Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1019230 | XP_013448523.1 | 87.430 | 533 | 33 | 5 | 1 | 515 | 1 | 517 | 0.0 | 913 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1019230 | sp|Q9SRT2|BH062_ARATH | 43.487 | 522 | 214 | 17 | 1 | 514 | 1 | 449 | 2.78e-108 | 333 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1019230 | A0A072U9Q4 | 87.430 | 533 | 33 | 5 | 1 | 515 | 1 | 517 | 0.0 | 913 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008970 | Msa1019230 | 0.815350 | 9.670653e-52 | -8.615850e-47 |
| Msa0019570 | Msa1019230 | 0.832266 | 1.042979e-55 | -8.615850e-47 |
| Msa0024650 | Msa1019230 | 0.810168 | 1.318168e-50 | -8.615850e-47 |
| Msa0030880 | Msa1019230 | 0.807932 | 3.968789e-50 | -8.615850e-47 |
| Msa0036550 | Msa1019230 | 0.830658 | 2.594681e-55 | -8.615850e-47 |
| Msa0038010 | Msa1019230 | 0.808128 | 3.605578e-50 | -8.615850e-47 |
| Msa0042210 | Msa1019230 | -0.800052 | 1.726605e-48 | -8.615850e-47 |
| Msa0043990 | Msa1019230 | 0.822289 | 2.564736e-53 | -8.615850e-47 |
| Msa0046050 | Msa1019230 | -0.830680 | 2.562535e-55 | -8.615850e-47 |
| Msa0065400 | Msa1019230 | -0.806789 | 6.934869e-50 | -8.615850e-47 |
| Msa0065520 | Msa1019230 | -0.822049 | 2.916308e-53 | -8.615850e-47 |
| Msa0066350 | Msa1019230 | 0.801871 | 7.339715e-49 | -8.615850e-47 |
| Msa0081120 | Msa1019230 | -0.802290 | 6.016727e-49 | -8.615850e-47 |
| Msa0084390 | Msa1019230 | 0.803431 | 3.497942e-49 | -8.615850e-47 |
| Msa0087580 | Msa1019230 | -0.806730 | 7.139247e-50 | -8.615850e-47 |
| Msa0089510 | Msa1019230 | -0.836861 | 7.301106e-57 | -8.615850e-47 |
| Msa0089520 | Msa1019230 | -0.836962 | 6.880578e-57 | -8.615850e-47 |
| Msa0103600 | Msa1019230 | 0.813228 | 2.847027e-51 | -8.615850e-47 |
| Msa0111730 | Msa1019230 | 0.816362 | 5.749783e-52 | -8.615850e-47 |
| Msa0120450 | Msa1019230 | 0.808512 | 2.986388e-50 | -8.615850e-47 |
| Msa0612660 | Msa1019230 | 0.811326 | 7.404863e-51 | -8.615850e-47 |
| Msa0614980 | Msa1019230 | -0.806324 | 8.691776e-50 | -8.615850e-47 |
| Msa0617120 | Msa1019230 | -0.840091 | 1.071194e-57 | -8.615850e-47 |
| Msa0636720 | Msa1019230 | -0.802409 | 5.686716e-49 | -8.615850e-47 |
| Msa0643230 | Msa1019230 | 0.800040 | 1.736636e-48 | -8.615850e-47 |
| Msa0644220 | Msa1019230 | -0.813629 | 2.323192e-51 | -8.615850e-47 |
| Msa0659230 | Msa1019230 | 0.820770 | 5.753296e-53 | -8.615850e-47 |
| Msa0705810 | Msa1019230 | -0.803789 | 2.947608e-49 | -8.615850e-47 |
| Msa0715510 | Msa1019230 | 0.817248 | 3.639288e-52 | -8.615850e-47 |
| Msa0716600 | Msa1019230 | 0.809961 | 1.460951e-50 | -8.615850e-47 |
| Msa0732970 | Msa1019230 | 0.820192 | 7.808622e-53 | -8.615850e-47 |
| Msa0742090 | Msa1019230 | -0.816698 | 4.835910e-52 | -8.615850e-47 |
| Msa0745010 | Msa1019230 | -0.820448 | 6.821440e-53 | -8.615850e-47 |
| Msa0758150 | Msa1019230 | 0.826715 | 2.329460e-54 | -8.615850e-47 |
| Msa0773960 | Msa1019230 | 0.802515 | 5.409738e-49 | -8.615850e-47 |
| Msa0776590 | Msa1019230 | -0.807328 | 5.332775e-50 | -8.615850e-47 |
| Msa0792410 | Msa1019230 | 0.812799 | 3.534783e-51 | -8.615850e-47 |
| Msa0793100 | Msa1019230 | -0.822232 | 2.645155e-53 | -8.615850e-47 |
| Msa0817100 | Msa1019230 | 0.846992 | 1.532908e-59 | -8.615850e-47 |
| Msa0823310 | Msa1019230 | -0.801038 | 1.087237e-48 | -8.615850e-47 |
| Msa0825960 | Msa1019230 | -0.811159 | 8.049188e-51 | -8.615850e-47 |
| Msa0125600 | Msa1019230 | 0.808852 | 2.526113e-50 | -8.615850e-47 |
| Msa0130710 | Msa1019230 | 0.843086 | 1.739811e-58 | -8.615850e-47 |
| Msa0132250 | Msa1019230 | 0.809999 | 1.433068e-50 | -8.615850e-47 |
| Msa0134300 | Msa1019230 | -0.806333 | 8.658037e-50 | -8.615850e-47 |
| Msa0134380 | Msa1019230 | -0.807057 | 6.086721e-50 | -8.615850e-47 |
| Msa0136090 | Msa1019230 | 0.809678 | 1.680402e-50 | -8.615850e-47 |
| Msa0137010 | Msa1019230 | -0.823283 | 1.505501e-53 | -8.615850e-47 |
| Msa0157030 | Msa1019230 | -0.823881 | 1.090673e-53 | -8.615850e-47 |
| Msa0157740 | Msa1019230 | 0.827978 | 1.160247e-54 | -8.615850e-47 |
| Msa0158280 | Msa1019230 | 0.805914 | 1.060546e-49 | -8.615850e-47 |
| Msa0163690 | Msa1019230 | 0.825602 | 4.287365e-54 | -8.615850e-47 |
| Msa0176600 | Msa1019230 | 0.829975 | 3.810480e-55 | -8.615850e-47 |
| Msa0179830 | Msa1019230 | 0.800541 | 1.373172e-48 | -8.615850e-47 |
| Msa0180600 | Msa1019230 | -0.810651 | 1.036849e-50 | -8.615850e-47 |
| Msa0180780 | Msa1019230 | -0.820979 | 5.150403e-53 | -8.615850e-47 |
| Msa0185540 | Msa1019230 | -0.807775 | 4.287517e-50 | -8.615850e-47 |
| Msa0186510 | Msa1019230 | -0.833539 | 5.032824e-56 | -8.615850e-47 |
| Msa0191180 | Msa1019230 | -0.806920 | 6.506149e-50 | -8.615850e-47 |
| Msa0191990 | Msa1019230 | 0.836224 | 1.060685e-56 | -8.615850e-47 |
| Msa0192680 | Msa1019230 | 0.805270 | 1.447367e-49 | -8.615850e-47 |
| Msa0364550 | Msa1019230 | 0.819968 | 8.788442e-53 | -8.615850e-47 |
| Msa0385770 | Msa1019230 | -0.806356 | 8.559977e-50 | -8.615850e-47 |
| Msa0393880 | Msa1019230 | -0.817980 | 2.488821e-52 | -8.615850e-47 |
| Msa0404070 | Msa1019230 | -0.824229 | 9.038812e-54 | -8.615850e-47 |
| Msa0422250 | Msa1019230 | 0.816617 | 5.042962e-52 | -8.615850e-47 |
| Msa0424240 | Msa1019230 | 0.801779 | 7.664429e-49 | -8.615850e-47 |
| Msa0430040 | Msa1019230 | -0.841878 | 3.638209e-58 | -8.615850e-47 |
| Msa0433670 | Msa1019230 | -0.819777 | 9.719895e-53 | -8.615850e-47 |
| Msa0434090 | Msa1019230 | 0.816283 | 5.989629e-52 | -8.615850e-47 |
| Msa0437790 | Msa1019230 | -0.835126 | 2.011249e-56 | -8.615850e-47 |
| Msa0440720 | Msa1019230 | -0.802766 | 4.801473e-49 | -8.615850e-47 |
| Msa0448310 | Msa1019230 | 0.806679 | 7.317645e-50 | -8.615850e-47 |
| Msa0471020 | Msa1019230 | 0.822480 | 2.315930e-53 | -8.615850e-47 |
| Msa0471070 | Msa1019230 | 0.816872 | 4.420873e-52 | -8.615850e-47 |
| Msa0472570 | Msa1019230 | -0.802748 | 4.842984e-49 | -8.615850e-47 |
| Msa0477550 | Msa1019230 | -0.817588 | 3.050987e-52 | -8.615850e-47 |
| Msa0477900 | Msa1019230 | 0.800525 | 1.383764e-48 | -8.615850e-47 |
| Msa0478400 | Msa1019230 | 0.803248 | 3.817283e-49 | -8.615850e-47 |
| Msa0480430 | Msa1019230 | -0.802562 | 5.288214e-49 | -8.615850e-47 |
| Msa0481050 | Msa1019230 | -0.804615 | 1.983759e-49 | -8.615850e-47 |
| Msa1005370 | Msa1019230 | 0.819809 | 9.558655e-53 | -8.615850e-47 |
| Msa1019220 | Msa1019230 | 0.985062 | 2.065581e-162 | -8.615850e-47 |
| Msa1019230 | Msa1031060 | 0.824253 | 8.921938e-54 | -8.615850e-47 |
| Msa1019230 | Msa1036020 | 0.808199 | 3.483391e-50 | -8.615850e-47 |
| Msa1019230 | Msa1040330 | 0.803571 | 3.271041e-49 | -8.615850e-47 |
| Msa1019230 | Msa1047300 | 0.803553 | 3.299424e-49 | -8.615850e-47 |
| Msa1019230 | Msa1047340 | 0.803086 | 4.123022e-49 | -8.615850e-47 |
| Msa1019230 | Msa1063260 | 0.801027 | 1.092949e-48 | -8.615850e-47 |
| Msa1019230 | Msa1076280 | 0.819297 | 1.250905e-52 | -8.615850e-47 |
| Msa1019230 | Msa1078730 | 0.800537 | 1.375609e-48 | -8.615850e-47 |
| Msa1019230 | Msa1083130 | 0.808962 | 2.393433e-50 | -8.615850e-47 |
| Msa1019230 | Msa1084800 | 0.812789 | 3.551892e-51 | -8.615850e-47 |
| Msa1019230 | Msa1104130 | 0.983512 | 6.019046e-158 | -8.615850e-47 |
| Msa1019230 | Msa1119670 | 0.820327 | 7.273336e-53 | -8.615850e-47 |
| Msa1019230 | Msa1127900 | -0.800976 | 1.119562e-48 | -8.615850e-47 |
| Msa1019230 | Msa1131300 | -0.811395 | 7.152852e-51 | -8.615850e-47 |
| Msa1019230 | Msa1133440 | -0.815109 | 1.093868e-51 | -8.615850e-47 |
| Msa1019230 | Msa1143080 | 0.818002 | 2.459884e-52 | -8.615850e-47 |
| Msa1019230 | Msa1160540 | 0.818108 | 2.327808e-52 | -8.615850e-47 |
| Msa1019230 | Msa1165860 | 0.805725 | 1.162049e-49 | -8.615850e-47 |
| Msa1019230 | Msa1166040 | 0.807511 | 4.877769e-50 | -8.615850e-47 |
| Msa1019230 | Msa1211160 | 0.823250 | 1.532429e-53 | -8.615850e-47 |
| Msa1019230 | Msa1211320 | 0.801465 | 8.888918e-49 | -8.615850e-47 |
| Msa1019230 | Msa1215540 | -0.830138 | 3.475985e-55 | -8.615850e-47 |
| Msa1019230 | Msa1219780 | 0.810734 | 9.948751e-51 | -8.615850e-47 |
| Msa1019230 | Msa1220680 | -0.802659 | 5.051082e-49 | -8.615850e-47 |
| Msa1019230 | Msa1223540 | 0.800393 | 1.471656e-48 | -8.615850e-47 |
| Msa1019230 | Msa1223620 | 0.823427 | 1.393186e-53 | -8.615850e-47 |
| Msa1019230 | Msa1223960 | 0.822787 | 1.964887e-53 | -8.615850e-47 |
| Msa1019230 | Msa1223990 | 0.811967 | 5.371598e-51 | -8.615850e-47 |
| Msa1019230 | Msa1228350 | -0.806940 | 6.443763e-50 | -8.615850e-47 |
| Msa1019230 | Msa1228460 | -0.802373 | 5.784876e-49 | -8.615850e-47 |
| Msa1019230 | Msa1255710 | 0.805584 | 1.244005e-49 | -8.615850e-47 |
| Msa1019230 | Msa1258020 | 0.802974 | 4.347974e-49 | -8.615850e-47 |
| Msa1019230 | Msa1259570 | 0.801979 | 6.973600e-49 | -8.615850e-47 |
| Msa1019230 | Msa1263520 | 0.822095 | 2.845262e-53 | -8.615850e-47 |
| Msa1019230 | Msa1263590 | -0.821752 | 3.415562e-53 | -8.615850e-47 |
| Msa1019230 | Msa1263670 | -0.815643 | 8.320800e-52 | -8.615850e-47 |
| Msa1019230 | Msa1266710 | 0.802279 | 6.049144e-49 | -8.615850e-47 |
| Msa1019230 | Msa1268360 | 0.802723 | 4.899916e-49 | -8.615850e-47 |
| Msa1019230 | Msa1269730 | -0.819008 | 1.455050e-52 | -8.615850e-47 |
| Msa1019230 | Msa1272340 | -0.804101 | 2.539464e-49 | -8.615850e-47 |
| Msa1019230 | Msa1273320 | 0.832013 | 1.204564e-55 | -8.615850e-47 |
| Msa1019230 | Msa1280360 | 0.817214 | 3.703951e-52 | -8.615850e-47 |
| Msa1019230 | Msa1299310 | 0.805563 | 1.256558e-49 | -8.615850e-47 |
| Msa1019230 | Msa1310250 | -0.804679 | 1.924131e-49 | -8.615850e-47 |
| Msa1019230 | Msa1329770 | 0.800463 | 1.424221e-48 | -8.615850e-47 |
| Msa1019230 | Msa1335500 | 0.802847 | 4.619225e-49 | -8.615850e-47 |
| Msa1019230 | Msa1348330 | 0.823145 | 1.621899e-53 | -8.615850e-47 |
| Msa1019230 | Msa1349850 | -0.818505 | 1.892944e-52 | -8.615850e-47 |
| Msa1019230 | Msa1363690 | 0.853290 | 2.635628e-61 | -8.615850e-47 |
| Msa1019230 | Msa1373390 | -0.833574 | 4.931823e-56 | -8.615850e-47 |
| Msa1019230 | Msa1375780 | -0.807812 | 4.210073e-50 | -8.615850e-47 |
| Msa1019230 | Msa1377230 | 0.812768 | 3.589766e-51 | -8.615850e-47 |
| Msa1019230 | Msa1378950 | 0.849254 | 3.639355e-60 | -8.615850e-47 |
| Msa1019230 | Msa1387480 | 0.806441 | 8.212362e-50 | -8.615850e-47 |
| Msa1019230 | Msa1395720 | 0.831441 | 1.666033e-55 | -8.615850e-47 |
| Msa1019230 | Msa1396330 | 0.811496 | 6.801349e-51 | -8.615850e-47 |
| Msa1019230 | Msa1396550 | 0.855222 | 7.293344e-62 | -8.615850e-47 |
| Msa1019230 | Msa1401650 | 0.808045 | 3.755996e-50 | -8.615850e-47 |
| Msa1019230 | Msa1404810 | -0.807871 | 4.089818e-50 | -8.615850e-47 |
| Msa1019230 | Msa1407210 | 0.801727 | 7.853771e-49 | -8.615850e-47 |
| Msa1019230 | Msa1417220 | 0.814742 | 1.319448e-51 | -8.615850e-47 |
| Msa1019230 | Msa1441450 | 0.813810 | 2.120366e-51 | -8.615850e-47 |
| Msa1019230 | Msa1445780 | 0.881527 | 2.229703e-70 | -8.615850e-47 |
| Msa1019230 | Msa1451520 | 0.801002 | 1.105715e-48 | -8.615850e-47 |
| Msa1019230 | Msa1451690 | -0.815969 | 7.038248e-52 | -8.615850e-47 |
| Msa1019230 | Msa1453540 | -0.807835 | 4.163078e-50 | -8.615850e-47 |
| Msa1019230 | Msa1462610 | 0.813740 | 2.196299e-51 | -8.615850e-47 |
| Msa1019230 | Msa1466130 | 0.806685 | 7.294952e-50 | -8.615850e-47 |
| Msa0245660 | Msa1019230 | 0.808082 | 3.688119e-50 | -8.615850e-47 |
| Msa0253160 | Msa1019230 | -0.828123 | 1.070724e-54 | -8.615850e-47 |
| Msa0264230 | Msa1019230 | 0.806918 | 6.512111e-50 | -8.615850e-47 |
| Msa0264710 | Msa1019230 | 0.806386 | 8.437066e-50 | -8.615850e-47 |
| Msa0269240 | Msa1019230 | 0.824520 | 7.720232e-54 | -8.615850e-47 |
| Msa0291940 | Msa1019230 | -0.829583 | 4.746656e-55 | -8.615850e-47 |
| Msa0307630 | Msa1019230 | 0.809392 | 1.935425e-50 | -8.615850e-47 |
| Msa0311910 | Msa1019230 | -0.829420 | 5.200604e-55 | -8.615850e-47 |
| Msa0329910 | Msa1019230 | -0.836284 | 1.023814e-56 | -8.615850e-47 |
| Msa0336640 | Msa1019230 | 0.802572 | 5.263598e-49 | -8.615850e-47 |
| Msa0343260 | Msa1019230 | 0.816555 | 5.206097e-52 | -8.615850e-47 |
| Msa0485210 | Msa1019230 | -0.805953 | 1.040716e-49 | -8.615850e-47 |
| Msa0500490 | Msa1019230 | -0.801988 | 6.942839e-49 | -8.615850e-47 |
| Msa0502940 | Msa1019230 | 0.801553 | 8.527165e-49 | -8.615850e-47 |
| Msa0504360 | Msa1019230 | -0.809115 | 2.219323e-50 | -8.615850e-47 |
| Msa0514650 | Msa1019230 | 0.815337 | 9.734493e-52 | -8.615850e-47 |
| Msa0515820 | Msa1019230 | 0.818404 | 1.995724e-52 | -8.615850e-47 |
| Msa0521940 | Msa1019230 | 0.810646 | 1.039516e-50 | -8.615850e-47 |
| Msa0524960 | Msa1019230 | -0.801207 | 1.003838e-48 | -8.615850e-47 |
| Msa0568920 | Msa1019230 | 0.831139 | 1.976648e-55 | -8.615850e-47 |
| Msa0575380 | Msa1019230 | 0.833646 | 4.732417e-56 | -8.615850e-47 |
| Msa0581210 | Msa1019230 | 0.807483 | 4.944251e-50 | -8.615850e-47 |
| Msa0581570 | Msa1019230 | 0.828836 | 7.203867e-55 | -8.615850e-47 |
| Msa0901660 | Msa1019230 | -0.800410 | 1.460204e-48 | -8.615850e-47 |
| Msa0910590 | Msa1019230 | 0.806102 | 9.683848e-50 | -8.615850e-47 |
| Msa0913500 | Msa1019230 | 0.805013 | 1.638428e-49 | -8.615850e-47 |
| Msa0930950 | Msa1019230 | -0.821547 | 3.811143e-53 | -8.615850e-47 |
| Msa0931750 | Msa1019230 | 0.814927 | 1.200858e-51 | -8.615850e-47 |
| Msa0951060 | Msa1019230 | 0.808279 | 3.348626e-50 | -8.615850e-47 |
| Msa0963290 | Msa1019230 | 0.816527 | 5.281505e-52 | -8.615850e-47 |
| Msa0975550 | Msa1019230 | -0.828319 | 9.604277e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1019230 | MtrunA17_Chr7g0234761 | 87.430 | 533 | 33 | 5 | 1 | 515 | 1 | 517 | 0.0 | 913 |
| Msa1019230 | MtrunA17_Chr8g0339091 | 57.977 | 514 | 139 | 16 | 38 | 512 | 15 | 490 | 1.10e-164 | 476 |
| Msa1019230 | MtrunA17_Chr5g0421111 | 46.632 | 193 | 89 | 6 | 319 | 510 | 369 | 548 | 1.33e-37 | 145 |
| Msa1019230 | MtrunA17_Chr1g0152131 | 32.533 | 375 | 190 | 11 | 105 | 442 | 74 | 422 | 4.75e-37 | 141 |
| Msa1019230 | MtrunA17_Chr8g0365941 | 37.329 | 292 | 130 | 11 | 142 | 403 | 125 | 393 | 1.26e-35 | 138 |
| Msa1019230 | MtrunA17_Chr4g0035101 | 49.123 | 171 | 72 | 4 | 241 | 405 | 72 | 233 | 7.37e-34 | 131 |
| Msa1019230 | MtrunA17_Chr8g0363921 | 44.845 | 194 | 91 | 5 | 242 | 422 | 75 | 265 | 6.49e-33 | 126 |
| Msa1019230 | MtrunA17_Chr3g0144641 | 36.786 | 280 | 136 | 10 | 241 | 509 | 138 | 387 | 1.47e-32 | 128 |
| Msa1019230 | MtrunA17_Chr7g0258161 | 52.632 | 114 | 43 | 3 | 330 | 434 | 188 | 299 | 3.27e-27 | 112 |
| Msa1019230 | MtrunA17_Chr8g0385911 | 64.045 | 89 | 29 | 2 | 330 | 415 | 160 | 248 | 1.12e-26 | 110 |
| Msa1019230 | MtrunA17_Chr5g0415291 | 47.518 | 141 | 63 | 3 | 266 | 403 | 68 | 200 | 1.33e-25 | 105 |
| Msa1019230 | MtrunA17_Chr3g0131771 | 87.719 | 57 | 7 | 0 | 330 | 386 | 162 | 218 | 6.27e-25 | 105 |
| Msa1019230 | MtrunA17_Chr1g0174161 | 51.485 | 101 | 44 | 2 | 319 | 414 | 164 | 264 | 2.03e-24 | 103 |
| Msa1019230 | MtrunA17_Chr6g0484271 | 38.690 | 168 | 84 | 5 | 233 | 395 | 82 | 235 | 6.36e-22 | 95.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1019230 | AT3G07340.1 | 43.487 | 522 | 214 | 17 | 1 | 514 | 1 | 449 | 2.83e-109 | 333 |
| Msa1019230 | AT3G07340.2 | 42.740 | 489 | 203 | 15 | 1 | 481 | 1 | 420 | 3.48e-98 | 304 |
| Msa1019230 | AT5G48560.1 | 42.831 | 537 | 218 | 22 | 1 | 497 | 1 | 488 | 4.24e-82 | 264 |
| Msa1019230 | AT5G48560.2 | 42.607 | 514 | 207 | 21 | 1 | 474 | 1 | 466 | 2.57e-75 | 245 |
| Msa1019230 | AT1G68920.3 | 35.890 | 326 | 167 | 8 | 122 | 414 | 97 | 413 | 2.38e-41 | 155 |
| Msa1019230 | AT1G68920.1 | 36.086 | 327 | 166 | 8 | 122 | 414 | 97 | 414 | 2.86e-41 | 155 |
| Msa1019230 | AT1G68920.4 | 36.086 | 327 | 166 | 8 | 122 | 414 | 97 | 414 | 2.86e-41 | 155 |
| Msa1019230 | AT1G68920.2 | 36.086 | 327 | 166 | 8 | 122 | 414 | 97 | 414 | 2.86e-41 | 155 |
| Msa1019230 | AT1G26260.4 | 37.857 | 280 | 143 | 8 | 137 | 414 | 68 | 318 | 4.96e-37 | 141 |
| Msa1019230 | AT1G26260.1 | 37.857 | 280 | 143 | 8 | 137 | 414 | 68 | 318 | 4.96e-37 | 141 |
| Msa1019230 | AT1G26260.6 | 37.857 | 280 | 143 | 8 | 137 | 414 | 68 | 318 | 4.96e-37 | 141 |
| Msa1019230 | AT1G26260.2 | 37.857 | 280 | 143 | 8 | 137 | 414 | 68 | 318 | 4.96e-37 | 141 |
| Msa1019230 | AT3G23690.1 | 39.464 | 261 | 122 | 8 | 242 | 493 | 113 | 346 | 1.00e-35 | 137 |
| Msa1019230 | AT1G26260.5 | 38.346 | 266 | 133 | 8 | 151 | 414 | 60 | 296 | 5.72e-34 | 132 |
| Msa1019230 | AT1G26260.3 | 66.667 | 96 | 28 | 1 | 319 | 414 | 176 | 267 | 9.18e-33 | 128 |
| Msa1019230 | AT1G10120.2 | 67.045 | 88 | 29 | 0 | 319 | 406 | 210 | 297 | 4.41e-32 | 127 |
| Msa1019230 | AT1G10120.1 | 67.045 | 88 | 29 | 0 | 319 | 406 | 210 | 297 | 4.41e-32 | 127 |
| Msa1019230 | AT1G59640.1 | 43.523 | 193 | 73 | 7 | 248 | 434 | 71 | 233 | 4.23e-30 | 119 |
| Msa1019230 | AT2G18300.1 | 42.077 | 183 | 86 | 5 | 242 | 416 | 123 | 293 | 2.62e-29 | 118 |
| Msa1019230 | AT4G34530.1 | 67.470 | 83 | 27 | 0 | 319 | 401 | 176 | 258 | 3.19e-29 | 118 |
| Msa1019230 | AT2G18300.2 | 43.011 | 186 | 82 | 7 | 242 | 416 | 123 | 295 | 5.51e-29 | 117 |
| Msa1019230 | AT2G18300.3 | 43.011 | 186 | 82 | 7 | 242 | 416 | 123 | 295 | 1.02e-28 | 117 |
| Msa1019230 | AT1G59640.2 | 47.500 | 160 | 70 | 5 | 248 | 401 | 71 | 222 | 3.99e-27 | 112 |
| Msa1019230 | AT4G36540.2 | 47.183 | 142 | 55 | 3 | 275 | 402 | 93 | 228 | 8.61e-27 | 110 |
| Msa1019230 | AT4G36540.1 | 47.917 | 144 | 54 | 4 | 275 | 404 | 93 | 229 | 1.64e-26 | 109 |
| Msa1019230 | AT2G42300.4 | 62.500 | 72 | 27 | 0 | 330 | 401 | 200 | 271 | 1.26e-25 | 106 |
| Msa1019230 | AT2G42300.1 | 54.902 | 102 | 36 | 3 | 330 | 431 | 200 | 291 | 2.57e-25 | 107 |
| Msa1019230 | AT3G57800.2 | 47.581 | 124 | 50 | 3 | 319 | 431 | 208 | 327 | 3.43e-25 | 107 |
| Msa1019230 | AT5G50915.3 | 54.545 | 110 | 36 | 4 | 330 | 425 | 151 | 260 | 1.47e-24 | 103 |
| Msa1019230 | AT5G50915.4 | 54.545 | 110 | 36 | 4 | 330 | 425 | 151 | 260 | 1.47e-24 | 103 |
| Msa1019230 | AT5G50915.1 | 50.400 | 125 | 48 | 4 | 319 | 429 | 140 | 264 | 1.51e-24 | 103 |
| Msa1019230 | AT5G50915.2 | 50.400 | 125 | 48 | 4 | 319 | 429 | 140 | 264 | 1.51e-24 | 103 |
| Msa1019230 | AT5G62610.2 | 48.760 | 121 | 56 | 1 | 267 | 387 | 111 | 225 | 6.26e-24 | 102 |
| Msa1019230 | AT5G62610.1 | 48.760 | 121 | 56 | 1 | 267 | 387 | 111 | 225 | 6.26e-24 | 102 |
| Msa1019230 | AT1G73830.2 | 66.667 | 66 | 22 | 0 | 330 | 395 | 162 | 227 | 1.37e-21 | 94.7 |
| Msa1019230 | AT1G73830.1 | 66.667 | 66 | 22 | 0 | 330 | 395 | 162 | 227 | 1.44e-21 | 94.7 |
| Msa1019230 | AT1G25330.1 | 56.250 | 80 | 35 | 0 | 327 | 406 | 116 | 195 | 2.37e-21 | 93.2 |
| Msa1019230 | AT1G18400.2 | 65.152 | 66 | 23 | 0 | 330 | 395 | 160 | 225 | 4.33e-21 | 92.8 |
| Msa1019230 | AT1G18400.1 | 65.152 | 66 | 23 | 0 | 330 | 395 | 160 | 225 | 5.95e-21 | 92.8 |
| Msa1019230 | AT3G57800.1 | 34.503 | 171 | 50 | 4 | 319 | 431 | 208 | 374 | 2.35e-17 | 84.7 |
| Msa1019230 | AT4G28800.1 | 34.074 | 135 | 68 | 5 | 248 | 379 | 196 | 312 | 7.79e-11 | 64.7 |
Find 134 sgRNAs with CRISPR-Local
Find 225 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTCCAGATTCTTATTATTA+TGG | 0.191721 | 7_1:+40574131 | Msa1019230:three_prime_UTR |
| AGAGAATTGATTGGTAAATT+AGG | 0.220575 | 7_1:+40571119 | Msa1019230:CDS |
| TTCCATTAAGGAAAAGATTA+AGG | 0.223192 | 7_1:-40570847 | None:intergenic |
| GCAGTTCCTATCTATGAAAT+TGG | 0.223353 | 7_1:+40572719 | Msa1019230:intron |
| TCAAAGATCTACTCCATTAT+TGG | 0.223521 | 7_1:+40571394 | Msa1019230:CDS |
| TCCTCAGCACCATCCTATTA+TGG | 0.234641 | 7_1:+40572952 | Msa1019230:CDS |
| CTATTCACTGTAAAATCTTT+AGG | 0.253555 | 7_1:+40574087 | Msa1019230:three_prime_UTR |
| TCTACTCCATTATTGGAAAA+TGG | 0.261666 | 7_1:+40571401 | Msa1019230:CDS |
| ACATCAACAAGAAATTTAAT+TGG | 0.262134 | 7_1:+40573884 | Msa1019230:three_prime_UTR |
| GTTTCAATCAAATAATTCTT+TGG | 0.281320 | 7_1:+40572906 | Msa1019230:CDS |
| GGACTCAACCTTGTTCTTGC+TGG | 0.285071 | 7_1:+40570523 | None:intergenic |
| GAGGAATCTAATGGGAATAT+TGG | 0.295383 | 7_1:-40572934 | None:intergenic |
| ATTCATCTTTGCTTCAATTC+AGG | 0.297404 | 7_1:-40573843 | None:intergenic |
| ATAAGTGCATGCCAAGGTTT+TGG | 0.306516 | 7_1:-40573068 | None:intergenic |
| TGAGATATAGTGCTAATTAA+AGG | 0.306822 | 7_1:+40574163 | Msa1019230:three_prime_UTR |
| ACTAGAAGTTGAAGTTTCTT+TGG | 0.309086 | 7_1:-40571624 | None:intergenic |
| ACAATTGTTCAGATGGGATT+TGG | 0.313660 | 7_1:+40573618 | Msa1019230:CDS |
| ATTCACAATAATATTTCTAA+TGG | 0.321191 | 7_1:+40573000 | Msa1019230:CDS |
| ATGAATGAAAGATGTAAATT+TGG | 0.324289 | 7_1:-40570690 | None:intergenic |
| TTCTGCAACAGTTGAATTCA+TGG | 0.325717 | 7_1:-40571276 | None:intergenic |
| GAATCAACAATCTCTGAAAA+TGG | 0.326758 | 7_1:+40571542 | Msa1019230:CDS |
| ATTGTTGAGATGTTCAATTT+TGG | 0.329946 | 7_1:-40571251 | None:intergenic |
| GAAATATTATTGTGAATTGC+TGG | 0.332246 | 7_1:-40572994 | None:intergenic |
| CTTCTCCTTATGTGAATTCA+AGG | 0.338861 | 7_1:+40571573 | Msa1019230:CDS |
| TCATCTTCAGAGAATGTTAA+TGG | 0.340270 | 7_1:-40573588 | None:intergenic |
| TCTTGTCCCTGGTTGCAATA+AGG | 0.355254 | 7_1:+40572302 | Msa1019230:CDS |
| TGATCAAAGCTTAATTTCAT+AGG | 0.358785 | 7_1:-40573808 | None:intergenic |
| TGGCATAAACCACCATCTAA+TGG | 0.361230 | 7_1:-40573048 | None:intergenic |
| GCTGCAAAATTCTCTTGCTT+TGG | 0.361360 | 7_1:+40571329 | Msa1019230:CDS |
| AGGGGTACAAATAGTAATAA+TGG | 0.364388 | 7_1:+40571860 | Msa1019230:CDS |
| GAATTGTTCTACTCAATTGC+AGG | 0.367833 | 7_1:+40571490 | Msa1019230:CDS |
| GGCATAAACCACCATCTAAT+GGG | 0.369801 | 7_1:-40573047 | None:intergenic |
| CAGTGGCCAATTTCATAGAT+AGG | 0.382519 | 7_1:-40572725 | None:intergenic |
| ATTGATGTAGTTGTGATGGG+GGG | 0.388308 | 7_1:-40570562 | None:intergenic |
| CATTTGATTAAAGATTGAAT+TGG | 0.392918 | 7_1:-40570730 | None:intergenic |
| CCTCAGCACCATCCTATTAT+GGG | 0.394260 | 7_1:+40572953 | Msa1019230:CDS |
| GTGCCATAATAATAAGAATC+TGG | 0.403656 | 7_1:-40574134 | None:intergenic |
| AGGAATCTAATGGGAATATT+GGG | 0.404291 | 7_1:-40572933 | None:intergenic |
| GATCCAAGTTCTTTCAATGA+TGG | 0.405954 | 7_1:-40571449 | None:intergenic |
| AATTCTCTTGCTTTGGAAGT+AGG | 0.408436 | 7_1:+40571336 | Msa1019230:CDS |
| TTCAAATTATGAAATTGTAT+TGG | 0.408593 | 7_1:-40573663 | None:intergenic |
| CTGGTGTTGTTGCCCATAAT+AGG | 0.412733 | 7_1:-40572965 | None:intergenic |
| ATCTTGATTCTGTATTCTGT+TGG | 0.413340 | 7_1:+40574110 | Msa1019230:three_prime_UTR |
| GATGGTGCTGAGGAATCTAA+TGG | 0.422338 | 7_1:-40572943 | None:intergenic |
| GTTGTTGACTTATCCCATAT+TGG | 0.422874 | 7_1:-40570999 | None:intergenic |
| GCAGAATTCTCAACTGATCC+TGG | 0.423123 | 7_1:+40571293 | Msa1019230:CDS |
| TATTATTCCTTCTAGGTCAC+TGG | 0.424071 | 7_1:+40572400 | Msa1019230:intron |
| TGATTCAGCACTTAGTTCAA+TGG | 0.424451 | 7_1:+40571043 | Msa1019230:CDS |
| CTAAGTGGATTTAATGAAGC+TGG | 0.440757 | 7_1:+40573096 | Msa1019230:CDS |
| GATCAAAGCTTAATTTCATA+GGG | 0.441448 | 7_1:-40573807 | None:intergenic |
| TTTGTCATCAGAGAATTGAT+TGG | 0.446145 | 7_1:+40571110 | Msa1019230:CDS |
| ATTGGTAAATTAGGAAACAT+TGG | 0.447086 | 7_1:+40571128 | Msa1019230:CDS |
| AACTCAGTGGACCCATTAGA+TGG | 0.450062 | 7_1:+40573036 | Msa1019230:CDS |
| GAATTGAAGCAAAGATGAAT+AGG | 0.450877 | 7_1:+40573846 | Msa1019230:three_prime_UTR |
| TTAGCACTATATCTCACAAT+TGG | 0.451268 | 7_1:-40574156 | None:intergenic |
| AATAATTGACAAAGTGAAGA+TGG | 0.455330 | 7_1:-40574210 | None:intergenic |
| AAGCAGAGGAAGAATCAAAA+GGG | 0.459158 | 7_1:+40571841 | Msa1019230:CDS |
| ATGTAATCCTTTGGTGCCTC+AGG | 0.463142 | 7_1:-40571920 | None:intergenic |
| AGTCCATCATTGAAAGAACT+TGG | 0.466629 | 7_1:+40571446 | Msa1019230:CDS |
| AAAATTGTCATTTGACATGT+TGG | 0.469622 | 7_1:-40571090 | None:intergenic |
| AAGTGAAGATGGATAATGAT+AGG | 0.471377 | 7_1:-40574199 | None:intergenic |
| AAAGCAGAGGAAGAATCAAA+AGG | 0.471506 | 7_1:+40571840 | Msa1019230:CDS |
| CTGACATGAATGTAATCCTT+TGG | 0.473631 | 7_1:-40571929 | None:intergenic |
| AATGAAAAGCTAAGGAAAAG+TGG | 0.474413 | 7_1:-40570611 | None:intergenic |
| TAATGGGTCCACTGAGTTGT+GGG | 0.475871 | 7_1:-40573031 | None:intergenic |
| TTCAATTCAGGCGTAATGAA+TGG | 0.481544 | 7_1:-40573831 | None:intergenic |
| AAATATTATTGTGAATTGCT+GGG | 0.490799 | 7_1:-40572993 | None:intergenic |
| ATGAAAAGCTAAGGAAAAGT+GGG | 0.495022 | 7_1:-40570610 | None:intergenic |
| CTAATGGGTCCACTGAGTTG+TGG | 0.497924 | 7_1:-40573032 | None:intergenic |
| ATGGCTTAATGATAATACAT+AGG | 0.504133 | 7_1:-40573913 | None:intergenic |
| CCTCAACACAATTGTTCAGA+TGG | 0.508498 | 7_1:+40573611 | Msa1019230:CDS |
| GTGGGATATGAGTGGAAAGG+AGG | 0.512720 | 7_1:-40570668 | None:intergenic |
| GATTGATGTAGTTGTGATGG+GGG | 0.513050 | 7_1:-40570563 | None:intergenic |
| CTTGAATTCACATAAGGAGA+AGG | 0.513147 | 7_1:-40571572 | None:intergenic |
| GCAGCTCTTTCTGCAAAACC+AGG | 0.515215 | 7_1:-40571311 | None:intergenic |
| GTGGAAAGGAGGGTGTGAAA+AGG | 0.515484 | 7_1:-40570657 | None:intergenic |
| TTTGGAAGTAGGAGTTTCAA+TGG | 0.516264 | 7_1:+40571347 | Msa1019230:CDS |
| GGGATTGATGTAGTTGTGAT+GGG | 0.523095 | 7_1:-40570565 | None:intergenic |
| GGATTGATGTAGTTGTGATG+GGG | 0.527217 | 7_1:-40570564 | None:intergenic |
| TTGATGTAGTTGTGATGGGG+GGG | 0.530546 | 7_1:-40570561 | None:intergenic |
| AATGAAAGATGTAAATTTGG+TGG | 0.531045 | 7_1:-40570687 | None:intergenic |
| TGGCTTAATGATAATACATA+GGG | 0.531706 | 7_1:-40573912 | None:intergenic |
| AAAAGAAAAGTTTCTTCCAA+AGG | 0.532200 | 7_1:+40571596 | Msa1019230:CDS |
| GGAAGATGTAATGTATCAGT+TGG | 0.539889 | 7_1:-40570636 | None:intergenic |
| TGATGAGATCTCACAAACAT+TGG | 0.547828 | 7_1:+40571160 | Msa1019230:CDS |
| ATACAATTTCATAATTTGAA+CGG | 0.549604 | 7_1:+40573666 | Msa1019230:CDS |
| AACCATCTTCAATGCCTACA+TGG | 0.550038 | 7_1:+40570931 | Msa1019230:CDS |
| CTTCTACAAGATCTTGTCCC+TGG | 0.550938 | 7_1:+40572291 | Msa1019230:CDS |
| ATTTAATGAAGCTGGCTCAC+AGG | 0.551026 | 7_1:+40573104 | Msa1019230:CDS |
| GGGGATTGATGTAGTTGTGA+TGG | 0.551189 | 7_1:-40570566 | None:intergenic |
| CTCAATACTAAAATCCACCT+TGG | 0.554681 | 7_1:-40572754 | None:intergenic |
| AAGCGTATGAAAACAAATGA+AGG | 0.556302 | 7_1:+40571792 | Msa1019230:CDS |
| AGATAACATGAAGACAAAAG+AGG | 0.556765 | 7_1:-40573969 | None:intergenic |
| ATGGTGCTGAGGAATCTAAT+GGG | 0.559576 | 7_1:-40572942 | None:intergenic |
| TTAAAATCATGGAAAGTGAA+AGG | 0.560569 | 7_1:-40574007 | None:intergenic |
| GGAGGGAGAAAATCAGTGAA+AGG | 0.560766 | 7_1:+40572262 | Msa1019230:CDS |
| GATGAAAGTGATTGCCATGT+AGG | 0.566700 | 7_1:-40570945 | None:intergenic |
| TAATCCTTTGGTGCCTCAGG+AGG | 0.569593 | 7_1:-40571917 | None:intergenic |
| TACCAACCTTATTGCAACCA+GGG | 0.572746 | 7_1:-40572308 | None:intergenic |
| TGGGATATGAGTGGAAAGGA+GGG | 0.574948 | 7_1:-40570667 | None:intergenic |
| AGTTGGTAAATGAAAAGCTA+AGG | 0.575953 | 7_1:-40570619 | None:intergenic |
| ATCATTGCAGCGTCAAGTTG+AGG | 0.580066 | 7_1:+40572462 | Msa1019230:CDS |
| AAAACCTCCTGAGGCACCAA+AGG | 0.580225 | 7_1:+40571913 | Msa1019230:CDS |
| ATGCACTTATCTTCACTAAG+TGG | 0.581033 | 7_1:+40573081 | Msa1019230:CDS |
| CTCAACACAATTGTTCAGAT+GGG | 0.581106 | 7_1:+40573612 | Msa1019230:CDS |
| GGTGGTTTATGCCAAAACCT+TGG | 0.587041 | 7_1:+40573057 | Msa1019230:CDS |
| TGCCATGTAGGCATTGAAGA+TGG | 0.593613 | 7_1:-40570933 | None:intergenic |
| ATGAAAGATGTAAATTTGGT+GGG | 0.596114 | 7_1:-40570686 | None:intergenic |
| AACTTCTAGTAACCCTGCAA+TGG | 0.607773 | 7_1:+40571637 | Msa1019230:CDS |
| TTACCAACCTTATTGCAACC+AGG | 0.614090 | 7_1:-40572309 | None:intergenic |
| AGAGAGATCCAGCAAGAACA+AGG | 0.616539 | 7_1:-40570531 | None:intergenic |
| GGTACAAATAGTAATAATGG+AGG | 0.620197 | 7_1:+40571863 | Msa1019230:CDS |
| ATGTTGGAATTTGAAGCTGC+AGG | 0.621377 | 7_1:-40571074 | None:intergenic |
| CCATCTGAACAATTGTGTTG+AGG | 0.622085 | 7_1:-40573611 | None:intergenic |
| AAAATTGAACATCTCAACAA+TGG | 0.629044 | 7_1:+40571253 | Msa1019230:CDS |
| TGAAAAGCTAAGGAAAAGTG+GGG | 0.633223 | 7_1:-40570609 | None:intergenic |
| TAAATTTGGTGGGATATGAG+TGG | 0.635559 | 7_1:-40570676 | None:intergenic |
| TGATCAAAATGATGTTGAGG+TGG | 0.637803 | 7_1:-40570903 | None:intergenic |
| TGTTGTTGCCCATAATAGGA+TGG | 0.639120 | 7_1:-40572961 | None:intergenic |
| GATTGATCAAAATGATGTTG+AGG | 0.642732 | 7_1:-40570906 | None:intergenic |
| GTGAAGATAAGTGCATGCCA+AGG | 0.643919 | 7_1:-40573074 | None:intergenic |
| AAATGGTAAAGTAAAAGCAG+AGG | 0.646618 | 7_1:+40571827 | Msa1019230:CDS |
| ATTCATGTCAGAGCAAGAAG+AGG | 0.647303 | 7_1:+40571941 | Msa1019230:CDS |
| TTGGTGGGATATGAGTGGAA+AGG | 0.655839 | 7_1:-40570671 | None:intergenic |
| GAGCAATTCAAAACCTCCTG+AGG | 0.656462 | 7_1:+40571904 | Msa1019230:CDS |
| CCCATAATAGGATGGTGCTG+AGG | 0.665748 | 7_1:-40572953 | None:intergenic |
| TGAAGATGGATAATGATAGG+TGG | 0.669243 | 7_1:-40574196 | None:intergenic |
| AGCAGAGGAAGAATCAAAAG+GGG | 0.672406 | 7_1:+40571842 | Msa1019230:CDS |
| ATCAAAGCTTAATTTCATAG+GGG | 0.673297 | 7_1:-40573806 | None:intergenic |
| AACTGTGACCCACAACTCAG+TGG | 0.673850 | 7_1:+40573023 | Msa1019230:CDS |
| TCAGTGGACCCATTAGATGG+TGG | 0.680214 | 7_1:+40573039 | Msa1019230:CDS |
| ATCCACCTTGGTGTTAACAG+TGG | 0.694539 | 7_1:-40572742 | None:intergenic |
| ATTGGCCACTGTTAACACCA+AGG | 0.721123 | 7_1:+40572737 | Msa1019230:CDS |
| GGCCACTGTTAACACCAAGG+TGG | 0.728183 | 7_1:+40572740 | Msa1019230:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATAATAATAATAATAA+TGG | - | chr7_1:40573935-40573954 | None:intergenic | 0.0% |
| !! | TTATTATTATTATTATAATT+AGG | + | chr7_1:40573935-40573954 | Msa1019230:three_prime_UTR | 0.0% |
| !! | TTGAAAAATTAATTTATTGA+AGG | - | chr7_1:40570806-40570825 | None:intergenic | 10.0% |
| !! | AATAAAGTTAATTGTATTAT+AGG | + | chr7_1:40573149-40573168 | Msa1019230:intron | 10.0% |
| !! | ATAAAGTTAATTGTATTATA+GGG | + | chr7_1:40573150-40573169 | Msa1019230:intron | 10.0% |
| !!! | ATTTTTTATAAATGATTAGA+TGG | - | chr7_1:40573273-40573292 | None:intergenic | 10.0% |
| !!! | CAACATAATTTTTTTTTATA+AGG | - | chr7_1:40573745-40573764 | None:intergenic | 10.0% |
| !! | AGATAAAAAAATTAAAATCA+TGG | - | chr7_1:40574021-40574040 | None:intergenic | 10.0% |
| !!! | TGATTTTAATTTTTTTATCT+TGG | + | chr7_1:40574021-40574040 | Msa1019230:three_prime_UTR | 10.0% |
| !!! | GATTTTAATTTTTTTATCTT+GGG | + | chr7_1:40574022-40574041 | Msa1019230:three_prime_UTR | 10.0% |
| !!! | ATTTTAATTTTTTTATCTTG+GGG | + | chr7_1:40574023-40574042 | Msa1019230:three_prime_UTR | 10.0% |
| !! | AATGACTAATTTAATTAAGA+GGG | - | chr7_1:40571700-40571719 | None:intergenic | 15.0% |
| !! | AAATGACTAATTTAATTAAG+AGG | - | chr7_1:40571701-40571720 | None:intergenic | 15.0% |
| !!! | TGTAAACTAATTTTTGTTAT+AGG | + | chr7_1:40572236-40572255 | Msa1019230:intron | 15.0% |
| !! | GGTAATAATTAGATAAATTA+AGG | + | chr7_1:40572327-40572346 | Msa1019230:intron | 15.0% |
| !! | TTGTTTATATTATAAATTGG+AGG | + | chr7_1:40572608-40572627 | Msa1019230:intron | 15.0% |
| !! | TGTTTATATTATAAATTGGA+GGG | + | chr7_1:40572609-40572628 | Msa1019230:intron | 15.0% |
| !!! | ATTCACAATAATATTTCTAA+TGG | + | chr7_1:40573000-40573019 | Msa1019230:CDS | 15.0% |
| !!! | ACATTTTAACTTTACAAATT+AGG | - | chr7_1:40573247-40573266 | None:intergenic | 15.0% |
| !!! | TAATTTGTAAAGTTAAAATG+TGG | + | chr7_1:40573246-40573265 | Msa1019230:intron | 15.0% |
| !! | TTATAATAATTCATACGATT+TGG | - | chr7_1:40573296-40573315 | None:intergenic | 15.0% |
| !! | TTCAAATTATGAAATTGTAT+TGG | - | chr7_1:40573666-40573685 | None:intergenic | 15.0% |
| !! | ATACAATTTCATAATTTGAA+CGG | + | chr7_1:40573666-40573685 | Msa1019230:CDS | 15.0% |
| !!! | AACATATACTTTTTTATGTT+TGG | - | chr7_1:40573699-40573718 | None:intergenic | 15.0% |
| !!! | TTTTAATTTTTTTATCTTGG+GGG | + | chr7_1:40574024-40574043 | Msa1019230:three_prime_UTR | 15.0% |
| !!! | ATTCATAAAAAGAATTTTGA+TGG | + | chr7_1:40574266-40574285 | Msa1019230:three_prime_UTR | 15.0% |
| !!! | TTCATAAAAAGAATTTTGAT+GGG | + | chr7_1:40574267-40574286 | Msa1019230:three_prime_UTR | 15.0% |
| !! | ATGAATGAAAGATGTAAATT+TGG | - | chr7_1:40570693-40570712 | None:intergenic | 20.0% |
| !! | CATTTGATTAAAGATTGAAT+TGG | - | chr7_1:40570733-40570752 | None:intergenic | 20.0% |
| !!! | AAAGAATTGATTTTCCATTA+AGG | - | chr7_1:40570862-40570881 | None:intergenic | 20.0% |
| !! | TTTCATATTCTAAATCCAAA+AGG | + | chr7_1:40571718-40571737 | Msa1019230:intron | 20.0% |
| !! | TTCATATTCTAAATCCAAAA+GGG | + | chr7_1:40571719-40571738 | Msa1019230:intron | 20.0% |
| !!! | CATTTTTGTTTTTGCAATAT+AGG | + | chr7_1:40571743-40571762 | Msa1019230:intron | 20.0% |
| !!! | ACTAATTTTTGTTATAGGTT+AGG | + | chr7_1:40572241-40572260 | Msa1019230:intron | 20.0% |
| !! | TATGAATTATTATTCCTTCT+AGG | + | chr7_1:40572393-40572412 | Msa1019230:intron | 20.0% |
| !!! | GCATACATAACAATTTTATT+TGG | + | chr7_1:40572520-40572539 | Msa1019230:intron | 20.0% |
| !!! | TCAATTTGTTGACTTTTTTT+TGG | + | chr7_1:40572869-40572888 | Msa1019230:intron | 20.0% |
| !! | GTTTCAATCAAATAATTCTT+TGG | + | chr7_1:40572906-40572925 | Msa1019230:CDS | 20.0% |
| !! | AAATATTATTGTGAATTGCT+GGG | - | chr7_1:40572996-40573015 | None:intergenic | 20.0% |
| !! | TACTGAAAAATGAAAATCAT+TGG | - | chr7_1:40573567-40573586 | None:intergenic | 20.0% |
| !! | ACATCAACAAGAAATTTAAT+TGG | + | chr7_1:40573884-40573903 | Msa1019230:three_prime_UTR | 20.0% |
| ! | ATGAAAGATGTAAATTTGGT+GGG | - | chr7_1:40570689-40570708 | None:intergenic | 25.0% |
| ! | AATGAAAGATGTAAATTTGG+TGG | - | chr7_1:40570690-40570709 | None:intergenic | 25.0% |
| !! | ATCCTTAATCTTTTCCTTAA+TGG | + | chr7_1:40570845-40570864 | Msa1019230:exon | 25.0% |
| ! | TTCCATTAAGGAAAAGATTA+AGG | - | chr7_1:40570850-40570869 | None:intergenic | 25.0% |
| !!! | ATTGTTTTTACACACCAATA+TGG | + | chr7_1:40570985-40571004 | Msa1019230:CDS | 25.0% |
| !!! | TTGTTTTTACACACCAATAT+GGG | + | chr7_1:40570986-40571005 | Msa1019230:CDS | 25.0% |
| !! | AAAATTGTCATTTGACATGT+TGG | - | chr7_1:40571093-40571112 | None:intergenic | 25.0% |
| ! | AGAGAATTGATTGGTAAATT+AGG | + | chr7_1:40571119-40571138 | Msa1019230:CDS | 25.0% |
| ! | ATTGGTAAATTAGGAAACAT+TGG | + | chr7_1:40571128-40571147 | Msa1019230:CDS | 25.0% |
| !! | ATTGTTGAGATGTTCAATTT+TGG | - | chr7_1:40571254-40571273 | None:intergenic | 25.0% |
| ! | AAAATTGAACATCTCAACAA+TGG | + | chr7_1:40571253-40571272 | Msa1019230:CDS | 25.0% |
| !! | AGTTTTCCATTTTCCAATAA+TGG | - | chr7_1:40571410-40571429 | None:intergenic | 25.0% |
| ! | AAAAGAAAAGTTTCTTCCAA+AGG | + | chr7_1:40571596-40571615 | Msa1019230:CDS | 25.0% |
| !!! | ATTTTTAACTTACCATTGCA+GGG | - | chr7_1:40571652-40571671 | None:intergenic | 25.0% |
| !!! | AATTTTTAACTTACCATTGC+AGG | - | chr7_1:40571653-40571672 | None:intergenic | 25.0% |
| !! | AAAAACAAAAATGACCCTTT+TGG | - | chr7_1:40571736-40571755 | None:intergenic | 25.0% |
| ! | GAAGGTGAAAAAATTGAAAA+TGG | + | chr7_1:40571810-40571829 | Msa1019230:CDS | 25.0% |
| ! | ATGATTGTTAGTGTCAATTA+TGG | - | chr7_1:40572028-40572047 | None:intergenic | 25.0% |
| !! | TCGTATTATAGCATATTTTG+AGG | - | chr7_1:40572141-40572160 | None:intergenic | 25.0% |
| !!! | AATTTTTGTTATAGGTTAGG+AGG | + | chr7_1:40572244-40572263 | Msa1019230:intron | 25.0% |
| !!! | ATTTTTGTTATAGGTTAGGA+GGG | + | chr7_1:40572245-40572264 | Msa1019230:intron | 25.0% |
| ! | TTCAAAAATTTATCAACCTC+AGG | + | chr7_1:40572567-40572586 | Msa1019230:intron | 25.0% |
| ! | TCTCAAAAGATGTAAGTTTA+AGG | + | chr7_1:40572784-40572803 | Msa1019230:intron | 25.0% |
| ! | CTCAAAAGATGTAAGTTTAA+GGG | + | chr7_1:40572785-40572804 | Msa1019230:intron | 25.0% |
| ! | GAAATATTATTGTGAATTGC+TGG | - | chr7_1:40572997-40573016 | None:intergenic | 25.0% |
| !! | AGGTCTAAAATACAAAAGTT+AGG | - | chr7_1:40573227-40573246 | None:intergenic | 25.0% |
| !! | ACATTCCGACTTTATATTTT+AGG | + | chr7_1:40573383-40573402 | Msa1019230:intron | 25.0% |
| ! | CTAGACCTAAAATATAAAGT+CGG | - | chr7_1:40573391-40573410 | None:intergenic | 25.0% |
| ! | TAGTTTATAAAATTCGAACG+TGG | + | chr7_1:40573408-40573427 | Msa1019230:intron | 25.0% |
| !!! | ATTTTCCAGTTATTTTGAGA+CGG | - | chr7_1:40573435-40573454 | None:intergenic | 25.0% |
| ! | ATCAAAGCTTAATTTCATAG+GGG | - | chr7_1:40573809-40573828 | None:intergenic | 25.0% |
| ! | GATCAAAGCTTAATTTCATA+GGG | - | chr7_1:40573810-40573829 | None:intergenic | 25.0% |
| ! | TGATCAAAGCTTAATTTCAT+AGG | - | chr7_1:40573811-40573830 | None:intergenic | 25.0% |
| ! | TGGCTTAATGATAATACATA+GGG | - | chr7_1:40573915-40573934 | None:intergenic | 25.0% |
| ! | ATGGCTTAATGATAATACAT+AGG | - | chr7_1:40573916-40573935 | None:intergenic | 25.0% |
| ! | TTAAAATCATGGAAAGTGAA+AGG | - | chr7_1:40574010-40574029 | None:intergenic | 25.0% |
| ! | CTATTCACTGTAAAATCTTT+AGG | + | chr7_1:40574087-40574106 | Msa1019230:three_prime_UTR | 25.0% |
| ! | TGAGATATAGTGCTAATTAA+AGG | + | chr7_1:40574163-40574182 | Msa1019230:three_prime_UTR | 25.0% |
| ! | AATAATTGACAAAGTGAAGA+TGG | - | chr7_1:40574213-40574232 | None:intergenic | 25.0% |
| ATGAAAAGCTAAGGAAAAGT+GGG | - | chr7_1:40570613-40570632 | None:intergenic | 30.0% | |
| AATGAAAAGCTAAGGAAAAG+TGG | - | chr7_1:40570614-40570633 | None:intergenic | 30.0% | |
| !! | AGTTGGTAAATGAAAAGCTA+AGG | - | chr7_1:40570622-40570641 | None:intergenic | 30.0% |
| GATTGATCAAAATGATGTTG+AGG | - | chr7_1:40570909-40570928 | None:intergenic | 30.0% | |
| TTGGTGTGTAAAAACAATCT+TGG | - | chr7_1:40570983-40571002 | None:intergenic | 30.0% | |
| TTTGTCATCAGAGAATTGAT+TGG | + | chr7_1:40571110-40571129 | Msa1019230:CDS | 30.0% | |
| !! | ATTTTGGAGGAGAATTCAAA+GGG | - | chr7_1:40571238-40571257 | None:intergenic | 30.0% |
| !! | AATTTTGGAGGAGAATTCAA+AGG | - | chr7_1:40571239-40571258 | None:intergenic | 30.0% |
| TCAAAGATCTACTCCATTAT+TGG | + | chr7_1:40571394-40571413 | Msa1019230:CDS | 30.0% | |
| TCTACTCCATTATTGGAAAA+TGG | + | chr7_1:40571401-40571420 | Msa1019230:CDS | 30.0% | |
| ! | GAATCAACAATCTCTGAAAA+TGG | + | chr7_1:40571542-40571561 | Msa1019230:CDS | 30.0% |
| ! | CTTTTCCTTGAATTCACATA+AGG | - | chr7_1:40571581-40571600 | None:intergenic | 30.0% |
| !!! | AGTTTCTTTGGTTTTTCCTT+TGG | - | chr7_1:40571615-40571634 | None:intergenic | 30.0% |
| ACTAGAAGTTGAAGTTTCTT+TGG | - | chr7_1:40571627-40571646 | None:intergenic | 30.0% | |
| AAGCGTATGAAAACAAATGA+AGG | + | chr7_1:40571792-40571811 | Msa1019230:CDS | 30.0% | |
| AAATGGTAAAGTAAAAGCAG+AGG | + | chr7_1:40571827-40571846 | Msa1019230:CDS | 30.0% | |
| ! | AGGGGTACAAATAGTAATAA+TGG | + | chr7_1:40571860-40571879 | Msa1019230:CDS | 30.0% |
| GGTACAAATAGTAATAATGG+AGG | + | chr7_1:40571863-40571882 | Msa1019230:CDS | 30.0% | |
| CACATATTGTGGCAATATAA+AGG | - | chr7_1:40572078-40572097 | None:intergenic | 30.0% | |
| ! | ACCACAATTTAAAACCATGA+TGG | + | chr7_1:40572179-40572198 | Msa1019230:intron | 30.0% |
| TAACATGTATATTGCCATCA+TGG | - | chr7_1:40572196-40572215 | None:intergenic | 30.0% | |
| ATGATGGCAATATACATGTT+AGG | + | chr7_1:40572195-40572214 | Msa1019230:intron | 30.0% | |
| AAGTCATGTAATAATTCCTG+AGG | - | chr7_1:40572586-40572605 | None:intergenic | 30.0% | |
| AGGAATCTAATGGGAATATT+GGG | - | chr7_1:40572936-40572955 | None:intergenic | 30.0% | |
| ! | ACAGGTAATCTATTTCTTCT+AGG | + | chr7_1:40573122-40573141 | Msa1019230:intron | 30.0% |
| AACTGTCAAATCAAGATTAG+TGG | + | chr7_1:40573357-40573376 | Msa1019230:intron | 30.0% | |
| ! | AAAAGTGCATGAAACTAGAA+TGG | - | chr7_1:40573522-40573541 | None:intergenic | 30.0% |
| TCATCTTCAGAGAATGTTAA+TGG | - | chr7_1:40573591-40573610 | None:intergenic | 30.0% | |
| ATTCATCTTTGCTTCAATTC+AGG | - | chr7_1:40573846-40573865 | None:intergenic | 30.0% | |
| GAATTGAAGCAAAGATGAAT+AGG | + | chr7_1:40573846-40573865 | Msa1019230:three_prime_UTR | 30.0% | |
| AGATAACATGAAGACAAAAG+AGG | - | chr7_1:40573972-40573991 | None:intergenic | 30.0% | |
| !!! | TAATTTTTTTATCTTGGGGG+TGG | + | chr7_1:40574027-40574046 | Msa1019230:three_prime_UTR | 30.0% |
| !!! | AATTTTTTTATCTTGGGGGT+GGG | + | chr7_1:40574028-40574047 | Msa1019230:three_prime_UTR | 30.0% |
| ATCTTGATTCTGTATTCTGT+TGG | + | chr7_1:40574110-40574129 | Msa1019230:three_prime_UTR | 30.0% | |
| GGTCCAGATTCTTATTATTA+TGG | + | chr7_1:40574131-40574150 | Msa1019230:three_prime_UTR | 30.0% | |
| GTGCCATAATAATAAGAATC+TGG | - | chr7_1:40574137-40574156 | None:intergenic | 30.0% | |
| TTAGCACTATATCTCACAAT+TGG | - | chr7_1:40574159-40574178 | None:intergenic | 30.0% | |
| AAGTGAAGATGGATAATGAT+AGG | - | chr7_1:40574202-40574221 | None:intergenic | 30.0% | |
| TGAAAAGCTAAGGAAAAGTG+GGG | - | chr7_1:40570612-40570631 | None:intergenic | 35.0% | |
| GGAAGATGTAATGTATCAGT+TGG | - | chr7_1:40570639-40570658 | None:intergenic | 35.0% | |
| ! | TAAATTTGGTGGGATATGAG+TGG | - | chr7_1:40570679-40570698 | None:intergenic | 35.0% |
| TGATCAAAATGATGTTGAGG+TGG | - | chr7_1:40570906-40570925 | None:intergenic | 35.0% | |
| !! | GTTGTTGACTTATCCCATAT+TGG | - | chr7_1:40571002-40571021 | None:intergenic | 35.0% |
| TGATTCAGCACTTAGTTCAA+TGG | + | chr7_1:40571043-40571062 | Msa1019230:CDS | 35.0% | |
| TGATGAGATCTCACAAACAT+TGG | + | chr7_1:40571160-40571179 | Msa1019230:CDS | 35.0% | |
| !! | TTTTGGAGGAGAATTCAAAG+GGG | - | chr7_1:40571237-40571256 | None:intergenic | 35.0% |
| ! | GTTGAGATGTTCAATTTTGG+AGG | - | chr7_1:40571251-40571270 | None:intergenic | 35.0% |
| TTCTGCAACAGTTGAATTCA+TGG | - | chr7_1:40571279-40571298 | None:intergenic | 35.0% | |
| !! | AATTCTCTTGCTTTGGAAGT+AGG | + | chr7_1:40571336-40571355 | Msa1019230:CDS | 35.0% |
| TTTGGAAGTAGGAGTTTCAA+TGG | + | chr7_1:40571347-40571366 | Msa1019230:CDS | 35.0% | |
| AGTCCATCATTGAAAGAACT+TGG | + | chr7_1:40571446-40571465 | Msa1019230:CDS | 35.0% | |
| GATCCAAGTTCTTTCAATGA+TGG | - | chr7_1:40571452-40571471 | None:intergenic | 35.0% | |
| GAATTGTTCTACTCAATTGC+AGG | + | chr7_1:40571490-40571509 | Msa1019230:CDS | 35.0% | |
| CTTGAATTCACATAAGGAGA+AGG | - | chr7_1:40571575-40571594 | None:intergenic | 35.0% | |
| CTTCTCCTTATGTGAATTCA+AGG | + | chr7_1:40571573-40571592 | Msa1019230:CDS | 35.0% | |
| AAAGCAGAGGAAGAATCAAA+AGG | + | chr7_1:40571840-40571859 | Msa1019230:CDS | 35.0% | |
| AAGCAGAGGAAGAATCAAAA+GGG | + | chr7_1:40571841-40571860 | Msa1019230:CDS | 35.0% | |
| CTGACATGAATGTAATCCTT+TGG | - | chr7_1:40571932-40571951 | None:intergenic | 35.0% | |
| TTACTCTTTCTGCAAGACTA+TGG | - | chr7_1:40571982-40572001 | None:intergenic | 35.0% | |
| TGTCACATTGTCACATATTG+TGG | - | chr7_1:40572089-40572108 | None:intergenic | 35.0% | |
| TGCGAAAAAAATTGTTGTCG+CGG | + | chr7_1:40572112-40572131 | Msa1019230:intron | 35.0% | |
| !!! | GCCATCATGGTTTTAAATTG+TGG | - | chr7_1:40572183-40572202 | None:intergenic | 35.0% |
| TATTATTCCTTCTAGGTCAC+TGG | + | chr7_1:40572400-40572419 | Msa1019230:intron | 35.0% | |
| GCAGTTCCTATCTATGAAAT+TGG | + | chr7_1:40572719-40572738 | Msa1019230:intron | 35.0% | |
| CTCAATACTAAAATCCACCT+TGG | - | chr7_1:40572757-40572776 | None:intergenic | 35.0% | |
| GAGGAATCTAATGGGAATAT+TGG | - | chr7_1:40572937-40572956 | None:intergenic | 35.0% | |
| ATGCACTTATCTTCACTAAG+TGG | + | chr7_1:40573081-40573100 | Msa1019230:CDS | 35.0% | |
| ! | CTAAGTGGATTTAATGAAGC+TGG | + | chr7_1:40573096-40573115 | Msa1019230:CDS | 35.0% |
| AATCTCTGATCTTGATCAGA+CGG | - | chr7_1:40573199-40573218 | None:intergenic | 35.0% | |
| CTCAACACAATTGTTCAGAT+GGG | + | chr7_1:40573612-40573631 | Msa1019230:CDS | 35.0% | |
| ACAATTGTTCAGATGGGATT+TGG | + | chr7_1:40573618-40573637 | Msa1019230:CDS | 35.0% | |
| !!! | AACTTGTTTTGTCCAAATGC+AGG | + | chr7_1:40573770-40573789 | Msa1019230:intron | 35.0% |
| TTCAATTCAGGCGTAATGAA+TGG | - | chr7_1:40573834-40573853 | None:intergenic | 35.0% | |
| TGAAGATGGATAATGATAGG+TGG | - | chr7_1:40574199-40574218 | None:intergenic | 35.0% | |
| ! | ATTGATGTAGTTGTGATGGG+GGG | - | chr7_1:40570565-40570584 | None:intergenic | 40.0% |
| GATTGATGTAGTTGTGATGG+GGG | - | chr7_1:40570566-40570585 | None:intergenic | 40.0% | |
| GGATTGATGTAGTTGTGATG+GGG | - | chr7_1:40570567-40570586 | None:intergenic | 40.0% | |
| GGGATTGATGTAGTTGTGAT+GGG | - | chr7_1:40570568-40570587 | None:intergenic | 40.0% | |
| AACCATCTTCAATGCCTACA+TGG | + | chr7_1:40570931-40570950 | Msa1019230:CDS | 40.0% | |
| GATGAAAGTGATTGCCATGT+AGG | - | chr7_1:40570948-40570967 | None:intergenic | 40.0% | |
| ! | ATGTTGGAATTTGAAGCTGC+AGG | - | chr7_1:40571077-40571096 | None:intergenic | 40.0% |
| GCTGCAAAATTCTCTTGCTT+TGG | + | chr7_1:40571329-40571348 | Msa1019230:CDS | 40.0% | |
| AACTTCTAGTAACCCTGCAA+TGG | + | chr7_1:40571637-40571656 | Msa1019230:CDS | 40.0% | |
| AGCAGAGGAAGAATCAAAAG+GGG | + | chr7_1:40571842-40571861 | Msa1019230:CDS | 40.0% | |
| ATTCATGTCAGAGCAAGAAG+AGG | + | chr7_1:40571941-40571960 | Msa1019230:CDS | 40.0% | |
| TACCAACCTTATTGCAACCA+GGG | - | chr7_1:40572311-40572330 | None:intergenic | 40.0% | |
| TTACCAACCTTATTGCAACC+AGG | - | chr7_1:40572312-40572331 | None:intergenic | 40.0% | |
| CAGTGGCCAATTTCATAGAT+AGG | - | chr7_1:40572728-40572747 | None:intergenic | 40.0% | |
| !! | AGTTTAAGGGCTCTAGACAA+TGG | + | chr7_1:40572798-40572817 | Msa1019230:intron | 40.0% |
| ! | ATGGTGCTGAGGAATCTAAT+GGG | - | chr7_1:40572945-40572964 | None:intergenic | 40.0% |
| TGTTGTTGCCCATAATAGGA+TGG | - | chr7_1:40572964-40572983 | None:intergenic | 40.0% | |
| GGCATAAACCACCATCTAAT+GGG | - | chr7_1:40573050-40573069 | None:intergenic | 40.0% | |
| TGGCATAAACCACCATCTAA+TGG | - | chr7_1:40573051-40573070 | None:intergenic | 40.0% | |
| ! | ATAAGTGCATGCCAAGGTTT+TGG | - | chr7_1:40573071-40573090 | None:intergenic | 40.0% |
| ! | ATTTAATGAAGCTGGCTCAC+AGG | + | chr7_1:40573104-40573123 | Msa1019230:CDS | 40.0% |
| TCCCTTCATTCACGTAGTTT+CGG | + | chr7_1:40573329-40573348 | Msa1019230:intron | 40.0% | |
| CCATCTGAACAATTGTGTTG+AGG | - | chr7_1:40573614-40573633 | None:intergenic | 40.0% | |
| CCTCAACACAATTGTTCAGA+TGG | + | chr7_1:40573611-40573630 | Msa1019230:CDS | 40.0% | |
| !! | AGTTGATTTGTGCCTGCATT+TGG | - | chr7_1:40573785-40573804 | None:intergenic | 40.0% |
| AGAGAGATCCAGCAAGAACA+AGG | - | chr7_1:40570534-40570553 | None:intergenic | 45.0% | |
| ! | TTGATGTAGTTGTGATGGGG+GGG | - | chr7_1:40570564-40570583 | None:intergenic | 45.0% |
| GGGGATTGATGTAGTTGTGA+TGG | - | chr7_1:40570569-40570588 | None:intergenic | 45.0% | |
| AGAGAGAGAGAGAGAGAGAA+GGG | - | chr7_1:40570589-40570608 | None:intergenic | 45.0% | |
| TGGGATATGAGTGGAAAGGA+GGG | - | chr7_1:40570670-40570689 | None:intergenic | 45.0% | |
| TTGGTGGGATATGAGTGGAA+AGG | - | chr7_1:40570674-40570693 | None:intergenic | 45.0% | |
| !! | TGCCATGTAGGCATTGAAGA+TGG | - | chr7_1:40570936-40570955 | None:intergenic | 45.0% |
| GCAGAATTCTCAACTGATCC+TGG | + | chr7_1:40571293-40571312 | Msa1019230:CDS | 45.0% | |
| GAGCAATTCAAAACCTCCTG+AGG | + | chr7_1:40571904-40571923 | Msa1019230:CDS | 45.0% | |
| !! | ATGTAATCCTTTGGTGCCTC+AGG | - | chr7_1:40571923-40571942 | None:intergenic | 45.0% |
| GGAGGGAGAAAATCAGTGAA+AGG | + | chr7_1:40572262-40572281 | Msa1019230:CDS | 45.0% | |
| CTTCTACAAGATCTTGTCCC+TGG | + | chr7_1:40572291-40572310 | Msa1019230:CDS | 45.0% | |
| TCTTGTCCCTGGTTGCAATA+AGG | + | chr7_1:40572302-40572321 | Msa1019230:CDS | 45.0% | |
| ! | TGCTTTTCCAGTGACCTAGA+AGG | - | chr7_1:40572410-40572429 | None:intergenic | 45.0% |
| ! | ATCATTGCAGCGTCAAGTTG+AGG | + | chr7_1:40572462-40572481 | Msa1019230:CDS | 45.0% |
| ATTGGCCACTGTTAACACCA+AGG | + | chr7_1:40572737-40572756 | Msa1019230:CDS | 45.0% | |
| !! | ATCCACCTTGGTGTTAACAG+TGG | - | chr7_1:40572745-40572764 | None:intergenic | 45.0% |
| ! | GATGGTGCTGAGGAATCTAA+TGG | - | chr7_1:40572946-40572965 | None:intergenic | 45.0% |
| TCCTCAGCACCATCCTATTA+TGG | + | chr7_1:40572952-40572971 | Msa1019230:CDS | 45.0% | |
| CCTCAGCACCATCCTATTAT+GGG | + | chr7_1:40572953-40572972 | Msa1019230:CDS | 45.0% | |
| !! | CTGGTGTTGTTGCCCATAAT+AGG | - | chr7_1:40572968-40572987 | None:intergenic | 45.0% |
| ! | TGTGAATTGCTGGGTTTTGC+TGG | - | chr7_1:40572987-40573006 | None:intergenic | 45.0% |
| ! | TAATGGGTCCACTGAGTTGT+GGG | - | chr7_1:40573034-40573053 | None:intergenic | 45.0% |
| AACTCAGTGGACCCATTAGA+TGG | + | chr7_1:40573036-40573055 | Msa1019230:CDS | 45.0% | |
| GGTGGTTTATGCCAAAACCT+TGG | + | chr7_1:40573057-40573076 | Msa1019230:CDS | 45.0% | |
| GTGAAGATAAGTGCATGCCA+AGG | - | chr7_1:40573077-40573096 | None:intergenic | 45.0% | |
| CCCGAAACTACGTGAATGAA+GGG | - | chr7_1:40573333-40573352 | None:intergenic | 45.0% | |
| CCCTTCATTCACGTAGTTTC+GGG | + | chr7_1:40573330-40573349 | Msa1019230:intron | 45.0% | |
| ACCCGAAACTACGTGAATGA+AGG | - | chr7_1:40573334-40573353 | None:intergenic | 45.0% | |
| GTGGACCGTCTCAAAATAAC+TGG | + | chr7_1:40573427-40573446 | Msa1019230:intron | 45.0% | |
| !!! | TTTTTGTTTATATTATAAAT+TGG | + | chr7_1:40572605-40572624 | Msa1019230:intron | 5.0% |
| GAGAGAGAGAGAGAGAGAAG+GGG | - | chr7_1:40570588-40570607 | None:intergenic | 50.0% | |
| GAGAGAGAGAGAGAGAGAGA+AGG | - | chr7_1:40570590-40570609 | None:intergenic | 50.0% | |
| ! | GTGGAAAGGAGGGTGTGAAA+AGG | - | chr7_1:40570660-40570679 | None:intergenic | 50.0% |
| GTGGGATATGAGTGGAAAGG+AGG | - | chr7_1:40570671-40570690 | None:intergenic | 50.0% | |
| GCAGCTCTTTCTGCAAAACC+AGG | - | chr7_1:40571314-40571333 | None:intergenic | 50.0% | |
| ! | AAAACCTCCTGAGGCACCAA+AGG | + | chr7_1:40571913-40571932 | Msa1019230:CDS | 50.0% |
| !! | TAATCCTTTGGTGCCTCAGG+AGG | - | chr7_1:40571920-40571939 | None:intergenic | 50.0% |
| TACGACCGCAATTGCAGTTG+CGG | + | chr7_1:40572156-40572175 | Msa1019230:intron | 50.0% | |
| GTCCCTGGTTGCAATAAGGT+TGG | + | chr7_1:40572306-40572325 | Msa1019230:intron | 50.0% | |
| ! | CCCATAATAGGATGGTGCTG+AGG | - | chr7_1:40572956-40572975 | None:intergenic | 50.0% |
| AACTGTGACCCACAACTCAG+TGG | + | chr7_1:40573023-40573042 | Msa1019230:CDS | 50.0% | |
| ! | CTAATGGGTCCACTGAGTTG+TGG | - | chr7_1:40573035-40573054 | None:intergenic | 50.0% |
| TCAGTGGACCCATTAGATGG+TGG | + | chr7_1:40573039-40573058 | Msa1019230:CDS | 50.0% | |
| GTGGTCCGCAACTGCAATTG+CGG | - | chr7_1:40572164-40572183 | None:intergenic | 55.0% | |
| GGCCACTGTTAACACCAAGG+TGG | + | chr7_1:40572740-40572759 | Msa1019230:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 40570526 | 40574291 | 40570526 | ID=Msa1019230;Name=Msa1019230 |
| chr7_1 | mRNA | 40570526 | 40574291 | 40570526 | ID=Msa1019230-mRNA-1;Parent=Msa1019230;Name=Msa1019230-mRNA-1;_AED=0.09;_eAED=0.09;_QI=338|0.85|0.87|1|1|1|8|477|515 |
| chr7_1 | exon | 40570526 | 40571658 | 40570526 | ID=Msa1019230-mRNA-1:exon:7884;Parent=Msa1019230-mRNA-1 |
| chr7_1 | exon | 40571765 | 40571962 | 40571765 | ID=Msa1019230-mRNA-1:exon:7885;Parent=Msa1019230-mRNA-1 |
| chr7_1 | exon | 40572258 | 40572323 | 40572258 | ID=Msa1019230-mRNA-1:exon:7886;Parent=Msa1019230-mRNA-1 |
| chr7_1 | exon | 40572415 | 40572483 | 40572415 | ID=Msa1019230-mRNA-1:exon:7887;Parent=Msa1019230-mRNA-1 |
| chr7_1 | exon | 40572723 | 40572794 | 40572723 | ID=Msa1019230-mRNA-1:exon:7888;Parent=Msa1019230-mRNA-1 |
| chr7_1 | exon | 40572904 | 40573125 | 40572904 | ID=Msa1019230-mRNA-1:exon:7889;Parent=Msa1019230-mRNA-1 |
| chr7_1 | exon | 40573585 | 40573687 | 40573585 | ID=Msa1019230-mRNA-1:exon:7890;Parent=Msa1019230-mRNA-1 |
| chr7_1 | exon | 40573792 | 40574291 | 40573792 | ID=Msa1019230-mRNA-1:exon:7891;Parent=Msa1019230-mRNA-1 |
| chr7_1 | five_prime_UTR | 40570526 | 40570863 | 40570526 | ID=Msa1019230-mRNA-1:five_prime_utr;Parent=Msa1019230-mRNA-1 |
| chr7_1 | CDS | 40570864 | 40571658 | 40570864 | ID=Msa1019230-mRNA-1:cds;Parent=Msa1019230-mRNA-1 |
| chr7_1 | CDS | 40571765 | 40571962 | 40571765 | ID=Msa1019230-mRNA-1:cds;Parent=Msa1019230-mRNA-1 |
| chr7_1 | CDS | 40572258 | 40572323 | 40572258 | ID=Msa1019230-mRNA-1:cds;Parent=Msa1019230-mRNA-1 |
| chr7_1 | CDS | 40572415 | 40572483 | 40572415 | ID=Msa1019230-mRNA-1:cds;Parent=Msa1019230-mRNA-1 |
| chr7_1 | CDS | 40572723 | 40572794 | 40572723 | ID=Msa1019230-mRNA-1:cds;Parent=Msa1019230-mRNA-1 |
| chr7_1 | CDS | 40572904 | 40573125 | 40572904 | ID=Msa1019230-mRNA-1:cds;Parent=Msa1019230-mRNA-1 |
| chr7_1 | CDS | 40573585 | 40573687 | 40573585 | ID=Msa1019230-mRNA-1:cds;Parent=Msa1019230-mRNA-1 |
| chr7_1 | CDS | 40573792 | 40573814 | 40573792 | ID=Msa1019230-mRNA-1:cds;Parent=Msa1019230-mRNA-1 |
| chr7_1 | three_prime_UTR | 40573815 | 40574291 | 40573815 | ID=Msa1019230-mRNA-1:three_prime_utr;Parent=Msa1019230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
