AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1440810

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1440810 MtrunA17_Chr8g0392301 91.743 109 9 0 5 113 875 983 2.14e-63 214
Msa1440810 MtrunA17_Chr8g0392301 75.188 133 12 2 132 243 116 248 2.39e-54 189
Msa1440810 MtrunA17_Chr8g0377481 63.889 108 32 1 5 112 855 955 6.90e-39 144
Msa1440810 MtrunA17_Chr8g0377481 45.638 149 44 3 132 243 111 259 3.33e-27 110
Msa1440810 MtrunA17_Chr3g0122391 62.037 108 33 1 5 112 913 1012 3.46e-36 136
Msa1440810 MtrunA17_Chr3g0122391 47.297 148 41 3 132 242 159 306 4.80e-28 113
Msa1440810 MtrunA17_Chr5g0447641 56.410 117 42 2 4 113 1087 1201 4.09e-34 130
Msa1440810 MtrunA17_Chr5g0447641 45.223 157 50 4 125 246 332 487 2.78e-29 116
Msa1440810 MtrunA17_Chr2g0311191 67.442 86 18 3 174 258 22 98 4.64e-26 102
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1440810 AT2G01830.5 65.909 132 23 3 132 241 193 324 3.06e-43 157
Msa1440810 AT2G01830.5 68.807 109 27 1 5 113 948 1049 2.13e-42 155
Msa1440810 AT2G01830.1 65.909 132 23 3 132 241 181 312 3.45e-43 157
Msa1440810 AT2G01830.1 68.807 109 27 1 5 113 936 1037 2.18e-42 155
Msa1440810 AT2G01830.4 65.909 132 23 3 132 241 181 312 3.45e-43 157
Msa1440810 AT2G01830.4 68.807 109 27 1 5 113 936 1037 2.18e-42 155
Msa1440810 AT2G01830.6 65.909 132 23 3 132 241 181 312 3.45e-43 157
Msa1440810 AT2G01830.6 68.807 109 27 1 5 113 936 1037 2.18e-42 155
Msa1440810 AT2G01830.3 65.909 132 23 3 132 241 181 312 3.45e-43 157
Msa1440810 AT2G01830.3 68.807 109 27 1 5 113 936 1037 2.18e-42 155
Msa1440810 AT2G01830.2 65.909 132 23 3 132 241 204 335 3.90e-43 157
Msa1440810 AT2G01830.2 68.807 109 27 1 5 113 959 1060 2.32e-42 155
Msa1440810 AT1G27320.1 63.248 117 38 2 1 112 900 1016 9.34e-42 153
Msa1440810 AT1G27320.1 43.624 149 47 3 132 243 169 317 3.43e-25 105
Msa1440810 AT5G35750.1 63.248 117 38 2 5 116 1049 1165 6.82e-41 150
Msa1440810 AT5G35750.1 48.000 150 43 3 132 246 308 457 2.08e-30 120

Find 370 sgRNAs with CRISPR-Local

Find 719 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATCTGCACCTTTCTCTTTC+TGG 0.090871 tig0029125:+24939 None:intergenic
CCTTGAGCTGTCTAGAAATT+TGG 0.120024 tig0029125:-27766 Msa1440810:five_prime_UTR
ACCTTCTTCACCTCAGTTAT+TGG 0.154797 tig0029125:+21696 None:intergenic
CATTATTAAGTTTGTACTTT+TGG 0.162606 tig0029125:-26642 Msa1440810:five_prime_UTR
TAAATTCCGTTTACCTATAT+TGG 0.165693 tig0029125:-20285 Msa1440810:CDS
ACACTGCCAGTTATGAATTT+TGG 0.177356 tig0029125:+22476 None:intergenic
AGCTACTGGTAAAGCATTTC+TGG 0.184947 tig0029125:-23288 Msa1440810:five_prime_UTR
GCTGTGCTCGTTGGCTCTTT+TGG 0.262041 tig0029125:-18485 Msa1440810:three_prime_UTR
AGCTTGCCTTCAGCAAGTTT+TGG 0.267697 tig0029125:-21013 Msa1440810:five_prime_UTR
TGAGAACCCAACAACCTAAA+AGG 0.270552 tig0029125:+19282 None:intergenic
TGAGAACCCAACAACCTAAA+AGG 0.270552 tig0029125:+23260 None:intergenic
TTGAAGCAACTCGTCGAATT+CGG 0.272691 tig0029125:-20364 Msa1440810:CDS
AGTGAGAAGGAAAGAGGTTT+TGG 0.273718 tig0029125:-23894 Msa1440810:five_prime_UTR
AATAAATTTATCGGGCCTTT+TGG 0.277715 tig0029125:-18560 Msa1440810:three_prime_UTR
TCCAATCTGAAGCTCGAAAA+TGG 0.279042 tig0029125:-28503 Msa1440810:five_prime_UTR
AGCTCTTCTGTTGTTGGGTT+GGG 0.283441 tig0029125:+19210 None:intergenic
ATTGGTTGCCATACATGATT+AGG 0.284727 tig0029125:+22760 None:intergenic
AAGAATATTGTTCTTATAGA+AGG 0.285105 tig0029125:-26345 Msa1440810:five_prime_UTR
TCTGATTAAGATTAATGTTA+TGG 0.285743 tig0029125:-22448 Msa1440810:five_prime_UTR
CTAAGCGCGAGACTAATATT+TGG 0.289326 tig0029125:-18519 Msa1440810:three_prime_UTR
AGCTGGAGATATCAAGAAAT+TGG 0.296400 tig0029125:-25257 Msa1440810:five_prime_UTR
CAAAAGTACAAACTTAATAA+TGG 0.297310 tig0029125:+26643 None:intergenic
TGAATGCTTGGATATCTATT+AGG 0.305363 tig0029125:+26114 None:intergenic
AAAACTCTTCATCAGCAATT+AGG 0.316824 tig0029125:+22016 None:intergenic
TGAAGCAACTCGTCGAATTC+GGG 0.321951 tig0029125:-20363 Msa1440810:CDS
AAGGCATGAAAATTCTATCT+TGG 0.329216 tig0029125:+21889 None:intergenic
CCATTATCTCTTTCCTATAC+AGG 0.329932 tig0029125:-24869 Msa1440810:five_prime_UTR
GTCAAAATAAATAAATTTAT+CGG 0.334602 tig0029125:-18569 Msa1440810:three_prime_UTR
GTAACAAAGCACATATAAAA+AGG 0.337845 tig0029125:-24985 Msa1440810:five_prime_UTR
CTGATTAAGATTAATGTTAT+GGG 0.339688 tig0029125:-22447 Msa1440810:five_prime_UTR
GAGTGCAGAAGTAATGTAAA+AGG 0.340817 tig0029125:-25173 Msa1440810:five_prime_UTR
GGCTTTAAACCCTCTAAAAC+TGG 0.340964 tig0029125:+21653 None:intergenic
GTGTTAGCTGGTGTTGTAAT+GGG 0.347004 tig0029125:-24109 Msa1440810:intron
GATTTCCAATGATCGGCATT+GGG 0.348809 tig0029125:+18225 None:intergenic
AGCTCTTATGTTGTTGGGTT+GGG 0.355867 tig0029125:+23188 None:intergenic
TAGAAAATAGAGGTTTATAG+AGG 0.356406 tig0029125:+26255 None:intergenic
ATCTAGACTCCGACACGTTC+CGG 0.356468 tig0029125:-18614 Msa1440810:three_prime_UTR
ATGTGCTAAACTCCGCATTC+TGG 0.359839 tig0029125:+18702 None:intergenic
CTCTGAATCTGAACAGTCTT+AGG 0.361731 tig0029125:+27858 None:intergenic
CAAGTTTGATGCTTGCTTCA+AGG 0.362213 tig0029125:-20796 Msa1440810:CDS
CTAACAACCCTCTTACTCAT+TGG 0.363261 tig0029125:-24832 Msa1440810:five_prime_UTR
TGGAAATCAAAATTTATTGA+TGG 0.364877 tig0029125:-18210 Msa1440810:three_prime_UTR
GGGAGCTTAAATTTGTAAAC+AGG 0.365651 tig0029125:+19234 None:intergenic
GGGAGCTTAAATTTGTAAAC+AGG 0.365651 tig0029125:+23212 None:intergenic
AAACATCACCTTCTTTGTAT+TGG 0.366658 tig0029125:+22742 None:intergenic
CCTCGTCGCAATGGCGGTTC+CGG 0.368561 tig0029125:-25086 Msa1440810:five_prime_UTR
TATCCGTGTATCAGTCTATA+TGG 0.368758 tig0029125:-27702 Msa1440810:five_prime_UTR
TAATGAGCTCTTATGTTGTT+GGG 0.369742 tig0029125:+23183 None:intergenic
TTAATGAGCTCTTCTGTTGT+TGG 0.370178 tig0029125:+19204 None:intergenic
CTTAGGCCACTTGTCGAATC+TGG 0.370934 tig0029125:+27875 None:intergenic
TCTAATCCTATTTGATCTCC+TGG 0.371886 tig0029125:+26074 None:intergenic
AATTTACTTGGTCAACTTGC+TGG 0.372381 tig0029125:-22817 Msa1440810:five_prime_UTR
AACTTTCAGGTTGGGTCTGC+CGG 0.373589 tig0029125:+18595 None:intergenic
TTTAAAGCCGTTGTGGTTGA+TGG 0.373929 tig0029125:-21639 Msa1440810:five_prime_UTR
TTGACTCCAACTTTCAGGTT+GGG 0.377248 tig0029125:+18587 None:intergenic
AGTCGCAAACGCCATCAATA+AGG 0.379169 tig0029125:-21556 Msa1440810:five_prime_UTR
TTATTGCATCTACAGCAAAA+TGG 0.379494 tig0029125:-23930 Msa1440810:five_prime_UTR
GATCTTCAGTGTGCGGCAAC+TGG 0.379917 tig0029125:-21176 Msa1440810:five_prime_UTR
GAAACAATGTTTACCTGTAT+AGG 0.381243 tig0029125:+24856 None:intergenic
TAATGAGCTCTTCTGTTGTT+GGG 0.382581 tig0029125:+19205 None:intergenic
GCATGACGACTTGGATTTCA+TGG 0.383364 tig0029125:-18646 Msa1440810:three_prime_UTR
TTAATGAGCTCTTATGTTGT+TGG 0.383934 tig0029125:+23182 None:intergenic
TTGGTTGCCATACATGATTA+GGG 0.384098 tig0029125:+22761 None:intergenic
CTAGTCACAGCAGCTCTAAC+AGG 0.385909 tig0029125:+21612 None:intergenic
TCAAGCTTTCCATTTGTTGC+GGG 0.386642 tig0029125:+22164 None:intergenic
ATTTAATGGACCACACACTA+TGG 0.386966 tig0029125:-26484 Msa1440810:five_prime_UTR
TTTCACTTCGCAAATTTCAT+TGG 0.387078 tig0029125:-28424 Msa1440810:five_prime_UTR
AAAGAGAGGCTTCACAGGTT+AGG 0.389296 tig0029125:-19523 Msa1440810:CDS
AAAGAGAGGCTTCACAGGTT+AGG 0.389296 tig0029125:-23506 Msa1440810:five_prime_UTR
AACTTGTTGATGCTTCAATA+TGG 0.391748 tig0029125:+26174 None:intergenic
GAAAACCCAGGAGATCAAAT+AGG 0.395401 tig0029125:-26080 Msa1440810:five_prime_UTR
GCTACAAATTCAATTAATAA+AGG 0.396305 tig0029125:+26294 None:intergenic
TCTGCTGTCATGGCCAATAT+AGG 0.397938 tig0029125:+20272 None:intergenic
GAGTCTGAAAGGAGATTAAA+CGG 0.402628 tig0029125:+28582 None:intergenic
TTATGAACAAGTCACCTAGA+TGG 0.407870 tig0029125:-21953 Msa1440810:five_prime_UTR
CTTCTGTTGTTGGGTTGGGA+GGG 0.408038 tig0029125:+19214 None:intergenic
TGAACAATTCCTTCCTCAAA+AGG 0.408776 tig0029125:+20188 None:intergenic
TGGGTAGTCTTTGTGATCAA+AGG 0.412517 tig0029125:-23874 Msa1440810:five_prime_UTR
TAAGTGCCTAGCTGAACTAA+TGG 0.413074 tig0029125:-21802 Msa1440810:five_prime_UTR
AACTCGACTTCTAGAAACTA+TGG 0.415251 tig0029125:-21852 Msa1440810:five_prime_UTR
TGTGTCGAAGACACTGGAAT+TGG 0.420012 tig0029125:-21927 Msa1440810:five_prime_UTR
CACAGAACCCAATGAGTAAG+AGG 0.421143 tig0029125:+24824 None:intergenic
GTTGCTTTGTATTCTTCTGA+TGG 0.422242 tig0029125:-23963 Msa1440810:five_prime_UTR
CTCAAGCTTTCCATTTGTTG+CGG 0.424158 tig0029125:+22163 None:intergenic
ACCGAGCCAAAATTCATAAC+TGG 0.425503 tig0029125:-22482 Msa1440810:five_prime_UTR
AACTATGGTGGTACCGGCAT+TGG 0.427397 tig0029125:-21837 Msa1440810:five_prime_UTR
TAACAACCCTCTTACTCATT+GGG 0.429622 tig0029125:-24831 Msa1440810:five_prime_UTR
TGAAATTTGCGAAGTGAAAA+CGG 0.429932 tig0029125:+28428 None:intergenic
CCAATCGGATATTGAATGCT+TGG 0.430148 tig0029125:+26102 None:intergenic
AAAACCCCAATGCCGATCAT+TGG 0.430396 tig0029125:-18230 Msa1440810:three_prime_UTR
CCTGTATAGGAAAGAGATAA+TGG 0.430433 tig0029125:+24869 None:intergenic
CTGAAGGTGGTGGAGGGGAA+AGG 0.432104 tig0029125:-25639 Msa1440810:intron
ACCGGAGCTGAAGGTGGTGG+AGG 0.432907 tig0029125:-25646 Msa1440810:intron
TTTATAAGCCGGCCACAGAT+TGG 0.433400 tig0029125:-21765 Msa1440810:five_prime_UTR
AGGCATGAAAATTCTATCTT+GGG 0.434654 tig0029125:+21890 None:intergenic
GAGCTCTTCTGTTGTTGGGT+TGG 0.436168 tig0029125:+19209 None:intergenic
AAGAGAGGCTTCACAGGTTA+GGG 0.436592 tig0029125:-19522 Msa1440810:CDS
AAGAGAGGCTTCACAGGTTA+GGG 0.436592 tig0029125:-23505 Msa1440810:five_prime_UTR
GGCTTCTACGGGTAATGTTG+TGG 0.441520 tig0029125:-18670 Msa1440810:exon
AGTGTTAGCTGGTGTTGTAA+TGG 0.441960 tig0029125:-24110 Msa1440810:intron
TTAATTGGAGGTAGTTATGT+TGG 0.442968 tig0029125:-22871 Msa1440810:intron
TTTCAACATTTAGCATGTAC+TGG 0.443851 tig0029125:-27590 Msa1440810:five_prime_UTR
TATCAGTCTATATGGTTTGT+AGG 0.444423 tig0029125:-27694 Msa1440810:five_prime_UTR
AGCGGTCCTAGCCGTATATT+CGG 0.445484 tig0029125:+23629 None:intergenic
GTTGGTGGCGATGGCGGTTG+CGG 0.446160 tig0029125:-25547 Msa1440810:five_prime_UTR
AATAGAAAGCCCGCAACAAA+TGG 0.447886 tig0029125:-22173 Msa1440810:five_prime_UTR
GCTTCTACGGGTAATGTTGT+GGG 0.449565 tig0029125:-18669 Msa1440810:exon
TCCCTTGTGGAAAATTTACT+TGG 0.449628 tig0029125:-22829 Msa1440810:five_prime_UTR
TCTTCTGTTGTTGGGTTGGG+AGG 0.450263 tig0029125:+19213 None:intergenic
GCCACCACCACCTTCAGCTC+CGG 0.450368 tig0029125:+25999 None:intergenic
TGATTTCCAATGATCGGCAT+TGG 0.452162 tig0029125:+18224 None:intergenic
CAAAGAAACAGCCTTATTGA+TGG 0.453163 tig0029125:+21545 None:intergenic
TAAGCGCGAGACTAATATTT+GGG 0.454578 tig0029125:-18518 Msa1440810:three_prime_UTR
GAAGAAGTTGTGCATACATC+TGG 0.454754 tig0029125:-22119 Msa1440810:five_prime_UTR
GGATATTCAAATGCAAGAAA+AGG 0.455195 tig0029125:-20775 Msa1440810:CDS
CATACGGGGACTGGCTTCTA+CGG 0.455310 tig0029125:-18682 Msa1440810:CDS
ACTTGAACCTTCAGCTGAAA+AGG 0.457162 tig0029125:+26200 None:intergenic
AGATGTATGCACAACTTCTT+CGG 0.457816 tig0029125:+22121 None:intergenic
TCAAAATAAATAAATTTATC+GGG 0.458085 tig0029125:-18568 Msa1440810:three_prime_UTR
TTCAAAGTTCCAAGAACAAA+CGG 0.459844 tig0029125:-24041 Msa1440810:five_prime_UTR
GGGTAGTCTTTGTGATCAAA+GGG 0.462700 tig0029125:-23873 Msa1440810:five_prime_UTR
TCCAATAACTGAGGTGAAGA+AGG 0.463469 tig0029125:-21697 Msa1440810:five_prime_UTR
TCAAAGTTCCAAGAACAAAC+GGG 0.463568 tig0029125:-24040 Msa1440810:five_prime_UTR
AATAAGGCTGTTTCTTTGTG+TGG 0.465190 tig0029125:-21540 Msa1440810:five_prime_UTR
GCAAAATCAGCACCACCCTT+TGG 0.468680 tig0029125:-19696 Msa1440810:CDS
GCAAAATCAGCACCACCCTT+TGG 0.468680 tig0029125:-24065 Msa1440810:five_prime_UTR
TCTTATGTTGTTGGGTTGGG+AGG 0.468813 tig0029125:+23191 None:intergenic
GTGACGGCCACACCTGATAT+AGG 0.469948 tig0029125:-25146 Msa1440810:five_prime_UTR
CTTATGTTGTTGGGTTGGGA+GGG 0.470141 tig0029125:+23192 None:intergenic
ATGGATGAAGTTGGTGGCGA+TGG 0.473168 tig0029125:-25556 Msa1440810:five_prime_UTR
GTCAAATAAACTTTATAAGC+CGG 0.473292 tig0029125:-21776 Msa1440810:five_prime_UTR
CTTGGAACTTTGAAGCCAAA+GGG 0.475089 tig0029125:+24050 None:intergenic
TTTGACTCCAACTTTCAGGT+TGG 0.476261 tig0029125:+18586 None:intergenic
CAGAAGTAATGTAAAAGGTA+AGG 0.479588 tig0029125:-25168 Msa1440810:five_prime_UTR
GAGCTCTTATGTTGTTGGGT+TGG 0.479818 tig0029125:+23187 None:intergenic
AACATACTGAGAGCTCCTAC+TGG 0.482031 tig0029125:-19324 Msa1440810:CDS
AGATACCATTTGAAGAGACT+TGG 0.482768 tig0029125:-21591 Msa1440810:five_prime_UTR
ACTGATCCCCTAATCATGTA+TGG 0.483235 tig0029125:-22768 Msa1440810:five_prime_UTR
AGGACCGATGGAGTTGTAGA+TGG 0.484578 tig0029125:-25616 Msa1440810:five_prime_UTR
ACTATTGCTGCTGTGCTCGT+TGG 0.485368 tig0029125:-18494 Msa1440810:three_prime_UTR
CATGGGTTTGTGGAGAGGAC+GGG 0.486989 tig0029125:-21198 Msa1440810:five_prime_UTR
AGACGAACAAACTACCAATC+TGG 0.488070 tig0029125:-24915 Msa1440810:five_prime_UTR
TCTTCGACACAGACCCATCT+AGG 0.488222 tig0029125:+21939 None:intergenic
AAAATCCGCGGTAAATGAAA+AGG 0.489053 tig0029125:+21737 None:intergenic
CGAGTTAACTCTTTGTGCAT+AGG 0.489096 tig0029125:+23578 None:intergenic
TATGAACAAGTCACCTAGAT+GGG 0.489195 tig0029125:-21952 Msa1440810:five_prime_UTR
ATAAGGCTGTTTCTTTGTGT+GGG 0.489234 tig0029125:-21539 Msa1440810:five_prime_UTR
GAGTTATCTGCCTTCACAAA+AGG 0.489687 tig0029125:+21870 None:intergenic
TTGTAGATGGTGGTGGCGAA+AGG 0.493499 tig0029125:-25603 Msa1440810:five_prime_UTR
GAGAACCCAACAACCTAAAA+GGG 0.497618 tig0029125:+19283 None:intergenic
GAGAACCCAACAACCTAAAA+GGG 0.497618 tig0029125:+23261 None:intergenic
CCGGAGCTGAAGGTGGTGGA+GGG 0.497991 tig0029125:-25645 Msa1440810:intron
GTTGAAGTTGGCGGTGGCAC+CGG 0.498250 tig0029125:-26018 Msa1440810:five_prime_UTR
GTATCCCAAGTCTCTTCAAA+TGG 0.499078 tig0029125:+21586 None:intergenic
AAGTGCCTAGCTGAACTAAT+GGG 0.499182 tig0029125:-21801 Msa1440810:five_prime_UTR
TCATGGCCAATATAGGTAAA+CGG 0.499301 tig0029125:+20279 None:intergenic
TCTGAAAATATCACGCCAAA+AGG 0.500549 tig0029125:+18545 None:intergenic
CATCTAAAATGAGTTAAAGA+TGG 0.501537 tig0029125:+18291 None:intergenic
TTCAGATTCAGAGGAAGAAG+AGG 0.501652 tig0029125:-27848 Msa1440810:five_prime_UTR
TCTTGTAACTTTGAAGCCAA+AGG 0.501836 tig0029125:+19680 None:intergenic
GAGTTCGATGCGATGGCGAA+AGG 0.502422 tig0029125:-26053 Msa1440810:five_prime_UTR
TAAGAATATCTAGAAAATAG+AGG 0.503004 tig0029125:+26245 None:intergenic
AAGCTTGAGACTTATCGAAA+TGG 0.503401 tig0029125:-22149 Msa1440810:five_prime_UTR
AATGGAAAGAGAGGCTTCAC+AGG 0.503470 tig0029125:-19528 Msa1440810:CDS
AATGGAAAGAGAGGCTTCAC+AGG 0.503470 tig0029125:-23511 Msa1440810:five_prime_UTR
GGCGGTGGCACCGGAGCTGA+AGG 0.503621 tig0029125:-26009 Msa1440810:intron
CTTGTAACTTTGAAGCCAAA+GGG 0.504290 tig0029125:+19681 None:intergenic
TACTAAAGTGAGAAGGAAAG+AGG 0.504630 tig0029125:-23900 Msa1440810:five_prime_UTR
CTAATCCTATTTGATCTCCT+GGG 0.505911 tig0029125:+26075 None:intergenic
TTAAAGCCGTTGTGGTTGAT+GGG 0.511535 tig0029125:-21638 Msa1440810:five_prime_UTR
GGCAGACCCAACCTGAAAGT+TGG 0.512293 tig0029125:-18593 Msa1440810:three_prime_UTR
ATTGGAGGTAGTTATGTTGG+AGG 0.513150 tig0029125:-22868 Msa1440810:intron
TGAGCTATCTTGATGGATGT+AGG 0.513496 tig0029125:-26755 Msa1440810:five_prime_UTR
GATGGCGGTTGCGGTGGTGT+TGG 0.513633 tig0029125:-25538 Msa1440810:five_prime_UTR
AATGCGGAGTTTAGCACATA+CGG 0.514945 tig0029125:-18698 Msa1440810:CDS
TGCACCTGTCACATTTGCTC+AGG 0.517781 tig0029125:-23475 Msa1440810:five_prime_UTR
AGTTTAGCACATACGGGGAC+TGG 0.518029 tig0029125:-18691 Msa1440810:CDS
TTAACATGGTTTAATCATTG+AGG 0.522179 tig0029125:+26858 None:intergenic
TCATGGGTTTGTGGAGAGGA+CGG 0.522273 tig0029125:-21199 Msa1440810:five_prime_UTR
ATGAAGAGTGTTTGAAATGT+GGG 0.523905 tig0029125:-20232 Msa1440810:CDS
AACACTCTTCATATGTAGCA+TGG 0.525664 tig0029125:+20243 None:intergenic
GAAGCCACTGAGAACTAGTA+TGG 0.525821 tig0029125:-21040 Msa1440810:five_prime_UTR
GGAGGGGAAAGGAGGACCGA+TGG 0.526035 tig0029125:-25628 Msa1440810:five_prime_UTR
ATAATGATAGCTAGAGCTAC+TGG 0.526297 tig0029125:-23302 Msa1440810:five_prime_UTR
TTTAAAGACAATGGAAAGAG+AGG 0.526312 tig0029125:-23520 Msa1440810:five_prime_UTR
TTCAAATGCAAGAAAAGGAC+GGG 0.526629 tig0029125:-20770 Msa1440810:intron
GGAGATGTACATGGTGGTTG+TGG 0.527779 tig0029125:-25511 Msa1440810:five_prime_UTR
GATGGAGAGGACGGCGAATG+AGG 0.528403 tig0029125:-20339 Msa1440810:CDS
GAGCTATCTTGATGGATGTA+GGG 0.529146 tig0029125:-26754 Msa1440810:five_prime_UTR
CAAATTGTAACAAATCTAGT+TGG 0.529505 tig0029125:-22415 Msa1440810:five_prime_UTR
ATGGATTACATCTGCTGTCA+TGG 0.530208 tig0029125:+20262 None:intergenic
CTATTGATATGATGTCTTGA+GGG 0.530839 tig0029125:-23431 Msa1440810:intron
AATCTAGTCCAGAAAGAGAA+AGG 0.531970 tig0029125:-24947 Msa1440810:five_prime_UTR
CCAAATTTCTAGACAGCTCA+AGG 0.532517 tig0029125:+27766 None:intergenic
CAAACTGAAGTTGAACCATC+AGG 0.532569 tig0029125:+20955 None:intergenic
AACAGGCAAGAAGAGACAGC+CGG 0.534721 tig0029125:-20989 Msa1440810:five_prime_UTR
CATCTACAGCAAAATGGATG+TGG 0.534726 tig0029125:-23924 Msa1440810:five_prime_UTR
TCAAGCACAAACCTGGTCAA+TGG 0.535029 tig0029125:+23774 None:intergenic
AAACCCTTCTGCCATTGACC+AGG 0.535215 tig0029125:-23785 Msa1440810:intron
GTTTCCTGAGCAAATGTGAC+AGG 0.535330 tig0029125:+23471 None:intergenic
TCATTCAAGCACATAGAGCC+CGG 0.535674 tig0029125:-24000 Msa1440810:five_prime_UTR
AGTCTGAGCATAGCCACGTT+GGG 0.538627 tig0029125:+22554 None:intergenic
AACTCGTCGAATTCGGGAGA+TGG 0.539466 tig0029125:-20357 Msa1440810:CDS
TGTAATCTCAAAACGCTAAG+TGG 0.539973 tig0029125:-22092 Msa1440810:five_prime_UTR
TCTTGGAACTTTGAAGCCAA+AGG 0.542220 tig0029125:+24049 None:intergenic
GGTTGCGGTGGTGTTGGCGA+TGG 0.542582 tig0029125:-25532 Msa1440810:five_prime_UTR
TGTTGTGGGGCATGACGACT+TGG 0.542613 tig0029125:-18655 Msa1440810:three_prime_UTR
TAGCTATCATTATGTTCTCT+CGG 0.543918 tig0029125:+23312 None:intergenic
TGTTTGAAATGTGGGATGGA+TGG 0.544805 tig0029125:-20224 Msa1440810:CDS
CTGTTCCCAAAACTTGCTGA+AGG 0.546763 tig0029125:+21007 None:intergenic
CGAGGACATCACGGATTTAG+CGG 0.548208 tig0029125:+25104 None:intergenic
TTGTTGGGTTCTCATCATCT+CGG 0.549046 tig0029125:-19273 Msa1440810:CDS
TTGTTGGGTTCTCATCATCT+CGG 0.549046 tig0029125:-23251 Msa1440810:five_prime_UTR
CGAGCTTCAGATTGGAAGAG+CGG 0.549147 tig0029125:+28510 None:intergenic
AGAAAATAGAGGTTTATAGA+GGG 0.552867 tig0029125:+26256 None:intergenic
ATCAGGGCAATGGATGAAGT+TGG 0.554409 tig0029125:-25565 Msa1440810:five_prime_UTR
GGAAGCTATTCGAGAAGAAG+AGG 0.554823 tig0029125:-27905 Msa1440810:intron
GTTAACAACTCTTTGTGCAT+AGG 0.556014 tig0029125:+19598 None:intergenic
GAGAAAGATTCATGGGTTTG+TGG 0.557247 tig0029125:-21208 Msa1440810:five_prime_UTR
GAGCTCATTAAAGCGACCAC+AGG 0.557353 tig0029125:-23170 Msa1440810:five_prime_UTR
CTATGCACAAAGAGTTAACT+CGG 0.558471 tig0029125:-23577 Msa1440810:five_prime_UTR
AGGTACTTCCAATCTGTGGC+CGG 0.558714 tig0029125:+21757 None:intergenic
TGTTGGAGGATCCTTTGATG+TGG 0.558720 tig0029125:-22854 Msa1440810:five_prime_UTR
CAGAGAAGAGAGCTAAAGAT+CGG 0.559209 tig0029125:+28459 None:intergenic
AGATTCATGGGTTTGTGGAG+AGG 0.561266 tig0029125:-21203 Msa1440810:five_prime_UTR
TATGGCAACCAATACAAAGA+AGG 0.561778 tig0029125:-22750 Msa1440810:intron
CCAAGCATTCAATATCCGAT+TGG 0.562018 tig0029125:-26102 Msa1440810:five_prime_UTR
TAGGCCACTCCACTCGGTAG+CGG 0.563486 tig0029125:+19617 None:intergenic
TAGGCCACTCCACTCGGTAG+CGG 0.563486 tig0029125:+23597 None:intergenic
GATACCATTTGAAGAGACTT+GGG 0.564437 tig0029125:-21590 Msa1440810:five_prime_UTR
ATACGGGGACTGGCTTCTAC+GGG 0.565321 tig0029125:-18681 Msa1440810:CDS
ACTGATACTCAAACCAATGC+CGG 0.566091 tig0029125:+21824 None:intergenic
TATGAAGAGTGTTTGAAATG+TGG 0.566182 tig0029125:-20233 Msa1440810:CDS
CGGAGCTGAAGGTGGTGGAG+GGG 0.566193 tig0029125:-25644 Msa1440810:intron
TCTAGAAACTATGGTGGTAC+CGG 0.567665 tig0029125:-21843 Msa1440810:five_prime_UTR
AGTCTGAAAGGAGATTAAAC+GGG 0.569635 tig0029125:+28583 None:intergenic
ATGACGGATGGTGTTGAAGT+TGG 0.569733 tig0029125:-26030 Msa1440810:five_prime_UTR
TGTGCATAGGCCACTCCACT+CGG 0.569929 tig0029125:+19611 None:intergenic
TGTGCATAGGCCACTCCACT+CGG 0.569929 tig0029125:+23591 None:intergenic
ATGGTGGTGGCGAAAGGAGA+AGG 0.570011 tig0029125:-25597 Msa1440810:five_prime_UTR
ACGGATGGTGTTGAAGTTGG+CGG 0.570486 tig0029125:-26027 Msa1440810:five_prime_UTR
TACTAATATTCGTAGCAAGA+AGG 0.570683 tig0029125:+21115 None:intergenic
ACAGGCAAGAAGAGACAGCC+GGG 0.572058 tig0029125:-20988 Msa1440810:five_prime_UTR
CTTTGATGTGGAGTCCCTTG+TGG 0.572959 tig0029125:-22842 Msa1440810:five_prime_UTR
CACAAGGGACTCCACATCAA+AGG 0.573882 tig0029125:+22843 None:intergenic
CCGTGATGTCCTCGTCGCAA+TGG 0.574492 tig0029125:-25095 Msa1440810:five_prime_UTR
GGTGGCGATGGCGGTTGCGG+TGG 0.575133 tig0029125:-25544 Msa1440810:five_prime_UTR
AGGATTAGAGTTCGATGCGA+TGG 0.575134 tig0029125:-26060 Msa1440810:five_prime_UTR
TATAAAGACAATGGAAAGAG+AGG 0.575171 tig0029125:-19537 Msa1440810:CDS
TAGAGGGTTTAAAGCCGTTG+TGG 0.575392 tig0029125:-21646 Msa1440810:five_prime_UTR
ATGCGGAGTTTAGCACATAC+GGG 0.576002 tig0029125:-18697 Msa1440810:CDS
GCAGAAGGGTTTCTGTAGGA+TGG 0.576930 tig0029125:+23796 None:intergenic
GACTGCTCAAGCGTGTGGGA+AGG 0.578235 tig0029125:-22535 Msa1440810:five_prime_UTR
CTCAGACTGCTCAAGCGTGT+GGG 0.579543 tig0029125:-22539 Msa1440810:five_prime_UTR
CTAAGACTGTTCAGATTCAG+AGG 0.581573 tig0029125:-27857 Msa1440810:five_prime_UTR
TAGAGTGGTTATAAAGACAA+TGG 0.582498 tig0029125:-19546 Msa1440810:CDS
TATTGTTCTTATAGAAGGTG+AGG 0.583167 tig0029125:-26340 Msa1440810:five_prime_UTR
CAAACCTGGTCAATGGCAGA+AGG 0.584600 tig0029125:+23781 None:intergenic
AAGGTGGTGGAGGGGAAAGG+AGG 0.586200 tig0029125:-25636 Msa1440810:five_prime_UTR
CGAATGGTGAATGTAGTGAA+AGG 0.586436 tig0029125:-20313 Msa1440810:CDS
ATAACTGAAACTAAATCGAT+CGG 0.586558 tig0029125:+25054 None:intergenic
TTGGGTCTGCCGGAACGTGT+CGG 0.588603 tig0029125:+18605 None:intergenic
CGGCTAGGACCGCTTTCGAA+AGG 0.588844 tig0029125:-19640 Msa1440810:CDS
CGGTAGCGGCCTTTCGAAAG+CGG 0.589335 tig0029125:+19631 None:intergenic
CGGTAGCGGCCTTTCGAAAG+CGG 0.589335 tig0029125:+23611 None:intergenic
TGGGTCTGTGTCGAAGACAC+TGG 0.590108 tig0029125:-21933 Msa1440810:five_prime_UTR
CCACTGAGAACTAGTATGGT+GGG 0.590558 tig0029125:-21036 Msa1440810:five_prime_UTR
CAATGGAGAAAGAGTCTGAA+AGG 0.590894 tig0029125:+28571 None:intergenic
GCTCAGACTGCTCAAGCGTG+TGG 0.592158 tig0029125:-22540 Msa1440810:five_prime_UTR
AGCAAGCATCAAACTTGTGA+GGG 0.592861 tig0029125:+20802 None:intergenic
AATCGATCGGAGAGTTCTAC+CGG 0.594959 tig0029125:+25067 None:intergenic
GTTTGAGAAGCAGCATAGAG+TGG 0.595646 tig0029125:-23544 Msa1440810:five_prime_UTR
ATGCGATGGCGAAAGGATGA+CGG 0.597203 tig0029125:-26046 Msa1440810:five_prime_UTR
ATTCAAATGCAAGAAAAGGA+CGG 0.597672 tig0029125:-20771 Msa1440810:CDS
GAACACAGTTGAAACCAGAT+TGG 0.599444 tig0029125:+24901 None:intergenic
ACACTATGGCATGATAGAGT+TGG 0.601658 tig0029125:-26470 Msa1440810:five_prime_UTR
GCTGTCTAGAAATTTGGATG+TGG 0.601699 tig0029125:-27760 Msa1440810:five_prime_UTR
GTCGAATTCGGGAGATGGAG+AGG 0.601823 tig0029125:-20352 Msa1440810:CDS
CTTGAGACTTATCGAAATGG+AGG 0.602255 tig0029125:-22146 Msa1440810:five_prime_UTR
GTTTGAGAAGCAGCATAGAG+TGG 0.605018 tig0029125:-19561 Msa1440810:CDS
ATCTTGATGGATGTAGGGAA+AGG 0.606230 tig0029125:-26749 Msa1440810:five_prime_UTR
CTCTATCATGCCATAGTGTG+TGG 0.606806 tig0029125:+26474 None:intergenic
GCCACTGAGAACTAGTATGG+TGG 0.607785 tig0029125:-21037 Msa1440810:five_prime_UTR
GATTTAGCGGAGGCTTTGTG+CGG 0.608415 tig0029125:+25117 None:intergenic
ATTTGACCAGATTCGACAAG+TGG 0.608851 tig0029125:-27881 Msa1440810:five_prime_UTR
TTAAACCCTCTAAAACTGGA+TGG 0.609462 tig0029125:+21657 None:intergenic
CCGGGAAAAGAGATGCCTGA+TGG 0.609734 tig0029125:-20970 Msa1440810:five_prime_UTR
ACCACCATCTACAACTCCAT+CGG 0.611181 tig0029125:+25612 None:intergenic
AGGGCAATGGATGAAGTTGG+TGG 0.612947 tig0029125:-25562 Msa1440810:five_prime_UTR
AAGCAAGCATCAAACTTGTG+AGG 0.613257 tig0029125:+20801 None:intergenic
CAGTCTGAGCATAGCCACGT+TGG 0.613747 tig0029125:+22553 None:intergenic
TTTATAGAGGGAATCACGCG+TGG 0.614222 tig0029125:+26268 None:intergenic
TAGAGTTGGTGTGTGAATGT+AGG 0.614643 tig0029125:-26456 Msa1440810:five_prime_UTR
ATATAGACTGATACACGGAT+AGG 0.615163 tig0029125:+27704 None:intergenic
GATGGAGTTGTAGATGGTGG+TGG 0.615734 tig0029125:-25610 Msa1440810:five_prime_UTR
GTAGCAAGAAGGATCATTCG+AGG 0.616557 tig0029125:+21126 None:intergenic
TGATGTCCTCGTCGCAATGG+CGG 0.616829 tig0029125:-25092 Msa1440810:five_prime_UTR
CACTGTATCACTAAAACATG+CGG 0.616849 tig0029125:+21068 None:intergenic
CTTCTACGGGTAATGTTGTG+GGG 0.617417 tig0029125:-18668 Msa1440810:exon
ACATACTGAGAGCTCCTACT+GGG 0.618378 tig0029125:-19323 Msa1440810:CDS
TCTATTGATATGATGTCTTG+AGG 0.618511 tig0029125:-23432 Msa1440810:five_prime_UTR
CATGGTTTGATCAGTCTGCA+AGG 0.618845 tig0029125:+26820 None:intergenic
AGCTCATTAAAGCGACCACA+GGG 0.619676 tig0029125:-23169 Msa1440810:intron
ATGTCAATGGAAGTGACTGC+AGG 0.620608 tig0029125:-20897 Msa1440810:CDS
TTCGAAAGGCCGCTACCGAG+TGG 0.621158 tig0029125:-19626 Msa1440810:CDS
TTCGAAAGGCCGCTACCGAG+TGG 0.621158 tig0029125:-23606 Msa1440810:five_prime_UTR
ATTTCCAATGATCGGCATTG+GGG 0.621764 tig0029125:+18226 None:intergenic
GATGGTGTTGAAGTTGGCGG+TGG 0.623232 tig0029125:-26024 Msa1440810:five_prime_UTR
TGGTTGCCATACATGATTAG+GGG 0.623830 tig0029125:+22762 None:intergenic
AGAGTGTTTGAAATGTGGGA+TGG 0.624246 tig0029125:-20228 Msa1440810:CDS
TGCACAAAGAGTTGTTAACT+CGG 0.624623 tig0029125:-19594 Msa1440810:CDS
ATGTGGATACTAAAGTGAGA+AGG 0.624715 tig0029125:-23907 Msa1440810:five_prime_UTR
GAAGCTATTCGAGAAGAAGA+GGG 0.626506 tig0029125:-27904 Msa1440810:intron
AATGGCAGAAGGGTTTCTGT+AGG 0.630365 tig0029125:+23792 None:intergenic
ACTCTTCATCAGCAATTAGG+TGG 0.632287 tig0029125:+22019 None:intergenic
AATATCCGATTGGAAAACCC+AGG 0.633825 tig0029125:-26092 Msa1440810:five_prime_UTR
ATGGCAATTGAAGCTCGTTG+AGG 0.635193 tig0029125:-28484 Msa1440810:five_prime_UTR
GGTTAGGGATGAGTATGCAC+CGG 0.635635 tig0029125:-19507 Msa1440810:intron
GATGAAGTTGGTGGCGATGG+CGG 0.635723 tig0029125:-25553 Msa1440810:five_prime_UTR
AAACCTGGTCAATGGCAGAA+GGG 0.635904 tig0029125:+23782 None:intergenic
CGGCTAGGACCGCTTTCGAA+AGG 0.636060 tig0029125:-23620 Msa1440810:five_prime_UTR
TAATGTAAAAGGTAAGGTGA+CGG 0.636801 tig0029125:-25162 Msa1440810:five_prime_UTR
AAGGCCGCTACCGAGTGGAG+TGG 0.637244 tig0029125:-19621 Msa1440810:CDS
AAGGCCGCTACCGAGTGGAG+TGG 0.637244 tig0029125:-23601 Msa1440810:five_prime_UTR
CAAAATGATGAAGAATAGCA+AGG 0.637826 tig0029125:+18361 None:intergenic
AATTCGGGAGATGGAGAGGA+CGG 0.638289 tig0029125:-20348 Msa1440810:CDS
GCTTGGATATCTATTAGGCA+TGG 0.639413 tig0029125:+26119 None:intergenic
GGAACTTTGAAGCCAAAGGG+TGG 0.640019 tig0029125:+24053 None:intergenic
GAGTTAACTCGGAAAGAAAG+CGG 0.640585 tig0029125:-23566 Msa1440810:five_prime_UTR
TTGTTAACTCGGAAAGAGAG+CGG 0.640754 tig0029125:-19583 Msa1440810:CDS
AACAACCTAAAAGGGCTAGT+CGG 0.642277 tig0029125:+19291 None:intergenic
GGGTTCTCATCATCTCGGTG+TGG 0.642737 tig0029125:-19268 Msa1440810:CDS
GGGTTCTCATCATCTCGGTG+TGG 0.642737 tig0029125:-23246 Msa1440810:five_prime_UTR
AAAATGGTGCTTCCAGCACA+GGG 0.643044 tig0029125:-21515 Msa1440810:intron
GACCGCCCATTAGTTCAGCT+AGG 0.643366 tig0029125:+21796 None:intergenic
CGTAAATATTCCAAAATCCG+CGG 0.647005 tig0029125:+21725 None:intergenic
GTAACTTTGAAGCCAAAGGG+TGG 0.650789 tig0029125:+19684 None:intergenic
GAAGTTGTGCATACATCTGG+CGG 0.651844 tig0029125:-22116 Msa1440810:five_prime_UTR
AGTCAATAACACAATTAACA+TGG 0.652172 tig0029125:+26802 None:intergenic
CCATTGCGACGAGGACATCA+CGG 0.652805 tig0029125:+25095 None:intergenic
TGCGGCAACTGGAAACAGAA+CGG 0.653414 tig0029125:-21165 Msa1440810:five_prime_UTR
ACGGCGAATGAGGAGACGAA+TGG 0.653590 tig0029125:-20329 Msa1440810:CDS
GCGAGATATTAGAAAAGCTG+AGG 0.654014 tig0029125:-25489 Msa1440810:five_prime_UTR
ATAATGCAGTTCAATAAGCG+AGG 0.657195 tig0029125:-22227 Msa1440810:intron
ACATCATATCAATAGACTCA+AGG 0.658508 tig0029125:+23439 None:intergenic
GTCGGAACAAACTTCCCAGT+AGG 0.660421 tig0029125:+19309 None:intergenic
AGGACGGGATCTTCAGTGTG+CGG 0.664290 tig0029125:-21183 Msa1440810:five_prime_UTR
GAAAAGGTACTTCCAATCTG+TGG 0.664912 tig0029125:+21753 None:intergenic
CCGGAACCGCCATTGCGACG+AGG 0.668033 tig0029125:+25086 None:intergenic
GTTGGCGATGGAGATGTACA+TGG 0.668187 tig0029125:-25520 Msa1440810:five_prime_UTR
GATGTGAAGTGTGCAGACAG+CGG 0.669637 tig0029125:-20852 Msa1440810:CDS
ACAGAACCCAATGAGTAAGA+GGG 0.670609 tig0029125:+24825 None:intergenic
TCAGTTTGAAGCCTTCTGTG+CGG 0.678971 tig0029125:-20940 Msa1440810:five_prime_UTR
TCGACTTCTAGAAACTATGG+TGG 0.680954 tig0029125:-21849 Msa1440810:five_prime_UTR
GGACATCACGGATTTAGCGG+AGG 0.683899 tig0029125:+25107 None:intergenic
CAAAGTTCCAAGAACAAACG+GGG 0.685277 tig0029125:-24039 Msa1440810:five_prime_UTR
TTATAGAGGGAATCACGCGT+GGG 0.688730 tig0029125:+26269 None:intergenic
TACGAAGAATCCAATAACTG+AGG 0.689869 tig0029125:-21706 Msa1440810:five_prime_UTR
ACCGATGGAGTTGTAGATGG+TGG 0.690749 tig0029125:-25613 Msa1440810:five_prime_UTR
GGATGGCTAGAGCATGAACA+TGG 0.693348 tig0029125:+23813 None:intergenic
TGTCAGGGAAACATTGCTGA+AGG 0.696155 tig0029125:-18751 Msa1440810:intron
TGCCTAGCTGAACTAATGGG+CGG 0.697388 tig0029125:-21798 Msa1440810:five_prime_UTR
AGGTTTCCCATCAACCACAA+CGG 0.697501 tig0029125:+21632 None:intergenic
ACAAATGCAATCATTCAACA+AGG 0.705448 tig0029125:+26697 None:intergenic
AAACCATATAGACTGATACA+CGG 0.717551 tig0029125:+27699 None:intergenic
TGCGGAGTTTAGCACATACG+GGG 0.722432 tig0029125:-18696 Msa1440810:CDS
CCCACCATACTAGTTCTCAG+TGG 0.729319 tig0029125:+21036 None:intergenic
GAATTGAACTCAACCCAACG+TGG 0.736332 tig0029125:-22567 Msa1440810:five_prime_UTR
GATGGCGAAAGGATGACGGA+TGG 0.756508 tig0029125:-26042 Msa1440810:five_prime_UTR
GGCGATGGAGATGTACATGG+TGG 0.786952 tig0029125:-25517 Msa1440810:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTAATTTTTTTTTTTTT+TGG - tig0029125:26061-26080 Msa1440810:five_prime_UTR 0.0%
!!! TGATTAATTAACTTTTTAAT+TGG - tig0029125:23904-23923 Msa1440810:five_prime_UTR 10.0%
!! ATTAAATGAGTTAAAATATT+TGG - tig0029125:25522-25541 Msa1440810:five_prime_UTR 10.0%
!! GTCAAAATAAATAAATTTAT+CGG - tig0029125:28221-28240 Msa1440810:intron 10.0%
!! TCAAAATAAATAAATTTATC+GGG - tig0029125:28222-28241 Msa1440810:intron 10.0%
!!! ACACAAAGTTTTTTATATAT+AGG + tig0029125:22585-22604 None:intergenic 15.0%
!!! TTAATTAACTTTTTAATTGG+AGG - tig0029125:23907-23926 Msa1440810:five_prime_UTR 15.0%
!!! TTTTTAGTGAATTAAAGTTA+AGG - tig0029125:25339-25358 Msa1440810:intron 15.0%
!!! ATAAAAGTATCTGAAATTTT+AGG - tig0029125:26892-26911 Msa1440810:intron 15.0%
!! ATCACTATCATTTATTAAAA+TGG + tig0029125:27966-27985 None:intergenic 15.0%
!! AAAAACTTCAGTTATTTATT+TGG + tig0029125:28380-28399 None:intergenic 15.0%
!! AATTGAATATAGAATCCTTA+GGG + tig0029125:18504-18523 None:intergenic 20.0%
!! ACTTATTTGAACTTATTTAG+TGG - tig0029125:18669-18688 Msa1440810:exon 20.0%
!!! AAGTTTTTACACAATTAACA+TGG + tig0029125:19291-19310 None:intergenic 20.0%
!! AAAAATTCAGAGAATTTCAA+TGG + tig0029125:19790-19809 None:intergenic 20.0%
!! ATAAAAGGAAATTGAGTTTA+TGG + tig0029125:19832-19851 None:intergenic 20.0%
!!! AAGTTTTAACACAATTAACA+TGG + tig0029125:19949-19968 None:intergenic 20.0%
!!! CAAAAGTACAAACTTAATAA+TGG + tig0029125:20150-20169 None:intergenic 20.0%
!!! CATTATTAAGTTTGTACTTT+TGG - tig0029125:20148-20167 Msa1440810:intron 20.0%
!! AAGAATATTGTTCTTATAGA+AGG - tig0029125:20445-20464 Msa1440810:intron 20.0%
!! GCTACAAATTCAATTAATAA+AGG + tig0029125:20499-20518 None:intergenic 20.0%
!! TAAGAATATCTAGAAAATAG+AGG + tig0029125:20548-20567 None:intergenic 20.0%
!! TCATTAAAATGCACAAATAT+TGG - tig0029125:22134-22153 Msa1440810:five_prime_UTR 20.0%
!! CAATAAAAAAAGGAAAGAAA+GGG + tig0029125:22265-22284 None:intergenic 20.0%
!! ACAATAAAAAAAGGAAAGAA+AGG + tig0029125:22266-22285 None:intergenic 20.0%
!! GAAAATTCGACAATAAAAAA+AGG + tig0029125:22275-22294 None:intergenic 20.0%
!!! TTTCTGTGTAATTTTTGAAA+TGG - tig0029125:22291-22310 Msa1440810:intron 20.0%
!!! CTGTTAATTGAGTATTTTTT+GGG - tig0029125:22606-22625 Msa1440810:intron 20.0%
!! TCTGATTAAGATTAATGTTA+TGG - tig0029125:24342-24361 Msa1440810:intron 20.0%
!! CTGATTAAGATTAATGTTAT+GGG - tig0029125:24343-24362 Msa1440810:intron 20.0%
!! TTAGTAATGCAAATAACTTA+GGG + tig0029125:24441-24460 None:intergenic 20.0%
!! ATTAGTAATGCAAATAACTT+AGG + tig0029125:24442-24461 None:intergenic 20.0%
!! CAATGTCATTAATTACAAAA+AGG + tig0029125:25316-25335 None:intergenic 20.0%
!! TCTCAACAAAAATAATATCA+GGG + tig0029125:25566-25585 None:intergenic 20.0%
!! TTCTCAACAAAAATAATATC+AGG + tig0029125:25567-25586 None:intergenic 20.0%
!!! TTTCTGTGTAATTTTTGAAA+TGG - tig0029125:22291-22310 Msa1440810:intron 20.0%
!!! ACTGTTAATTGAGTATTTTT+TGG - tig0029125:26971-26990 Msa1440810:intron 20.0%
!!! CTGTTAATTGAGTATTTTTT+GGG - tig0029125:22606-22625 Msa1440810:intron 20.0%
!! TGTGTTTAGTATAAAAATCT+TGG - tig0029125:27707-27726 Msa1440810:five_prime_UTR 20.0%
!! GTGTTTAGTATAAAAATCTT+GGG - tig0029125:27708-27727 Msa1440810:five_prime_UTR 20.0%
!!! AACTGAAGTTTTTTAAGTAA+CGG - tig0029125:28387-28406 Msa1440810:five_prime_UTR 20.0%
!!! AAATTTTGATTTCCAATGAT+CGG + tig0029125:28575-28594 None:intergenic 20.0%
!! TGGAAATCAAAATTTATTGA+TGG - tig0029125:28580-28599 Msa1440810:five_prime_UTR 20.0%
! CAATTGAATATAGAATCCTT+AGG + tig0029125:18505-18524 None:intergenic 25.0%
! CATGATACAAAAACAGAATT+TGG + tig0029125:18560-18579 None:intergenic 25.0%
! ATCAAATCTAATGTCCTTAT+TGG - tig0029125:18847-18866 Msa1440810:intron 25.0%
! TTAACATGGTTTAATCATTG+AGG + tig0029125:19277-19296 None:intergenic 25.0%
! TATTTAGCAATTGATCTGTA+TGG + tig0029125:19333-19352 None:intergenic 25.0%
! TACAGATCAATTGCTAAATA+TGG - tig0029125:19333-19352 Msa1440810:CDS 25.0%
!! ATACTTCTAAAGAAAACACT+TGG + tig0029125:19376-19395 None:intergenic 25.0%
! AAAAACTACCAAAGGAAATA+AGG + tig0029125:19439-19458 None:intergenic 25.0%
!!! TATTTCCTTTGGTAGTTTTT+TGG - tig0029125:19439-19458 Msa1440810:intron 25.0%
! TTAAACCAAAAAACTACCAA+AGG + tig0029125:19447-19466 None:intergenic 25.0%
! AAATTTGTACTACTTTGCTA+TGG - tig0029125:19639-19658 Msa1440810:CDS 25.0%
! ATTATCACTAAGTGAATCAT+TGG + tig0029125:19666-19685 None:intergenic 25.0%
! TCAATTTCCTGATTTAATTG+AGG + tig0029125:19761-19780 None:intergenic 25.0%
! ATGTTGAAATGCTAGATAAA+AGG + tig0029125:19847-19866 None:intergenic 25.0%
! TTAACATGGTTTAATCATTG+AGG + tig0029125:19277-19296 None:intergenic 25.0%
! AGTCAATAACACAATTAACA+TGG + tig0029125:19991-20010 None:intergenic 25.0%
!!! TGTGTTATTGACTATGTTTT+TGG - tig0029125:19998-20017 Msa1440810:intron 25.0%
! AGCAAACGACAAAAATTTAA+TGG - tig0029125:20292-20311 Msa1440810:CDS 25.0%
!!! TAGTTGTTTTTGTGAATCAA+AGG - tig0029125:20384-20403 Msa1440810:intron 25.0%
! AGAAAATAGAGGTTTATAGA+GGG + tig0029125:20537-20556 None:intergenic 25.0%
! TAGAAAATAGAGGTTTATAG+AGG + tig0029125:20538-20557 None:intergenic 25.0%
! TGAAAATACAATTAGTGTGA+TGG + tig0029125:21481-21500 None:intergenic 25.0%
! ATAACTGAAACTAAATCGAT+CGG + tig0029125:21739-21758 None:intergenic 25.0%
! GTAACAAAGCACATATAAAA+AGG - tig0029125:21805-21824 Msa1440810:five_prime_UTR 25.0%
!!! GTGTTTTTTAAGTCAATGTT+TGG - tig0029125:22002-22021 Msa1440810:five_prime_UTR 25.0%
! AGAGAGAGAATTAAAAAGAA+GGG + tig0029125:22240-22259 None:intergenic 25.0%
! AAGAGAGAGAATTAAAAAGA+AGG + tig0029125:22241-22260 None:intergenic 25.0%
!!! GATACTTTACTTTTATCTGA+TGG + tig0029125:22517-22536 None:intergenic 25.0%
!!! AGTAAAGTATCTGAGATTTT+AGG - tig0029125:22526-22545 Msa1440810:five_prime_UTR 25.0%
!!! GCTGTTAATTGAGTATTTTT+TGG - tig0029125:22605-22624 Msa1440810:intron 25.0%
! TATGTTTCATGAGTAATTAG+AGG - tig0029125:23696-23715 Msa1440810:intron 25.0%
! GTGTTTGGTATAAAAATCTT+AGG - tig0029125:23728-23747 Msa1440810:intron 25.0%
! CAAATTGTAACAAATCTAGT+TGG - tig0029125:24375-24394 Msa1440810:intron 25.0%
! TACTAATATGCATGTTATGT+TGG - tig0029125:24455-24474 Msa1440810:intron 25.0%
! TTGTTCATAAAAATCATTCG+AGG + tig0029125:24827-24846 None:intergenic 25.0%
! GTCAAATAAACTTTATAAGC+CGG - tig0029125:25014-25033 Msa1440810:five_prime_UTR 25.0%
! TGAGTTAAAATATTTGGTTG+TGG - tig0029125:25528-25547 Msa1440810:five_prime_UTR 25.0%
!! TTTTTGTTGAGAAAGATTCA+TGG - tig0029125:25574-25593 Msa1440810:five_prime_UTR 25.0%
!! TTTTGTTGAGAAAGATTCAT+GGG - tig0029125:25575-25594 Msa1440810:five_prime_UTR 25.0%
!!! AGTTTTTTCTAAATCAGCAA+AGG + tig0029125:26113-26132 None:intergenic 25.0%
! TATCATTGAATTTATCAGCA+AGG + tig0029125:26169-26188 None:intergenic 25.0%
! ACAAACATAACATGTATAGA+GGG + tig0029125:26335-26354 None:intergenic 25.0%
! AACAAACATAACATGTATAG+AGG + tig0029125:26336-26355 None:intergenic 25.0%
!! CATGTACTTACATTATTTTC+AGG - tig0029125:26402-26421 Msa1440810:five_prime_UTR 25.0%
! TAAATTCCGTTTACCTATAT+TGG - tig0029125:26505-26524 Msa1440810:five_prime_UTR 25.0%
!!! TTGTTTTGTATGAGCATATA+TGG - tig0029125:26645-26664 Msa1440810:five_prime_UTR 25.0%
!! TGTATTAGTTAGTATTGAAC+TGG - tig0029125:26677-26696 Msa1440810:five_prime_UTR 25.0%
! AATAAAGAGAAAAGTGACAA+AGG + tig0029125:26730-26749 None:intergenic 25.0%
!!! GCACGAACTTTTTTATATAT+AGG + tig0029125:26951-26970 None:intergenic 25.0%
! TGTTTCATATGAGTAATTAG+AGG - tig0029125:27676-27695 Msa1440810:five_prime_UTR 25.0%
!!! TGATGTTTCTTTTTTATGTC+TGG - tig0029125:27860-27879 Msa1440810:five_prime_UTR 25.0%
!! CTGAATGTTGACATTTTTAT+TGG - tig0029125:28016-28035 Msa1440810:intron 25.0%
!!! GTACTTAATTTTTCAGCTAT+AGG + tig0029125:28469-28488 None:intergenic 25.0%
!! CATCTAAAATGAGTTAAAGA+TGG + tig0029125:28502-28521 None:intergenic 25.0%
!! CATCTTTAACTCATTTTAGA+TGG - tig0029125:28500-28519 Msa1440810:five_prime_UTR 25.0%
TGAAATTTGCGAAGTGAAAA+CGG + tig0029125:18365-18384 None:intergenic 30.0%
TTTCACTTCGCAAATTTCAT+TGG - tig0029125:18366-18385 Msa1440810:three_prime_UTR 30.0%
!! TATCTGATATTTGCTATCTC+AGG - tig0029125:18623-18642 Msa1440810:three_prime_UTR 30.0%
TAAACTGAAACAATCCAAAC+AGG + tig0029125:18650-18669 None:intergenic 30.0%
!! TAGTGGAATAAGTTTTGTAG+TGG - tig0029125:18686-18705 Msa1440810:CDS 30.0%
! TGACTTATTTGACTTATCTC+AGG - tig0029125:18715-18734 Msa1440810:CDS 30.0%
! GACTTATTTGACTTATCTCA+GGG - tig0029125:18716-18735 Msa1440810:CDS 30.0%
AACACCAATCAAAACAAAAC+AGG + tig0029125:18742-18761 None:intergenic 30.0%
!! AATGTCCTTATTGGTTGTTT+TGG - tig0029125:18856-18875 Msa1440810:intron 30.0%
TTCATCCAAAACAACCAATA+AGG + tig0029125:18864-18883 None:intergenic 30.0%
!!! TATTGGTTGTTTTGGATGAA+TGG - tig0029125:18864-18883 Msa1440810:intron 30.0%
AAACCATATAGACTGATACA+CGG + tig0029125:19094-19113 None:intergenic 30.0%
! TATCAGTCTATATGGTTTGT+AGG - tig0029125:19096-19115 Msa1440810:intron 30.0%
TTTCAACATTTAGCATGTAC+TGG - tig0029125:19200-19219 Msa1440810:intron 30.0%
! ATACCATACCTTATTTCCTT+TGG - tig0029125:19428-19447 Msa1440810:intron 30.0%
TGCAACTTTATCAGCTTAAA+AGG + tig0029125:19523-19542 None:intergenic 30.0%
! TTTTAAGCTGATAAAGTTGC+AGG - tig0029125:19522-19541 Msa1440810:CDS 30.0%
TGATTTAATTGAGGCAATGT+TGG + tig0029125:19752-19771 None:intergenic 30.0%
AACATTGCCTCAATTAAATC+AGG - tig0029125:19751-19770 Msa1440810:intron 30.0%
TTTCAACATTTAGCATGTAC+TGG - tig0029125:19200-19219 Msa1440810:intron 30.0%
ACAAATGCAATCATTCAACA+AGG + tig0029125:20096-20115 None:intergenic 30.0%
TATTGTTCTTATAGAAGGTG+AGG - tig0029125:20450-20469 Msa1440810:intron 30.0%
!! AACTTGTTGATGCTTCAATA+TGG + tig0029125:20619-20638 None:intergenic 30.0%
TGAATGCTTGGATATCTATT+AGG + tig0029125:20679-20698 None:intergenic 30.0%
GAGAAAGTCCAAAAGAATTA+GGG - tig0029125:21035-21054 Msa1440810:five_prime_UTR 30.0%
TCTATTATGCATTTGACACA+CGG - tig0029125:21372-21391 Msa1440810:intron 30.0%
TCGTTTGTCAGAAAAAAATG+TGG - tig0029125:21503-21522 Msa1440810:intron 30.0%
CAGAAGTAATGTAAAAGGTA+AGG - tig0029125:21622-21641 Msa1440810:five_prime_UTR 30.0%
TAATGTAAAAGGTAAGGTGA+CGG - tig0029125:21628-21647 Msa1440810:five_prime_UTR 30.0%
GAAACAATGTTTACCTGTAT+AGG + tig0029125:21937-21956 None:intergenic 30.0%
! TTTTGTCTTTAAGCAAAGAC+TGG - tig0029125:22068-22087 Msa1440810:five_prime_UTR 30.0%
TATGAAGAGTTCAGAGAAAT+AGG - tig0029125:22640-22659 Msa1440810:intron 30.0%
TTCAAAGTTCCAAGAACAAA+CGG - tig0029125:22749-22768 Msa1440810:intron 30.0%
TTATTGCATCTACAGCAAAA+TGG - tig0029125:22860-22879 Msa1440810:five_prime_UTR 30.0%
!!! ATGTTTTGATCATTCTGTGT+TGG - tig0029125:23039-23058 Msa1440810:intron 30.0%
CATACATAAAGTTTCCTGAA+GGG + tig0029125:23125-23144 None:intergenic 30.0%
!!! TAGAGTGGTTTTAAAGACAA+TGG - tig0029125:23261-23280 Msa1440810:five_prime_UTR 30.0%
TTTAAAGACAATGGAAAGAG+AGG - tig0029125:23270-23289 Msa1440810:five_prime_UTR 30.0%
ACATCATATCAATAGACTCA+AGG + tig0029125:23354-23373 None:intergenic 30.0%
TCTATTGATATGATGTCTTG+AGG - tig0029125:23358-23377 Msa1440810:intron 30.0%
CTATTGATATGATGTCTTGA+GGG - tig0029125:23359-23378 Msa1440810:intron 30.0%
ATTAAAAACAAGCAGTGGAA+TGG + tig0029125:23405-23424 None:intergenic 30.0%
!! ATTTCTCATTTTTGCAATGC+AGG - tig0029125:23451-23470 Msa1440810:five_prime_UTR 30.0%
TAGCTATCATTATGTTCTCT+CGG + tig0029125:23481-23500 None:intergenic 30.0%
TAATGAGCTCTTATGTTGTT+GGG + tig0029125:23610-23629 None:intergenic 30.0%
TTAATGAGCTCTTATGTTGT+TGG + tig0029125:23611-23630 None:intergenic 30.0%
TGTGTCAATAACACTAATAG+TGG + tig0029125:23797-23816 None:intergenic 30.0%
!! AGTAAACTGTTTCTGTTACA+AGG - tig0029125:23836-23855 Msa1440810:five_prime_UTR 30.0%
TTAATTGGAGGTAGTTATGT+TGG - tig0029125:23919-23938 Msa1440810:five_prime_UTR 30.0%
! ACCAAGTAAATTTTCCACAA+GGG + tig0029125:23965-23984 None:intergenic 30.0%
AAACATCACCTTCTTTGTAT+TGG + tig0029125:24051-24070 None:intergenic 30.0%
CCAAAAACAAGTTACATTCA+TGG + tig0029125:24081-24100 None:intergenic 30.0%
!!! CCATGAATGTAACTTGTTTT+TGG - tig0029125:24078-24097 Msa1440810:five_prime_UTR 30.0%
AAAACTCTTCATCAGCAATT+AGG + tig0029125:24777-24796 None:intergenic 30.0%
AGGCATGAAAATTCTATCTT+GGG + tig0029125:24903-24922 None:intergenic 30.0%
AAGGCATGAAAATTCTATCT+TGG + tig0029125:24904-24923 None:intergenic 30.0%
! AATTTTCATGCCTTTTGTGA+AGG - tig0029125:24910-24929 Msa1440810:five_prime_UTR 30.0%
TTAAAATATTTGGTTGTGGC+AGG - tig0029125:25532-25551 Msa1440810:five_prime_UTR 30.0%
CAACAAAAATAATATCAGGG+TGG + tig0029125:25563-25582 None:intergenic 30.0%
TACTAATATTCGTAGCAAGA+AGG + tig0029125:25678-25697 None:intergenic 30.0%
!! ATTTTAGTGGTTGATGTCAA+TGG - tig0029125:25880-25899 Msa1440810:intron 30.0%
GGATATTCAAATGCAAGAAA+AGG - tig0029125:26015-26034 Msa1440810:five_prime_UTR 30.0%
ATTCAAATGCAAGAAAAGGA+CGG - tig0029125:26019-26038 Msa1440810:five_prime_UTR 30.0%
!! TATGAAGAGTGTTTGAAATG+TGG - tig0029125:26557-26576 Msa1440810:five_prime_UTR 30.0%
!! ATGAAGAGTGTTTGAAATGT+GGG - tig0029125:26558-26577 Msa1440810:five_prime_UTR 30.0%
! TTATGTCTCAAAACCTTTTG+AGG - tig0029125:26589-26608 Msa1440810:five_prime_UTR 30.0%
! ATTAGTTAGTATTGAACTGG+TGG - tig0029125:26680-26699 Msa1440810:five_prime_UTR 30.0%
!!! TAGTCTAAGATGTTTTGGTT+TGG - tig0029125:26791-26810 Msa1440810:five_prime_UTR 30.0%
! TTTCAGATACTTTTATCTGC+TGG + tig0029125:26888-26907 None:intergenic 30.0%
TGAACTCTTCTTCATATCTA+TGG + tig0029125:27002-27021 None:intergenic 30.0%
GAAAGAGATTTAGTGTTAGT+TGG - tig0029125:27038-27057 Msa1440810:intron 30.0%
! AGAAACTTTTGCAGAATATG+CGG - tig0029125:27130-27149 Msa1440810:intron 30.0%
TAGAGTGGTTATAAAGACAA+TGG - tig0029125:27244-27263 Msa1440810:intron 30.0%
TATAAAGACAATGGAAAGAG+AGG - tig0029125:27253-27272 Msa1440810:intron 30.0%
AATAAAAACAAGCAGAGGAA+TGG + tig0029125:27387-27406 None:intergenic 30.0%
!! ATTTCTCATTTTTGCAATGC+AGG - tig0029125:23451-23470 Msa1440810:five_prime_UTR 30.0%
AGCTGAAACATAGTGAAATA+AGG + tig0029125:27630-27649 None:intergenic 30.0%
TATGAGTAATTAGAGGATGA+AGG - tig0029125:27683-27702 Msa1440810:five_prime_UTR 30.0%
!! TTGACATTTTTATTGGTGTC+AGG - tig0029125:28023-28042 Msa1440810:intron 30.0%
!!! TGACATTTTTATTGGTGTCA+GGG - tig0029125:28024-28043 Msa1440810:intron 30.0%
!! ACTTTTAACCGACTTTTTGA+TGG - tig0029125:28065-28084 Msa1440810:intron 30.0%
!!! TTATTTTGACTCCAACTTTC+AGG + tig0029125:28211-28230 None:intergenic 30.0%
! AATAAATTTATCGGGCCTTT+TGG - tig0029125:28230-28249 Msa1440810:intron 30.0%
!!! AGACTCGTTATTTTTCAACT+TGG - tig0029125:28332-28351 Msa1440810:intron 30.0%
!!! GACTCGTTATTTTTCAACTT+GGG - tig0029125:28333-28352 Msa1440810:intron 30.0%
CAAAATGATGAAGAATAGCA+AGG + tig0029125:28432-28451 None:intergenic 30.0%
! GCTATTCTTCATCATTTTGT+AGG - tig0029125:28433-28452 Msa1440810:five_prime_UTR 30.0%
AGTCTGAAAGGAGATTAAAC+GGG + tig0029125:18210-18229 None:intergenic 35.0%
GAGTCTGAAAGGAGATTAAA+CGG + tig0029125:18211-18230 None:intergenic 35.0%
TTGTGTCTGAAAAATCGCAA+TGG + tig0029125:18239-18258 None:intergenic 35.0%
GAGAAAAAAGGAGCTTCAAT+CGG + tig0029125:18397-18416 None:intergenic 35.0%
TTGCAGAGAAGAGAGAAAAA+AGG + tig0029125:18409-18428 None:intergenic 35.0%
TGCTTCGAAAACTCTTGATT+AGG - tig0029125:18463-18482 Msa1440810:three_prime_UTR 35.0%
GCTTCGAAAACTCTTGATTA+GGG - tig0029125:18464-18483 Msa1440810:three_prime_UTR 35.0%
GTTTATACTCTCAAACCCTA+AGG - tig0029125:18486-18505 Msa1440810:three_prime_UTR 35.0%
TTTGTGCTCACTGCTAAAAT+GGG + tig0029125:18791-18810 None:intergenic 35.0%
! TTTTGTGCTCACTGCTAAAA+TGG + tig0029125:18792-18811 None:intergenic 35.0%
ATATAGACTGATACACGGAT+AGG + tig0029125:19089-19108 None:intergenic 35.0%
TATCCGTGTATCAGTCTATA+TGG - tig0029125:19088-19107 Msa1440810:intron 35.0%
TATGGTTTAATCAGTCTGCA+GGG + tig0029125:19315-19334 None:intergenic 35.0%
CTACCAAAGGAAATAAGGTA+TGG + tig0029125:19434-19453 None:intergenic 35.0%
GAAGCATGACATTATTGACA+TGG + tig0029125:19697-19716 None:intergenic 35.0%
! GTTTTCATGAGCTATCTTGA+TGG - tig0029125:20028-20047 Msa1440810:intron 35.0%
! TTCTAAGTGTGACACGTTTT+TGG + tig0029125:20248-20267 None:intergenic 35.0%
! ATTTAATGGACCACACACTA+TGG - tig0029125:20306-20325 Msa1440810:CDS 35.0%
CTAATCCTATTTGATCTCCT+GGG + tig0029125:20718-20737 None:intergenic 35.0%
TCTAATCCTATTTGATCTCC+TGG + tig0029125:20719-20738 None:intergenic 35.0%
GAGAAGGTCCAAAAGAATTA+GGG - tig0029125:20855-20874 Msa1440810:CDS 35.0%
! AACAATGGCCCTAATTCTTT+TGG + tig0029125:20866-20885 None:intergenic 35.0%
GGAGAAAGTCCAAAAGAATT+AGG - tig0029125:21034-21053 Msa1440810:five_prime_UTR 35.0%
GAGAAGGTCAAAAAGAATCA+GGG - tig0029125:21209-21228 Msa1440810:five_prime_UTR 35.0%
AAAAATGTGGAGAAACAAGC+TGG - tig0029125:21516-21535 Msa1440810:five_prime_UTR 35.0%
AGCTGGAGATATCAAGAAAT+TGG - tig0029125:21533-21552 Msa1440810:five_prime_UTR 35.0%
GAGTGCAGAAGTAATGTAAA+AGG - tig0029125:21617-21636 Msa1440810:five_prime_UTR 35.0%
AATCTAGTCCAGAAAGAGAA+AGG - tig0029125:21843-21862 Msa1440810:five_prime_UTR 35.0%
CCTGTATAGGAAAGAGATAA+TGG + tig0029125:21924-21943 None:intergenic 35.0%
CCATTATCTCTTTCCTATAC+AGG - tig0029125:21921-21940 Msa1440810:five_prime_UTR 35.0%
TAACAACCCTCTTACTCATT+GGG - tig0029125:21959-21978 Msa1440810:five_prime_UTR 35.0%
! AAATATTGGCTGTTGAGAGA+AGG - tig0029125:22148-22167 Msa1440810:five_prime_UTR 35.0%
! AATATTGGCTGTTGAGAGAA+GGG - tig0029125:22149-22168 Msa1440810:five_prime_UTR 35.0%
CAAGCTTATGTCTCAAAAGA+TGG + tig0029125:22208-22227 None:intergenic 35.0%
CCAAACATGATGAATGATTG+AGG + tig0029125:22361-22380 None:intergenic 35.0%
CCTCAATCATTCATCATGTT+TGG - tig0029125:22358-22377 Msa1440810:intron 35.0%
! TCTTGTTTCCTAAGACTCTT+AGG - tig0029125:22401-22420 Msa1440810:intron 35.0%
CTCTGAACTCTTCATATCTA+TGG + tig0029125:22636-22655 None:intergenic 35.0%
GAAAGAGATTTAGTGTTAGC+TGG - tig0029125:22669-22688 Msa1440810:intron 35.0%
TCAAAGTTCCAAGAACAAAC+GGG - tig0029125:22750-22769 Msa1440810:intron 35.0%
CAACAAAAATTTGAGAAGCC+GGG + tig0029125:22811-22830 None:intergenic 35.0%
GCAACAAAAATTTGAGAAGC+CGG + tig0029125:22812-22831 None:intergenic 35.0%
! GTTGCTTTGTATTCTTCTGA+TGG - tig0029125:22827-22846 Msa1440810:five_prime_UTR 35.0%
ATGTGGATACTAAAGTGAGA+AGG - tig0029125:22883-22902 Msa1440810:intron 35.0%
TACTAAAGTGAGAAGGAAAG+AGG - tig0029125:22890-22909 Msa1440810:intron 35.0%
AAAACATTCAAGCACAAACC+TGG + tig0029125:23026-23045 None:intergenic 35.0%
! TGCTTTTATGATTTCCCTTC+AGG - tig0029125:23108-23127 Msa1440810:intron 35.0%
GCATACATAAAGTTTCCTGA+AGG + tig0029125:23126-23145 None:intergenic 35.0%
GGAAACTTTATGTATGCTTC+AGG - tig0029125:23129-23148 Msa1440810:intron 35.0%
! GGAAACTTTTGCCGAATATA+CGG - tig0029125:23150-23169 Msa1440810:intron 35.0%
CTATGCACAAAGAGTTAACT+CGG - tig0029125:23213-23232 Msa1440810:five_prime_UTR 35.0%
CCACAATTAAAAACAAGCAG+TGG + tig0029125:23410-23429 None:intergenic 35.0%
!!! CCACTGCTTGTTTTTAATTG+TGG - tig0029125:23407-23426 Msa1440810:intron 35.0%
!!! CTGCTTGTTTTTAATTGTGG+AGG - tig0029125:23410-23429 Msa1440810:intron 35.0%
GGGAGCTTAAATTTGTAAAC+AGG + tig0029125:23581-23600 None:intergenic 35.0%
TGAAATAAGGATATACCCTG+TGG + tig0029125:23639-23658 None:intergenic 35.0%
CATGAGTAATTAGAGGATGA+AGG - tig0029125:23703-23722 Msa1440810:intron 35.0%
! AACACTAATAGTGGCATTGA+CGG + tig0029125:23788-23807 None:intergenic 35.0%
TCTGTTACAAGGCTTGTATT+TGG - tig0029125:23847-23866 Msa1440810:five_prime_UTR 35.0%
TCCCTTGTGGAAAATTTACT+TGG - tig0029125:23961-23980 Msa1440810:five_prime_UTR 35.0%
! GACCAAGTAAATTTTCCACA+AGG + tig0029125:23966-23985 None:intergenic 35.0%
AATTTACTTGGTCAACTTGC+TGG - tig0029125:23973-23992 Msa1440810:five_prime_UTR 35.0%
TTGGTTGCCATACATGATTA+GGG + tig0029125:24032-24051 None:intergenic 35.0%
ATTGGTTGCCATACATGATT+AGG + tig0029125:24033-24052 None:intergenic 35.0%
TATGGCAACCAATACAAAGA+AGG - tig0029125:24040-24059 Msa1440810:five_prime_UTR 35.0%
GGAAACATCAAATGACATGT+AGG - tig0029125:24112-24131 Msa1440810:intron 35.0%
ACATCAAATGACATGTAGGT+AGG - tig0029125:24116-24135 Msa1440810:intron 35.0%
! GCTACTGTCATTACATTTTC+TGG - tig0029125:24147-24166 Msa1440810:intron 35.0%
!!! CATTTTCTGGAACTGACTTT+CGG - tig0029125:24160-24179 Msa1440810:intron 35.0%
! ACACTGCCAGTTATGAATTT+TGG + tig0029125:24317-24336 None:intergenic 35.0%
! AACAGCAAAAGTGTACTTGA+AGG + tig0029125:24500-24519 None:intergenic 35.0%
ATAATGCAGTTCAATAAGCG+AGG - tig0029125:24563-24582 Msa1440810:intron 35.0%
AAGCTTGAGACTTATCGAAA+TGG - tig0029125:24641-24660 Msa1440810:intron 35.0%
AGATGTATGCACAACTTCTT+CGG + tig0029125:24672-24691 None:intergenic 35.0%
TGTAATCTCAAAACGCTAAG+TGG - tig0029125:24698-24717 Msa1440810:intron 35.0%
CGATGCTTCAACTAAAAAAG+TGG - tig0029125:24801-24820 Msa1440810:five_prime_UTR 35.0%
TTATGAACAAGTCACCTAGA+TGG - tig0029125:24837-24856 Msa1440810:five_prime_UTR 35.0%
TATGAACAAGTCACCTAGAT+GGG - tig0029125:24838-24857 Msa1440810:five_prime_UTR 35.0%
! AACTCGACTTCTAGAAACTA+TGG - tig0029125:24938-24957 Msa1440810:five_prime_UTR 35.0%
! AAGTACCTTTTCATTTACCG+CGG - tig0029125:25048-25067 Msa1440810:five_prime_UTR 35.0%
AAAATCCGCGGTAAATGAAA+AGG + tig0029125:25056-25075 None:intergenic 35.0%
! TTTTCATTTACCGCGGATTT+TGG - tig0029125:25055-25074 Msa1440810:five_prime_UTR 35.0%
CGTAAATATTCCAAAATCCG+CGG + tig0029125:25068-25087 None:intergenic 35.0%
TACGAAGAATCCAATAACTG+AGG - tig0029125:25084-25103 Msa1440810:five_prime_UTR 35.0%
!!! ATCTACCATCCAGTTTTAGA+GGG - tig0029125:25128-25147 Msa1440810:five_prime_UTR 35.0%
!! TTAAACCCTCTAAAACTGGA+TGG + tig0029125:25136-25155 None:intergenic 35.0%
AGATACCATTTGAAGAGACT+TGG - tig0029125:25199-25218 Msa1440810:five_prime_UTR 35.0%
GATACCATTTGAAGAGACTT+GGG - tig0029125:25200-25219 Msa1440810:five_prime_UTR 35.0%
!! CAAAGAAACAGCCTTATTGA+TGG + tig0029125:25248-25267 None:intergenic 35.0%
!! AATAAGGCTGTTTCTTTGTG+TGG - tig0029125:25250-25269 Msa1440810:five_prime_UTR 35.0%
!! ATAAGGCTGTTTCTTTGTGT+GGG - tig0029125:25251-25270 Msa1440810:five_prime_UTR 35.0%
GTTTCTTTGTGTGGGAAAAA+TGG - tig0029125:25259-25278 Msa1440810:five_prime_UTR 35.0%
ATTAAAAACTTACCCTGTGC+TGG + tig0029125:25290-25309 None:intergenic 35.0%
! CATCTAAAGTCACACATGAT+CGG - tig0029125:25384-25403 Msa1440810:intron 35.0%
! TTGCATTTGTTCTTGTTGTG+TGG - tig0029125:25483-25502 Msa1440810:five_prime_UTR 35.0%
CACTGTATCACTAAAACATG+CGG + tig0029125:25725-25744 None:intergenic 35.0%
! AAATTTTCATTCCGCACAGA+AGG + tig0029125:25864-25883 None:intergenic 35.0%
! GTGCGGAATGAAAATTTTAG+TGG - tig0029125:25867-25886 Msa1440810:intron 35.0%
TTCAAATGCAAGAAAAGGAC+GGG - tig0029125:26020-26039 Msa1440810:five_prime_UTR 35.0%
TTACGTGGATTCAATTTACG+TGG + tig0029125:26193-26212 None:intergenic 35.0%
TCATGGCCAATATAGGTAAA+CGG + tig0029125:26514-26533 None:intergenic 35.0%
AACACTCTTCATATGTAGCA+TGG + tig0029125:26550-26569 None:intergenic 35.0%
TGAACAATTCCTTCCTCAAA+AGG + tig0029125:26605-26624 None:intergenic 35.0%
!! TTTTGAGGAAGGAATTGTTC+AGG - tig0029125:26604-26623 Msa1440810:five_prime_UTR 35.0%
!! GGTCTTAGTCTAAGATGTTT+TGG - tig0029125:26786-26805 Msa1440810:five_prime_UTR 35.0%
TGCTGTAATGTTACTGTACT+TGG - tig0029125:26833-26852 Msa1440810:five_prime_UTR 35.0%
GAAGAAGAGTTCAGAGAAAT+AGG - tig0029125:27009-27028 Msa1440810:intron 35.0%
!! AGTGTTAGTTGGTGTTGTAA+TGG - tig0029125:27049-27068 Msa1440810:intron 35.0%
!! GTGTTAGTTGGTGTTGTAAT+GGG - tig0029125:27050-27069 Msa1440810:intron 35.0%
!! CTTGTAACTTTGAAGCCAAA+GGG + tig0029125:27112-27131 None:intergenic 35.0%
!! TCTTGTAACTTTGAAGCCAA+AGG + tig0029125:27113-27132 None:intergenic 35.0%
GTTAACAACTCTTTGTGCAT+AGG + tig0029125:27195-27214 None:intergenic 35.0%
TGCACAAAGAGTTGTTAACT+CGG - tig0029125:27196-27215 Msa1440810:intron 35.0%
GTTTCCTAAGCAAATATGAC+CGG + tig0029125:27305-27324 None:intergenic 35.0%
ACATCGTATCAATAGACTCA+AGG + tig0029125:27335-27354 None:intergenic 35.0%
CCACAAATAAAAACAAGCAG+AGG + tig0029125:27392-27411 None:intergenic 35.0%
!!! CCTCTGCTTGTTTTTATTTG+TGG - tig0029125:27389-27408 Msa1440810:intron 35.0%
!!! CTGCTTGTTTTTATTTGTGG+AGG - tig0029125:27392-27411 Msa1440810:intron 35.0%
GGGAGCTTAAATTTGTAAAC+AGG + tig0029125:23581-23600 None:intergenic 35.0%
TAATGAGCTCTTCTGTTGTT+GGG + tig0029125:27588-27607 None:intergenic 35.0%
TTAATGAGCTCTTCTGTTGT+TGG + tig0029125:27589-27608 None:intergenic 35.0%
! AACACTAATAGTGGCATTGA+CGG + tig0029125:23788-23807 None:intergenic 35.0%
! TGTGTCGATAACACTAATAG+TGG + tig0029125:27785-27804 None:intergenic 35.0%
GTTGAAGAAAACGTTGTACT+TGG - tig0029125:27819-27838 Msa1440810:five_prime_UTR 35.0%
TACAGTCCTTGATTTCTTGA+AGG - tig0029125:27989-28008 Msa1440810:intron 35.0%
ACAGTCCTTGATTTCTTGAA+GGG - tig0029125:27990-28009 Msa1440810:intron 35.0%
AGTTACCCTTCAAGAAATCA+AGG + tig0029125:27998-28017 None:intergenic 35.0%
TCTGAAAATATCACGCCAAA+AGG + tig0029125:28248-28267 None:intergenic 35.0%
TAAGCGCGAGACTAATATTT+GGG - tig0029125:28272-28291 Msa1440810:intron 35.0%
CAATGGAGAAAGAGTCTGAA+AGG + tig0029125:18222-18241 None:intergenic 40.0%
! TCCAATCTGAAGCTCGAAAA+TGG - tig0029125:18287-18306 Msa1440810:three_prime_UTR 40.0%
CAGAGAAGAGAGCTAAAGAT+CGG + tig0029125:18334-18353 None:intergenic 40.0%
!! TAGTCGTTTTCTCTCTCACA+AGG - tig0029125:18431-18450 Msa1440810:three_prime_UTR 40.0%
!!! AGGGCCTGTTTTGTTTTGAT+TGG - tig0029125:18735-18754 Msa1440810:CDS 40.0%
GAAGCTATTCGAGAAGAAGA+GGG - tig0029125:18886-18905 Msa1440810:intron 40.0%
ATTTGACCAGATTCGACAAG+TGG - tig0029125:18909-18928 Msa1440810:intron 40.0%
CTCTGAATCTGAACAGTCTT+AGG + tig0029125:18935-18954 None:intergenic 40.0%
CTAAGACTGTTCAGATTCAG+AGG - tig0029125:18933-18952 Msa1440810:intron 40.0%
TTCAGATTCAGAGGAAGAAG+AGG - tig0029125:18942-18961 Msa1440810:intron 40.0%
!!! AGAAGAGGATTTTGAAGCAG+AGG - tig0029125:18957-18976 Msa1440810:intron 40.0%
!!! GATTTTGAAGCAGAGGTTGA+AGG - tig0029125:18964-18983 Msa1440810:intron 40.0%
! CCAAATTTCTAGACAGCTCA+AGG + tig0029125:19027-19046 None:intergenic 40.0%
CCTTGAGCTGTCTAGAAATT+TGG - tig0029125:19024-19043 Msa1440810:intron 40.0%
GCTGTCTAGAAATTTGGATG+TGG - tig0029125:19030-19049 Msa1440810:intron 40.0%
GTATGGTTTAATCAGTCTGC+AGG + tig0029125:19316-19335 None:intergenic 40.0%
! TGAGCTATCTTGATGGATGT+AGG - tig0029125:20035-20054 Msa1440810:intron 40.0%
! GAGCTATCTTGATGGATGTA+GGG - tig0029125:20036-20055 Msa1440810:intron 40.0%
! ATCTTGATGGATGTAGGGAA+AGG - tig0029125:20041-20060 Msa1440810:intron 40.0%
ACACTATGGCATGATAGAGT+TGG - tig0029125:20320-20339 Msa1440810:CDS 40.0%
!! TAGAGTTGGTGTGTGAATGT+AGG - tig0029125:20334-20353 Msa1440810:CDS 40.0%
! AACACTACCTTTTCAGCTGA+AGG - tig0029125:20583-20602 Msa1440810:intron 40.0%
ACTTGAACCTTCAGCTGAAA+AGG + tig0029125:20593-20612 None:intergenic 40.0%
ATGGTCTCAGCGAAAAAGAA+AGG + tig0029125:20655-20674 None:intergenic 40.0%
GCTTGGATATCTATTAGGCA+TGG + tig0029125:20674-20693 None:intergenic 40.0%
CCAATCGGATATTGAATGCT+TGG + tig0029125:20691-20710 None:intergenic 40.0%
CCAAGCATTCAATATCCGAT+TGG - tig0029125:20688-20707 Msa1440810:intron 40.0%
AATATCCGATTGGAAAACCC+AGG - tig0029125:20698-20717 Msa1440810:intron 40.0%
GAAAACCCAGGAGATCAAAT+AGG - tig0029125:20710-20729 Msa1440810:intron 40.0%
ACCACCACCTACTACAATAT+CGG + tig0029125:20827-20846 None:intergenic 40.0%
! ATATTGTAGTAGGTGGTGGT+GGG - tig0029125:20827-20846 Msa1440810:CDS 40.0%
GGAGAAGGTCCAAAAGAATT+AGG - tig0029125:20854-20873 Msa1440810:CDS 40.0%
ATTAGGGCCATTGTTGAAGT+TGG - tig0029125:20871-20890 Msa1440810:CDS 40.0%
!! TAGATGGTGGTGGAGAAATA+AGG - tig0029125:20914-20933 Msa1440810:exon 40.0%
! AACCATGGCCCTAATTCTTT+TGG + tig0029125:21046-21065 None:intergenic 40.0%
GGAGAAGGTCAAAAAGAATC+AGG - tig0029125:21208-21227 Msa1440810:five_prime_UTR 40.0%
GTCAAAAAGAATCAGGGCAA+TGG - tig0029125:21215-21234 Msa1440810:five_prime_UTR 40.0%
GCGAGATATTAGAAAAGCTG+AGG - tig0029125:21301-21320 Msa1440810:intron 40.0%
TGAAATGGAGCTATGAAGCA+CGG + tig0029125:21455-21474 None:intergenic 40.0%
TGCTTCATAGCTCCATTTCA+AGG - tig0029125:21455-21474 Msa1440810:intron 40.0%
! TTAGTGTGATGGCCTTGAAA+TGG + tig0029125:21470-21489 None:intergenic 40.0%
! GCTTTTACCTATATCAGGTG+TGG + tig0029125:21654-21673 None:intergenic 40.0%
AGACGAACAAACTACCAATC+TGG - tig0029125:21875-21894 Msa1440810:five_prime_UTR 40.0%
GAACACAGTTGAAACCAGAT+TGG + tig0029125:21892-21911 None:intergenic 40.0%
CTAACAACCCTCTTACTCAT+TGG - tig0029125:21958-21977 Msa1440810:five_prime_UTR 40.0%
ACAGAACCCAATGAGTAAGA+GGG + tig0029125:21968-21987 None:intergenic 40.0%
! ACTCTTAGGCTAAGAGGTTT+TGG - tig0029125:22415-22434 Msa1440810:five_prime_UTR 40.0%
!!! TAGGCTAAGAGGTTTTGGTT+TGG - tig0029125:22420-22439 Msa1440810:five_prime_UTR 40.0%
!! AGTGTTAGCTGGTGTTGTAA+TGG - tig0029125:22680-22699 Msa1440810:intron 40.0%
!! GTGTTAGCTGGTGTTGTAAT+GGG - tig0029125:22681-22700 Msa1440810:intron 40.0%
!! CTTGGAACTTTGAAGCCAAA+GGG + tig0029125:22743-22762 None:intergenic 40.0%
!! TCTTGGAACTTTGAAGCCAA+AGG + tig0029125:22744-22763 None:intergenic 40.0%
CAAAGTTCCAAGAACAAACG+GGG - tig0029125:22751-22770 Msa1440810:five_prime_UTR 40.0%
! TTTTGTTCCCCGTTTGTTCT+TGG + tig0029125:22761-22780 None:intergenic 40.0%
CATCTACAGCAAAATGGATG+TGG - tig0029125:22866-22885 Msa1440810:intron 40.0%
! AGTGAGAAGGAAAGAGGTTT+TGG - tig0029125:22896-22915 Msa1440810:intron 40.0%
! GTGAGAAGGAAAGAGGTTTT+GGG - tig0029125:22897-22916 Msa1440810:intron 40.0%
TGGGTAGTCTTTGTGATCAA+AGG - tig0029125:22916-22935 Msa1440810:intron 40.0%
GGGTAGTCTTTGTGATCAAA+GGG - tig0029125:22917-22936 Msa1440810:intron 40.0%
CGAGTTAACTCTTTGTGCAT+AGG + tig0029125:23215-23234 None:intergenic 40.0%
GAGTTAACTCGGAAAGAAAG+CGG - tig0029125:23224-23243 Msa1440810:five_prime_UTR 40.0%
GAGAACCCAACAACCTAAAA+GGG + tig0029125:23532-23551 None:intergenic 40.0%
TGAGAACCCAACAACCTAAA+AGG + tig0029125:23533-23552 None:intergenic 40.0%
TTGTTGGGTTCTCATCATCT+CGG - tig0029125:23539-23558 Msa1440810:five_prime_UTR 40.0%
AGCTCTTATGTTGTTGGGTT+GGG + tig0029125:23605-23624 None:intergenic 40.0%
AGCTGACACGTAGTGAAATA+AGG + tig0029125:23652-23671 None:intergenic 40.0%
ATTGGAGGTAGTTATGTTGG+AGG - tig0029125:23922-23941 Msa1440810:five_prime_UTR 40.0%
ACTGATCCCCTAATCATGTA+TGG - tig0029125:24022-24041 Msa1440810:five_prime_UTR 40.0%
TGGTTGCCATACATGATTAG+GGG + tig0029125:24031-24050 None:intergenic 40.0%
!!! TTGTTTTTGGAGATCCACAC+AGG - tig0029125:24091-24110 Msa1440810:five_prime_UTR 40.0%
GTCATTTGATGTTTCCTGTG+TGG + tig0029125:24108-24127 None:intergenic 40.0%
! GACATGTAGGTAGGTTTTTC+TGG - tig0029125:24125-24144 Msa1440810:intron 40.0%
ACCGAGCCAAAATTCATAAC+TGG - tig0029125:24308-24327 Msa1440810:intron 40.0%
!!! GCCAGTTATGAATTTTGGCT+CGG + tig0029125:24312-24331 None:intergenic 40.0%
AATAGAAAGCCCGCAACAAA+TGG - tig0029125:24617-24636 Msa1440810:intron 40.0%
! TCAAGCTTTCCATTTGTTGC+GGG + tig0029125:24629-24648 None:intergenic 40.0%
! CTCAAGCTTTCCATTTGTTG+CGG + tig0029125:24630-24649 None:intergenic 40.0%
CTTGAGACTTATCGAAATGG+AGG - tig0029125:24644-24663 Msa1440810:intron 40.0%
GAAGAAGTTGTGCATACATC+TGG - tig0029125:24671-24690 Msa1440810:intron 40.0%
ACTCTTCATCAGCAATTAGG+TGG + tig0029125:24774-24793 None:intergenic 40.0%
GAGTTATCTGCCTTCACAAA+AGG + tig0029125:24923-24942 None:intergenic 40.0%
! TCGACTTCTAGAAACTATGG+TGG - tig0029125:24941-24960 Msa1440810:five_prime_UTR 40.0%
TCTAGAAACTATGGTGGTAC+CGG - tig0029125:24947-24966 Msa1440810:five_prime_UTR 40.0%
ACTGATACTCAAACCAATGC+CGG + tig0029125:24969-24988 None:intergenic 40.0%
TAAGTGCCTAGCTGAACTAA+TGG - tig0029125:24988-25007 Msa1440810:five_prime_UTR 40.0%
AAGTGCCTAGCTGAACTAAT+GGG - tig0029125:24989-25008 Msa1440810:five_prime_UTR 40.0%
!! GAAAAGGTACTTCCAATCTG+TGG + tig0029125:25040-25059 None:intergenic 40.0%
TCCAATAACTGAGGTGAAGA+AGG - tig0029125:25093-25112 Msa1440810:five_prime_UTR 40.0%
ACCTTCTTCACCTCAGTTAT+TGG + tig0029125:25097-25116 None:intergenic 40.0%
!! GATCTACCATCCAGTTTTAG+AGG - tig0029125:25127-25146 Msa1440810:five_prime_UTR 40.0%
!! GGCTTTAAACCCTCTAAAAC+TGG + tig0029125:25140-25159 None:intergenic 40.0%
! TTTAAAGCCGTTGTGGTTGA+TGG - tig0029125:25151-25170 Msa1440810:five_prime_UTR 40.0%
TTAAAGCCGTTGTGGTTGAT+GGG - tig0029125:25152-25171 Msa1440810:five_prime_UTR 40.0%
GTATCCCAAGTCTCTTCAAA+TGG + tig0029125:25207-25226 None:intergenic 40.0%
CGATCATGTGTGACTTTAGA+TGG + tig0029125:25386-25405 None:intergenic 40.0%
GAGAAAGATTCATGGGTTTG+TGG - tig0029125:25582-25601 Msa1440810:five_prime_UTR 40.0%
CAAACTGAAGTTGAACCATC+AGG + tig0029125:25838-25857 None:intergenic 40.0%
! TGCCTTGAAAAACTTTGGAG+CGG - tig0029125:25916-25935 Msa1440810:intron 40.0%
! ATCCGCTCCAAAGTTTTTCA+AGG + tig0029125:25921-25940 None:intergenic 40.0%
AGCAAGCATCAAACTTGTGA+GGG + tig0029125:25991-26010 None:intergenic 40.0%
AAGCAAGCATCAAACTTGTG+AGG + tig0029125:25992-26011 None:intergenic 40.0%
CAAGTTTGATGCTTGCTTCA+AGG - tig0029125:25994-26013 Msa1440810:intron 40.0%
! AATCCACGTAACTTGCATGT+TGG - tig0029125:26202-26221 Msa1440810:five_prime_UTR 40.0%
TTGAAGCAACTCGTCGAATT+CGG - tig0029125:26426-26445 Msa1440810:five_prime_UTR 40.0%
CGAATGGTGAATGTAGTGAA+AGG - tig0029125:26477-26496 Msa1440810:five_prime_UTR 40.0%
! ATGGATTACATCTGCTGTCA+TGG + tig0029125:26531-26550 None:intergenic 40.0%
! AGAGTGTTTGAAATGTGGGA+TGG - tig0029125:26562-26581 Msa1440810:five_prime_UTR 40.0%
! TGTTTGAAATGTGGGATGGA+TGG - tig0029125:26566-26585 Msa1440810:five_prime_UTR 40.0%
!! GTCTCAAAACCTTTTGAGGA+AGG - tig0029125:26593-26612 Msa1440810:five_prime_UTR 40.0%
TTGTTAACTCGGAAAGAGAG+CGG - tig0029125:27207-27226 Msa1440810:intron 40.0%
GAGTCTATTGATACGATGTC+TGG - tig0029125:27336-27355 Msa1440810:intron 40.0%
TATTGATACGATGTCTGGAG+AGG - tig0029125:27341-27360 Msa1440810:intron 40.0%
! GAGCTCTCAGTATGTTTTCT+CGG + tig0029125:27462-27481 None:intergenic 40.0%
! AACAACCTAAAAGGGCTAGT+CGG + tig0029125:27502-27521 None:intergenic 40.0%
!!! ACTAGCCCTTTTAGGTTGTT+GGG - tig0029125:27502-27521 Msa1440810:intron 40.0%
GAGAACCCAACAACCTAAAA+GGG + tig0029125:23532-23551 None:intergenic 40.0%
TGAGAACCCAACAACCTAAA+AGG + tig0029125:23533-23552 None:intergenic 40.0%
TTGTTGGGTTCTCATCATCT+CGG - tig0029125:23539-23558 Msa1440810:five_prime_UTR 40.0%
AGCTCATTAAAGTGACTGCA+GGG - tig0029125:27599-27618 Msa1440810:five_prime_UTR 40.0%
AGAAGACAATGCAAACTGCA+GGG + tig0029125:27930-27949 None:intergenic 40.0%
CATTCTGGCCATCAAAAAGT+CGG + tig0029125:28076-28095 None:intergenic 40.0%
!! ACTTTTTGATGGCCAGAATG+CGG - tig0029125:28076-28095 Msa1440810:intron 40.0%
AATGCGGAGTTTAGCACATA+CGG - tig0029125:28092-28111 Msa1440810:intron 40.0%
!! TTGACTCCAACTTTCAGGTT+GGG + tig0029125:28206-28225 None:intergenic 40.0%
! TTTGACTCCAACTTTCAGGT+TGG + tig0029125:28207-28226 None:intergenic 40.0%
CTAAGCGCGAGACTAATATT+TGG - tig0029125:28271-28290 Msa1440810:intron 40.0%
ATTTCCAATGATCGGCATTG+GGG + tig0029125:28567-28586 None:intergenic 40.0%
GATTTCCAATGATCGGCATT+GGG + tig0029125:28568-28587 None:intergenic 40.0%
TGATTTCCAATGATCGGCAT+TGG + tig0029125:28569-28588 None:intergenic 40.0%
GAAGAGCGGAAAAATCGCAA+TGG + tig0029125:18269-18288 None:intergenic 45.0%
!! GCCATTTTCGAGCTTCAGAT+TGG + tig0029125:18291-18310 None:intergenic 45.0%
ATGGCAATTGAAGCTCGTTG+AGG - tig0029125:18306-18325 Msa1440810:three_prime_UTR 45.0%
TTGCTATCTCAGGTCCTGTT+TGG - tig0029125:18633-18652 Msa1440810:three_prime_UTR 45.0%
GGAAGCTATTCGAGAAGAAG+AGG - tig0029125:18885-18904 Msa1440810:intron 45.0%
CATGGTTTGATCAGTCTGCA+AGG + tig0029125:19973-19992 None:intergenic 45.0%
CTCTATCATGCCATAGTGTG+TGG + tig0029125:20319-20338 None:intergenic 45.0%
TTATAGAGGGAATCACGCGT+GGG + tig0029125:20524-20543 None:intergenic 45.0%
TTTATAGAGGGAATCACGCG+TGG + tig0029125:20525-20544 None:intergenic 45.0%
! GATCTCCTGGGTTTTCCAAT+CGG + tig0029125:20706-20725 None:intergenic 45.0%
AGGATTAGAGTTCGATGCGA+TGG - tig0029125:20730-20749 Msa1440810:intron 45.0%
!! ATGACGGATGGTGTTGAAGT+TGG - tig0029125:20760-20779 Msa1440810:intron 45.0%
AGGAGGACCGATATTGTAGT+AGG - tig0029125:20817-20836 Msa1440810:CDS 45.0%
AGGACCGATATTGTAGTAGG+TGG - tig0029125:20820-20839 Msa1440810:CDS 45.0%
ACCGATATTGTAGTAGGTGG+TGG - tig0029125:20823-20842 Msa1440810:CDS 45.0%
! GATATTGTAGTAGGTGGTGG+TGG - tig0029125:20826-20845 Msa1440810:CDS 45.0%
! TATTGTAGTAGGTGGTGGTG+GGG - tig0029125:20828-20847 Msa1440810:CDS 45.0%
!! TGGTGGTGGAGAAATAAGGA+TGG - tig0029125:20918-20937 Msa1440810:exon 45.0%
GGTGGAGAAATAAGGATGGA+TGG - tig0029125:20922-20941 Msa1440810:five_prime_UTR 45.0%
! AGGATGGATGGTGTTGAAGT+TGG - tig0029125:20934-20953 Msa1440810:five_prime_UTR 45.0%
! ATGGATGGTGTTGAAGTTGG+CGG - tig0029125:20937-20956 Msa1440810:five_prime_UTR 45.0%
AGGAGGACAGATGGTGTAAT+AGG - tig0029125:20997-21016 Msa1440810:five_prime_UTR 45.0%
AGGACAGATGGTGTAATAGG+TGG - tig0029125:21000-21019 Msa1440810:five_prime_UTR 45.0%
ACAGATGGTGTAATAGGTGG+TGG - tig0029125:21003-21022 Msa1440810:five_prime_UTR 45.0%
! ATGGTGTAATAGGTGGTGGT+GGG - tig0029125:21007-21026 Msa1440810:five_prime_UTR 45.0%
GTCCAAAAGAATTAGGGCCA+TGG - tig0029125:20861-20880 Msa1440810:CDS 45.0%
ATTAGGGCCATGGTTGAAGT+TGG - tig0029125:21051-21070 Msa1440810:five_prime_UTR 45.0%
!! TAGATGGTGGTGGAGAAATG+AGG - tig0029125:21094-21113 Msa1440810:five_prime_UTR 45.0%
! AGGATGGATGGTGTTGAAGT+TGG - tig0029125:20934-20953 Msa1440810:five_prime_UTR 45.0%
! ATGGATGGTGTTGAAGTTGG+CGG - tig0029125:20937-20956 Msa1440810:five_prime_UTR 45.0%
ACCACCATCTACAACTCCAT+CGG + tig0029125:21181-21200 None:intergenic 45.0%
ATCAGGGCAATGGATGAAGT+TGG - tig0029125:21225-21244 Msa1440810:five_prime_UTR 45.0%
TGTGTCTGACACGACACTTA+TGG + tig0029125:21405-21424 None:intergenic 45.0%
! GTGCGGCTTTTACCTATATC+AGG + tig0029125:21659-21678 None:intergenic 45.0%
AATCGATCGGAGAGTTCTAC+CGG + tig0029125:21726-21745 None:intergenic 45.0%
GATCTGCACCTTTCTCTTTC+TGG + tig0029125:21854-21873 None:intergenic 45.0%
CACAGAACCCAATGAGTAAG+AGG + tig0029125:21969-21988 None:intergenic 45.0%
!!! AAAGACTGGTTTTGCGCCTA+GGG - tig0029125:22082-22101 Msa1440810:five_prime_UTR 45.0%
GAGTACTAATCATGCTCCCT+AGG + tig0029125:22101-22120 None:intergenic 45.0%
CCTCTTAGCCTAAGAGTCTT+AGG + tig0029125:22412-22431 None:intergenic 45.0%
CCTAAGACTCTTAGGCTAAG+AGG - tig0029125:22409-22428 Msa1440810:five_prime_UTR 45.0%
TCATTCAAGCACATAGAGCC+CGG - tig0029125:22790-22809 Msa1440810:five_prime_UTR 45.0%
AATGGCAGAAGGGTTTCTGT+AGG + tig0029125:23001-23020 None:intergenic 45.0%
AAACCTGGTCAATGGCAGAA+GGG + tig0029125:23011-23030 None:intergenic 45.0%
TCAAGCACAAACCTGGTCAA+TGG + tig0029125:23019-23038 None:intergenic 45.0%
! CTTTTGCCGAATATACGGCT+AGG - tig0029125:23155-23174 Msa1440810:intron 45.0%
GTTTGAGAAGCAGCATAGAG+TGG - tig0029125:23246-23265 Msa1440810:five_prime_UTR 45.0%
AATGGAAAGAGAGGCTTCAC+AGG - tig0029125:23279-23298 Msa1440810:five_prime_UTR 45.0%
AAAGAGAGGCTTCACAGGTT+AGG - tig0029125:23284-23303 Msa1440810:five_prime_UTR 45.0%
AAGAGAGGCTTCACAGGTTA+GGG - tig0029125:23285-23304 Msa1440810:five_prime_UTR 45.0%
GTTTCCTGAGCAAATGTGAC+AGG + tig0029125:23322-23341 None:intergenic 45.0%
AGCAGTGGAATGGTTCACAA+GGG + tig0029125:23395-23414 None:intergenic 45.0%
AAGCAGTGGAATGGTTCACA+AGG + tig0029125:23396-23415 None:intergenic 45.0%
!!! CATTTCTGGCTAGCCCTTTT+AGG - tig0029125:23516-23535 Msa1440810:five_prime_UTR 45.0%
!!! GCTAGCCCTTTTAGGTTGTT+GGG - tig0029125:23524-23543 Msa1440810:five_prime_UTR 45.0%
!! CTTATGTTGTTGGGTTGGGA+GGG + tig0029125:23601-23620 None:intergenic 45.0%
!! TCTTATGTTGTTGGGTTGGG+AGG + tig0029125:23602-23621 None:intergenic 45.0%
GAGCTCTTATGTTGTTGGGT+TGG + tig0029125:23606-23625 None:intergenic 45.0%
AGCTCATTAAAGCGACCACA+GGG - tig0029125:23621-23640 Msa1440810:five_prime_UTR 45.0%
TAGAGGATGAAGGTCGTGTT+TGG - tig0029125:23713-23732 Msa1440810:intron 45.0%
TGTTGGAGGATCCTTTGATG+TGG - tig0029125:23936-23955 Msa1440810:five_prime_UTR 45.0%
GAATTGAACTCAACCCAACG+TGG - tig0029125:24223-24242 Msa1440810:intron 45.0%
GGCAACTCTGTTGAAGTAAG+TGG - tig0029125:24396-24415 Msa1440810:intron 45.0%
GAAGTTGTGCATACATCTGG+CGG - tig0029125:24674-24693 Msa1440810:intron 45.0%
TGTGTCGAAGACACTGGAAT+TGG - tig0029125:24863-24882 Msa1440810:five_prime_UTR 45.0%
TTTATAAGCCGGCCACAGAT+TGG - tig0029125:25025-25044 Msa1440810:five_prime_UTR 45.0%
! TAGAGGGTTTAAAGCCGTTG+TGG - tig0029125:25144-25163 Msa1440810:five_prime_UTR 45.0%
AGGTTTCCCATCAACCACAA+CGG + tig0029125:25161-25180 None:intergenic 45.0%
AGTCGCAAACGCCATCAATA+AGG - tig0029125:25234-25253 Msa1440810:five_prime_UTR 45.0%
AAAAATGGTGCTTCCAGCAC+AGG - tig0029125:25274-25293 Msa1440810:five_prime_UTR 45.0%
AAAATGGTGCTTCCAGCACA+GGG - tig0029125:25275-25294 Msa1440810:five_prime_UTR 45.0%
AGATTCATGGGTTTGTGGAG+AGG - tig0029125:25587-25606 Msa1440810:five_prime_UTR 45.0%
GTAGCAAGAAGGATCATTCG+AGG + tig0029125:25667-25686 None:intergenic 45.0%
GAAGCCACTGAGAACTAGTA+TGG - tig0029125:25750-25769 Msa1440810:intron 45.0%
CCACTGAGAACTAGTATGGT+GGG - tig0029125:25754-25773 Msa1440810:intron 45.0%
! AGCTTGCCTTCAGCAAGTTT+TGG - tig0029125:25777-25796 Msa1440810:intron 45.0%
! GCTTGCCTTCAGCAAGTTTT+GGG - tig0029125:25778-25797 Msa1440810:intron 45.0%
!! CTGTTCCCAAAACTTGCTGA+AGG + tig0029125:25786-25805 None:intergenic 45.0%
!!! CTTCAGCAAGTTTTGGGAAC+AGG - tig0029125:25784-25803 Msa1440810:intron 45.0%
! TCAGTTTGAAGCCTTCTGTG+CGG - tig0029125:25850-25869 Msa1440810:intron 45.0%
ATGTCAATGGAAGTGACTGC+AGG - tig0029125:25893-25912 Msa1440810:intron 45.0%
GCAGGTGCCTTGAAAAACTT+TGG - tig0029125:25911-25930 Msa1440810:intron 45.0%
TAGCCAACATGCAAGTTACG+TGG + tig0029125:26208-26227 None:intergenic 45.0%
TGAAGCAACTCGTCGAATTC+GGG - tig0029125:26427-26446 Msa1440810:five_prime_UTR 45.0%
TCTGCTGTCATGGCCAATAT+AGG + tig0029125:26521-26540 None:intergenic 45.0%
!! GTAACTTTGAAGCCAAAGGG+TGG + tig0029125:27109-27128 None:intergenic 45.0%
! CTTTTGCAGAATATGCGGCT+AGG - tig0029125:27135-27154 Msa1440810:intron 45.0%
GTTTGAGAAGCAGCATAGAG+TGG - tig0029125:23246-23265 Msa1440810:five_prime_UTR 45.0%
AATGGAAAGAGAGGCTTCAC+AGG - tig0029125:23279-23298 Msa1440810:five_prime_UTR 45.0%
AAAGAGAGGCTTCACAGGTT+AGG - tig0029125:23284-23303 Msa1440810:five_prime_UTR 45.0%
AAGAGAGGCTTCACAGGTTA+GGG - tig0029125:23285-23304 Msa1440810:five_prime_UTR 45.0%
! TGCACCGGTCATATTTGCTT+AGG - tig0029125:27298-27317 Msa1440810:intron 45.0%
AACATACTGAGAGCTCCTAC+TGG - tig0029125:27466-27485 Msa1440810:intron 45.0%
ACATACTGAGAGCTCCTACT+GGG - tig0029125:27467-27486 Msa1440810:intron 45.0%
!! TTGTTCCGACTAGCCCTTTT+AGG - tig0029125:27494-27513 Msa1440810:intron 45.0%
!!! GACTAGCCCTTTTAGGTTGT+TGG - tig0029125:27501-27520 Msa1440810:intron 45.0%
AGCTCTTCTGTTGTTGGGTT+GGG + tig0029125:27583-27602 None:intergenic 45.0%
GAGCTCATTAAAGTGACTGC+AGG - tig0029125:27598-27617 Msa1440810:five_prime_UTR 45.0%
GAAGACAATGCAAACTGCAG+GGG + tig0029125:27929-27948 None:intergenic 45.0%
GAGAAGACAATGCAAACTGC+AGG + tig0029125:27931-27950 None:intergenic 45.0%
TGTCAGGGAAACATTGCTGA+AGG - tig0029125:28039-28058 Msa1440810:intron 45.0%
ATGTGCTAAACTCCGCATTC+TGG + tig0029125:28091-28110 None:intergenic 45.0%
ATGCGGAGTTTAGCACATAC+GGG - tig0029125:28093-28112 Msa1440810:intron 45.0%
GCTTCTACGGGTAATGTTGT+GGG - tig0029125:28121-28140 Msa1440810:intron 45.0%
CTTCTACGGGTAATGTTGTG+GGG - tig0029125:28122-28141 Msa1440810:intron 45.0%
! GCATGACGACTTGGATTTCA+TGG - tig0029125:28144-28163 Msa1440810:intron 45.0%
AAAACCCCAATGCCGATCAT+TGG - tig0029125:28560-28579 Msa1440810:five_prime_UTR 45.0%
CGAGCTTCAGATTGGAAGAG+CGG + tig0029125:18283-18302 None:intergenic 50.0%
CTTAGGCCACTTGTCGAATC+TGG + tig0029125:18918-18937 None:intergenic 50.0%
ATGCGATGGCGAAAGGATGA+CGG - tig0029125:20744-20763 Msa1440810:intron 50.0%
! ACGGATGGTGTTGAAGTTGG+CGG - tig0029125:20763-20782 Msa1440810:intron 50.0%
AGGGCCATTGTTGAAGTTGG+TGG - tig0029125:20874-20893 Msa1440810:CDS 50.0%
!! GCCATTGTTGAAGTTGGTGG+CGG - tig0029125:20877-20896 Msa1440810:CDS 50.0%
ACCGCCACCAACTTCAACAA+TGG + tig0029125:20881-20900 None:intergenic 50.0%
!! ATTGTTGAAGTTGGTGGCGG+TGG - tig0029125:20880-20899 Msa1440810:CDS 50.0%
! AATGAGGCTGTAGATGGTGG+TGG - tig0029125:20904-20923 Msa1440810:exon 50.0%
! GATGGTGTAATAGGTGGTGG+TGG - tig0029125:21006-21025 Msa1440810:five_prime_UTR 50.0%
! TGGTGTAATAGGTGGTGGTG+GGG - tig0029125:21008-21027 Msa1440810:five_prime_UTR 50.0%
!! TAATAGGTGGTGGTGGGGAA+AGG - tig0029125:21013-21032 Msa1440810:five_prime_UTR 50.0%
! AATGAGGCTGTAGATGGTGG+TGG - tig0029125:20904-20923 Msa1440810:exon 50.0%
!! TGGTGGTGGAGAAATGAGGA+TGG - tig0029125:21098-21117 Msa1440810:five_prime_UTR 50.0%
GGTGGAGAAATGAGGATGGA+TGG - tig0029125:21102-21121 Msa1440810:five_prime_UTR 50.0%
AGGACCGATGGAGTTGTAGA+TGG - tig0029125:21174-21193 Msa1440810:five_prime_UTR 50.0%
ACCGATGGAGTTGTAGATGG+TGG - tig0029125:21177-21196 Msa1440810:five_prime_UTR 50.0%
! GATGGAGTTGTAGATGGTGG+TGG - tig0029125:21180-21199 Msa1440810:five_prime_UTR 50.0%
!! TTGTAGATGGTGGTGGCGAA+AGG - tig0029125:21187-21206 Msa1440810:five_prime_UTR 50.0%
AGGGCAATGGATGAAGTTGG+TGG - tig0029125:21228-21247 Msa1440810:five_prime_UTR 50.0%
!! ATGGATGAAGTTGGTGGCGA+TGG - tig0029125:21234-21253 Msa1440810:five_prime_UTR 50.0%
GTTGGCGATGGAGATGTACA+TGG - tig0029125:21270-21289 Msa1440810:intron 50.0%
GGAGATGTACATGGTGGTTG+TGG - tig0029125:21279-21298 Msa1440810:intron 50.0%
! AAGTGTCGTGTCAGACACAC+CGG - tig0029125:21406-21425 Msa1440810:intron 50.0%
TATGAAGCACGGACACTCCT+CGG + tig0029125:21444-21463 None:intergenic 50.0%
! GATTTAGCGGAGGCTTTGTG+CGG + tig0029125:21676-21695 None:intergenic 50.0%
CGAGGACATCACGGATTTAG+CGG + tig0029125:21689-21708 None:intergenic 50.0%
!!! CAAAGACTGGTTTTGCGCCT+AGG - tig0029125:22081-22100 Msa1440810:five_prime_UTR 50.0%
GCAAAATCAGCACCACCCTT+TGG - tig0029125:22725-22744 Msa1440810:intron 50.0%
!! GGAACTTTGAAGCCAAAGGG+TGG + tig0029125:22740-22759 None:intergenic 50.0%
GGATGGCTAGAGCATGAACA+TGG + tig0029125:22980-22999 None:intergenic 50.0%
GCAGAAGGGTTTCTGTAGGA+TGG + tig0029125:22997-23016 None:intergenic 50.0%
AAACCCTTCTGCCATTGACC+AGG - tig0029125:23005-23024 Msa1440810:intron 50.0%
CAAACCTGGTCAATGGCAGA+AGG + tig0029125:23012-23031 None:intergenic 50.0%
AGCGGTCCTAGCCGTATATT+CGG + tig0029125:23164-23183 None:intergenic 50.0%
TGCACCTGTCACATTTGCTC+AGG - tig0029125:23315-23334 Msa1440810:five_prime_UTR 50.0%
!!! GGCTAGCCCTTTTAGGTTGT+TGG - tig0029125:23523-23542 Msa1440810:five_prime_UTR 50.0%
GAGCTCATTAAAGCGACCAC+AGG - tig0029125:23620-23639 Msa1440810:five_prime_UTR 50.0%
CACAAGGGACTCCACATCAA+AGG + tig0029125:23950-23969 None:intergenic 50.0%
CTTTGATGTGGAGTCCCTTG+TGG - tig0029125:23948-23967 Msa1440810:five_prime_UTR 50.0%
AGTCTGAGCATAGCCACGTT+GGG + tig0029125:24239-24258 None:intergenic 50.0%
TCTTCGACACAGACCCATCT+AGG + tig0029125:24854-24873 None:intergenic 50.0%
!! AACTATGGTGGTACCGGCAT+TGG - tig0029125:24953-24972 Msa1440810:five_prime_UTR 50.0%
TGCCTAGCTGAACTAATGGG+CGG - tig0029125:24992-25011 Msa1440810:five_prime_UTR 50.0%
AGGTACTTCCAATCTGTGGC+CGG + tig0029125:25036-25055 None:intergenic 50.0%
! CTAGTCACAGCAGCTCTAAC+AGG + tig0029125:25181-25200 None:intergenic 50.0%
TCATGGGTTTGTGGAGAGGA+CGG - tig0029125:25591-25610 Msa1440810:five_prime_UTR 50.0%
TGCGGCAACTGGAAACAGAA+CGG - tig0029125:25625-25644 Msa1440810:five_prime_UTR 50.0%
GCCACTGAGAACTAGTATGG+TGG - tig0029125:25753-25772 Msa1440810:intron 50.0%
! CCCACCATACTAGTTCTCAG+TGG + tig0029125:25757-25776 None:intergenic 50.0%
AACAGGCAAGAAGAGACAGC+CGG - tig0029125:25801-25820 Msa1440810:intron 50.0%
! CCATCAGGCATCTCTTTTCC+CGG + tig0029125:25823-25842 None:intergenic 50.0%
GATGTGAAGTGTGCAGACAG+CGG - tig0029125:25938-25957 Msa1440810:intron 50.0%
AACTCGTCGAATTCGGGAGA+TGG - tig0029125:26433-26452 Msa1440810:five_prime_UTR 50.0%
AATTCGGGAGATGGAGAGGA+CGG - tig0029125:26442-26461 Msa1440810:five_prime_UTR 50.0%
GCAAAATCAGCACCACCCTT+TGG - tig0029125:22725-22744 Msa1440810:intron 50.0%
GGTTAGGGATGAGTATGCAC+CGG - tig0029125:23300-23319 Msa1440810:five_prime_UTR 50.0%
GTCGGAACAAACTTCCCAGT+AGG + tig0029125:27484-27503 None:intergenic 50.0%
!! CTTCTGTTGTTGGGTTGGGA+GGG + tig0029125:27579-27598 None:intergenic 50.0%
!! TCTTCTGTTGTTGGGTTGGG+AGG + tig0029125:27580-27599 None:intergenic 50.0%
GAGCTCTTCTGTTGTTGGGT+TGG + tig0029125:27584-27603 None:intergenic 50.0%
TGCGGAGTTTAGCACATACG+GGG - tig0029125:28094-28113 Msa1440810:intron 50.0%
AGTTTAGCACATACGGGGAC+TGG - tig0029125:28099-28118 Msa1440810:intron 50.0%
GGCTTCTACGGGTAATGTTG+TGG - tig0029125:28120-28139 Msa1440810:intron 50.0%
ATCTAGACTCCGACACGTTC+CGG - tig0029125:28176-28195 Msa1440810:intron 50.0%
!! AACTTTCAGGTTGGGTCTGC+CGG + tig0029125:28198-28217 None:intergenic 50.0%
ACTATTGCTGCTGTGCTCGT+TGG - tig0029125:28296-28315 Msa1440810:intron 50.0%
GAGTTCGATGCGATGGCGAA+AGG - tig0029125:20737-20756 Msa1440810:intron 55.0%
!! GATGGCGAAAGGATGACGGA+TGG - tig0029125:20748-20767 Msa1440810:intron 55.0%
! GATGGTGTTGAAGTTGGCGG+TGG - tig0029125:20766-20785 Msa1440810:intron 55.0%
!! TAGTAGGTGGTGGTGGGGAA+AGG - tig0029125:20833-20852 Msa1440810:CDS 55.0%
GGTGGCAATGAGGCTGTAGA+TGG - tig0029125:20898-20917 Msa1440810:CDS 55.0%
GGCAATGAGGCTGTAGATGG+TGG - tig0029125:20901-20920 Msa1440810:exon 55.0%
! GATGGTGTTGAAGTTGGCGG+TGG - tig0029125:20766-20785 Msa1440810:intron 55.0%
AGGGCCATGGTTGAAGTTGG+TGG - tig0029125:21054-21073 Msa1440810:five_prime_UTR 55.0%
!! GCCATGGTTGAAGTTGGTGG+CGG - tig0029125:21057-21076 Msa1440810:five_prime_UTR 55.0%
ACCGCCACCAACTTCAACCA+TGG + tig0029125:21061-21080 None:intergenic 55.0%
!! ATGGTTGAAGTTGGTGGCGG+TGG - tig0029125:21060-21079 Msa1440810:five_prime_UTR 55.0%
GGTGGCAATGAGGCTGTAGA+TGG - tig0029125:20898-20917 Msa1440810:CDS 55.0%
GGCAATGAGGCTGTAGATGG+TGG - tig0029125:20901-20920 Msa1440810:exon 55.0%
! GATGGTGTTGAAGTTGGCGG+TGG - tig0029125:20766-20785 Msa1440810:intron 55.0%
!! ATGGTGGTGGCGAAAGGAGA+AGG - tig0029125:21193-21212 Msa1440810:five_prime_UTR 55.0%
!! GATGAAGTTGGTGGCGATGG+CGG - tig0029125:21237-21256 Msa1440810:five_prime_UTR 55.0%
GGCGATGGAGATGTACATGG+TGG - tig0029125:21273-21292 Msa1440810:intron 55.0%
AGTGTCGTGTCAGACACACC+GGG - tig0029125:21407-21426 Msa1440810:intron 55.0%
GTGACGGCCACACCTGATAT+AGG - tig0029125:21644-21663 Msa1440810:five_prime_UTR 55.0%
GGACATCACGGATTTAGCGG+AGG + tig0029125:21686-21705 None:intergenic 55.0%
CCATTGCGACGAGGACATCA+CGG + tig0029125:21698-21717 None:intergenic 55.0%
TGATGTCCTCGTCGCAATGG+CGG - tig0029125:21698-21717 Msa1440810:five_prime_UTR 55.0%
GGCTGTTGAGAGAAGGGAGA+AGG - tig0029125:22155-22174 Msa1440810:five_prime_UTR 55.0%
TGTGCATAGGCCACTCCACT+CGG + tig0029125:23202-23221 None:intergenic 55.0%
GGGTTCTCATCATCTCGGTG+TGG - tig0029125:23544-23563 Msa1440810:five_prime_UTR 55.0%
CAGTCTGAGCATAGCCACGT+TGG + tig0029125:24240-24259 None:intergenic 55.0%
CTCAGACTGCTCAAGCGTGT+GGG - tig0029125:24251-24270 Msa1440810:intron 55.0%
TGGGTCTGTGTCGAAGACAC+TGG - tig0029125:24857-24876 Msa1440810:five_prime_UTR 55.0%
GACCGCCCATTAGTTCAGCT+AGG + tig0029125:24997-25016 None:intergenic 55.0%
CATGGGTTTGTGGAGAGGAC+GGG - tig0029125:25592-25611 Msa1440810:five_prime_UTR 55.0%
AGGACGGGATCTTCAGTGTG+CGG - tig0029125:25607-25626 Msa1440810:five_prime_UTR 55.0%
GATCTTCAGTGTGCGGCAAC+TGG - tig0029125:25614-25633 Msa1440810:five_prime_UTR 55.0%
ACAGGCAAGAAGAGACAGCC+GGG - tig0029125:25802-25821 Msa1440810:intron 55.0%
CCGGGAAAAGAGATGCCTGA+TGG - tig0029125:25820-25839 Msa1440810:intron 55.0%
GTCGAATTCGGGAGATGGAG+AGG - tig0029125:26438-26457 Msa1440810:five_prime_UTR 55.0%
ACGGCGAATGAGGAGACGAA+TGG - tig0029125:26461-26480 Msa1440810:five_prime_UTR 55.0%
TGTGCATAGGCCACTCCACT+CGG + tig0029125:23202-23221 None:intergenic 55.0%
GGGTTCTCATCATCTCGGTG+TGG - tig0029125:23544-23563 Msa1440810:five_prime_UTR 55.0%
!! CATACGGGGACTGGCTTCTA+CGG - tig0029125:28108-28127 Msa1440810:intron 55.0%
!! ATACGGGGACTGGCTTCTAC+GGG - tig0029125:28109-28128 Msa1440810:intron 55.0%
TGTTGTGGGGCATGACGACT+TGG - tig0029125:28135-28154 Msa1440810:intron 55.0%
GGCAGACCCAACCTGAAAGT+TGG - tig0029125:28197-28216 Msa1440810:intron 55.0%
!!! GCTGTGCTCGTTGGCTCTTT+TGG - tig0029125:28305-28324 Msa1440810:intron 55.0%
GTTGAAGTTGGCGGTGGCAC+CGG - tig0029125:20772-20791 Msa1440810:CDS 60.0%
!! CTGAAGGTGGTGGTGGCGAA+AGG - tig0029125:20797-20816 Msa1440810:CDS 60.0%
!! AAGGTGGTGGTGGCGAAAGG+AGG - tig0029125:20800-20819 Msa1440810:CDS 60.0%
!! GTGGTGGTGGGGAAAGGAGA+AGG - tig0029125:20839-20858 Msa1440810:CDS 60.0%
!! AGTTGGTGGCGGTGGCAATG+AGG - tig0029125:20888-20907 Msa1440810:CDS 60.0%
! GGTGTTGAAGTTGGCGGTGG+CGG - tig0029125:20769-20788 Msa1440810:intron 60.0%
! ACCAGAGCTGAAGGTGGTGG+TGG - tig0029125:20970-20989 Msa1440810:five_prime_UTR 60.0%
!! CTGAAGGTGGTGGTGGCGAA+AGG - tig0029125:20797-20816 Msa1440810:CDS 60.0%
!! AAGGTGGTGGTGGCGAAAGG+AGG - tig0029125:20800-20819 Msa1440810:CDS 60.0%
GGTGGCGAAAGGAGGACAGA+TGG - tig0029125:20988-21007 Msa1440810:five_prime_UTR 60.0%
!! AGTTGGTGGCGGTGGCAATG+AGG - tig0029125:20888-20907 Msa1440810:CDS 60.0%
GTTGAAGTTGGCGGTGGCAC+CGG - tig0029125:20772-20791 Msa1440810:CDS 60.0%
!! CTGAAGGTGGTGGAGGGGAA+AGG - tig0029125:21151-21170 Msa1440810:five_prime_UTR 60.0%
!! AAGGTGGTGGAGGGGAAAGG+AGG - tig0029125:21154-21173 Msa1440810:five_prime_UTR 60.0%
! ACGGACACTCCTCGGATTGG+GGG + tig0029125:21436-21455 None:intergenic 60.0%
CACGGACACTCCTCGGATTG+GGG + tig0029125:21437-21456 None:intergenic 60.0%
GCACGGACACTCCTCGGATT+GGG + tig0029125:21438-21457 None:intergenic 60.0%
AGCACGGACACTCCTCGGAT+TGG + tig0029125:21439-21458 None:intergenic 60.0%
CCGTGATGTCCTCGTCGCAA+TGG - tig0029125:21695-21714 Msa1440810:five_prime_UTR 60.0%
CGGCTAGGACCGCTTTCGAA+AGG - tig0029125:23170-23189 Msa1440810:five_prime_UTR 60.0%
! CGGTAGCGGCCTTTCGAAAG+CGG + tig0029125:23182-23201 None:intergenic 60.0%
TTCGAAAGGCCGCTACCGAG+TGG - tig0029125:23184-23203 Msa1440810:five_prime_UTR 60.0%
TAGGCCACTCCACTCGGTAG+CGG + tig0029125:23196-23215 None:intergenic 60.0%
GCTCAGACTGCTCAAGCGTG+TGG - tig0029125:24250-24269 Msa1440810:intron 60.0%
GACTGCTCAAGCGTGTGGGA+AGG - tig0029125:24255-24274 Msa1440810:intron 60.0%
GATGGAGAGGACGGCGAATG+AGG - tig0029125:26451-26470 Msa1440810:five_prime_UTR 60.0%
CGGCTAGGACCGCTTTCGAA+AGG - tig0029125:23170-23189 Msa1440810:five_prime_UTR 60.0%
! CGGTAGCGGCCTTTCGAAAG+CGG + tig0029125:23182-23201 None:intergenic 60.0%
TTCGAAAGGCCGCTACCGAG+TGG - tig0029125:23184-23203 Msa1440810:five_prime_UTR 60.0%
TAGGCCACTCCACTCGGTAG+CGG + tig0029125:23196-23215 None:intergenic 60.0%
TTGGGTCTGCCGGAACGTGT+CGG + tig0029125:28188-28207 None:intergenic 60.0%
! ACCGGAGCTGAAGGTGGTGG+TGG - tig0029125:20790-20809 Msa1440810:CDS 65.0%
GCCACCACCACCTTCAGCTC+CGG + tig0029125:20794-20813 None:intergenic 65.0%
! GTTGAAGTTGGCGGTGGCGG+TGG - tig0029125:20946-20965 Msa1440810:five_prime_UTR 65.0%
GGTGGCACCAGAGCTGAAGG+TGG - tig0029125:20964-20983 Msa1440810:five_prime_UTR 65.0%
GGCACCAGAGCTGAAGGTGG+TGG - tig0029125:20967-20986 Msa1440810:five_prime_UTR 65.0%
GCCACCACCACCTTCAGCTC+TGG + tig0029125:20794-20813 None:intergenic 65.0%
! ACCGGAGCTGAAGGTGGTGG+AGG - tig0029125:20790-20809 Msa1440810:CDS 65.0%
CCCTCCACCACCTTCAGCTC+CGG + tig0029125:21148-21167 None:intergenic 65.0%
!! CCGGAGCTGAAGGTGGTGGA+GGG - tig0029125:21145-21164 Msa1440810:five_prime_UTR 65.0%
!! CGGAGCTGAAGGTGGTGGAG+GGG - tig0029125:21146-21165 Msa1440810:five_prime_UTR 65.0%
GGAGGGGAAAGGAGGACCGA+TGG - tig0029125:21162-21181 Msa1440810:five_prime_UTR 65.0%
!! GTTGGTGGCGATGGCGGTTG+CGG - tig0029125:21243-21262 Msa1440810:intron 65.0%
! GATGGCGGTTGCGGTGGTGT+TGG - tig0029125:21252-21271 Msa1440810:intron 65.0%
!! GGTTGCGGTGGTGTTGGCGA+TGG - tig0029125:21258-21277 Msa1440810:intron 65.0%
!! TCCTCGGATTGGGGGTGTCC+CGG + tig0029125:21428-21447 None:intergenic 65.0%
CCTCGTCGCAATGGCGGTTC+CGG - tig0029125:21704-21723 Msa1440810:five_prime_UTR 65.0%
AAGGCCGCTACCGAGTGGAG+TGG - tig0029125:23189-23208 Msa1440810:five_prime_UTR 65.0%
AAGGCCGCTACCGAGTGGAG+TGG - tig0029125:23189-23208 Msa1440810:five_prime_UTR 65.0%
! GGTGGCACCGGAGCTGAAGG+TGG - tig0029125:20784-20803 Msa1440810:CDS 70.0%
! GGCACCGGAGCTGAAGGTGG+TGG - tig0029125:20787-20806 Msa1440810:CDS 70.0%
GGCGGTGGCACCAGAGCTGA+AGG - tig0029125:20961-20980 Msa1440810:five_prime_UTR 70.0%
! GGTGGCACCGGAGCTGAAGG+TGG - tig0029125:20784-20803 Msa1440810:CDS 70.0%
! GGCACCGGAGCTGAAGGTGG+TGG - tig0029125:20787-20806 Msa1440810:CDS 70.0%
ACCGGGACACCCCCAATCCG+AGG - tig0029125:21424-21443 Msa1440810:intron 70.0%
CCGGAACCGCCATTGCGACG+AGG + tig0029125:21707-21726 None:intergenic 70.0%
! GGCGGTGGCACCGGAGCTGA+AGG - tig0029125:20781-20800 Msa1440810:CDS 75.0%
! GGCGGTGGCACCGGAGCTGA+AGG - tig0029125:20781-20800 Msa1440810:CDS 75.0%
! GGTGGCGATGGCGGTTGCGG+TGG - tig0029125:21246-21265 Msa1440810:intron 75.0%
Chromosome Type Strat End Strand Name
tig0029125 gene 18206 28606 18206 ID=Msa1440810;Name=Msa1440810
tig0029125 mRNA 18206 28606 18206 ID=Msa1440810-mRNA-1;Parent=Msa1440810;Name=Msa1440810-mRNA-1;_AED=0.11;_eAED=0.12;_QI=4343|0.8|0.87|1|0.26|0.25|16|472|271
tig0029125 exon 18206 18767 18206 ID=Msa1440810-mRNA-1:exon:12451;Parent=Msa1440810-mRNA-1
tig0029125 exon 19203 19358 19203 ID=Msa1440810-mRNA-1:exon:12450;Parent=Msa1440810-mRNA-1
tig0029125 exon 19508 19726 19508 ID=Msa1440810-mRNA-1:exon:12449;Parent=Msa1440810-mRNA-1
tig0029125 exon 20187 20388 20187 ID=Msa1440810-mRNA-1:exon:12448;Parent=Msa1440810-mRNA-1
tig0029125 exon 20771 21258 20771 ID=Msa1440810-mRNA-1:exon:12447;Parent=Msa1440810-mRNA-1
tig0029125 exon 21516 22240 21516 ID=Msa1440810-mRNA-1:exon:12446;Parent=Msa1440810-mRNA-1
tig0029125 exon 22402 22614 22402 ID=Msa1440810-mRNA-1:exon:12445;Parent=Msa1440810-mRNA-1
tig0029125 exon 22751 22879 22751 ID=Msa1440810-mRNA-1:exon:12444;Parent=Msa1440810-mRNA-1
tig0029125 exon 23170 23339 23170 ID=Msa1440810-mRNA-1:exon:12443;Parent=Msa1440810-mRNA-1
tig0029125 exon 23432 23661 23432 ID=Msa1440810-mRNA-1:exon:12442;Parent=Msa1440810-mRNA-1
tig0029125 exon 23786 24124 23786 ID=Msa1440810-mRNA-1:exon:12441;Parent=Msa1440810-mRNA-1
tig0029125 exon 24789 25298 24789 ID=Msa1440810-mRNA-1:exon:12440;Parent=Msa1440810-mRNA-1
tig0029125 exon 25470 25655 25470 ID=Msa1440810-mRNA-1:exon:12439;Parent=Msa1440810-mRNA-1
tig0029125 exon 26010 26893 26010 ID=Msa1440810-mRNA-1:exon:12438;Parent=Msa1440810-mRNA-1
tig0029125 exon 27552 27922 27552 ID=Msa1440810-mRNA-1:exon:12437;Parent=Msa1440810-mRNA-1
tig0029125 exon 28360 28606 28360 ID=Msa1440810-mRNA-1:exon:12436;Parent=Msa1440810-mRNA-1
tig0029125 five_prime_UTR 28360 28606 28360 ID=Msa1440810-mRNA-1:five_prime_utr;Parent=Msa1440810-mRNA-1
tig0029125 five_prime_UTR 27552 27922 27552 ID=Msa1440810-mRNA-1:five_prime_utr;Parent=Msa1440810-mRNA-1
tig0029125 five_prime_UTR 26010 26893 26010 ID=Msa1440810-mRNA-1:five_prime_utr;Parent=Msa1440810-mRNA-1
tig0029125 five_prime_UTR 25470 25655 25470 ID=Msa1440810-mRNA-1:five_prime_utr;Parent=Msa1440810-mRNA-1
tig0029125 five_prime_UTR 24789 25298 24789 ID=Msa1440810-mRNA-1:five_prime_utr;Parent=Msa1440810-mRNA-1
tig0029125 five_prime_UTR 23786 24124 23786 ID=Msa1440810-mRNA-1:five_prime_utr;Parent=Msa1440810-mRNA-1
tig0029125 five_prime_UTR 23432 23661 23432 ID=Msa1440810-mRNA-1:five_prime_utr;Parent=Msa1440810-mRNA-1
tig0029125 five_prime_UTR 23170 23339 23170 ID=Msa1440810-mRNA-1:five_prime_utr;Parent=Msa1440810-mRNA-1
tig0029125 five_prime_UTR 22751 22879 22751 ID=Msa1440810-mRNA-1:five_prime_utr;Parent=Msa1440810-mRNA-1
tig0029125 five_prime_UTR 22402 22614 22402 ID=Msa1440810-mRNA-1:five_prime_utr;Parent=Msa1440810-mRNA-1
tig0029125 five_prime_UTR 21516 22240 21516 ID=Msa1440810-mRNA-1:five_prime_utr;Parent=Msa1440810-mRNA-1
tig0029125 five_prime_UTR 20920 21258 20920 ID=Msa1440810-mRNA-1:five_prime_utr;Parent=Msa1440810-mRNA-1
tig0029125 CDS 20771 20919 20771 ID=Msa1440810-mRNA-1:cds;Parent=Msa1440810-mRNA-1
tig0029125 CDS 20187 20388 20187 ID=Msa1440810-mRNA-1:cds;Parent=Msa1440810-mRNA-1
tig0029125 CDS 19508 19726 19508 ID=Msa1440810-mRNA-1:cds;Parent=Msa1440810-mRNA-1
tig0029125 CDS 19203 19358 19203 ID=Msa1440810-mRNA-1:cds;Parent=Msa1440810-mRNA-1
tig0029125 CDS 18678 18767 18678 ID=Msa1440810-mRNA-1:cds;Parent=Msa1440810-mRNA-1
tig0029125 three_prime_UTR 18206 18677 18206 ID=Msa1440810-mRNA-1:three_prime_utr;Parent=Msa1440810-mRNA-1
Gene Sequence

>Msa1440810

ATGTCAATGGAAGTGACTGCAGGTGCCTTGAAAAACTTTGGAGCGGATGTGAAGTGTGCAGACAGCGGCAAAGCTGCTCTTGAAATGCTTCTATTCCCTCACAAGTTTGATGCTTGCTTCAAGGATATTCAAATGCAAGAAAAGGACGGGTTTGAAGCAACTCGTCGAATTCGGGAGATGGAGAGGACGGCGAATGAGGAGACGAATGGTGAATGTAGTGAAAGGAAAAGTAAATTCCGTTTACCTATATTGGCCATGACAGCAGATGTAATCCATGCTACATATGAAGAGTGTTTGAAATGTGGGATGGATGGTTATGTCTCAAAACCTTTTGAGGAAGGAATTGTTCAGATGAAGATGCAAAATCAGCACCACCCTTTGGCTTCAAAGTTACAAGAAACTTTTGCAGAATATGCGGCTAGGACCGCTTTCGAAAGGCCGCTACCGAGTGGAGTGGCCTATGCACAAAGAGTTGTTAACTCGGAAAGAGAGCGGTTTGAGAAGCAGCATAGAGTGGTTATAAAGACAATGGAAAGAGAGGCTTCACAGGTTAGGGATGAGTATGCACCGGATGACCGAGAAAACATACTGAGAGCTCCTACTGGGAAGTTTGTTCCGACTAGCCCTTTTAGGTTGTTGGGTTCTCATCATCTCGGTGTGGTTTTAACATTTCCTGTTTACAAATTTAAGCTCCCTCCCAACCCAACAACAGAAGAGCTCATTAAAGGAAACATTGCTGAAGGTGCACTTTTAACCGACTTTTTGATGGCCAGAATGCGGAGTTTAGCACATACGGGGACTGGCTTCTACGGGTAA
Protein sequence

>Msa1440810

MSMEVTAGALKNFGADVKCADSGKAALEMLLFPHKFDACFKDIQMQEKDGFEATRRIREMERTANEETNGECSERKSKFRLPILAMTADVIHATYEECLKCGMDGYVSKPFEEGIVQMKMQNQHHPLASKLQETFAEYAARTAFERPLPSGVAYAQRVVNSERERFEKQHRVVIKTMEREASQVRDEYAPDDRENILRAPTGKFVPTSPFRLLGSHHLGVVLTFPVYKFKLPPNPTTEELIKGNIAEGALLTDFLMARMRSLAHTGTGFYG*