None:intergenic 30.0%
!! TGTTTGAATTCACTTTTGAG+AGG - chr7_3:78474440-78474459 Msa1126940:intron 30.0%
AAATAAACTTCACGTGCATT+TGG + chr7_3:78474700-78474719 None:intergenic 30.0%
CATAAAGATATAGATAGGGA+GGG + chr7_3:78474981-78475000 None:intergenic 30.0%
ACATAAAGATATAGATAGGG+AGG + chr7_3:78474982-78475001 None:intergenic 30.0%
TGTTTGTCAATGTCATGTAA+TGG - chr7_3:78475011-78475030 Msa1126940:intron 30.0%
GATTTAAGAACTCAACTTTC+TGG - chr7_3:78475041-78475060 Msa1126940:intron 30.0%
ATACAAAGTAGCAGTAACAT+AGG + chr7_3:78475093-78475112 None:intergenic 30.0%
AACACATTTGTGTAAATCTG+TGG + chr7_3:78475209-78475228 None:intergenic 30.0%
ACCAAATACTGATAAATCAG+AGG - chr7_3:78475249-78475268 Msa1126940:intron 30.0%
ACCTCTGATTTATCAGTATT+TGG + chr7_3:78475253-78475272 None:intergenic 30.0%
TCAGAGGTAAGTTAAATATC+TGG - chr7_3:78475265-78475284 Msa1126940:intron 30.0%
AAGCTGAGATTAATTCCAAA+AGG + chr7_3:78475534-78475553 None:intergenic 30.0%
TGACATATCTCTCAAAATGA+TGG - chr7_3:78475553-78475572 Msa1126940:intron 30.0%
ATCTTATGCGAGTAATTCTT+CGG + chr7_3:78475711-78475730 None:intergenic 30.0%
AGTAGAATATCAACACATGA+CGG - chr7_3:78476027-78476046 Msa1126940:intron 30.0%
ACTAACAAACAAGATCACAA+CGG + chr7_3:78476185-78476204 None:intergenic 30.0%
AATTTCTATCAAGAAGCTCT+AGG - chr7_3:78476343-78476362 Msa1126940:CDS 30.0%
! ATTAATGGACATGGAAGATA+TGG + chr7_3:78476399-78476418 None:intergenic 30.0%
TTCCATGTCCATTAATTAGA+TGG - chr7_3:78476403-78476422 Msa1126940:CDS 30.0%
TCCATGTCCATTAATTAGAT+GGG - chr7_3:78476404-78476423 Msa1126940:CDS 30.0%
!! ATGGGTCTTATTCCATTTAA+AGG - chr7_3:78476422-78476441 Msa1126940:CDS 30.0%
TTTACTGTACAAATTATGGG+AGG - chr7_3:78476514-78476533 Msa1126940:five_prime_UTR 30.0%
TTACTGTACAAATTATGGGA+GGG - chr7_3:78476515-78476534 Msa1126940:five_prime_UTR 30.0%
! AAGGGAGTTATTCATTGATT+TGG - chr7_3:78476541-78476560 Msa1126940:five_prime_UTR 30.0%
!! AGGGAGTTATTCATTGATTT+GGG - chr7_3:78476542-78476561 Msa1126940:five_prime_UTR 30.0%
! ACCAATAATAATGGAAGTTC+AGG - chr7_3:78476582-78476601 Msa1126940:five_prime_UTR 30.0%
TCCTGAACTTCCATTATTAT+TGG + chr7_3:78476586-78476605 None:intergenic 30.0%
TATTCGGCTTATTACATGAA+TGG + chr7_3:78476658-78476677 None:intergenic 30.0%
! GTACCAAAAACGTTGTTATT+CGG + chr7_3:78476674-78476693 None:intergenic 30.0%
CTTTATCATTGACCAAACAC+AGG - chr7_3:78472294-78472313 Msa1126940:three_prime_UTR 35.0%
! AAAAGGTTGTAGTGAGGTTT+TGG - chr7_3:78472463-78472482 Msa1126940:three_prime_UTR 35.0%
! TTCAACTTTTCTTCTTCCAC+CGG - chr7_3:78472545-78472564 Msa1126940:three_prime_UTR 35.0%
AAAGAGGGGTAAGAATTGAA+AGG + chr7_3:78472683-78472702 None:intergenic 35.0%
! TACGAACATGAGAAGGATTT+TGG + chr7_3:78472828-78472847 None:intergenic 35.0%
! TTTTTCTTCCTTTCCCAATC+GGG - chr7_3:78472865-78472884 Msa1126940:intron 35.0%
!!! ACTCTGTGTTTCACCTTTTT+TGG - chr7_3:78472942-78472961 Msa1126940:intron 35.0%
!!! CTCTGTGTTTCACCTTTTTT+GGG - chr7_3:78472943-78472962 Msa1126940:intron 35.0%
!!! TCTGTGTTTCACCTTTTTTG+GGG - chr7_3:78472944-78472963 Msa1126940:intron 35.0%
TTACGTATTATATGTGGGGA+TGG - chr7_3:78473184-78473203 Msa1126940:CDS 35.0%
TACGTATTATATGTGGGGAT+GGG - chr7_3:78473185-78473204 Msa1126940:CDS 35.0%
CTCAACTACAAAAAAGGTAG+AGG + chr7_3:78473327-78473346 None:intergenic 35.0%
! ATTACTGATTGACCTCAAGT+AGG - chr7_3:78473553-78473572 Msa1126940:intron 35.0%
AGTTTGATTCCTAGAGTTGT+TGG + chr7_3:78473638-78473657 None:intergenic 35.0%
GTGTTGGGAGAGTTTATATT+TGG + chr7_3:78473692-78473711 None:intergenic 35.0%
AGGTAATAGGAGTGAACTTA+TGG - chr7_3:78473819-78473838 Msa1126940:intron 35.0%
GGTAATAGGAGTGAACTTAT+GGG - chr7_3:78473820-78473839 Msa1126940:intron 35.0%
ATGTTGTCAATGCGAAAATG+CGG - chr7_3:78473916-78473935 Msa1126940:intron 35.0%
AAGGGATAGCAAAATCGAAA+AGG - chr7_3:78474108-78474127 Msa1126940:intron 35.0%
AGGGATAGCAAAATCGAAAA+GGG - chr7_3:78474109-78474128 Msa1126940:intron 35.0%
!!! GCTTTTGGGATTGATGTTAT+TGG - chr7_3:78474367-78474386 Msa1126940:intron 35.0%
! GAAGTCTTCGAAATCACTTT+TGG + chr7_3:78474467-78474486 None:intergenic 35.0%
!! CGAAGACTTCGAATTGATTT+TGG - chr7_3:78474477-78474496 Msa1126940:intron 35.0%
TGCACGTGAAGTTTATTTGT+TGG - chr7_3:78474702-78474721 Msa1126940:intron 35.0%
! ACGTGAAGTTTATTTGTTGG+AGG - chr7_3:78474705-78474724 Msa1126940:intron 35.0%
CACTAAAAGCTCTGTAAAAG+TGG - chr7_3:78474748-78474767 Msa1126940:intron 35.0%
!! GGTTTGTTTTTCTGTGTTAC+TGG - chr7_3:78474769-78474788 Msa1126940:intron 35.0%
!!! TAAGTGTTGAGTTTTCTGTC+AGG - chr7_3:78474879-78474898 Msa1126940:intron 35.0%
ACTTGATTTCTATGCAAACC+TGG - chr7_3:78474952-78474971 Msa1126940:intron 35.0%
TCACACCAAAATGCTGTTAT+TGG - chr7_3:78475065-78475084 Msa1126940:intron 35.0%
! AGGAACCAATAACAGCATTT+TGG + chr7_3:78475073-78475092 None:intergenic 35.0%
CCTGAAGTTGAAATTGACAA+CGG + chr7_3:78475337-78475356 None:intergenic 35.0%
! CTTCAGGCTTAGATAGTTTT+TGG - chr7_3:78475350-78475369 Msa1126940:intron 35.0%
TTACTATCAAGCATGGATGA+GGG + chr7_3:78475411-78475430 None:intergenic 35.0%
TTTACTATCAAGCATGGATG+AGG + chr7_3:78475412-78475431 None:intergenic 35.0%
ACTCATTTATGTGCTGTGAT+AGG + chr7_3:78475468-78475487 None:intergenic 35.0%
TTCATTCAATCTTCTGTCGA+GGG - chr7_3:78475732-78475751 Msa1126940:intron 35.0%
AGTTACTCATAAGGAACACA+AGG + chr7_3:78475986-78476005 None:intergenic 35.0%
CACAACGGAATGATTGAAAA+AGG + chr7_3:78476170-78476189 None:intergenic 35.0%
! GTTGTGATCTTGTTTGTTAG+TGG - chr7_3:78476184-78476203 Msa1126940:CDS 35.0%
AGTCTGATTCAGATCTTCTT+TGG - chr7_3:78476318-78476337 Msa1126940:intron 35.0%
! ACCCATCTAATTAATGGACA+TGG + chr7_3:78476408-78476427 None:intergenic 35.0%
! AAGAAAGTCTGGCCTTTAAA+TGG + chr7_3:78476437-78476456 None:intergenic 35.0%
AAAAAGGTCAGAAGAAAGTC+TGG + chr7_3:78476448-78476467 None:intergenic 35.0%
! AAGCCGAATAACAACGTTTT+TGG - chr7_3:78476668-78476687 Msa1126940:five_prime_UTR 35.0%
ACGCAAAAAAGGTTGTAGTG+AGG - chr7_3:78472457-78472476 Msa1126940:three_prime_UTR 40.0%
!! GAAGAGAAGCATCAATCGTT+AGG - chr7_3:78472497-78472516 Msa1126940:three_prime_UTR 40.0%
! GAAGCATCAATCGTTAGGAT+AGG - chr7_3:78472502-78472521 Msa1126940:three_prime_UTR 40.0%
CATCAATCGTTAGGATAGGA+TGG - chr7_3:78472506-78472525 Msa1126940:three_prime_UTR 40.0%
ACGGAAGAAGAAGAAGTTTC+CGG + chr7_3:78472567-78472586 None:intergenic 40.0%
! AAGAGCGTATGTCAGAGAAA+CGG + chr7_3:78472586-78472605 None:intergenic 40.0%
CAAAGCAAAGGAGCGAATTT+GGG + chr7_3:78472630-78472649 None:intergenic 40.0%
CAAATTCGCTCCTTTGCTTT+GGG - chr7_3:78472629-78472648 Msa1126940:CDS 40.0%
GGTAAGAATTGAAAGGATGG+GGG + chr7_3:78472676-78472695 None:intergenic 40.0%
GGGTAAGAATTGAAAGGATG+GGG + chr7_3:78472677-78472696 None:intergenic 40.0%
GGGGTAAGAATTGAAAGGAT+GGG + chr7_3:78472678-78472697 None:intergenic 40.0%
AGGGGTAAGAATTGAAAGGA+TGG + chr7_3:78472679-78472698 None:intergenic 40.0%
CATTTCATCATACACACGGT+TGG + chr7_3:78472788-78472807 None:intergenic 40.0%
! GAGGCATTTCATCATACACA+CGG + chr7_3:78472792-78472811 None:intergenic 40.0%
! TTTTGGTGAGGGAAGAAAAG+AGG + chr7_3:78472811-78472830 None:intergenic 40.0%
!! CATGAGAAGGATTTTGGTGA+GGG + chr7_3:78472822-78472841 None:intergenic 40.0%
!! ACATGAGAAGGATTTTGGTG+AGG + chr7_3:78472823-78472842 None:intergenic 40.0%
!!! CTGTGTTTCACCTTTTTTGG+GGG - chr7_3:78472945-78472964 Msa1126940:intron 40.0%
ACGTATTATATGTGGGGATG+GGG - chr7_3:78473186-78473205 Msa1126940:CDS 40.0%
ACCATTGAATCTAACGCAAG+TGG - chr7_3:78473282-78473301 Msa1126940:CDS 40.0%
ACCACTTGCGTTAGATTCAA+TGG + chr7_3:78473286-78473305 None:intergenic 40.0%
AGTTAGATGATCCAAATCCG+TGG - chr7_3:78473484-78473503 Msa1126940:intron 40.0%
GTTAGATGATCCAAATCCGT+GGG - chr7_3:78473485-78473504 Msa1126940:intron 40.0%
TTAGATGATCCAAATCCGTG+GGG - chr7_3:78473486-78473505 Msa1126940:intron 40.0%
!! GGCAATGCATCAGAAGTATT+TGG + chr7_3:78473525-78473544 None:intergenic 40.0%
!!! GAGTTGGTTTTTCGTTCTAG+CGG - chr7_3:78473578-78473597 Msa1126940:intron 40.0%
!!! AGTTGGTTTTTCGTTCTAGC+GGG - chr7_3:78473579-78473598 Msa1126940:intron 40.0%
TTGATTCCTAGAGTTGTTGG+AGG + chr7_3:78473635-78473654 None:intergenic 40.0%
AAACTCTCCCAACACTATTC+TGG - chr7_3:78473697-78473716 Msa1126940:intron 40.0%
CTTAGGACCAGAATAGTGTT+GGG + chr7_3:78473707-78473726 None:intergenic 40.0%
TTCAGTTCACATGCGTGTAT+AGG - chr7_3:78473799-78473818 Msa1126940:CDS 40.0%
CACATGCGTGTATAGGTAAT+AGG - chr7_3:78473806-78473825 Msa1126940:intron 40.0%
ATTTATAGGTTCGCTTTGGC+CGG - chr7_3:78474175-78474194 Msa1126940:intron 40.0%
! TCCTGATTTTTCCGCTATAG+CGG - chr7_3:78474239-78474258 Msa1126940:intron 40.0%
AGGTGGGAATAAAGTTCATC+TGG + chr7_3:78474403-78474422 None:intergenic 40.0%
!! TTCACGTGCATTTGGTTCTA+AGG + chr7_3:78474692-78474711 None:intergenic 40.0%
ATAATGGCAAACCAAGCTCT+AGG + chr7_3:78474822-78474841 None:intergenic 40.0%
GGTTTGCCATTATGAGTCTA+CGG - chr7_3:78474829-78474848 Msa1126940:intron 40.0%
GACTAACCGTAGACTCATAA+TGG + chr7_3:78474838-78474857 None:intergenic 40.0%
TACAAGCCTGATGCAATCAA+AGG - chr7_3:78474902-78474921 Msa1126940:intron 40.0%
ATGTCACCTTTGATTGCATC+AGG + chr7_3:78474911-78474930 None:intergenic 40.0%
TGATGCAATCAAAGGTGACA+TGG - chr7_3:78474910-78474929 Msa1126940:intron 40.0%
AAGGTGACATGGATTCAATC+AGG - chr7_3:78474921-78474940 Msa1126940:intron 40.0%
TCATTCCATGAATCATGTCG+AGG - chr7_3:78475120-78475139 Msa1126940:intron 40.0%
CATTCCATGAATCATGTCGA+GGG - chr7_3:78475121-78475140 Msa1126940:intron 40.0%
AATTGACGAGTCTCAAGATC+AGG - chr7_3:78475180-78475199 Msa1126940:intron 40.0%
! TGAATTTTGCAAGGAGGAGA+CGG - chr7_3:78475302-78475321 Msa1126940:intron 40.0%
CCGTTGTCAATTTCAACTTC+AGG - chr7_3:78475334-78475353 Msa1126940:intron 40.0%
ACAAGATTCAAGCAGGGATA+AGG + chr7_3:78475498-78475517 None:intergenic 40.0%
TGAGGCAATCATCAGATAGA+AGG + chr7_3:78475677-78475696 None:intergenic 40.0%
TCTTCGGAAGAAGTTGAATG+AGG + chr7_3:78475695-78475714 None:intergenic 40.0%
CTTCATTCAATCTTCTGTCG+AGG - chr7_3:78475731-78475750 Msa1126940:intron 40.0%
ATTGTGGACTCGTTCCTATT+GGG - chr7_3:78475760-78475779 Msa1126940:intron 40.0%
ACAAATTATGGGAGGGTGAA+AGG - chr7_3:78476522-78476541 Msa1126940:five_prime_UTR 40.0%
CAAATTATGGGAGGGTGAAA+GGG - chr7_3:78476523-78476542 Msa1126940:five_prime_UTR 40.0%
! GTTGGTTTCGTACCTGTGTT+TGG + chr7_3:78472309-78472328 None:intergenic 45.0%
GAAGAAGAAGAAGTTTCCGG+TGG + chr7_3:78472564-78472583 None:intergenic 45.0%
CCAAAGCAAAGGAGCGAATT+TGG + chr7_3:78472631-78472650 None:intergenic 45.0%
CCAAATTCGCTCCTTTGCTT+TGG - chr7_3:78472628-78472647 Msa1126940:CDS 45.0%
CATATACGAGTTTGCGCTGA+TGG - chr7_3:78472757-78472776 Msa1126940:intron 45.0%
ATCCTTCTCATGTTCGTACC+AGG - chr7_3:78472830-78472849 Msa1126940:intron 45.0%
TACCTGGTACGAACATGAGA+AGG + chr7_3:78472835-78472854 None:intergenic 45.0%
TTTCAGAACCCGATTGGGAA+AGG + chr7_3:78472876-78472895 None:intergenic 45.0%
CACGATTTCAGAACCCGATT+GGG + chr7_3:78472881-78472900 None:intergenic 45.0%
! CATTTTGTGGATAGGACCAC+CGG + chr7_3:78472983-78473002 None:intergenic 45.0%
TGCAAAATGCATCACGTCTG+TGG - chr7_3:78473098-78473117 Msa1126940:intron 45.0%
! TAACGCAAGTGGTTGATGCA+CGG - chr7_3:78473293-78473312 Msa1126940:CDS 45.0%
TAGATGATCCAAATCCGTGG+GGG - chr7_3:78473487-78473506 Msa1126940:intron 45.0%
ACTGATTGACCTCAAGTAGG+CGG - chr7_3:78473556-78473575 Msa1126940:intron 45.0%
TAGCTACCTCCAACAACTCT+AGG - chr7_3:78473626-78473645 Msa1126940:intron 45.0%
CCTTAGGACCAGAATAGTGT+TGG + chr7_3:78473708-78473727 None:intergenic 45.0%
CCAACACTATTCTGGTCCTA+AGG - chr7_3:78473705-78473724 Msa1126940:intron 45.0%
! ACCGCTATAGCGGAAAAATC+AGG + chr7_3:78474243-78474262 None:intergenic 45.0%
! GATTTTTCCGCTATAGCGGT+CGG - chr7_3:78474243-78474262 Msa1126940:intron 45.0%
!! ACGTGCATTTGGTTCTAAGG+TGG + chr7_3:78474689-78474708 None:intergenic 45.0%
!! TTTGTTGGTGACCTAGAGCT+TGG - chr7_3:78474808-78474827 Msa1126940:intron 45.0%
! GTCTACGGTTAGTCGATTAC+AGG - chr7_3:78474844-78474863 Msa1126940:intron 45.0%
TATAGATAGGGAGGGATACC+AGG + chr7_3:78474973-78474992 None:intergenic 45.0%
AAGACCCTCGACATGATTCA+TGG + chr7_3:78475128-78475147 None:intergenic 45.0%
GAATCATGTCGAGGGTCTTA+TGG - chr7_3:78475129-78475148 Msa1126940:intron 45.0%
! GAATTTTGCAAGGAGGAGAC+GGG - chr7_3:78475303-78475322 Msa1126940:intron 45.0%
! AATTTTGCAAGGAGGAGACG+GGG - chr7_3:78475304-78475323 Msa1126940:intron 45.0%
TCAAGCAGGGATAAGGTCTA+AGG + chr7_3:78475491-78475510 None:intergenic 45.0%
! CAGCTATGCATTCTTGCTGT+TGG - chr7_3:78475576-78475595 Msa1126940:intron 45.0%
!! ATTCTTGCTGTTGGAGCACT+TGG - chr7_3:78475585-78475604 Msa1126940:intron 45.0%
GGGAGATTTGATCACGAGAT+TGG - chr7_3:78475609-78475628 Msa1126940:intron 45.0%
TAGAAGGATAATGCGCGTGT+TGG + chr7_3:78475661-78475680 None:intergenic 45.0%
ATAGGAACGAGTCCACAATG+TGG + chr7_3:78475759-78475778 None:intergenic 45.0%
CATTGTGGACTCGTTCCTAT+TGG - chr7_3:78475759-78475778 Msa1126940:intron 45.0%
TCCTGTGGTTGTAGAACTTC+CGG + chr7_3:78475793-78475812 None:intergenic 45.0%
AATACTTACTGAGGTCCCAC+TGG + chr7_3:78475818-78475837 None:intergenic 45.0%
GAGGACACAGAGATGAGATT+TGG - chr7_3:78476245-78476264 Msa1126940:intron 45.0%
GACACAGAGATGAGATTTGG+CGG - chr7_3:78476248-78476267 Msa1126940:intron 45.0%
TACATGTTGCATACTGCACC+TGG - chr7_3:78476369-78476388 Msa1126940:CDS 45.0%
CATGGAAGATATGGAAAGCC+AGG + chr7_3:78476390-78476409 None:intergenic 45.0%
!! ATAAATAAATAATACTAATT+AGG - chr7_3:78473061-78473080 Msa1126940:intron 5.0%
ATACCGTGGTCCCAAAGCAA+AGG + chr7_3:78472642-78472661 None:intergenic 50.0%
GGGTGCAGAAAGAAATACCG+TGG + chr7_3:78472656-78472675 None:intergenic 50.0%
! ATACGAGTTTGCGCTGATGG+AGG - chr7_3:78472760-78472779 Msa1126940:intron 50.0%
GCACGATTTCAGAACCCGAT+TGG + chr7_3:78472882-78472901 None:intergenic 50.0%
AATGGCAGAGCCCCCAAAAA+AGG + chr7_3:78472958-78472977 None:intergenic 50.0%
AAACCAACTCCGCCTACTTG+AGG + chr7_3:78473568-78473587 None:intergenic 50.0%
CGCGTGTCAAAAGTGGAAAC+CGG + chr7_3:78474197-78474216 None:intergenic 50.0%
! GTCGAGGGTCTTATGGTCTT+TGG - chr7_3:78475136-78475155 Msa1126940:intron 50.0%
! TATGGTCTTTGGCTTCCTGC+AGG - chr7_3:78475147-78475166 Msa1126940:intron 50.0%
! ATGGTCTTTGGCTTCCTGCA+GGG - chr7_3:78475148-78475167 Msa1126940:intron 50.0%
CAATTATCTTCGTCCCCTGC+AGG + chr7_3:78475165-78475184 None:intergenic 50.0%
! ATTTTGCAAGGAGGAGACGG+GGG - chr7_3:78475305-78475324 Msa1126940:intron 50.0%
! TTGCTGTTGGAGCACTTGGT+GGG - chr7_3:78475589-78475608 Msa1126940:intron 50.0%
GTTCCTATTGGGATGCCATC+CGG - chr7_3:78475771-78475790 Msa1126940:intron 50.0%
GTGGTTGTAGAACTTCCGGA+TGG + chr7_3:78475789-78475808 None:intergenic 50.0%
TCCGGAAGTTCTACAACCAC+AGG - chr7_3:78475789-78475808 Msa1126940:intron 50.0%
TACAACCACAGGACTCCAGT+GGG - chr7_3:78475800-78475819 Msa1126940:intron 50.0%
!! GCTCCTTTGCTTTGGGACCA+CGG - chr7_3:78472636-78472655 Msa1126940:CDS 55.0%
TGGATAGGACCACCGGTGAA+TGG + chr7_3:78472976-78472995 None:intergenic 55.0%
TGACCTCAAGTAGGCGGAGT+TGG - chr7_3:78473562-78473581 Msa1126940:intron 55.0%
GTCAATGCGAAAATGCGGCG+TGG - chr7_3:78473921-78473940 Msa1126940:intron 55.0%
AAAATCAGGACCACCGCACC+AGG + chr7_3:78474229-78474248 None:intergenic 55.0%
! TGGTCTTTGGCTTCCTGCAG+GGG - chr7_3:78475149-78475168 Msa1126940:intron 55.0%
!! CTTGCTGTTGGAGCACTTGG+TGG - chr7_3:78475588-78475607 Msa1126940:intron 55.0%
TCTGTCGAGGGTCCACATTG+TGG - chr7_3:78475744-78475763 Msa1126940:intron 55.0%
CTTCCGGATGGCATCCCAAT+AGG + chr7_3:78475777-78475796 None:intergenic 55.0%
CTACAACCACAGGACTCCAG+TGG - chr7_3:78475799-78475818 Msa1126940:intron 55.0%
TTGGGGGCTCTGCCATTCAC+CGG - chr7_3:78472961-78472980 Msa1126940:intron 60.0%
TGTGTGTGCCCCCACGGATT+TGG + chr7_3:78473498-78473517 None:intergenic 60.0%
GGATCTTGTGTGTGCCCCCA+CGG + chr7_3:78473504-78473523 None:intergenic 60.0%
TGCGGCGTGGCCAACTCAAT+TGG - chr7_3:78473934-78473953 Msa1126940:intron 60.0%
CGTGGCCAACTCAATTGGCG+CGG - chr7_3:78473939-78473958 Msa1126940:intron 60.0%
CCAACTCAATTGGCGCGGTG+CGG - chr7_3:78473944-78473963 Msa1126940:intron 60.0%
CAACTCAATTGGCGCGGTGC+GGG - chr7_3:78473945-78473964 Msa1126940:intron 60.0%
GCGCGTAGCAGGCGCTATTT+CGG - chr7_3:78473974-78473993 Msa1126940:intron 60.0%
! CGTAGCAGGCGCTATTTCGG+TGG - chr7_3:78473977-78473996 Msa1126940:intron 60.0%
!! ACTTTTGACACGCGCCGACG+CGG - chr7_3:78474203-78474222 Msa1126940:intron 60.0%
TTCCGCTATAGCGGTCGGTG+CGG - chr7_3:78474248-78474267 Msa1126940:intron 60.0%
CCGCACCGCGCCAATTGAGT+TGG + chr7_3:78473947-78473966 None:intergenic 65.0%
! GCGTCGGCGCGTGTCAAAAG+TGG + chr7_3:78474204-78474223 None:intergenic 65.0%
GAGGTCCCACTGGAGTCCTG+TGG + chr7_3:78475808-78475827 None:intergenic 65.0%
GGGGCTCTGCCATTCACCGG+TGG - chr7_3:78472964-78472983 Msa1126940:intron 70.0%
CAATTGGCGCGGTGCGGGAG+CGG - chr7_3:78473950-78473969 Msa1126940:intron 70.0%
AATTGGCGCGGTGCGGGAGC+GGG - chr7_3:78473951-78473970 Msa1126940:intron 70.0%
! GGCCGCACCGACCGCTATAG+CGG + chr7_3:78474253-78474272 None:intergenic 70.0%
ATTGGCGCGGTGCGGGAGCG+GGG - chr7_3:78473952-78473971 Msa1126940:intron 75.0%
ACCACCGCACCAGGCCGCGT+CGG + chr7_3:78474220-78474239 None:intergenic 75.0%
!! TGACACGCGCCGACGCGGCC+TGG - chr7_3:78474208-78474227 Msa1126940:intron 80.0%
! GCGGGAGCGGGGCGCGTAGC+AGG - chr7_3:78473963-78473982 Msa1126940:intron 85.0%
!! CGCGCCGACGCGGCCTGGTG+CGG - chr7_3:78474213-78474232 Msa1126940:intron 85.0%
! GCCGACGCGGCCTGGTGCGG+TGG - chr7_3:78474216-78474235 Msa1126940:intron 85.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 78472294 78476696 78472294 ID=Msa1126940;Name=Msa1126940
chr7_3 mRNA 78472294 78476696 78472294 ID=Msa1126940-mRNA-1;Parent=Msa1126940;Name=Msa1126940-mRNA-1;_AED=0.02;_eAED=0.02;_QI=231|1|1|1|1|1|6|332|257
chr7_3 exon 78472294 78472744 78472294 ID=Msa1126940-mRNA-1:exon:21937;Parent=Msa1126940-mRNA-1
chr7_3 exon 78473162 78473411 78473162 ID=Msa1126940-mRNA-1:exon:21936;Parent=Msa1126940-mRNA-1
chr7_3 exon 78473720 78473821 78473720 ID=Msa1126940-mRNA-1:exon:21935;Parent=Msa1126940-mRNA-1
chr7_3 exon 78474017 78474089 78474017 ID=Msa1126940-mRNA-1:exon:21934;Parent=Msa1126940-mRNA-1
chr7_3 exon 78476139 78476235 78476139 ID=Msa1126940-mRNA-1:exon:21933;Parent=Msa1126940-mRNA-1
chr7_3 exon 78476333 78476696 78476333 ID=Msa1126940-mRNA-1:exon:21932;Parent=Msa1126940-mRNA-1
chr7_3 five_prime_UTR 78476466 78476696 78476466 ID=Msa1126940-mRNA-1:five_prime_utr;Parent=Msa1126940-mRNA-1
chr7_3 CDS 78476333 78476465 78476333 ID=Msa1126940-mRNA-1:cds;Parent=Msa1126940-mRNA-1
chr7_3 CDS 78476139 78476235 78476139 ID=Msa1126940-mRNA-1:cds;Parent=Msa1126940-mRNA-1
chr7_3 CDS 78474017 78474089 78474017 ID=Msa1126940-mRNA-1:cds;Parent=Msa1126940-mRNA-1
chr7_3 CDS 78473720 78473821 78473720 ID=Msa1126940-mRNA-1:cds;Parent=Msa1126940-mRNA-1
chr7_3 CDS 78473162 78473411 78473162 ID=Msa1126940-mRNA-1:cds;Parent=Msa1126940-mRNA-1
chr7_3 CDS 78472626 78472744 78472626 ID=Msa1126940-mRNA-1:cds;Parent=Msa1126940-mRNA-1
chr7_3 three_prime_UTR 78472294 78472625 78472294 ID=Msa1126940-mRNA-1:three_prime_utr;Parent=Msa1126940-mRNA-1
Gene Sequence

>Msa1126940

ATGGAGTTGATGTGTCATTGTTCAACTTTTCTTCTTCCACCGGAAACTTCTTCTTCTTCCGTTTCTCTGACATACGCTCTTGTTATTCTCAATCAAAATCTTCCCAAATTCGCTCCTTTGCTTTGGGACCACGCTCATATACGAGTTTGCGCTGATGGAGGTGCCAACCGTGTGTATGATGAAATGCCTCTTTTCTTCCCTCACCAAAATCCTTCTCATGTTCGTACCAGGTACAAGCCTGATGCAATCAAAGGTGACATGGATTCAATCAGGACAGAAGTACTTGATTTCTATGCAAACCTGGGGACGAAGATAATTGACGAGTCTCAAGATCAGGACACCACAGATTTACACAAATGTGTTGCATACATTCGTGACCTTATACCAAATACTGATAAATCAGAGCTATGCATTCTTGCTGTTGGAGCACTTGGTGGGAGATTTGATCACGAGATTGGAAATATTAATGTGCTATGTCGATTCTCCAACACGCGCATTATCCTTCTATCTGATGATTGCCTCATTCAACTTCTTCCGAAGAATTACTCGCATAAGATCTTCATTCAATCTTCTGTCGAGGGTCCACATTGTGGACTCGTTCCTATTGGGATGCCATCCGGAAGTTCTACAACCACAGGACTCCAGTGGGACCTCAAGGACACAGAGATGAGATTTGGCGGTTTAGTAAGCACATCAAATATTGTAAAAGGAGATATAGTAACAGTACAGTCTGATTCAGATCTTCTTTGGACAATTTCTATCAAGAAGCTCTAG
Protein sequence

>Msa1126940

MELMCHCSTFLLPPETSSSSVSLTYALVILNQNLPKFAPLLWDHAHIRVCADGGANRVYDEMPLFFPHQNPSHVRTRYKPDAIKGDMDSIRTEVLDFYANLGTKIIDESQDQDTTDLHKCVAYIRDLIPNTDKSELCILAVGALGGRFDHEIGNINVLCRFSNTRIILLSDDCLIQLLPKNYSHKIFIQSSVEGPHCGLVPIGMPSGSSTTTGLQWDLKDTEMRFGGLVSTSNIVKGDIVTVQSDSDLLWTISIKKL*