Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0594840 | XP_024637093.2 | 84.478 | 335 | 27 | 2 | 1 | 310 | 1 | 335 | 0.0 | 544 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0594840 | sp|Q84K35|PUMY_ARATH | 61.905 | 336 | 94 | 3 | 2 | 312 | 3 | 329 | 4.78e-133 | 384 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017510 | Msa0594840 | 0.802116 | 6.534025e-49 | -8.615850e-47 |
| Msa0157290 | Msa0594840 | 0.802087 | 6.624673e-49 | -8.615850e-47 |
| Msa0211150 | Msa0594840 | 0.811491 | 6.816920e-51 | -8.615850e-47 |
| Msa0216910 | Msa0594840 | 0.803304 | 3.716453e-49 | -8.615850e-47 |
| Msa0428080 | Msa0594840 | 0.806020 | 1.007467e-49 | -8.615850e-47 |
| Msa0310750 | Msa0594840 | 0.806072 | 9.825731e-50 | -8.615850e-47 |
| Msa0501460 | Msa0594840 | 0.821912 | 3.137868e-53 | -8.615850e-47 |
| Msa0531180 | Msa0594840 | 0.813639 | 2.312013e-51 | -8.615850e-47 |
| Msa0594840 | Msa0615710 | 0.808961 | 2.394881e-50 | -8.615850e-47 |
| Msa0594840 | Msa0681270 | 0.804103 | 2.536075e-49 | -8.615850e-47 |
| Msa0594840 | Msa0907950 | 0.818044 | 2.406364e-52 | -8.615850e-47 |
| Msa0594840 | Msa0931520 | 0.803186 | 3.930352e-49 | -8.615850e-47 |
| Msa0594840 | Msa0945970 | 0.803344 | 3.646623e-49 | -8.615850e-47 |
| Msa0594840 | Msa0969600 | 0.805657 | 1.200783e-49 | -8.615850e-47 |
| Msa0594840 | Msa1014540 | 0.802059 | 6.715256e-49 | -8.615850e-47 |
| Msa0594840 | Msa1124960 | 0.801104 | 1.053791e-48 | -8.615850e-47 |
| Msa0594840 | Msa1225130 | 0.806594 | 7.624253e-50 | -8.615850e-47 |
| Msa0594840 | Msa1242670 | 0.810322 | 1.221082e-50 | -8.615850e-47 |
| Msa0594840 | Msa1283860 | 0.811366 | 7.255843e-51 | -8.615850e-47 |
| Msa0594840 | Msa1284680 | 0.813881 | 2.044514e-51 | -8.615850e-47 |
| Msa0594840 | Msa1327680 | 0.801486 | 8.801266e-49 | -8.615850e-47 |
| Msa0594840 | Msa1395900 | 0.814463 | 1.520905e-51 | -8.615850e-47 |
| Msa0594840 | Msa1411020 | 0.811630 | 6.358447e-51 | -8.615850e-47 |
| Msa0594840 | Msa1424290 | 0.810936 | 8.996858e-51 | -8.615850e-47 |
| Msa0594840 | Msa1434350 | 0.808603 | 2.856051e-50 | -8.615850e-47 |
| Msa0594840 | Msa1439320 | 0.812092 | 5.044644e-51 | -8.615850e-47 |
| Msa0594840 | Msa1440810 | 0.800500 | 1.399752e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0594840 | MtrunA17_Chr4g0013851 | 84.478 | 335 | 27 | 2 | 1 | 310 | 1 | 335 | 0.0 | 544 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0594840 | AT1G50510.1 | 61.905 | 336 | 94 | 3 | 2 | 312 | 3 | 329 | 4.85e-134 | 384 |
Find 96 sgRNAs with CRISPR-Local
Find 503 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTCTCAATATAGTATTTC+TGG | 0.147685 | 4_2:+23181364 | None:intergenic |
| GTGAAGAATAATGCCCTTAT+TGG | 0.153218 | 4_2:-23182574 | Msa0594840:CDS |
| TACCTTGTTGACTTTGTTAT+AGG | 0.206909 | 4_2:+23188048 | None:intergenic |
| GTCTTTGTGACTGGTGGTAT+TGG | 0.219521 | 4_2:-23186440 | Msa0594840:CDS |
| TCTTTGTGACTGGTGGTATT+GGG | 0.236714 | 4_2:-23186439 | Msa0594840:CDS |
| TCCTAGGACCCTTGAATATC+TGG | 0.282778 | 4_2:-23185691 | Msa0594840:intron |
| TTTCTGTGCAATCAAATAAA+AGG | 0.300636 | 4_2:+23181458 | None:intergenic |
| CCTCAAGAACAGTCGGCTTC+TGG | 0.307982 | 4_2:-23183078 | Msa0594840:CDS |
| CAGCAACTTTAGCTCCAATA+AGG | 0.319503 | 4_2:+23182560 | None:intergenic |
| ACTTGAAAGGTTAGCTACTT+TGG | 0.339699 | 4_2:-23187094 | Msa0594840:CDS |
| TTACAGCATGTGTACGGCTT+TGG | 0.351652 | 4_2:-23181580 | Msa0594840:three_prime_UTR |
| TCTAAAATTGCAATAGTTGC+AGG | 0.353501 | 4_2:+23187569 | None:intergenic |
| TGTAGGGAAAATAATATATC+AGG | 0.358832 | 4_2:-23182848 | Msa0594840:intron |
| CTTGAAAGGTTAGCTACTTT+GGG | 0.365927 | 4_2:-23187093 | Msa0594840:CDS |
| TAGAATACCATGTGAAATAA+TGG | 0.372331 | 4_2:+23187746 | None:intergenic |
| AAGTTCACCTTGCTTCTTCA+AGG | 0.391127 | 4_2:+23183025 | None:intergenic |
| TGCTGGTGTAAAGTCAATAT+TGG | 0.394779 | 4_2:-23185718 | Msa0594840:CDS |
| TTAGATGGCGTGCCTATCAT+AGG | 0.402532 | 4_2:-23187551 | Msa0594840:intron |
| AATTGTTTCGTAGGAGAGAC+TGG | 0.411773 | 4_2:-23181508 | Msa0594840:three_prime_UTR |
| AGCAACTTTAGCTCCAATAA+GGG | 0.432199 | 4_2:+23182561 | None:intergenic |
| TCTTCAGATATCACCGAACT+TGG | 0.433238 | 4_2:-23185765 | Msa0594840:CDS |
| AATTTACAGATTTAACTTCC+AGG | 0.438652 | 4_2:+23184053 | None:intergenic |
| TACTGGTGTTCTTCCAAGTT+CGG | 0.444688 | 4_2:+23185752 | None:intergenic |
| GCCGACTGTTCTTGAGGAAT+AGG | 0.445716 | 4_2:+23183084 | None:intergenic |
| AAATTTGCAAACTGCGAAAG+AGG | 0.448124 | 4_2:-23187624 | Msa0594840:CDS |
| AGACATTGCATTTACCATAC+AGG | 0.461766 | 4_2:+23181337 | None:intergenic |
| ATAAACCTTAGCAAGTAAAG+TGG | 0.467669 | 4_2:-23181402 | Msa0594840:three_prime_UTR |
| TAGTCCCACTTTACTTGCTA+AGG | 0.468878 | 4_2:+23181397 | None:intergenic |
| CTTTGTGACTGGTGGTATTG+GGG | 0.476846 | 4_2:-23186438 | Msa0594840:CDS |
| GTTTCTGAAGCGTTGTCACT+AGG | 0.478898 | 4_2:-23187795 | Msa0594840:CDS |
| GGACTAGAAATACCTATGAT+AGG | 0.478899 | 4_2:+23187539 | None:intergenic |
| TGCTGTGGGTTGGCTGCGAC+CGG | 0.486297 | 4_2:+23188778 | None:intergenic |
| AGTCAATATTGGATATTCCT+AGG | 0.489632 | 4_2:-23185707 | Msa0594840:CDS |
| TTGATTCTCTTCTGTTCCGC+CGG | 0.494241 | 4_2:-23188797 | Msa0594840:five_prime_UTR |
| AGGGCGTGCAGTTGTTGCTC+TGG | 0.495573 | 4_2:-23187775 | Msa0594840:CDS |
| ATCAAACTCAAGGTCGGAAG+TGG | 0.496465 | 4_2:-23183123 | Msa0594840:CDS |
| GGTATACATGTCTTTGTGAC+TGG | 0.498326 | 4_2:-23186449 | Msa0594840:CDS |
| TTATTTGAATAGGTCTCAGC+GGG | 0.500112 | 4_2:-23187122 | Msa0594840:intron |
| CCAGCACATATAACTGCTAC+TGG | 0.504204 | 4_2:+23185735 | None:intergenic |
| TTTACTCTATCAAGCAAGAA+AGG | 0.504931 | 4_2:+23182812 | None:intergenic |
| AGTATGCATGGCTGATATGA+AGG | 0.505453 | 4_2:-23181657 | Msa0594840:three_prime_UTR |
| CTTGCTCTGCTAAGAGAAAA+CGG | 0.507945 | 4_2:-23182532 | Msa0594840:CDS |
| TACAGATACGGACTGTGCTG+TGG | 0.508881 | 4_2:+23188763 | None:intergenic |
| TGAAGCAAGTGAGGCACCTC+CGG | 0.513459 | 4_2:+23182781 | None:intergenic |
| ACCAGATATTCAAGGGTCCT+AGG | 0.516969 | 4_2:+23185690 | None:intergenic |
| AGTTCACCTTGCTTCTTCAA+GGG | 0.521769 | 4_2:+23183026 | None:intergenic |
| ATTGAGAATGTGTTCCTGTA+TGG | 0.524818 | 4_2:-23181351 | Msa0594840:three_prime_UTR |
| CAAACTGCGAAAGAGGTTGA+AGG | 0.526352 | 4_2:-23187617 | Msa0594840:CDS |
| GAAGGCGAGGCTTACAGATA+CGG | 0.533375 | 4_2:+23188751 | None:intergenic |
| TGCCTTTAGGTGGCTAGAGG+AGG | 0.534145 | 4_2:-23186627 | Msa0594840:intron |
| AAATGTTCAATTAGTATGCA+TGG | 0.535092 | 4_2:-23181669 | Msa0594840:three_prime_UTR |
| GAAGGTATTGTGAGAGAGAA+TGG | 0.536788 | 4_2:-23187599 | Msa0594840:CDS |
| CCAGTAGCAGTTATATGTGC+TGG | 0.538807 | 4_2:-23185735 | Msa0594840:CDS |
| TCCTATTCCTCAAGAACAGT+CGG | 0.538907 | 4_2:-23183085 | Msa0594840:CDS |
| GCCTTTAGGTGGCTAGAGGA+GGG | 0.541502 | 4_2:-23186626 | Msa0594840:intron |
| ATTATCTTACAGCATGTGTA+CGG | 0.544344 | 4_2:-23181586 | Msa0594840:three_prime_UTR |
| AGAGGAAGGAAAAGATAGAG+CGG | 0.547707 | 4_2:-23181551 | Msa0594840:three_prime_UTR |
| ATTTACAGATTTAACTTCCA+GGG | 0.551195 | 4_2:+23184054 | None:intergenic |
| TTTCTGAAGCGTTGTCACTA+GGG | 0.551379 | 4_2:-23187794 | Msa0594840:CDS |
| CAATGTGAAGGTAGCTTCAG+AGG | 0.552640 | 4_2:-23187817 | Msa0594840:CDS |
| GGGTTTGATATGCAGCATAC+AGG | 0.553080 | 4_2:-23187867 | Msa0594840:intron |
| CATACAGGAGTTAATGCTGT+TGG | 0.561292 | 4_2:-23187852 | Msa0594840:CDS |
| AATTTCATACCAGATATTCA+AGG | 0.561418 | 4_2:+23185682 | None:intergenic |
| AGCTCAGAAAACAGCTCGAA+GGG | 0.563723 | 4_2:-23187064 | Msa0594840:CDS |
| TCGAAGATTGTTTATCCGCA+AGG | 0.565876 | 4_2:+23188084 | None:intergenic |
| TGTTGCCTTTAGGTGGCTAG+AGG | 0.567377 | 4_2:-23186630 | Msa0594840:intron |
| TTTGTGACTGGTGGTATTGG+GGG | 0.567764 | 4_2:-23186437 | Msa0594840:CDS |
| TTGATTGCACAGAAAGTGAG+AGG | 0.575033 | 4_2:-23181450 | Msa0594840:three_prime_UTR |
| CCAGAAGCCGACTGTTCTTG+AGG | 0.575935 | 4_2:+23183078 | None:intergenic |
| CAAGAGATAGAGTAGCACAT+TGG | 0.589132 | 4_2:-23181707 | Msa0594840:exon |
| TGCTAAGAGAAAACGGACAA+AGG | 0.592059 | 4_2:-23182525 | Msa0594840:intron |
| ATTTCATACCAGATATTCAA+GGG | 0.593872 | 4_2:+23185683 | None:intergenic |
| ATACGGACTGTGCTGTGGGT+TGG | 0.596429 | 4_2:+23188768 | None:intergenic |
| TGATTGCACAGAAAGTGAGA+GGG | 0.598092 | 4_2:-23181449 | Msa0594840:three_prime_UTR |
| TAGGTGGCTAGAGGAGGGAA+TGG | 0.600626 | 4_2:-23186621 | Msa0594840:CDS |
| ATACATGTCTTTGTGACTGG+TGG | 0.611323 | 4_2:-23186446 | Msa0594840:CDS |
| GAGCTCAGAAAACAGCTCGA+AGG | 0.611591 | 4_2:-23187065 | Msa0594840:CDS |
| TGACATCTTCAGCAGCCTTG+CGG | 0.611605 | 4_2:-23188099 | Msa0594840:CDS |
| TGTGGGTTGGCTGCGACCGG+CGG | 0.611607 | 4_2:+23188781 | None:intergenic |
| GGCTTTGGAAAGAAAGAGGA+AGG | 0.613954 | 4_2:-23181565 | Msa0594840:three_prime_UTR |
| AGAAGCAAACATCAAACTCA+AGG | 0.615668 | 4_2:-23183133 | Msa0594840:CDS |
| GTACGGCTTTGGAAAGAAAG+AGG | 0.619658 | 4_2:-23181569 | Msa0594840:three_prime_UTR |
| TAAACCTTAGCAAGTAAAGT+GGG | 0.622275 | 4_2:-23181401 | Msa0594840:three_prime_UTR |
| TCAGCGGGGAAGAACTTGAA+AGG | 0.624836 | 4_2:-23187107 | Msa0594840:CDS |
| ACAGATACGGACTGTGCTGT+GGG | 0.625970 | 4_2:+23188764 | None:intergenic |
| GCAAACATCAAACTCAAGGT+CGG | 0.627317 | 4_2:-23183129 | Msa0594840:CDS |
| GAGGATACTTGAAGCAAGTG+AGG | 0.630119 | 4_2:+23182772 | None:intergenic |
| GATAGAGTAAATGCACTCAC+CGG | 0.642406 | 4_2:-23182800 | Msa0594840:CDS |
| GAATCTACCATTATTTCACA+TGG | 0.645983 | 4_2:-23187753 | Msa0594840:intron |
| AGCTTCGTCGATCAATGTGA+AGG | 0.651893 | 4_2:-23187829 | Msa0594840:CDS |
| GCGTATAAATGCATTCACCC+TGG | 0.659727 | 4_2:-23184071 | Msa0594840:CDS |
| GATTGCACAGAAAGTGAGAG+GGG | 0.663657 | 4_2:-23181448 | Msa0594840:three_prime_UTR |
| TTCCTATAACAAAGTCAACA+AGG | 0.678590 | 4_2:-23188050 | Msa0594840:intron |
| AGAGTAAATGCACTCACCGG+AGG | 0.692180 | 4_2:-23182797 | Msa0594840:CDS |
| TTTATTTGAATAGGTCTCAG+CGG | 0.703989 | 4_2:-23187123 | Msa0594840:intron |
| TATTTGAATAGGTCTCAGCG+GGG | 0.831711 | 4_2:-23187121 | Msa0594840:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAGTTAAAATTAATTATGA+TGG | - | chr4_2:23181673-23181692 | Msa0594840:three_prime_UTR | 10.0% |
| !!! | ATATATTTTCTGTTAAATTA+AGG | - | chr4_2:23184096-23184115 | Msa0594840:intron | 10.0% |
| !!! | AAATTTTCTAAAACTTAATA+AGG | - | chr4_2:23188315-23188334 | Msa0594840:intron | 10.0% |
| !! | TTTATGTATTATTTATAAGC+TGG | - | chr4_2:23181847-23181866 | Msa0594840:intron | 15.0% |
| !!! | AAATTTTGAAACATAACTTA+TGG | - | chr4_2:23182231-23182250 | Msa0594840:intron | 15.0% |
| !!! | TTTTTGTATTGTTATTTTCA+CGG | - | chr4_2:23182428-23182447 | Msa0594840:intron | 15.0% |
| !! | TTGTGCTTAAAATTAATTAA+TGG | + | chr4_2:23182662-23182681 | None:intergenic | 15.0% |
| !!! | ATATTGTTTTGATTTTTCTT+TGG | - | chr4_2:23184332-23184351 | Msa0594840:intron | 15.0% |
| !!! | TTATCTTTTTACTTTAGTTT+TGG | + | chr4_2:23185490-23185509 | None:intergenic | 15.0% |
| !! | AAAACTAAAGTAAAAAGATA+AGG | - | chr4_2:23185489-23185508 | Msa0594840:intron | 15.0% |
| !! | TGTAACAAAACATATAAAAT+AGG | + | chr4_2:23188353-23188372 | None:intergenic | 15.0% |
| !! | TCAAAGTAAGAATAGTAAAA+TGG | + | chr4_2:23181436-23181455 | None:intergenic | 20.0% |
| !! | AAATTATTATTATACCAGTG+TGG | + | chr4_2:23181484-23181503 | None:intergenic | 20.0% |
| !! | GATAATAGTAGAAATTTCAA+GGG | - | chr4_2:23181595-23181614 | Msa0594840:three_prime_UTR | 20.0% |
| !! | ATAATAGTAGAAATTTCAAG+GGG | - | chr4_2:23181596-23181615 | Msa0594840:three_prime_UTR | 20.0% |
| !! | AATACGATATAGAATATCAT+AGG | + | chr4_2:23181735-23181754 | None:intergenic | 20.0% |
| !! | TATTATTTATAAGCTGGTAA+AGG | - | chr4_2:23181853-23181872 | Msa0594840:intron | 20.0% |
| !! | ATAATCCAAAAACTAAGATA+CGG | + | chr4_2:23182461-23182480 | None:intergenic | 20.0% |
| !! | GACATATACAAACATAAATA+TGG | + | chr4_2:23183137-23183156 | None:intergenic | 20.0% |
| !!! | AAAATTCATTTTCATCATGA+AGG | - | chr4_2:23183319-23183338 | Msa0594840:intron | 20.0% |
| !!! | AAATTCATTTTCATCATGAA+GGG | - | chr4_2:23183320-23183339 | Msa0594840:intron | 20.0% |
| !! | CAAAATAAATCTCATCAAAT+AGG | - | chr4_2:23183357-23183376 | Msa0594840:intron | 20.0% |
| !! | GTTAATCTTCTATATCTTAA+TGG | - | chr4_2:23183748-23183767 | Msa0594840:intron | 20.0% |
| !! | TTTATAAGTGAAATATGCAA+AGG | + | chr4_2:23183861-23183880 | None:intergenic | 20.0% |
| !!! | TTCACTTATAAAATTTTCCT+TGG | - | chr4_2:23183869-23183888 | Msa0594840:intron | 20.0% |
| !! | AATTGTAAGATAAACAAGAA+AGG | - | chr4_2:23183901-23183920 | Msa0594840:intron | 20.0% |
| !! | ATTGTAAGATAAACAAGAAA+GGG | - | chr4_2:23183902-23183921 | Msa0594840:intron | 20.0% |
| !! | ATTAAGGTCAAACTTATAAA+AGG | - | chr4_2:23184112-23184131 | Msa0594840:intron | 20.0% |
| !!! | ATAAAAATACTAGTCTTACA+TGG | + | chr4_2:23184307-23184326 | None:intergenic | 20.0% |
| !!! | TAAGACTAGTATTTTTATTG+TGG | - | chr4_2:23184309-23184328 | Msa0594840:intron | 20.0% |
| !!! | TCATTGTTTTTATCTTGAAT+AGG | - | chr4_2:23184534-23184553 | Msa0594840:intron | 20.0% |
| !!! | TTAAATTTTGGTTTACCAAA+TGG | - | chr4_2:23185972-23185991 | Msa0594840:intron | 20.0% |
| !!! | TTCCATTTTATATAGATGAA+GGG | + | chr4_2:23186122-23186141 | None:intergenic | 20.0% |
| !! | AATATAGTTGAAATGGTTAT+AGG | - | chr4_2:23186225-23186244 | Msa0594840:intron | 20.0% |
| !! | AACTCATTATATAATCAACA+GGG | + | chr4_2:23186514-23186533 | None:intergenic | 20.0% |
| !! | TAACTCATTATATAATCAAC+AGG | + | chr4_2:23186515-23186534 | None:intergenic | 20.0% |
| !!! | GCTTTTTTTTTTACTCATAT+GGG | + | chr4_2:23186946-23186965 | None:intergenic | 20.0% |
| !!! | TGCTTTTTTTTTTACTCATA+TGG | + | chr4_2:23186947-23186966 | None:intergenic | 20.0% |
| !! | TAAAATATTCAATTTGGATG+TGG | + | chr4_2:23187497-23187516 | None:intergenic | 20.0% |
| !! | ACTAGGTAAAATATTCAATT+TGG | + | chr4_2:23187503-23187522 | None:intergenic | 20.0% |
| !! | ATTCATAGTTTATAATGGTA+AGG | + | chr4_2:23187675-23187694 | None:intergenic | 20.0% |
| !!! | AAGTTTTTAACCTATGATTT+TGG | - | chr4_2:23188265-23188284 | Msa0594840:intron | 20.0% |
| !! | AATGAGAGGGAATTTAAAAT+TGG | + | chr4_2:23181409-23181428 | None:intergenic | 25.0% |
| !! | TATTATCCCTTGAATTTTCA+CGG | + | chr4_2:23181582-23181601 | None:intergenic | 25.0% |
| ! | GGATAATAGTAGAAATTTCA+AGG | - | chr4_2:23181594-23181613 | Msa0594840:three_prime_UTR | 25.0% |
| ! | CTAAAATAAGTCAATCCAAA+CGG | + | chr4_2:23181791-23181810 | None:intergenic | 25.0% |
| ! | TAAATCCTTGAATATTAAGC+AGG | - | chr4_2:23182007-23182026 | Msa0594840:intron | 25.0% |
| ! | TAGAATACCATGTGAAATAA+TGG | + | chr4_2:23182392-23182411 | None:intergenic | 25.0% |
| ! | TAATCCAAAAACTAAGATAC+GGG | + | chr4_2:23182460-23182479 | None:intergenic | 25.0% |
| ! | TATTGATGTTGGATTTCAAA+TGG | - | chr4_2:23182816-23182835 | Msa0594840:CDS | 25.0% |
| ! | AACAAACATTTGCAACAATT+GGG | + | chr4_2:23182942-23182961 | None:intergenic | 25.0% |
| ! | TGAGACCTATTCAAATAAAA+GGG | + | chr4_2:23183011-23183030 | None:intergenic | 25.0% |
| ! | AGTATGTAAAATCACATTGA+AGG | + | chr4_2:23183469-23183488 | None:intergenic | 25.0% |
| ! | ATCTTAATGGTAGAAACAAT+TGG | - | chr4_2:23183761-23183780 | Msa0594840:intron | 25.0% |
| !! | CTTATAAAATTTTCCTTGGA+TGG | - | chr4_2:23183873-23183892 | Msa0594840:intron | 25.0% |
| ! | TTGTAAGATAAACAAGAAAG+GGG | - | chr4_2:23183903-23183922 | Msa0594840:intron | 25.0% |
| !!! | AAAGTTCTTATGTTTCTAGA+GGG | + | chr4_2:23184256-23184275 | None:intergenic | 25.0% |
| !!! | TAAAGTTCTTATGTTTCTAG+AGG | + | chr4_2:23184257-23184276 | None:intergenic | 25.0% |
| ! | ATTTCATACCAGATATTCAA+GGG | + | chr4_2:23184455-23184474 | None:intergenic | 25.0% |
| ! | AATTTCATACCAGATATTCA+AGG | + | chr4_2:23184456-23184475 | None:intergenic | 25.0% |
| ! | TATTTGATAGAACATTATGG+CGG | + | chr4_2:23184699-23184718 | None:intergenic | 25.0% |
| ! | TGGTATTTGATAGAACATTA+TGG | + | chr4_2:23184702-23184721 | None:intergenic | 25.0% |
| ! | GTTCTATCAAATACCATATT+TGG | - | chr4_2:23184706-23184725 | Msa0594840:intron | 25.0% |
| ! | AACCATTAGAAAAGATTTAG+AGG | + | chr4_2:23184746-23184765 | None:intergenic | 25.0% |
| !! | TTTTCTAATGGTTTCTCTAA+TGG | - | chr4_2:23184753-23184772 | Msa0594840:intron | 25.0% |
| !!! | TAGAAAAGTTGGTAGAAAAT+AGG | + | chr4_2:23184888-23184907 | None:intergenic | 25.0% |
| ! | AAGTAAAAAGATAAGGACTT+AGG | - | chr4_2:23185496-23185515 | Msa0594840:intron | 25.0% |
| ! | AGTAAAAAGATAAGGACTTA+GGG | - | chr4_2:23185497-23185516 | Msa0594840:intron | 25.0% |
| ! | ATTCCAATCTATAAGAACAA+GGG | + | chr4_2:23185933-23185952 | None:intergenic | 25.0% |
| ! | GTTACATTATGTATAAAGCA+AGG | + | chr4_2:23186006-23186025 | None:intergenic | 25.0% |
| !! | ATTTACAGATTTAACTTCCA+GGG | + | chr4_2:23186084-23186103 | None:intergenic | 25.0% |
| !! | AATTTACAGATTTAACTTCC+AGG | + | chr4_2:23186085-23186104 | None:intergenic | 25.0% |
| ! | TTCCCTTCATCTATATAAAA+TGG | - | chr4_2:23186117-23186136 | Msa0594840:intron | 25.0% |
| !! | GTTCCATTTTATATAGATGA+AGG | + | chr4_2:23186123-23186142 | None:intergenic | 25.0% |
| ! | AACTCTCAATATAGTTGAAA+TGG | - | chr4_2:23186218-23186237 | Msa0594840:intron | 25.0% |
| !!! | TGAATGACGTATTCTTTTTT+TGG | - | chr4_2:23186442-23186461 | Msa0594840:CDS | 25.0% |
| !!! | GAATGACGTATTCTTTTTTT+GGG | - | chr4_2:23186443-23186462 | Msa0594840:CDS | 25.0% |
| ! | ACTCATTATATAATCAACAG+GGG | + | chr4_2:23186513-23186532 | None:intergenic | 25.0% |
| !! | GAAATGCATTTTTCACATAA+TGG | + | chr4_2:23186581-23186600 | None:intergenic | 25.0% |
| ! | CACAATATATTTCAATTCAC+TGG | - | chr4_2:23186626-23186645 | Msa0594840:intron | 25.0% |
| !! | TCAAAATAGGCTTTATGATT+TGG | - | chr4_2:23186651-23186670 | Msa0594840:intron | 25.0% |
| !! | CAAAATAGGCTTTATGATTT+GGG | - | chr4_2:23186652-23186671 | Msa0594840:intron | 25.0% |
| !!! | TTGGTTGACAATCTATTTTT+TGG | - | chr4_2:23186804-23186823 | Msa0594840:intron | 25.0% |
| !! | TAAAAAAAAAAGCACATACG+TGG | - | chr4_2:23186953-23186972 | Msa0594840:intron | 25.0% |
| ! | CCAGAAGAATAAAAATTAGA+AGG | + | chr4_2:23186981-23187000 | None:intergenic | 25.0% |
| !! | CCTTCTAATTTTTATTCTTC+TGG | - | chr4_2:23186978-23186997 | Msa0594840:intron | 25.0% |
| ! | CATTAACATTGCTTATTAAC+TGG | - | chr4_2:23187176-23187195 | Msa0594840:intron | 25.0% |
| !! | TATATTATTTTCCCTACAAG+TGG | + | chr4_2:23187285-23187304 | None:intergenic | 25.0% |
| ! | TGTAGGGAAAATAATATATC+AGG | - | chr4_2:23187287-23187306 | Msa0594840:intron | 25.0% |
| ! | TTGTTGAAAAACTTCAAAAG+AGG | + | chr4_2:23187385-23187404 | None:intergenic | 25.0% |
| ! | TTAAGATATGCTTCAAAACT+AGG | + | chr4_2:23187520-23187539 | None:intergenic | 25.0% |
| ! | TAGTTTATAATGGTAAGGAT+CGG | + | chr4_2:23187670-23187689 | None:intergenic | 25.0% |
| ! | GGAACATTCATAGTTTATAA+TGG | + | chr4_2:23187680-23187699 | None:intergenic | 25.0% |
| ! | TACATAATACTATCACACTA+AGG | + | chr4_2:23187701-23187720 | None:intergenic | 25.0% |
| ! | AGTGTGATAGTATTATGTAA+TGG | - | chr4_2:23187702-23187721 | Msa0594840:intron | 25.0% |
| !! | GTACATATCAAATTAACTTG+CGG | - | chr4_2:23187739-23187758 | Msa0594840:intron | 25.0% |
| ! | TAATTTCTACATGAATGAGT+CGG | + | chr4_2:23187843-23187862 | None:intergenic | 25.0% |
| !!! | ATTTTTAGAGTTACAGAACT+AGG | + | chr4_2:23187952-23187971 | None:intergenic | 25.0% |
| ! | TACTTGCAATGTTCAAATAA+AGG | + | chr4_2:23188108-23188127 | None:intergenic | 25.0% |
| !! | CTATCAAACTTTAGAAACAA+GGG | + | chr4_2:23188140-23188159 | None:intergenic | 25.0% |
| ! | GCACTTTAACATAATGAATA+GGG | + | chr4_2:23188173-23188192 | None:intergenic | 25.0% |
| ! | TGCACTTTAACATAATGAAT+AGG | + | chr4_2:23188174-23188193 | None:intergenic | 25.0% |
| !! | TTTTAACCTATGATTTTGGA+TGG | - | chr4_2:23188269-23188288 | Msa0594840:intron | 25.0% |
| ! | ACTTAATAAGGATTAAAGCA+TGG | - | chr4_2:23188327-23188346 | Msa0594840:intron | 25.0% |
| ! | AAATGTTCAATTAGTATGCA+TGG | - | chr4_2:23188466-23188485 | Msa0594840:intron | 25.0% |
| !! | TTTTTCTTCAATTGTTTCGT+AGG | - | chr4_2:23188618-23188637 | Msa0594840:intron | 25.0% |
| ! | TTTCTGTGCAATCAAATAAA+AGG | + | chr4_2:23188680-23188699 | None:intergenic | 25.0% |
| ! | CATTCTCAATATAGTATTTC+TGG | + | chr4_2:23188774-23188793 | None:intergenic | 25.0% |
| ! | AGAGGGAATTTAAAATTGGA+AGG | + | chr4_2:23181405-23181424 | None:intergenic | 30.0% |
| GTAAAATGGAAAGAATGAGA+GGG | + | chr4_2:23181422-23181441 | None:intergenic | 30.0% | |
| AGTAAAATGGAAAGAATGAG+AGG | + | chr4_2:23181423-23181442 | None:intergenic | 30.0% | |
| ATTGTTTCCGTGAAAATTCA+AGG | - | chr4_2:23181572-23181591 | Msa0594840:three_prime_UTR | 30.0% | |
| TTGTTTCCGTGAAAATTCAA+GGG | - | chr4_2:23181573-23181592 | Msa0594840:three_prime_UTR | 30.0% | |
| AATTATGATGGTTATGACAG+AGG | - | chr4_2:23181685-23181704 | Msa0594840:three_prime_UTR | 30.0% | |
| TATTTATAAGCTGGTAAAGG+TGG | - | chr4_2:23181856-23181875 | Msa0594840:intron | 30.0% | |
| TTTCATAAGCTCAATCCAAA+TGG | - | chr4_2:23181953-23181972 | Msa0594840:intron | 30.0% | |
| AACTACCTGCTTAATATTCA+AGG | + | chr4_2:23182015-23182034 | None:intergenic | 30.0% | |
| TTCCTATAACAAAGTCAACA+AGG | - | chr4_2:23182085-23182104 | Msa0594840:intron | 30.0% | |
| !! | TACCTTGTTGACTTTGTTAT+AGG | + | chr4_2:23182090-23182109 | None:intergenic | 30.0% |
| ATAACAAAGTCAACAAGGTA+CGG | - | chr4_2:23182090-23182109 | Msa0594840:intron | 30.0% | |
| GAATGTAAGAACTTTCGAAA+GGG | + | chr4_2:23182191-23182210 | None:intergenic | 30.0% | |
| GAATCTACCATTATTTCACA+TGG | - | chr4_2:23182382-23182401 | Msa0594840:intron | 30.0% | |
| ! | TGGATTATGCTCATGTTTTT+AGG | - | chr4_2:23182473-23182492 | Msa0594840:intron | 30.0% |
| !! | GGATTATGCTCATGTTTTTA+GGG | - | chr4_2:23182474-23182493 | Msa0594840:intron | 30.0% |
| !! | GTTTGCAAATTTTGAGGATA+TGG | + | chr4_2:23182503-23182522 | None:intergenic | 30.0% |
| ! | TCTAAAATTGCAATAGTTGC+AGG | + | chr4_2:23182569-23182588 | None:intergenic | 30.0% |
| ! | GCAACTATTGCAATTTTAGA+TGG | - | chr4_2:23182569-23182588 | Msa0594840:CDS | 30.0% |
| AGAACAATTAGGATAGAAAC+GGG | + | chr4_2:23182783-23182802 | None:intergenic | 30.0% | |
| GAGAACAATTAGGATAGAAA+CGG | + | chr4_2:23182784-23182803 | None:intergenic | 30.0% | |
| TTGGAATGAAGAGAACAATT+AGG | + | chr4_2:23182794-23182813 | None:intergenic | 30.0% | |
| !! | GTTTGTCTTTAAGATTTCGT+GGG | + | chr4_2:23182904-23182923 | None:intergenic | 30.0% |
| ACAAACATTTGCAACAATTG+GGG | + | chr4_2:23182941-23182960 | None:intergenic | 30.0% | |
| CAACAAACATTTGCAACAAT+TGG | + | chr4_2:23182943-23182962 | None:intergenic | 30.0% | |
| CTGAGACCTATTCAAATAAA+AGG | + | chr4_2:23183012-23183031 | None:intergenic | 30.0% | |
| TTTATTTGAATAGGTCTCAG+CGG | - | chr4_2:23183012-23183031 | Msa0594840:intron | 30.0% | |
| ! | CTAACAGATTGCTATTGTTA+AGG | + | chr4_2:23183171-23183190 | None:intergenic | 30.0% |
| ! | AAGTACATTTTCCACTTCTT+TGG | + | chr4_2:23183202-23183221 | None:intergenic | 30.0% |
| AATTTGTCTATGTTGCCTTT+AGG | - | chr4_2:23183495-23183514 | Msa0594840:intron | 30.0% | |
| CAGTGTATGAAAATTTACCA+TGG | + | chr4_2:23183575-23183594 | None:intergenic | 30.0% | |
| AGAACAACATTAAGAAATCG+TGG | + | chr4_2:23183599-23183618 | None:intergenic | 30.0% | |
| AACCAAAATGACATGATACA+GGG | + | chr4_2:23183636-23183655 | None:intergenic | 30.0% | |
| AAACCAAAATGACATGATAC+AGG | + | chr4_2:23183637-23183656 | None:intergenic | 30.0% | |
| ! | TATGCAAAGGTTGATTCATT+TGG | + | chr4_2:23183848-23183867 | None:intergenic | 30.0% |
| ACACACATATATTGCTTTGT+AGG | + | chr4_2:23184048-23184067 | None:intergenic | 30.0% | |
| TAAAAGGAACCACATTATAG+TGG | - | chr4_2:23184128-23184147 | Msa0594840:intron | 30.0% | |
| CATAAATCTCCACTATAATG+TGG | + | chr4_2:23184140-23184159 | None:intergenic | 30.0% | |
| AGTCAATATTGGATATTCCT+AGG | - | chr4_2:23184428-23184447 | Msa0594840:intron | 30.0% | |
| TATCTTGAATAGGAAACACA+AGG | - | chr4_2:23184544-23184563 | Msa0594840:intron | 30.0% | |
| ! | GACCTCTAAATCTTTTCTAA+TGG | - | chr4_2:23184741-23184760 | Msa0594840:intron | 30.0% |
| ! | GTTTCTCTAATGGTTTTCTT+AGG | - | chr4_2:23184763-23184782 | Msa0594840:intron | 30.0% |
| ! | TCTACCAACTTTTCTACTAT+AGG | - | chr4_2:23184892-23184911 | Msa0594840:intron | 30.0% |
| TTACACGGTTTAGATATCTT+GGG | + | chr4_2:23185224-23185243 | None:intergenic | 30.0% | |
| ATATCTAAACCGTGTAACTT+GGG | - | chr4_2:23185227-23185246 | Msa0594840:intron | 30.0% | |
| TGGAATGTAACTTCAGTAAA+AGG | + | chr4_2:23185299-23185318 | None:intergenic | 30.0% | |
| !!! | TTTAGTTTTGGATGTACTGA+CGG | + | chr4_2:23185478-23185497 | None:intergenic | 30.0% |
| TATTGTTATGGGAAAATCTC+CGG | - | chr4_2:23185539-23185558 | Msa0594840:intron | 30.0% | |
| !!! | AGTTTTCATTGATTTGGAGA+AGG | + | chr4_2:23185697-23185716 | None:intergenic | 30.0% |
| !! | GCACTTAGTTTTCATTGATT+TGG | + | chr4_2:23185703-23185722 | None:intergenic | 30.0% |
| TTCCAATCTATAAGAACAAG+GGG | + | chr4_2:23185932-23185951 | None:intergenic | 30.0% | |
| GATTCCAATCTATAAGAACA+AGG | + | chr4_2:23185934-23185953 | None:intergenic | 30.0% | |
| TCTTATAGATTGGAATCAAG+TGG | - | chr4_2:23185937-23185956 | Msa0594840:intron | 30.0% | |
| !! | CTGCAAGGTACTTTAAATTT+TGG | - | chr4_2:23185960-23185979 | Msa0594840:intron | 30.0% |
| TCTCTTATTCTTGCTTGTTT+GGG | - | chr4_2:23186146-23186165 | Msa0594840:intron | 30.0% | |
| AATCTGTATCAATGTCATGA+TGG | + | chr4_2:23186341-23186360 | None:intergenic | 30.0% | |
| ATCATGACATTGATACAGAT+TGG | - | chr4_2:23186340-23186359 | Msa0594840:intron | 30.0% | |
| TCATGACATTGATACAGATT+GGG | - | chr4_2:23186341-23186360 | Msa0594840:intron | 30.0% | |
| AAATTGTCTTGCATCAGATA+TGG | + | chr4_2:23186384-23186403 | None:intergenic | 30.0% | |
| TTTAAAAAGAGGCAGATAGA+AGG | + | chr4_2:23186474-23186493 | None:intergenic | 30.0% | |
| !! | CAATTCACTGGTTTCAAAAT+AGG | - | chr4_2:23186638-23186657 | Msa0594840:intron | 30.0% |
| ! | GTTTTCGCCTATCATTATTA+TGG | - | chr4_2:23186705-23186724 | Msa0594840:intron | 30.0% |
| AATGCTGCCATAATAATGAT+AGG | + | chr4_2:23186715-23186734 | None:intergenic | 30.0% | |
| ATGATGTACTAAATCGAGTT+TGG | - | chr4_2:23186785-23186804 | Msa0594840:intron | 30.0% | |
| !!! | GACAATCTATTTTTTGGTCA+TGG | - | chr4_2:23186810-23186829 | Msa0594840:intron | 30.0% |
| !!! | TTCTTCAAGGGCTTTTTTTA+TGG | + | chr4_2:23187100-23187119 | None:intergenic | 30.0% |
| ! | ATTTAACATTTGCCACTTGT+AGG | - | chr4_2:23187270-23187289 | Msa0594840:intron | 30.0% |
| ! | TTTAACATTTGCCACTTGTA+GGG | - | chr4_2:23187271-23187290 | Msa0594840:intron | 30.0% |
| TTTACTCTATCAAGCAAGAA+AGG | + | chr4_2:23187326-23187345 | None:intergenic | 30.0% | |
| ACAAGAGCAATGTCTAAATA+TGG | + | chr4_2:23187543-23187562 | None:intergenic | 30.0% | |
| !! | ATATCAAATTAACTTGCGGT+TGG | - | chr4_2:23187743-23187762 | Msa0594840:intron | 30.0% |
| AATGTTGGAATATGTTTCGA+GGG | + | chr4_2:23188045-23188064 | None:intergenic | 30.0% | |
| AAATGTTGGAATATGTTTCG+AGG | + | chr4_2:23188046-23188065 | None:intergenic | 30.0% | |
| TCCAACATTTACAATCTTGT+TGG | - | chr4_2:23188056-23188075 | Msa0594840:CDS | 30.0% | |
| ! | ACTTTAGAAACAAGGGAAAT+TGG | + | chr4_2:23188133-23188152 | None:intergenic | 30.0% |
| ! | GCTATCAAACTTTAGAAACA+AGG | + | chr4_2:23188141-23188160 | None:intergenic | 30.0% |
| !! | GTTTCTAAAGTTTGATAGCT+AGG | - | chr4_2:23188142-23188161 | Msa0594840:intron | 30.0% |
| ! | AAGAGTCAAATTAACTTGAG+AGG | - | chr4_2:23188235-23188254 | Msa0594840:intron | 30.0% |
| ATCATACCATCCAAAATCAT+AGG | + | chr4_2:23188278-23188297 | None:intergenic | 30.0% | |
| TACGTGCATTTCATATTTAC+AGG | - | chr4_2:23188402-23188421 | Msa0594840:intron | 30.0% | |
| ATTATCTTACAGCATGTGTA+CGG | - | chr4_2:23188549-23188568 | Msa0594840:intron | 30.0% | |
| ATAAACCTTAGCAAGTAAAG+TGG | - | chr4_2:23188733-23188752 | Msa0594840:intron | 30.0% | |
| TAAACCTTAGCAAGTAAAGT+GGG | - | chr4_2:23188734-23188753 | Msa0594840:intron | 30.0% | |
| ! | GAATTTAAAATTGGAAGGCG+AGG | + | chr4_2:23181400-23181419 | None:intergenic | 35.0% |
| ! | TCATAGGTAACTGATTCATC+TGG | + | chr4_2:23181719-23181738 | None:intergenic | 35.0% |
| ! | TAGGCGTTTAGTTGACTTAT+TGG | + | chr4_2:23181763-23181782 | None:intergenic | 35.0% |
| !!! | AGGTTTTTTATCGCACCATT+TGG | + | chr4_2:23181971-23181990 | None:intergenic | 35.0% |
| !! | TTTAGCTTTCTAACAGCTCA+AGG | + | chr4_2:23181991-23182010 | None:intergenic | 35.0% |
| TTTGCAACATACACTGATGA+CGG | + | chr4_2:23182136-23182155 | None:intergenic | 35.0% | |
| CGAATGTAAGAACTTTCGAA+AGG | + | chr4_2:23182192-23182211 | None:intergenic | 35.0% | |
| CTTATGGACAAAATGCAACA+CGG | - | chr4_2:23182247-23182266 | Msa0594840:intron | 35.0% | |
| TTATGGACAAAATGCAACAC+GGG | - | chr4_2:23182248-23182267 | Msa0594840:intron | 35.0% | |
| !! | GAAACCCGTATCTTAGTTTT+TGG | - | chr4_2:23182453-23182472 | Msa0594840:intron | 35.0% |
| ! | TTCGCAGTTTGCAAATTTTG+AGG | + | chr4_2:23182509-23182528 | None:intergenic | 35.0% |
| AAATTTGCAAACTGCGAAAG+AGG | - | chr4_2:23182511-23182530 | Msa0594840:intron | 35.0% | |
| GGACTAGAAATACCTATGAT+AGG | + | chr4_2:23182599-23182618 | None:intergenic | 35.0% | |
| TAATTGAATGCAAAGACCGA+AGG | + | chr4_2:23182623-23182642 | None:intergenic | 35.0% | |
| TGATCCAAGAAGAATGATGA+CGG | - | chr4_2:23182688-23182707 | Msa0594840:intron | 35.0% | |
| ! | TCATTCCAACGTATTGATGT+TGG | - | chr4_2:23182805-23182824 | Msa0594840:CDS | 35.0% |
| GAAATCCAACATCAATACGT+TGG | + | chr4_2:23182813-23182832 | None:intergenic | 35.0% | |
| TTCTTGTTCAGTCAATTTGC+AGG | + | chr4_2:23182856-23182875 | None:intergenic | 35.0% | |
| !! | GGTTTGTCTTTAAGATTTCG+TGG | + | chr4_2:23182905-23182924 | None:intergenic | 35.0% |
| GAAATCTTAAAGACAAACCG+AGG | - | chr4_2:23182906-23182925 | Msa0594840:intron | 35.0% | |
| TTATTTGAATAGGTCTCAGC+GGG | - | chr4_2:23183013-23183032 | Msa0594840:intron | 35.0% | |
| ! | ACTTGAAAGGTTAGCTACTT+TGG | - | chr4_2:23183041-23183060 | Msa0594840:CDS | 35.0% |
| ! | CTTGAAAGGTTAGCTACTTT+GGG | - | chr4_2:23183042-23183061 | Msa0594840:CDS | 35.0% |
| AATGAATCAAAAGCTCGTTC+TGG | - | chr4_2:23183401-23183420 | Msa0594840:intron | 35.0% | |
| !! | TGTTTCTGCGACAATGTTTT+TGG | - | chr4_2:23183546-23183565 | Msa0594840:intron | 35.0% |
| TAGTAAGATGCAACATGTTC+TGG | - | chr4_2:23183808-23183827 | Msa0594840:intron | 35.0% | |
| ! | ACATGTTCTGGTCTAACTTT+TGG | - | chr4_2:23183820-23183839 | Msa0594840:intron | 35.0% |
| ! | CATGTTCTGGTCTAACTTTT+GGG | - | chr4_2:23183821-23183840 | Msa0594840:intron | 35.0% |
| TTACAATTGTTGTCCATCCA+AGG | + | chr4_2:23183889-23183908 | None:intergenic | 35.0% | |
| TGGAGATTTATGTGTAGTGT+GGG | - | chr4_2:23184148-23184167 | Msa0594840:intron | 35.0% | |
| TGCTGGTGTAAAGTCAATAT+TGG | - | chr4_2:23184417-23184436 | Msa0594840:intron | 35.0% | |
| ! | CAATGAGTTGGATCCAAATA+TGG | + | chr4_2:23184722-23184741 | None:intergenic | 35.0% |
| AGATTTAGAGGTCAATGAGT+TGG | + | chr4_2:23184734-23184753 | None:intergenic | 35.0% | |
| AAGAAGAGTAGATCAAATGG+AGG | + | chr4_2:23184818-23184837 | None:intergenic | 35.0% | |
| GGTAAGAAGAGTAGATCAAA+TGG | + | chr4_2:23184821-23184840 | None:intergenic | 35.0% | |
| TTGATCTACTCTTCTTACCA+CGG | - | chr4_2:23184822-23184841 | Msa0594840:intron | 35.0% | |
| GAAAATAGGCTTAGATGGTT+TGG | + | chr4_2:23184874-23184893 | None:intergenic | 35.0% | |
| TGGTAGAAAATAGGCTTAGA+TGG | + | chr4_2:23184879-23184898 | None:intergenic | 35.0% | |
| AGCACCTATAGTAGAAAAGT+TGG | + | chr4_2:23184899-23184918 | None:intergenic | 35.0% | |
| AGACTAGACATGATAGGATT+AGG | + | chr4_2:23184951-23184970 | None:intergenic | 35.0% | |
| AGCTGAAAGGAAAGTTCTAT+CGG | + | chr4_2:23185086-23185105 | None:intergenic | 35.0% | |
| AACTTTCCTTTCAGCTTAAG+TGG | - | chr4_2:23185090-23185109 | Msa0594840:intron | 35.0% | |
| TACATCATCGTATTCAAGCT+GGG | + | chr4_2:23185164-23185183 | None:intergenic | 35.0% | |
| !! | TTCTCCGTCATTTTGTACTA+TGG | - | chr4_2:23185197-23185216 | Msa0594840:intron | 35.0% |
| GTTACACGGTTTAGATATCT+TGG | + | chr4_2:23185225-23185244 | None:intergenic | 35.0% | |
| GATATCTAAACCGTGTAACT+TGG | - | chr4_2:23185226-23185245 | Msa0594840:intron | 35.0% | |
| TATCTAAACCGTGTAACTTG+GGG | - | chr4_2:23185228-23185247 | Msa0594840:intron | 35.0% | |
| ATATCATACCCCAAGTTACA+CGG | + | chr4_2:23185239-23185258 | None:intergenic | 35.0% | |
| ACTTCAGTAAAAGGAGAAGT+GGG | + | chr4_2:23185290-23185309 | None:intergenic | 35.0% | |
| AACTTCAGTAAAAGGAGAAG+TGG | + | chr4_2:23185291-23185310 | None:intergenic | 35.0% | |
| TAGAAACAAGACGGAGTATA+TGG | + | chr4_2:23185319-23185338 | None:intergenic | 35.0% | |
| ! | TCTGCAAAAAGCATACATCT+CGG | - | chr4_2:23185432-23185451 | Msa0594840:intron | 35.0% |
| ! | GGAGATTTTCCCATAACAAT+AGG | + | chr4_2:23185540-23185559 | None:intergenic | 35.0% |
| !! | ATCCTGGATAGCTCTAATAT+AGG | - | chr4_2:23185608-23185627 | Msa0594840:intron | 35.0% |
| !!! | ACCAATTTGGTTTTATGCCT+GGG | + | chr4_2:23185797-23185816 | None:intergenic | 35.0% |
| !!! | AACCAATTTGGTTTTATGCC+TGG | + | chr4_2:23185798-23185817 | None:intergenic | 35.0% |
| AAGAAAAGAGACTCACGTTA+CGG | + | chr4_2:23185823-23185842 | None:intergenic | 35.0% | |
| GAGTCATACCATGAAGTTAT+GGG | + | chr4_2:23185868-23185887 | None:intergenic | 35.0% | |
| TGAGTCATACCATGAAGTTA+TGG | + | chr4_2:23185869-23185888 | None:intergenic | 35.0% | |
| ACAAGATTGCGCGAATTATA+GGG | + | chr4_2:23185904-23185923 | None:intergenic | 35.0% | |
| TACAAGATTGCGCGAATTAT+AGG | + | chr4_2:23185905-23185924 | None:intergenic | 35.0% | |
| TCCAATCTATAAGAACAAGG+GGG | + | chr4_2:23185931-23185950 | None:intergenic | 35.0% | |
| CTCTCTTATTCTTGCTTGTT+TGG | - | chr4_2:23186145-23186164 | Msa0594840:intron | 35.0% | |
| GCACTCATAATTCACTAACT+TGG | - | chr4_2:23186254-23186273 | Msa0594840:intron | 35.0% | |
| TGCATCAGATATGGATCTAA+AGG | + | chr4_2:23186375-23186394 | None:intergenic | 35.0% | |
| ! | GGATGAGCATCTTTAAAAAG+AGG | + | chr4_2:23186485-23186504 | None:intergenic | 35.0% |
| ATATAATCAACAGGGGAACT+GGG | + | chr4_2:23186506-23186525 | None:intergenic | 35.0% | |
| TATATAATCAACAGGGGAAC+TGG | + | chr4_2:23186507-23186526 | None:intergenic | 35.0% | |
| ATGTTTGAGAAACCACAAGT+TGG | + | chr4_2:23186685-23186704 | None:intergenic | 35.0% | |
| !!! | GGCAGCATTTTAAGATTTGA+CGG | - | chr4_2:23186726-23186745 | Msa0594840:intron | 35.0% |
| !!! | CATTTTAAGATTTGACGGAC+AGG | - | chr4_2:23186731-23186750 | Msa0594840:intron | 35.0% |
| AATGTTTCCCTTGCCTATTA+AGG | + | chr4_2:23186885-23186904 | None:intergenic | 35.0% | |
| AGAAGCAAACATCAAACTCA+AGG | - | chr4_2:23187002-23187021 | Msa0594840:intron | 35.0% | |
| GTGAAGAATAATGCCCTTAT+TGG | - | chr4_2:23187561-23187580 | Msa0594840:CDS | 35.0% | |
| ! | AGCAACTTTAGCTCCAATAA+GGG | + | chr4_2:23187577-23187596 | None:intergenic | 35.0% |
| CAATCTCAATTCACAAGTCA+AGG | + | chr4_2:23187799-23187818 | None:intergenic | 35.0% | |
| ATTGGAAATGTGCAAACATG+TGG | + | chr4_2:23187997-23188016 | None:intergenic | 35.0% | |
| TTGGATGAACGAAACAAGAT+TGG | + | chr4_2:23188015-23188034 | None:intergenic | 35.0% | |
| ATGTTTCGAGGGATGTAATT+TGG | + | chr4_2:23188034-23188053 | None:intergenic | 35.0% | |
| GCCAACAAGATTGTAAATGT+TGG | + | chr4_2:23188060-23188079 | None:intergenic | 35.0% | |
| ! | GGATGGTATGATGCTTTATT+TGG | - | chr4_2:23188286-23188305 | Msa0594840:intron | 35.0% |
| !! | CTGTTGATAATTCAACACAC+TGG | - | chr4_2:23188374-23188393 | Msa0594840:intron | 35.0% |
| ATTGAGAATGTGTTCCTGTA+TGG | - | chr4_2:23188784-23188803 | Msa0594840:five_prime_UTR | 35.0% | |
| AGACATTGCATTTACCATAC+AGG | + | chr4_2:23188801-23188820 | None:intergenic | 35.0% | |
| ATGATGGTTATGACAGAGGA+TGG | - | chr4_2:23181689-23181708 | Msa0594840:three_prime_UTR | 40.0% | |
| TAAACGCCTAAATGTCCGTT+TGG | - | chr4_2:23181773-23181792 | Msa0594840:intron | 40.0% | |
| GTCAATCCAAACGGACATTT+AGG | + | chr4_2:23181782-23181801 | None:intergenic | 40.0% | |
| TCGAAGATTGTTTATCCGCA+AGG | + | chr4_2:23182054-23182073 | None:intergenic | 40.0% | |
| CATACAGGAGTTAATGCTGT+TGG | - | chr4_2:23182283-23182302 | Msa0594840:intron | 40.0% | |
| !! | TTTCTGAAGCGTTGTCACTA+GGG | - | chr4_2:23182341-23182360 | Msa0594840:intron | 40.0% |
| !! | GAAGGTATTGTGAGAGAGAA+TGG | - | chr4_2:23182536-23182555 | Msa0594840:CDS | 40.0% |
| !! | AGGTATTTCTAGTCCACCTT+CGG | - | chr4_2:23182604-23182623 | Msa0594840:intron | 40.0% |
| !!! | TCCTGCTCGTGTTATTTTTG+TGG | - | chr4_2:23182736-23182755 | Msa0594840:intron | 40.0% |
| TCCACAAAAATAACACGAGC+AGG | + | chr4_2:23182740-23182759 | None:intergenic | 40.0% | |
| AATTGGGGTGAAAAACTCCT+CGG | + | chr4_2:23182926-23182945 | None:intergenic | 40.0% | |
| !! | GCTCGCCCTTTTATTTGAAT+AGG | - | chr4_2:23183003-23183022 | Msa0594840:intron | 40.0% |
| TATTTGAATAGGTCTCAGCG+GGG | - | chr4_2:23183014-23183033 | Msa0594840:intron | 40.0% | |
| ! | CATTGAAGGCATAAGTGAGT+AGG | + | chr4_2:23183455-23183474 | None:intergenic | 40.0% |
| TTGTCTATGTTGCCTTTAGG+TGG | - | chr4_2:23183498-23183517 | Msa0594840:intron | 40.0% | |
| !!! | GACAATGTTTTTGGCTTCCA+TGG | - | chr4_2:23183555-23183574 | Msa0594840:intron | 40.0% |
| !! | GTCCCTGTATCATGTCATTT+TGG | - | chr4_2:23183631-23183650 | Msa0594840:intron | 40.0% |
| GTGTACTTCAAACTTTCTGC+AGG | - | chr4_2:23183661-23183680 | Msa0594840:intron | 40.0% | |
| ACTTCAAACTTTCTGCAGGT+TGG | - | chr4_2:23183665-23183684 | Msa0594840:intron | 40.0% | |
| GGTATACATGTCTTTGTGAC+TGG | - | chr4_2:23183686-23183705 | Msa0594840:intron | 40.0% | |
| ATACATGTCTTTGTGACTGG+TGG | - | chr4_2:23183689-23183708 | Msa0594840:intron | 40.0% | |
| TCTTTGTGACTGGTGGTATT+GGG | - | chr4_2:23183696-23183715 | Msa0594840:intron | 40.0% | |
| GAATGTTTAAGTCTCCTCTG+TGG | + | chr4_2:23183958-23183977 | None:intergenic | 40.0% | |
| GTGGAGATTTATGTGTAGTG+TGG | - | chr4_2:23184147-23184166 | Msa0594840:intron | 40.0% | |
| ! | GATTTTTCTTTGGCCAGCTA+TGG | - | chr4_2:23184342-23184361 | Msa0594840:intron | 40.0% |
| TCTGAAGATATGTCCATAGC+TGG | + | chr4_2:23184358-23184377 | None:intergenic | 40.0% | |
| TCTTCAGATATCACCGAACT+TGG | - | chr4_2:23184370-23184389 | Msa0594840:intron | 40.0% | |
| TACTGGTGTTCTTCCAAGTT+CGG | + | chr4_2:23184386-23184405 | None:intergenic | 40.0% | |
| AGTCAGGTTAAAAGAGGTAG+AGG | + | chr4_2:23184793-23184812 | None:intergenic | 40.0% | |
| ACATCATTAGAGAGAGAGTG+GGG | + | chr4_2:23184924-23184943 | None:intergenic | 40.0% | |
| GACATCATTAGAGAGAGAGT+GGG | + | chr4_2:23184925-23184944 | None:intergenic | 40.0% | |
| TGACATCATTAGAGAGAGAG+TGG | + | chr4_2:23184926-23184945 | None:intergenic | 40.0% | |
| GTGGTAAGACTAGACATGAT+AGG | + | chr4_2:23184957-23184976 | None:intergenic | 40.0% | |
| ! | AAGGTACCACTTAAGCTGAA+AGG | + | chr4_2:23185099-23185118 | None:intergenic | 40.0% |
| GTACATCATCGTATTCAAGC+TGG | + | chr4_2:23185165-23185184 | None:intergenic | 40.0% | |
| GGGTCCATAGTACAAAATGA+CGG | + | chr4_2:23185204-23185223 | None:intergenic | 40.0% | |
| ATCTCCAACTTTCACCTCTA+AGG | - | chr4_2:23185260-23185279 | Msa0594840:intron | 40.0% | |
| TCTACCTTAGAGGTGAAAGT+TGG | + | chr4_2:23185267-23185286 | None:intergenic | 40.0% | |
| !! | TACATCTCGGTGTTAACTCT+TGG | - | chr4_2:23185445-23185464 | Msa0594840:intron | 40.0% |
| TAACAATAGGACTGCACCAA+GGG | + | chr4_2:23185527-23185546 | None:intergenic | 40.0% | |
| ATAACAATAGGACTGCACCA+AGG | + | chr4_2:23185528-23185547 | None:intergenic | 40.0% | |
| TTGGTGCAGTCCTATTGTTA+TGG | - | chr4_2:23185527-23185546 | Msa0594840:intron | 40.0% | |
| TGGTGCAGTCCTATTGTTAT+GGG | - | chr4_2:23185528-23185547 | Msa0594840:intron | 40.0% | |
| GCTATCCAGGATATGTATGA+GGG | + | chr4_2:23185600-23185619 | None:intergenic | 40.0% | |
| AGCTATCCAGGATATGTATG+AGG | + | chr4_2:23185601-23185620 | None:intergenic | 40.0% | |
| TGCCTATATTAGAGCTATCC+AGG | + | chr4_2:23185613-23185632 | None:intergenic | 40.0% | |
| GCTTTCCACAAAATCTCTCT+AGG | - | chr4_2:23185657-23185676 | Msa0594840:intron | 40.0% | |
| ! | GAGTACCTAGAGAGATTTTG+TGG | + | chr4_2:23185665-23185684 | None:intergenic | 40.0% |
| !!! | AATTTGGTTTTATGCCTGGG+AGG | + | chr4_2:23185794-23185813 | None:intergenic | 40.0% |
| TCCCAGGCATAAAACCAAAT+TGG | - | chr4_2:23185793-23185812 | Msa0594840:intron | 40.0% | |
| CACGTTACGGATAACCAATT+TGG | + | chr4_2:23185810-23185829 | None:intergenic | 40.0% | |
| TACCATGAAGTTATGGGAGA+GGG | + | chr4_2:23185862-23185881 | None:intergenic | 40.0% | |
| ATACCATGAAGTTATGGGAG+AGG | + | chr4_2:23185863-23185882 | None:intergenic | 40.0% | |
| CAAGATTGCGCGAATTATAG+GGG | + | chr4_2:23185903-23185922 | None:intergenic | 40.0% | |
| TCCCCCTTGTTCTTATAGAT+TGG | - | chr4_2:23185927-23185946 | Msa0594840:intron | 40.0% | |
| AGCAAGGATGATACACCATT+TGG | + | chr4_2:23185990-23186009 | None:intergenic | 40.0% | |
| CATTTATACGCTGCTGAGAA+AGG | + | chr4_2:23186055-23186074 | None:intergenic | 40.0% | |
| GACATTGATACAGATTGGGA+TGG | - | chr4_2:23186345-23186364 | Msa0594840:intron | 40.0% | |
| TTGGGAAATTCTCCAACTTG+TGG | - | chr4_2:23186670-23186689 | Msa0594840:intron | 40.0% | |
| ! | TAAGATTTGACGGACAGGAT+TGG | - | chr4_2:23186736-23186755 | Msa0594840:intron | 40.0% |
| TTGGTCATGGCTTAATTTCC+AGG | - | chr4_2:23186823-23186842 | Msa0594840:intron | 40.0% | |
| ! | TTAAGGAAGCACACTCTTCA+GGG | + | chr4_2:23186868-23186887 | None:intergenic | 40.0% |
| ! | ATTAAGGAAGCACACTCTTC+AGG | + | chr4_2:23186869-23186888 | None:intergenic | 40.0% |
| ! | GAAGAGTGTGCTTCCTTAAT+AGG | - | chr4_2:23186869-23186888 | Msa0594840:intron | 40.0% |
| TGTGCTTCCTTAATAGGCAA+GGG | - | chr4_2:23186875-23186894 | Msa0594840:intron | 40.0% | |
| GCAAACATCAAACTCAAGGT+CGG | - | chr4_2:23187006-23187025 | Msa0594840:intron | 40.0% | |
| !! | GTCGGAAGTGGAATTTTGAT+TGG | - | chr4_2:23187024-23187043 | Msa0594840:intron | 40.0% |
| TCCTATTCCTCAAGAACAGT+CGG | - | chr4_2:23187050-23187069 | Msa0594840:CDS | 40.0% | |
| AAAAAGCCCTTGAAGAAGCA+AGG | - | chr4_2:23187103-23187122 | Msa0594840:CDS | 40.0% | |
| AGTTCACCTTGCTTCTTCAA+GGG | + | chr4_2:23187112-23187131 | None:intergenic | 40.0% | |
| AAGTTCACCTTGCTTCTTCA+AGG | + | chr4_2:23187113-23187132 | None:intergenic | 40.0% | |
| GATAGAGTAAATGCACTCAC+CGG | - | chr4_2:23187335-23187354 | Msa0594840:intron | 40.0% | |
| ! | CAGCAACTTTAGCTCCAATA+AGG | + | chr4_2:23187578-23187597 | None:intergenic | 40.0% |
| ! | GTTTTCTCTTAGCAGAGCAA+GGG | + | chr4_2:23187604-23187623 | None:intergenic | 40.0% |
| CTTGCTCTGCTAAGAGAAAA+CGG | - | chr4_2:23187603-23187622 | Msa0594840:CDS | 40.0% | |
| TGCTAAGAGAAAACGGACAA+AGG | - | chr4_2:23187610-23187629 | Msa0594840:CDS | 40.0% | |
| CAAGAGATAGAGTAGCACAT+TGG | - | chr4_2:23188428-23188447 | Msa0594840:intron | 40.0% | |
| AGTATGCATGGCTGATATGA+AGG | - | chr4_2:23188478-23188497 | Msa0594840:intron | 40.0% | |
| AGAGGAAGGAAAAGATAGAG+CGG | - | chr4_2:23188584-23188603 | Msa0594840:intron | 40.0% | |
| AATTGTTTCGTAGGAGAGAC+TGG | - | chr4_2:23188627-23188646 | Msa0594840:intron | 40.0% | |
| TTGATTGCACAGAAAGTGAG+AGG | - | chr4_2:23188685-23188704 | Msa0594840:intron | 40.0% | |
| TGATTGCACAGAAAGTGAGA+GGG | - | chr4_2:23188686-23188705 | Msa0594840:intron | 40.0% | |
| ! | TAGTCCCACTTTACTTGCTA+AGG | + | chr4_2:23188741-23188760 | None:intergenic | 40.0% |
| TTGATTCTCTTCTGTTCCGC+CGG | - | chr4_2:23181338-23181357 | Msa0594840:three_prime_UTR | 45.0% | |
| GGGTTTGATATGCAGCATAC+AGG | - | chr4_2:23182268-23182287 | Msa0594840:intron | 45.0% | |
| AGCTTCGTCGATCAATGTGA+AGG | - | chr4_2:23182306-23182325 | Msa0594840:intron | 45.0% | |
| CAATGTGAAGGTAGCTTCAG+AGG | - | chr4_2:23182318-23182337 | Msa0594840:intron | 45.0% | |
| !! | GTTTCTGAAGCGTTGTCACT+AGG | - | chr4_2:23182340-23182359 | Msa0594840:intron | 45.0% |
| CAAACTGCGAAAGAGGTTGA+AGG | - | chr4_2:23182518-23182537 | Msa0594840:intron | 45.0% | |
| TTAGATGGCGTGCCTATCAT+AGG | - | chr4_2:23182584-23182603 | Msa0594840:CDS | 45.0% | |
| TTGAATGCAAAGACCGAAGG+TGG | + | chr4_2:23182620-23182639 | None:intergenic | 45.0% | |
| CAAGCCGTCATCATTCTTCT+TGG | + | chr4_2:23182695-23182714 | None:intergenic | 45.0% | |
| AGCTCAGAAAACAGCTCGAA+GGG | - | chr4_2:23183071-23183090 | Msa0594840:CDS | 45.0% | |
| TAGTCGTCTAGCCAAAGAAG+TGG | - | chr4_2:23183188-23183207 | Msa0594840:intron | 45.0% | |
| GTCTTTGTGACTGGTGGTAT+TGG | - | chr4_2:23183695-23183714 | Msa0594840:intron | 45.0% | |
| CTTTGTGACTGGTGGTATTG+GGG | - | chr4_2:23183697-23183716 | Msa0594840:intron | 45.0% | |
| ! | TTTGTGACTGGTGGTATTGG+GGG | - | chr4_2:23183698-23183717 | Msa0594840:intron | 45.0% |
| GTTTAAGTCTCCTCTGTGGA+AGG | + | chr4_2:23183954-23183973 | None:intergenic | 45.0% | |
| CCAGCACATATAACTGCTAC+TGG | + | chr4_2:23184403-23184422 | None:intergenic | 45.0% | |
| CCAGTAGCAGTTATATGTGC+TGG | - | chr4_2:23184400-23184419 | Msa0594840:intron | 45.0% | |
| TCCTAGGACCCTTGAATATC+TGG | - | chr4_2:23184444-23184463 | Msa0594840:intron | 45.0% | |
| ACCAGATATTCAAGGGTCCT+AGG | + | chr4_2:23184448-23184467 | None:intergenic | 45.0% | |
| CTTGATGCTGTGAAAAAGGC+AGG | + | chr4_2:23184604-23184623 | None:intergenic | 45.0% | |
| !! | GCCTTTTTCACAGCATCAAG+TGG | - | chr4_2:23184604-23184623 | Msa0594840:intron | 45.0% |
| GCCACTTGATGCTGTGAAAA+AGG | + | chr4_2:23184608-23184627 | None:intergenic | 45.0% | |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr4_2:23184652-23184671 | Msa0594840:intron | 45.0% |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr4_2:23184653-23184672 | Msa0594840:intron | 45.0% |
| GAGGAGAGTCAGGTTAAAAG+AGG | + | chr4_2:23184799-23184818 | None:intergenic | 45.0% | |
| AGATCAAATGGAGGAGAGTC+AGG | + | chr4_2:23184809-23184828 | None:intergenic | 45.0% | |
| CATCATTAGAGAGAGAGTGG+GGG | + | chr4_2:23184923-23184942 | None:intergenic | 45.0% | |
| CGAGAGTAAAGTAAGCGTAG+CGG | + | chr4_2:23185004-23185023 | None:intergenic | 45.0% | |
| CGCTTACTTTACTCTCGTGT+TGG | - | chr4_2:23185007-23185026 | Msa0594840:intron | 45.0% | |
| ! | GTTGTATGGTACGGAGTGTT+GGG | + | chr4_2:23185043-23185062 | None:intergenic | 45.0% |
| TGTTGTATGGTACGGAGTGT+TGG | + | chr4_2:23185044-23185063 | None:intergenic | 45.0% | |
| TCCGTACCATACAACATTGC+CGG | - | chr4_2:23185048-23185067 | Msa0594840:intron | 45.0% | |
| ACCGGCAATGTTGTATGGTA+CGG | + | chr4_2:23185052-23185071 | None:intergenic | 45.0% | |
| AGGTGTGTTGTGCGATAAGA+AGG | + | chr4_2:23185118-23185137 | None:intergenic | 45.0% | |
| TTGAAATGGAGAAGAGCCTC+AGG | + | chr4_2:23185138-23185157 | None:intergenic | 45.0% | |
| TTCAAGCTGGGTGGTTGAAA+TGG | + | chr4_2:23185152-23185171 | None:intergenic | 45.0% | |
| ATCATCGTATTCAAGCTGGG+TGG | + | chr4_2:23185161-23185180 | None:intergenic | 45.0% | |
| !! | ACTCCGTCTTGTTTCTACTC+AGG | - | chr4_2:23185322-23185341 | Msa0594840:intron | 45.0% |
| TAAATGGGAGGCTAGAGACT+TGG | + | chr4_2:23185377-23185396 | None:intergenic | 45.0% | |
| AGTCGAGGGAGGAGTTAAAT+GGG | + | chr4_2:23185392-23185411 | None:intergenic | 45.0% | |
| ! | GCAGATGATGTAGTCTTGCT+TGG | + | chr4_2:23185417-23185436 | None:intergenic | 45.0% |
| ! | AGAGATTTTGTGGAAAGCCC+TGG | + | chr4_2:23185655-23185674 | None:intergenic | 45.0% |
| TACCCTCTCCCATAACTTCA+TGG | - | chr4_2:23185857-23185876 | Msa0594840:intron | 45.0% | |
| ATTGGAATCAAGTGGCTGCA+AGG | - | chr4_2:23185945-23185964 | Msa0594840:intron | 45.0% | |
| GCGTATAAATGCATTCACCC+TGG | - | chr4_2:23186064-23186083 | Msa0594840:intron | 45.0% | |
| TATCAACTCGACATGGAACC+TGG | + | chr4_2:23186844-23186863 | None:intergenic | 45.0% | |
| ! | TAAGGAAGCACACTCTTCAG+GGG | + | chr4_2:23186867-23186886 | None:intergenic | 45.0% |
| GTGTGCTTCCTTAATAGGCA+AGG | - | chr4_2:23186874-23186893 | Msa0594840:intron | 45.0% | |
| ATCAAACTCAAGGTCGGAAG+TGG | - | chr4_2:23187012-23187031 | Msa0594840:intron | 45.0% | |
| GAGGATACTTGAAGCAAGTG+AGG | + | chr4_2:23187366-23187385 | None:intergenic | 45.0% | |
| ! | CGTTTTCTCTTAGCAGAGCA+AGG | + | chr4_2:23187605-23187624 | None:intergenic | 45.0% |
| ! | TCGGAGAACTAGTTTCTCTC+TGG | + | chr4_2:23187824-23187843 | None:intergenic | 45.0% |
| GAGTTACAGAACTAGGAGTG+TGG | + | chr4_2:23187945-23187964 | None:intergenic | 45.0% | |
| TTACAGCATGTGTACGGCTT+TGG | - | chr4_2:23188555-23188574 | Msa0594840:intron | 45.0% | |
| !! | GTACGGCTTTGGAAAGAAAG+AGG | - | chr4_2:23188566-23188585 | Msa0594840:intron | 45.0% |
| !! | GGCTTTGGAAAGAAAGAGGA+AGG | - | chr4_2:23188570-23188589 | Msa0594840:intron | 45.0% |
| GATTGCACAGAAAGTGAGAG+GGG | - | chr4_2:23188687-23188706 | Msa0594840:intron | 45.0% | |
| !! | ATAATAATAATTTAAGAAAA+TGG | - | chr4_2:23181491-23181510 | Msa0594840:three_prime_UTR | 5.0% |
| !! | TAATAATAATTTAAGAAAAT+GGG | - | chr4_2:23181492-23181511 | Msa0594840:three_prime_UTR | 5.0% |
| ! | ACAGATACGGACTGTGCTGT+GGG | + | chr4_2:23181374-23181393 | None:intergenic | 50.0% |
| ! | TACAGATACGGACTGTGCTG+TGG | + | chr4_2:23181375-23181394 | None:intergenic | 50.0% |
| GAAGGCGAGGCTTACAGATA+CGG | + | chr4_2:23181387-23181406 | None:intergenic | 50.0% | |
| ACTCACACGTTACACCACAC+TGG | - | chr4_2:23181467-23181486 | Msa0594840:three_prime_UTR | 50.0% | |
| ATGCAACCGTGTGTGTGTGT+TGG | - | chr4_2:23181529-23181548 | Msa0594840:three_prime_UTR | 50.0% | |
| GTAGCACCAACACACACACA+CGG | + | chr4_2:23181538-23181557 | None:intergenic | 50.0% | |
| TGACATCTTCAGCAGCCTTG+CGG | - | chr4_2:23182036-23182055 | Msa0594840:intron | 50.0% | |
| TCAGCGGGGAAGAACTTGAA+AGG | - | chr4_2:23183028-23183047 | Msa0594840:intron | 50.0% | |
| !! | CGAGCTGTTTTCTGAGCTCT+GGG | + | chr4_2:23183069-23183088 | None:intergenic | 50.0% |
| !! | TCGAGCTGTTTTCTGAGCTC+TGG | + | chr4_2:23183070-23183089 | None:intergenic | 50.0% |
| GAGCTCAGAAAACAGCTCGA+AGG | - | chr4_2:23183070-23183089 | Msa0594840:CDS | 50.0% | |
| TGTTGCCTTTAGGTGGCTAG+AGG | - | chr4_2:23183505-23183524 | Msa0594840:intron | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr4_2:23184654-23184673 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr4_2:23184651-23184670 | Msa0594840:intron | 50.0% |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr4_2:23184657-23184676 | Msa0594840:intron | 50.0% | |
| CTTCTTACCACGGCGTCTAT+TGG | - | chr4_2:23184832-23184851 | Msa0594840:intron | 50.0% | |
| AGGATGTTGCGTTGGATGAG+TGG | + | chr4_2:23184976-23184995 | None:intergenic | 50.0% | |
| ! | AAGTAAGCGTAGCGGAGATG+AGG | + | chr4_2:23184996-23185015 | None:intergenic | 50.0% |
| GTCAGACCGGCAATGTTGTA+TGG | + | chr4_2:23185057-23185076 | None:intergenic | 50.0% | |
| CTTATCGCACAACACACCTG+AGG | - | chr4_2:23185119-23185138 | Msa0594840:intron | 50.0% | |
| GAGAAGTGGGTCTACCTTAG+AGG | + | chr4_2:23185277-23185296 | None:intergenic | 50.0% | |
| CCGCCTGAGTAGAAACAAGA+CGG | + | chr4_2:23185328-23185347 | None:intergenic | 50.0% | |
| !! | CCGTCTTGTTTCTACTCAGG+CGG | - | chr4_2:23185325-23185344 | Msa0594840:intron | 50.0% |
| GCGGAAACCATACGCTTCTA+AGG | - | chr4_2:23185344-23185363 | Msa0594840:intron | 50.0% | |
| ! | AGGCAAGCCTTAGAAGCGTA+TGG | + | chr4_2:23185354-23185373 | None:intergenic | 50.0% |
| GAGTCGAGGGAGGAGTTAAA+TGG | + | chr4_2:23185393-23185412 | None:intergenic | 50.0% | |
| ! | AGTCTTGCTTGGTGAGTCGA+GGG | + | chr4_2:23185406-23185425 | None:intergenic | 50.0% |
| ! | TAGTCTTGCTTGGTGAGTCG+AGG | + | chr4_2:23185407-23185426 | None:intergenic | 50.0% |
| AAGGACTTAGGGTTGACCCT+TGG | - | chr4_2:23185508-23185527 | Msa0594840:intron | 50.0% | |
| AAGCGCCCTCATACATATCC+TGG | - | chr4_2:23185592-23185611 | Msa0594840:intron | 50.0% | |
| GAAAGCCCTGGAGAAGAAAG+GGG | + | chr4_2:23185643-23185662 | None:intergenic | 50.0% | |
| GGAAAGCCCTGGAGAAGAAA+GGG | + | chr4_2:23185644-23185663 | None:intergenic | 50.0% | |
| TGGAAAGCCCTGGAGAAGAA+AGG | + | chr4_2:23185645-23185664 | None:intergenic | 50.0% | |
| CTACTTACTTCGACGCGTGA+TGG | + | chr4_2:23185754-23185773 | None:intergenic | 50.0% | |
| CGTCATTCAAGATCCGCCAT+GGG | + | chr4_2:23186431-23186450 | None:intergenic | 50.0% | |
| ACGTCATTCAAGATCCGCCA+TGG | + | chr4_2:23186432-23186451 | None:intergenic | 50.0% | |
| !! | TCAGGGGTATCAACTCGACA+TGG | + | chr4_2:23186851-23186870 | None:intergenic | 50.0% |
| GCCGACTGTTCTTGAGGAAT+AGG | + | chr4_2:23187054-23187073 | None:intergenic | 50.0% | |
| AGAGTAAATGCACTCACCGG+AGG | - | chr4_2:23187338-23187357 | Msa0594840:intron | 50.0% | |
| ! | GAACTAGGAGTGTGGTGTGT+AGG | + | chr4_2:23187937-23187956 | None:intergenic | 50.0% |
| ! | ATACGGACTGTGCTGTGGGT+TGG | + | chr4_2:23181370-23181389 | None:intergenic | 55.0% |
| TGCCTTTAGGTGGCTAGAGG+AGG | - | chr4_2:23183508-23183527 | Msa0594840:intron | 55.0% | |
| GCCTTTAGGTGGCTAGAGGA+GGG | - | chr4_2:23183509-23183528 | Msa0594840:intron | 55.0% | |
| TCCCTCCTCTAGCCACCTAA+AGG | + | chr4_2:23183513-23183532 | None:intergenic | 55.0% | |
| TAGGTGGCTAGAGGAGGGAA+TGG | - | chr4_2:23183514-23183533 | Msa0594840:intron | 55.0% | |
| GAAAGGGGAAACGTAGCCTC+AGG | - | chr4_2:23183918-23183937 | Msa0594840:intron | 55.0% | |
| ACGTAGCCTCAGGCCAAGTT+TGG | - | chr4_2:23183928-23183947 | Msa0594840:intron | 55.0% | |
| CCTCTGTGGAAGGCCAAACT+TGG | + | chr4_2:23183944-23183963 | None:intergenic | 55.0% | |
| ! | CCAAGTTTGGCCTTCCACAG+AGG | - | chr4_2:23183941-23183960 | Msa0594840:intron | 55.0% |
| CGACCCCACTTAGTGGGATA+AGG | + | chr4_2:23184659-23184678 | None:intergenic | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr4_2:23184665-23184684 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr4_2:23184666-23184685 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr4_2:23184665-23184684 | Msa0594840:intron | 55.0% | |
| GAGAAGACCAATAGACGCCG+TGG | + | chr4_2:23184842-23184861 | None:intergenic | 55.0% | |
| CGGAGATGAGGATGTTGCGT+TGG | + | chr4_2:23184984-23185003 | None:intergenic | 55.0% | |
| !! | GTATGGTACGGAGTGTTGGG+CGG | + | chr4_2:23185040-23185059 | None:intergenic | 55.0% |
| CTATCGGACAGCAGTCAGAC+CGG | + | chr4_2:23185070-23185089 | None:intergenic | 55.0% | |
| ATGGGAGGCTAGAGACTTGG+AGG | + | chr4_2:23185374-23185393 | None:intergenic | 55.0% | |
| CGAGGGAGGAGTTAAATGGG+AGG | + | chr4_2:23185389-23185408 | None:intergenic | 55.0% | |
| TAGTGTGAGGACGCAGGATG+GGG | + | chr4_2:23185568-23185587 | None:intergenic | 55.0% | |
| CTAGTGTGAGGACGCAGGAT+GGG | + | chr4_2:23185569-23185588 | None:intergenic | 55.0% | |
| ACTAGTGTGAGGACGCAGGA+TGG | + | chr4_2:23185570-23185589 | None:intergenic | 55.0% | |
| TTCGACTAGTGTGAGGACGC+AGG | + | chr4_2:23185574-23185593 | None:intergenic | 55.0% | |
| TCCTCACCCCTTTCTTCTCC+AGG | - | chr4_2:23185634-23185653 | Msa0594840:intron | 55.0% | |
| CCTCACCCCTTTCTTCTCCA+GGG | - | chr4_2:23185635-23185654 | Msa0594840:intron | 55.0% | |
| ! | CGTGATGGAGCGATATCGGA+CGG | + | chr4_2:23185739-23185758 | None:intergenic | 55.0% |
| ! | GACGCGTGATGGAGCGATAT+CGG | + | chr4_2:23185743-23185762 | None:intergenic | 55.0% |
| TATGCCTGGGAGGTCGACTA+TGG | + | chr4_2:23185784-23185803 | None:intergenic | 55.0% | |
| TTGAGTGCACGCTCAACCCA+TGG | - | chr4_2:23186412-23186431 | Msa0594840:intron | 55.0% | |
| CCAGAAGCCGACTGTTCTTG+AGG | + | chr4_2:23187060-23187079 | None:intergenic | 55.0% | |
| ! | CCTCAAGAACAGTCGGCTTC+TGG | - | chr4_2:23187057-23187076 | Msa0594840:CDS | 55.0% |
| ! | TGAAGCAAGTGAGGCACCTC+CGG | + | chr4_2:23187357-23187376 | None:intergenic | 55.0% |
| !! | CTTGCGGTTGGAGTGTTGTC+TGG | - | chr4_2:23187755-23187774 | Msa0594840:CDS | 55.0% |
| GGAGTGTGGTGTGTAGGCAT+TGG | + | chr4_2:23187931-23187950 | None:intergenic | 55.0% | |
| AGGGCGTGCAGTTGTTGCTC+TGG | - | chr4_2:23182360-23182379 | Msa0594840:intron | 60.0% | |
| ! | GTGGTATTGGGGGAGTGCAC+AGG | - | chr4_2:23183708-23183727 | Msa0594840:intron | 60.0% |
| ! | ATTGGGGGAGTGCACAGGCA+TGG | - | chr4_2:23183713-23183732 | Msa0594840:intron | 60.0% |
| GGAAGGCCAAACTTGGCCTG+AGG | + | chr4_2:23183937-23183956 | None:intergenic | 60.0% | |
| ! | CTTGCTTGGTGAGTCGAGGG+AGG | + | chr4_2:23185403-23185422 | None:intergenic | 60.0% |
| AGGACGCAGGATGGGGATAC+CGG | + | chr4_2:23185561-23185580 | None:intergenic | 60.0% | |
| ! | AGGGCGCTTCGACTAGTGTG+AGG | + | chr4_2:23185581-23185600 | None:intergenic | 60.0% |
| CCCTGGAGAAGAAAGGGGTG+AGG | + | chr4_2:23185638-23185657 | None:intergenic | 60.0% | |
| GCTTCCATAGTCGACCTCCC+AGG | - | chr4_2:23185777-23185796 | Msa0594840:CDS | 60.0% | |
| AGTGCACGCTCAACCCATGG+CGG | - | chr4_2:23186415-23186434 | Msa0594840:CDS | 60.0% | |
| !! | TGCTGTGGGTTGGCTGCGAC+CGG | + | chr4_2:23181360-23181379 | None:intergenic | 65.0% |
| !! | TGTGGGTTGGCTGCGACCGG+CGG | + | chr4_2:23181357-23181376 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 23181300 | 23188857 | 23181300 | ID=Msa0594840;Name=Msa0594840 |
| chr4_2 | mRNA | 23181300 | 23188857 | 23181300 | ID=Msa0594840-mRNA-1;Parent=Msa0594840;Name=Msa0594840-mRNA-1;_AED=0.25;_eAED=0.28;_QI=98|0.83|0.92|1|0.66|0.61|13|415|323 |
| chr4_2 | exon | 23181300 | 23181733 | 23181300 | ID=Msa0594840-mRNA-1:exon:6308;Parent=Msa0594840-mRNA-1 |
| chr4_2 | exon | 23182526 | 23182607 | 23182526 | ID=Msa0594840-mRNA-1:exon:6307;Parent=Msa0594840-mRNA-1 |
| chr4_2 | exon | 23182780 | 23182865 | 23182780 | ID=Msa0594840-mRNA-1:exon:6306;Parent=Msa0594840-mRNA-1 |
| chr4_2 | exon | 23183033 | 23183153 | 23183033 | ID=Msa0594840-mRNA-1:exon:6305;Parent=Msa0594840-mRNA-1 |
| chr4_2 | exon | 23184044 | 23184092 | 23184044 | ID=Msa0594840-mRNA-1:exon:6304;Parent=Msa0594840-mRNA-1 |
| chr4_2 | exon | 23185692 | 23185798 | 23185692 | ID=Msa0594840-mRNA-1:exon:6303;Parent=Msa0594840-mRNA-1 |
| chr4_2 | exon | 23186414 | 23186474 | 23186414 | ID=Msa0594840-mRNA-1:exon:6302;Parent=Msa0594840-mRNA-1 |
| chr4_2 | exon | 23186581 | 23186640 | 23186581 | ID=Msa0594840-mRNA-1:exon:6301;Parent=Msa0594840-mRNA-1 |
| chr4_2 | exon | 23187050 | 23187132 | 23187050 | ID=Msa0594840-mRNA-1:exon:6300;Parent=Msa0594840-mRNA-1 |
| chr4_2 | exon | 23187552 | 23187662 | 23187552 | ID=Msa0594840-mRNA-1:exon:6299;Parent=Msa0594840-mRNA-1 |
| chr4_2 | exon | 23187754 | 23187874 | 23187754 | ID=Msa0594840-mRNA-1:exon:6298;Parent=Msa0594840-mRNA-1 |
| chr4_2 | exon | 23188051 | 23188128 | 23188051 | ID=Msa0594840-mRNA-1:exon:6297;Parent=Msa0594840-mRNA-1 |
| chr4_2 | exon | 23188766 | 23188857 | 23188766 | ID=Msa0594840-mRNA-1:exon:6296;Parent=Msa0594840-mRNA-1 |
| chr4_2 | five_prime_UTR | 23188766 | 23188857 | 23188766 | ID=Msa0594840-mRNA-1:five_prime_utr;Parent=Msa0594840-mRNA-1 |
| chr4_2 | five_prime_UTR | 23188123 | 23188128 | 23188123 | ID=Msa0594840-mRNA-1:five_prime_utr;Parent=Msa0594840-mRNA-1 |
| chr4_2 | CDS | 23188051 | 23188122 | 23188051 | ID=Msa0594840-mRNA-1:cds;Parent=Msa0594840-mRNA-1 |
| chr4_2 | CDS | 23187754 | 23187874 | 23187754 | ID=Msa0594840-mRNA-1:cds;Parent=Msa0594840-mRNA-1 |
| chr4_2 | CDS | 23187552 | 23187662 | 23187552 | ID=Msa0594840-mRNA-1:cds;Parent=Msa0594840-mRNA-1 |
| chr4_2 | CDS | 23187050 | 23187132 | 23187050 | ID=Msa0594840-mRNA-1:cds;Parent=Msa0594840-mRNA-1 |
| chr4_2 | CDS | 23186581 | 23186640 | 23186581 | ID=Msa0594840-mRNA-1:cds;Parent=Msa0594840-mRNA-1 |
| chr4_2 | CDS | 23186414 | 23186474 | 23186414 | ID=Msa0594840-mRNA-1:cds;Parent=Msa0594840-mRNA-1 |
| chr4_2 | CDS | 23185692 | 23185798 | 23185692 | ID=Msa0594840-mRNA-1:cds;Parent=Msa0594840-mRNA-1 |
| chr4_2 | CDS | 23184044 | 23184092 | 23184044 | ID=Msa0594840-mRNA-1:cds;Parent=Msa0594840-mRNA-1 |
| chr4_2 | CDS | 23183033 | 23183153 | 23183033 | ID=Msa0594840-mRNA-1:cds;Parent=Msa0594840-mRNA-1 |
| chr4_2 | CDS | 23182780 | 23182865 | 23182780 | ID=Msa0594840-mRNA-1:cds;Parent=Msa0594840-mRNA-1 |
| chr4_2 | CDS | 23182526 | 23182607 | 23182526 | ID=Msa0594840-mRNA-1:cds;Parent=Msa0594840-mRNA-1 |
| chr4_2 | CDS | 23181715 | 23181733 | 23181715 | ID=Msa0594840-mRNA-1:cds;Parent=Msa0594840-mRNA-1 |
| chr4_2 | three_prime_UTR | 23181300 | 23181714 | 23181300 | ID=Msa0594840-mRNA-1:three_prime_utr;Parent=Msa0594840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
