Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1019220 | XP_013448523.1 | 94.727 | 531 | 10 | 3 | 1 | 527 | 1 | 517 | 0.0 | 1018 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1019220 | sp|Q9SRT2|BH062_ARATH | 45.403 | 533 | 200 | 16 | 1 | 526 | 1 | 449 | 1.68e-123 | 372 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1019220 | A0A072U9Q4 | 94.727 | 531 | 10 | 3 | 1 | 527 | 1 | 517 | 0.0 | 1018 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1019220 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008970 | Msa1019220 | 0.804410 | 2.188999e-49 | -8.615850e-47 |
| Msa0017710 | Msa1019220 | 0.804641 | 1.959600e-49 | -8.615850e-47 |
| Msa0019570 | Msa1019220 | 0.840106 | 1.061936e-57 | -8.615850e-47 |
| Msa0024650 | Msa1019220 | 0.814577 | 1.435642e-51 | -8.615850e-47 |
| Msa0031650 | Msa1019220 | 0.800870 | 1.176733e-48 | -8.615850e-47 |
| Msa0036550 | Msa1019220 | 0.832741 | 7.951004e-56 | -8.615850e-47 |
| Msa0038010 | Msa1019220 | 0.813810 | 2.120126e-51 | -8.615850e-47 |
| Msa0042210 | Msa1019220 | -0.802521 | 5.393592e-49 | -8.615850e-47 |
| Msa0043990 | Msa1019220 | 0.814646 | 1.385898e-51 | -8.615850e-47 |
| Msa0046050 | Msa1019220 | -0.835079 | 2.067233e-56 | -8.615850e-47 |
| Msa0060410 | Msa1019220 | 0.800492 | 1.404934e-48 | -8.615850e-47 |
| Msa0065400 | Msa1019220 | -0.825733 | 3.991107e-54 | -8.615850e-47 |
| Msa0065520 | Msa1019220 | -0.825459 | 4.633062e-54 | -8.615850e-47 |
| Msa0066350 | Msa1019220 | 0.814718 | 1.335476e-51 | -8.615850e-47 |
| Msa0075830 | Msa1019220 | -0.801662 | 8.100571e-49 | -8.615850e-47 |
| Msa0081120 | Msa1019220 | -0.802987 | 4.321990e-49 | -8.615850e-47 |
| Msa0084390 | Msa1019220 | 0.803521 | 3.351321e-49 | -8.615850e-47 |
| Msa0085030 | Msa1019220 | 0.808963 | 2.391948e-50 | -8.615850e-47 |
| Msa0085710 | Msa1019220 | 0.802638 | 5.102539e-49 | -8.615850e-47 |
| Msa0087580 | Msa1019220 | -0.809973 | 1.451626e-50 | -8.615850e-47 |
| Msa0088830 | Msa1019220 | 0.800125 | 1.668913e-48 | -8.615850e-47 |
| Msa0089510 | Msa1019220 | -0.835629 | 1.501199e-56 | -8.615850e-47 |
| Msa0089520 | Msa1019220 | -0.835531 | 1.589474e-56 | -8.615850e-47 |
| Msa0103600 | Msa1019220 | 0.801372 | 9.287312e-49 | -8.615850e-47 |
| Msa0111730 | Msa1019220 | 0.815690 | 8.124920e-52 | -8.615850e-47 |
| Msa0120450 | Msa1019220 | 0.822912 | 1.837493e-53 | -8.615850e-47 |
| Msa0612660 | Msa1019220 | 0.816542 | 5.240025e-52 | -8.615850e-47 |
| Msa0617120 | Msa1019220 | -0.846615 | 1.942943e-59 | -8.615850e-47 |
| Msa0643230 | Msa1019220 | 0.812096 | 5.033603e-51 | -8.615850e-47 |
| Msa0644220 | Msa1019220 | -0.818333 | 2.070043e-52 | -8.615850e-47 |
| Msa0659230 | Msa1019220 | 0.829017 | 6.513638e-55 | -8.615850e-47 |
| Msa0684170 | Msa1019220 | 0.801654 | 8.129536e-49 | -8.615850e-47 |
| Msa0701530 | Msa1019220 | -0.803426 | 3.505198e-49 | -8.615850e-47 |
| Msa0705810 | Msa1019220 | -0.808271 | 3.360931e-50 | -8.615850e-47 |
| Msa0715510 | Msa1019220 | 0.826570 | 2.522809e-54 | -8.615850e-47 |
| Msa0716600 | Msa1019220 | 0.821074 | 4.898452e-53 | -8.615850e-47 |
| Msa0718770 | Msa1019220 | 0.809963 | 1.458953e-50 | -8.615850e-47 |
| Msa0732970 | Msa1019220 | 0.823802 | 1.138392e-53 | -8.615850e-47 |
| Msa0742090 | Msa1019220 | -0.803082 | 4.130446e-49 | -8.615850e-47 |
| Msa0745010 | Msa1019220 | -0.817525 | 3.151683e-52 | -8.615850e-47 |
| Msa0758150 | Msa1019220 | 0.831086 | 2.037108e-55 | -8.615850e-47 |
| Msa0773960 | Msa1019220 | 0.809282 | 2.044046e-50 | -8.615850e-47 |
| Msa0776340 | Msa1019220 | 0.804687 | 1.916865e-49 | -8.615850e-47 |
| Msa0776590 | Msa1019220 | -0.812244 | 4.674040e-51 | -8.615850e-47 |
| Msa0792410 | Msa1019220 | 0.821890 | 3.173541e-53 | -8.615850e-47 |
| Msa0793100 | Msa1019220 | -0.818711 | 1.699890e-52 | -8.615850e-47 |
| Msa0800120 | Msa1019220 | 0.809538 | 1.801233e-50 | -8.615850e-47 |
| Msa0817100 | Msa1019220 | 0.851725 | 7.362780e-61 | -8.615850e-47 |
| Msa0825960 | Msa1019220 | -0.815338 | 9.731141e-52 | -8.615850e-47 |
| Msa0827800 | Msa1019220 | 0.805373 | 1.377183e-49 | -8.615850e-47 |
| Msa0832270 | Msa1019220 | -0.803280 | 3.758157e-49 | -8.615850e-47 |
| Msa0838210 | Msa1019220 | 0.812375 | 4.376259e-51 | -8.615850e-47 |
| Msa0125600 | Msa1019220 | 0.819364 | 1.207542e-52 | -8.615850e-47 |
| Msa0130710 | Msa1019220 | 0.847116 | 1.417710e-59 | -8.615850e-47 |
| Msa0132250 | Msa1019220 | 0.825266 | 5.148433e-54 | -8.615850e-47 |
| Msa0134300 | Msa1019220 | -0.809611 | 1.736834e-50 | -8.615850e-47 |
| Msa0134380 | Msa1019220 | -0.809259 | 2.067581e-50 | -8.615850e-47 |
| Msa0136090 | Msa1019220 | 0.808086 | 3.681501e-50 | -8.615850e-47 |
| Msa0137010 | Msa1019220 | -0.826566 | 2.528048e-54 | -8.615850e-47 |
| Msa0145200 | Msa1019220 | 0.800114 | 1.677438e-48 | -8.615850e-47 |
| Msa0157030 | Msa1019220 | -0.826687 | 2.365591e-54 | -8.615850e-47 |
| Msa0157740 | Msa1019220 | 0.831286 | 1.819701e-55 | -8.615850e-47 |
| Msa0158280 | Msa1019220 | 0.812200 | 4.778717e-51 | -8.615850e-47 |
| Msa0163690 | Msa1019220 | 0.834030 | 3.794340e-56 | -8.615850e-47 |
| Msa0176600 | Msa1019220 | 0.830387 | 3.022193e-55 | -8.615850e-47 |
| Msa0179830 | Msa1019220 | 0.807317 | 5.362360e-50 | -8.615850e-47 |
| Msa0180600 | Msa1019220 | -0.811289 | 7.542154e-51 | -8.615850e-47 |
| Msa0180780 | Msa1019220 | -0.815445 | 9.210614e-52 | -8.615850e-47 |
| Msa0185540 | Msa1019220 | -0.803798 | 2.934826e-49 | -8.615850e-47 |
| Msa0186510 | Msa1019220 | -0.837108 | 6.313110e-57 | -8.615850e-47 |
| Msa0188560 | Msa1019220 | 0.806624 | 7.513972e-50 | -8.615850e-47 |
| Msa0188670 | Msa1019220 | -0.802207 | 6.258492e-49 | -8.615850e-47 |
| Msa0191180 | Msa1019220 | -0.812644 | 3.821774e-51 | -8.615850e-47 |
| Msa0191990 | Msa1019220 | 0.831427 | 1.679955e-55 | -8.615850e-47 |
| Msa0192680 | Msa1019220 | 0.802358 | 5.825802e-49 | -8.615850e-47 |
| Msa0364550 | Msa1019220 | 0.813039 | 3.131517e-51 | -8.615850e-47 |
| Msa0385770 | Msa1019220 | -0.811736 | 6.029667e-51 | -8.615850e-47 |
| Msa0393880 | Msa1019220 | -0.802706 | 4.940498e-49 | -8.615850e-47 |
| Msa0404070 | Msa1019220 | -0.820672 | 6.060187e-53 | -8.615850e-47 |
| Msa0417290 | Msa1019220 | 0.801010 | 1.101433e-48 | -8.615850e-47 |
| Msa0422250 | Msa1019220 | 0.810687 | 1.018230e-50 | -8.615850e-47 |
| Msa0424220 | Msa1019220 | -0.802458 | 5.556974e-49 | -8.615850e-47 |
| Msa0424240 | Msa1019220 | 0.804754 | 1.855968e-49 | -8.615850e-47 |
| Msa0430040 | Msa1019220 | -0.841363 | 4.974031e-58 | -8.615850e-47 |
| Msa0430970 | Msa1019220 | 0.803614 | 3.204433e-49 | -8.615850e-47 |
| Msa0433670 | Msa1019220 | -0.817419 | 3.330157e-52 | -8.615850e-47 |
| Msa0434090 | Msa1019220 | 0.816469 | 5.441160e-52 | -8.615850e-47 |
| Msa0437790 | Msa1019220 | -0.839693 | 1.359957e-57 | -8.615850e-47 |
| Msa0440720 | Msa1019220 | -0.804901 | 1.729054e-49 | -8.615850e-47 |
| Msa0448310 | Msa1019220 | 0.805869 | 1.083613e-49 | -8.615850e-47 |
| Msa0454160 | Msa1019220 | 0.812857 | 3.432602e-51 | -8.615850e-47 |
| Msa0471020 | Msa1019220 | 0.816569 | 5.167576e-52 | -8.615850e-47 |
| Msa0471070 | Msa1019220 | 0.820979 | 5.151776e-53 | -8.615850e-47 |
| Msa0477550 | Msa1019220 | -0.812672 | 3.768076e-51 | -8.615850e-47 |
| Msa0477900 | Msa1019220 | 0.805549 | 1.265418e-49 | -8.615850e-47 |
| Msa0478400 | Msa1019220 | 0.806879 | 6.639538e-50 | -8.615850e-47 |
| Msa0481050 | Msa1019220 | -0.803994 | 2.671851e-49 | -8.615850e-47 |
| Msa1005370 | Msa1019220 | 0.828454 | 8.912402e-55 | -8.615850e-47 |
| Msa1013560 | Msa1019220 | -0.806197 | 9.244965e-50 | -8.615850e-47 |
| Msa1019220 | Msa1019230 | 0.985062 | 2.065581e-162 | -8.615850e-47 |
| Msa1019220 | Msa1024420 | 0.803006 | 4.283033e-49 | -8.615850e-47 |
| Msa1019220 | Msa1031060 | 0.837428 | 5.228714e-57 | -8.615850e-47 |
| Msa1019220 | Msa1036020 | 0.809202 | 2.125693e-50 | -8.615850e-47 |
| Msa1019220 | Msa1040330 | 0.814553 | 1.453321e-51 | -8.615850e-47 |
| Msa1019220 | Msa1047300 | 0.811672 | 6.227434e-51 | -8.615850e-47 |
| Msa1019220 | Msa1047340 | 0.811596 | 6.468136e-51 | -8.615850e-47 |
| Msa1019220 | Msa1063260 | 0.807985 | 3.867948e-50 | -8.615850e-47 |
| Msa1019220 | Msa1076280 | 0.819316 | 1.238160e-52 | -8.615850e-47 |
| Msa1019220 | Msa1078730 | 0.800139 | 1.657770e-48 | -8.615850e-47 |
| Msa1019220 | Msa1083100 | 0.803675 | 3.113582e-49 | -8.615850e-47 |
| Msa1019220 | Msa1083130 | 0.811843 | 5.714701e-51 | -8.615850e-47 |
| Msa1019220 | Msa1083140 | -0.803487 | 3.405515e-49 | -8.615850e-47 |
| Msa1019220 | Msa1084800 | 0.822077 | 2.872043e-53 | -8.615850e-47 |
| Msa1019220 | Msa1104130 | 0.968734 | 4.228972e-129 | -8.615850e-47 |
| Msa1019220 | Msa1107520 | 0.804075 | 2.570447e-49 | -8.615850e-47 |
| Msa1019220 | Msa1119670 | 0.832153 | 1.112223e-55 | -8.615850e-47 |
| Msa1019220 | Msa1126530 | 0.811104 | 8.271551e-51 | -8.615850e-47 |
| Msa1019220 | Msa1127900 | -0.807432 | 5.070546e-50 | -8.615850e-47 |
| Msa1019220 | Msa1127940 | 0.805364 | 1.383735e-49 | -8.615850e-47 |
| Msa1019220 | Msa1131300 | -0.814058 | 1.869518e-51 | -8.615850e-47 |
| Msa1019220 | Msa1133440 | -0.816613 | 5.052803e-52 | -8.615850e-47 |
| Msa1019220 | Msa1143080 | 0.811573 | 6.544848e-51 | -8.615850e-47 |
| Msa1019220 | Msa1160540 | 0.821169 | 4.658337e-53 | -8.615850e-47 |
| Msa1019220 | Msa1165810 | -0.803693 | 3.085600e-49 | -8.615850e-47 |
| Msa1019220 | Msa1165860 | 0.816262 | 6.056026e-52 | -8.615850e-47 |
| Msa1019220 | Msa1211160 | 0.830254 | 3.257169e-55 | -8.615850e-47 |
| Msa1019220 | Msa1211320 | 0.801683 | 8.020001e-49 | -8.615850e-47 |
| Msa1019220 | Msa1215540 | -0.832763 | 7.851452e-56 | -8.615850e-47 |
| Msa1019220 | Msa1219780 | 0.818283 | 2.125133e-52 | -8.615850e-47 |
| Msa1019220 | Msa1220680 | -0.801864 | 7.363798e-49 | -8.615850e-47 |
| Msa1019220 | Msa1223540 | 0.805046 | 1.612768e-49 | -8.615850e-47 |
| Msa1019220 | Msa1223620 | 0.826698 | 2.351661e-54 | -8.615850e-47 |
| Msa1019220 | Msa1223960 | 0.829846 | 4.094890e-55 | -8.615850e-47 |
| Msa1019220 | Msa1223990 | 0.820823 | 5.595954e-53 | -8.615850e-47 |
| Msa1019220 | Msa1228350 | -0.807888 | 4.055138e-50 | -8.615850e-47 |
| Msa1019220 | Msa1228460 | -0.803769 | 2.976486e-49 | -8.615850e-47 |
| Msa1019220 | Msa1255710 | 0.807259 | 5.515907e-50 | -8.615850e-47 |
| Msa1019220 | Msa1258020 | 0.809433 | 1.897007e-50 | -8.615850e-47 |
| Msa1019220 | Msa1259570 | 0.803343 | 3.647776e-49 | -8.615850e-47 |
| Msa1019220 | Msa1263110 | 0.802904 | 4.496607e-49 | -8.615850e-47 |
| Msa1019220 | Msa1263120 | 0.804673 | 1.929247e-49 | -8.615850e-47 |
| Msa1019220 | Msa1263520 | 0.823571 | 1.289414e-53 | -8.615850e-47 |
| Msa1019220 | Msa1263590 | -0.829472 | 5.050857e-55 | -8.615850e-47 |
| Msa1019220 | Msa1263670 | -0.823124 | 1.639792e-53 | -8.615850e-47 |
| Msa1019220 | Msa1266710 | 0.814762 | 1.306372e-51 | -8.615850e-47 |
| Msa1019220 | Msa1268360 | 0.812453 | 4.207992e-51 | -8.615850e-47 |
| Msa1019220 | Msa1269730 | -0.822801 | 1.950675e-53 | -8.615850e-47 |
| Msa1019220 | Msa1273320 | 0.831453 | 1.654859e-55 | -8.615850e-47 |
| Msa1019220 | Msa1280360 | 0.810400 | 1.174578e-50 | -8.615850e-47 |
| Msa1019220 | Msa1299310 | 0.808802 | 2.589509e-50 | -8.615850e-47 |
| Msa1019220 | Msa1329770 | 0.800847 | 1.189458e-48 | -8.615850e-47 |
| Msa1019220 | Msa1335210 | -0.802363 | 5.812250e-49 | -8.615850e-47 |
| Msa1019220 | Msa1335500 | 0.807962 | 3.912149e-50 | -8.615850e-47 |
| Msa1019220 | Msa1348330 | 0.833559 | 4.974872e-56 | -8.615850e-47 |
| Msa1019220 | Msa1349850 | -0.804782 | 1.830793e-49 | -8.615850e-47 |
| Msa1019220 | Msa1363690 | 0.861068 | 1.329923e-63 | -8.615850e-47 |
| Msa1019220 | Msa1369180 | -0.805060 | 1.601764e-49 | -8.615850e-47 |
| Msa1019220 | Msa1373390 | -0.839473 | 1.551777e-57 | -8.615850e-47 |
| Msa1019220 | Msa1375780 | -0.800625 | 1.319839e-48 | -8.615850e-47 |
| Msa1019220 | Msa1377230 | 0.808654 | 2.785574e-50 | -8.615850e-47 |
| Msa1019220 | Msa1378950 | 0.850774 | 1.366238e-60 | -8.615850e-47 |
| Msa1019220 | Msa1387480 | 0.819897 | 9.121726e-53 | -8.615850e-47 |
| Msa1019220 | Msa1395720 | 0.832297 | 1.024272e-55 | -8.615850e-47 |
| Msa1019220 | Msa1396330 | 0.801690 | 7.995234e-49 | -8.615850e-47 |
| Msa1019220 | Msa1396550 | 0.864802 | 9.352297e-65 | -8.615850e-47 |
| Msa1019220 | Msa1401650 | 0.815944 | 7.129950e-52 | -8.615850e-47 |
| Msa1019220 | Msa1404810 | -0.808687 | 2.739907e-50 | -8.615850e-47 |
| Msa1019220 | Msa1407210 | 0.809168 | 2.161663e-50 | -8.615850e-47 |
| Msa1019220 | Msa1417220 | 0.814407 | 1.565136e-51 | -8.615850e-47 |
| Msa1019220 | Msa1441450 | 0.824798 | 6.638628e-54 | -8.615850e-47 |
| Msa1019220 | Msa1445780 | 0.888580 | 5.206729e-73 | -8.615850e-47 |
| Msa1019220 | Msa1451690 | -0.820791 | 5.692126e-53 | -8.615850e-47 |
| Msa1019220 | Msa1453540 | -0.810774 | 9.751086e-51 | -8.615850e-47 |
| Msa1019220 | Msa1456830 | -0.802706 | 4.939593e-49 | -8.615850e-47 |
| Msa1019220 | Msa1458270 | 0.802924 | 4.453283e-49 | -8.615850e-47 |
| Msa1019220 | Msa1462610 | 0.822207 | 2.680094e-53 | -8.615850e-47 |
| Msa1019220 | Msa1466130 | 0.811192 | 7.917461e-51 | -8.615850e-47 |
| Msa0245660 | Msa1019220 | 0.815808 | 7.644811e-52 | -8.615850e-47 |
| Msa0253160 | Msa1019220 | -0.828704 | 7.754515e-55 | -8.615850e-47 |
| Msa0264230 | Msa1019220 | 0.808969 | 2.384397e-50 | -8.615850e-47 |
| Msa0269240 | Msa1019220 | 0.839546 | 1.485322e-57 | -8.615850e-47 |
| Msa0291940 | Msa1019220 | -0.832127 | 1.128619e-55 | -8.615850e-47 |
| Msa0301460 | Msa1019220 | -0.801904 | 7.223641e-49 | -8.615850e-47 |
| Msa0307630 | Msa1019220 | 0.818731 | 1.681906e-52 | -8.615850e-47 |
| Msa0311910 | Msa1019220 | -0.824014 | 1.015517e-53 | -8.615850e-47 |
| Msa0322460 | Msa1019220 | 0.802093 | 6.605558e-49 | -8.615850e-47 |
| Msa0329910 | Msa1019220 | -0.826133 | 3.206016e-54 | -8.615850e-47 |
| Msa0336640 | Msa1019220 | 0.809881 | 1.519726e-50 | -8.615850e-47 |
| Msa0343260 | Msa1019220 | 0.810445 | 1.148401e-50 | -8.615850e-47 |
| Msa0354600 | Msa1019220 | 0.800716 | 1.264884e-48 | -8.615850e-47 |
| Msa0361700 | Msa1019220 | 0.805146 | 1.536424e-49 | -8.615850e-47 |
| Msa0485210 | Msa1019220 | -0.808468 | 3.051742e-50 | -8.615850e-47 |
| Msa0487110 | Msa1019220 | 0.813063 | 3.093183e-51 | -8.615850e-47 |
| Msa0500490 | Msa1019220 | -0.815944 | 7.129950e-52 | -8.615850e-47 |
| Msa0502940 | Msa1019220 | 0.808689 | 2.737262e-50 | -8.615850e-47 |
| Msa0504360 | Msa1019220 | -0.800612 | 1.327983e-48 | -8.615850e-47 |
| Msa0514650 | Msa1019220 | 0.814197 | 1.741296e-51 | -8.615850e-47 |
| Msa0515820 | Msa1019220 | 0.815085 | 1.107594e-51 | -8.615850e-47 |
| Msa0519360 | Msa1019220 | 0.800940 | 1.138291e-48 | -8.615850e-47 |
| Msa0521940 | Msa1019220 | 0.821424 | 4.067447e-53 | -8.615850e-47 |
| Msa0538440 | Msa1019220 | 0.802407 | 5.693956e-49 | -8.615850e-47 |
| Msa0568920 | Msa1019220 | 0.825751 | 3.950620e-54 | -8.615850e-47 |
| Msa0575380 | Msa1019220 | 0.830837 | 2.344720e-55 | -8.615850e-47 |
| Msa0576180 | Msa1019220 | 0.800836 | 1.195505e-48 | -8.615850e-47 |
| Msa0580540 | Msa1019220 | -0.804894 | 1.734805e-49 | -8.615850e-47 |
| Msa0581570 | Msa1019220 | 0.824614 | 7.335844e-54 | -8.615850e-47 |
| Msa0602100 | Msa1019220 | 0.810074 | 1.381086e-50 | -8.615850e-47 |
| Msa0851760 | Msa1019220 | 0.805359 | 1.386511e-49 | -8.615850e-47 |
| Msa0910590 | Msa1019220 | 0.813170 | 2.931498e-51 | -8.615850e-47 |
| Msa0913500 | Msa1019220 | 0.805885 | 1.075630e-49 | -8.615850e-47 |
| Msa0930210 | Msa1019220 | 0.811822 | 5.776366e-51 | -8.615850e-47 |
| Msa0930950 | Msa1019220 | -0.804347 | 2.256092e-49 | -8.615850e-47 |
| Msa0931750 | Msa1019220 | 0.811660 | 6.266214e-51 | -8.615850e-47 |
| Msa0951060 | Msa1019220 | 0.816040 | 6.789123e-52 | -8.615850e-47 |
| Msa0963290 | Msa1019220 | 0.820452 | 6.808090e-53 | -8.615850e-47 |
| Msa0966410 | Msa1019220 | -0.806189 | 9.281647e-50 | -8.615850e-47 |
| Msa0975550 | Msa1019220 | -0.827752 | 1.314903e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1019220 | MtrunA17_Chr7g0234761 | 94.727 | 531 | 10 | 3 | 1 | 527 | 1 | 517 | 0.0 | 1018 |
| Msa1019220 | MtrunA17_Chr8g0339091 | 61.020 | 549 | 130 | 17 | 1 | 524 | 1 | 490 | 0.0 | 555 |
| Msa1019220 | MtrunA17_Chr1g0152131 | 36.788 | 386 | 171 | 11 | 105 | 454 | 74 | 422 | 8.86e-54 | 187 |
| Msa1019220 | MtrunA17_Chr8g0365941 | 38.310 | 355 | 163 | 13 | 142 | 466 | 125 | 453 | 1.40e-51 | 182 |
| Msa1019220 | MtrunA17_Chr4g0035101 | 57.647 | 170 | 57 | 4 | 272 | 434 | 85 | 246 | 1.48e-50 | 176 |
| Msa1019220 | MtrunA17_Chr3g0144641 | 64.748 | 139 | 45 | 2 | 280 | 414 | 140 | 278 | 8.64e-50 | 176 |
| Msa1019220 | MtrunA17_Chr8g0363921 | 51.232 | 203 | 83 | 4 | 243 | 438 | 76 | 269 | 8.19e-49 | 170 |
| Msa1019220 | MtrunA17_Chr5g0415291 | 56.667 | 150 | 48 | 2 | 266 | 415 | 68 | 200 | 3.85e-43 | 153 |
| Msa1019220 | MtrunA17_Chr8g0385911 | 69.643 | 112 | 31 | 2 | 319 | 427 | 137 | 248 | 4.67e-43 | 155 |
| Msa1019220 | MtrunA17_Chr7g0258161 | 58.333 | 132 | 44 | 3 | 324 | 446 | 170 | 299 | 2.22e-41 | 151 |
| Msa1019220 | MtrunA17_Chr3g0131771 | 88.750 | 80 | 9 | 0 | 319 | 398 | 139 | 218 | 7.09e-41 | 150 |
| Msa1019220 | MtrunA17_Chr1g0174161 | 61.111 | 108 | 37 | 2 | 324 | 426 | 157 | 264 | 2.21e-38 | 143 |
| Msa1019220 | MtrunA17_Chr6g0484271 | 60.909 | 110 | 43 | 0 | 298 | 407 | 126 | 235 | 6.79e-37 | 137 |
| Msa1019220 | MtrunA17_Chr4g0074161 | 54.054 | 111 | 42 | 4 | 327 | 431 | 206 | 313 | 2.11e-22 | 99.8 |
| Msa1019220 | MtrunA17_Chr1g0190731 | 64.000 | 75 | 26 | 1 | 318 | 392 | 184 | 257 | 5.83e-22 | 97.4 |
| Msa1019220 | MtrunA17_Chr4g0032951 | 58.462 | 65 | 27 | 0 | 327 | 391 | 355 | 419 | 2.42e-15 | 78.2 |
| Msa1019220 | MtrunA17_Chr1g0184841 | 60.000 | 75 | 29 | 1 | 318 | 392 | 111 | 184 | 2.85e-15 | 76.3 |
| Msa1019220 | MtrunA17_Chr4g0014771 | 55.385 | 65 | 29 | 0 | 327 | 391 | 118 | 182 | 3.83e-15 | 73.9 |
| Msa1019220 | MtrunA17_Chr2g0329041 | 53.846 | 65 | 30 | 0 | 325 | 389 | 330 | 394 | 6.16e-15 | 77.0 |
| Msa1019220 | MtrunA17_Chr1g0182791 | 52.174 | 69 | 32 | 1 | 329 | 397 | 319 | 386 | 7.37e-15 | 77.4 |
| Msa1019220 | MtrunA17_Chr7g0258181 | 50.725 | 69 | 34 | 0 | 327 | 395 | 243 | 311 | 1.97e-14 | 74.3 |
| Msa1019220 | MtrunA17_Chr1g0174271 | 52.174 | 69 | 33 | 0 | 327 | 395 | 298 | 366 | 2.00e-14 | 75.1 |
| Msa1019220 | MtrunA17_Chr1g0193321 | 51.562 | 64 | 30 | 1 | 329 | 392 | 464 | 526 | 3.22e-14 | 75.5 |
| Msa1019220 | MtrunA17_Chr3g0087771 | 50.769 | 65 | 32 | 0 | 327 | 391 | 322 | 386 | 5.02e-13 | 70.9 |
| Msa1019220 | MtrunA17_Chr1g0153241 | 39.560 | 91 | 47 | 2 | 303 | 393 | 68 | 150 | 1.23e-12 | 68.2 |
| Msa1019220 | MtrunA17_Chr8g0351881 | 47.692 | 65 | 34 | 0 | 327 | 391 | 316 | 380 | 1.75e-12 | 69.3 |
| Msa1019220 | MtrunA17_Chr1g0152651 | 41.000 | 100 | 39 | 2 | 292 | 391 | 258 | 337 | 2.31e-12 | 68.6 |
| Msa1019220 | MtrunA17_Chr5g0393721 | 51.562 | 64 | 30 | 1 | 328 | 391 | 225 | 287 | 7.56e-12 | 66.6 |
| Msa1019220 | MtrunA17_Chr7g0262691 | 36.190 | 105 | 65 | 2 | 288 | 392 | 214 | 316 | 9.82e-12 | 67.4 |
| Msa1019220 | MtrunA17_Chr3g0134741 | 53.125 | 64 | 29 | 1 | 328 | 391 | 230 | 292 | 1.55e-11 | 65.9 |
| Msa1019220 | MtrunA17_Chr3g0095391 | 50.000 | 64 | 31 | 1 | 329 | 392 | 311 | 373 | 1.58e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1019220 | AT3G07340.1 | 45.403 | 533 | 200 | 16 | 1 | 526 | 1 | 449 | 1.70e-124 | 372 |
| Msa1019220 | AT3G07340.2 | 45.030 | 493 | 186 | 13 | 1 | 486 | 1 | 415 | 2.58e-113 | 343 |
| Msa1019220 | AT5G48560.1 | 46.950 | 541 | 202 | 22 | 1 | 509 | 1 | 488 | 9.64e-109 | 333 |
| Msa1019220 | AT5G48560.2 | 46.911 | 518 | 191 | 21 | 1 | 486 | 1 | 466 | 1.14e-101 | 314 |
| Msa1019220 | AT3G23690.1 | 47.547 | 265 | 107 | 6 | 242 | 505 | 113 | 346 | 1.69e-60 | 204 |
| Msa1019220 | AT1G68920.3 | 43.284 | 335 | 142 | 13 | 122 | 426 | 97 | 413 | 1.20e-57 | 199 |
| Msa1019220 | AT1G68920.1 | 41.493 | 335 | 149 | 10 | 122 | 426 | 97 | 414 | 1.68e-57 | 199 |
| Msa1019220 | AT1G68920.4 | 41.493 | 335 | 149 | 10 | 122 | 426 | 97 | 414 | 1.68e-57 | 199 |
| Msa1019220 | AT1G68920.2 | 41.493 | 335 | 149 | 10 | 122 | 426 | 97 | 414 | 1.68e-57 | 199 |
| Msa1019220 | AT1G26260.4 | 43.345 | 293 | 121 | 10 | 137 | 426 | 68 | 318 | 1.52e-52 | 183 |
| Msa1019220 | AT1G26260.1 | 43.345 | 293 | 121 | 10 | 137 | 426 | 68 | 318 | 1.52e-52 | 183 |
| Msa1019220 | AT1G26260.6 | 43.345 | 293 | 121 | 10 | 137 | 426 | 68 | 318 | 1.52e-52 | 183 |
| Msa1019220 | AT1G26260.2 | 43.345 | 293 | 121 | 10 | 137 | 426 | 68 | 318 | 1.52e-52 | 183 |
| Msa1019220 | AT1G26260.5 | 44.086 | 279 | 111 | 10 | 151 | 426 | 60 | 296 | 1.28e-49 | 175 |
| Msa1019220 | AT1G59640.1 | 53.073 | 179 | 60 | 3 | 268 | 446 | 79 | 233 | 7.26e-49 | 170 |
| Msa1019220 | AT1G10120.2 | 68.908 | 119 | 36 | 1 | 301 | 418 | 179 | 297 | 9.68e-49 | 172 |
| Msa1019220 | AT1G10120.1 | 68.908 | 119 | 36 | 1 | 301 | 418 | 179 | 297 | 9.68e-49 | 172 |
| Msa1019220 | AT1G26260.3 | 59.615 | 156 | 51 | 4 | 272 | 426 | 123 | 267 | 2.74e-48 | 171 |
| Msa1019220 | AT1G59640.2 | 59.589 | 146 | 57 | 1 | 268 | 413 | 79 | 222 | 1.07e-46 | 166 |
| Msa1019220 | AT2G18300.1 | 53.939 | 165 | 63 | 3 | 277 | 428 | 129 | 293 | 5.61e-46 | 164 |
| Msa1019220 | AT4G34530.1 | 55.488 | 164 | 51 | 4 | 268 | 413 | 99 | 258 | 8.04e-46 | 164 |
| Msa1019220 | AT2G18300.2 | 54.762 | 168 | 59 | 5 | 277 | 428 | 129 | 295 | 1.20e-45 | 163 |
| Msa1019220 | AT2G18300.3 | 54.762 | 168 | 59 | 5 | 277 | 428 | 129 | 295 | 2.10e-45 | 163 |
| Msa1019220 | AT5G50915.3 | 50.000 | 210 | 80 | 9 | 242 | 437 | 62 | 260 | 5.46e-44 | 157 |
| Msa1019220 | AT5G50915.4 | 50.000 | 210 | 80 | 9 | 242 | 437 | 62 | 260 | 5.46e-44 | 157 |
| Msa1019220 | AT5G50915.1 | 49.065 | 214 | 84 | 9 | 242 | 441 | 62 | 264 | 8.64e-44 | 157 |
| Msa1019220 | AT5G50915.2 | 49.065 | 214 | 84 | 9 | 242 | 441 | 62 | 264 | 8.64e-44 | 157 |
| Msa1019220 | AT4G36540.2 | 58.571 | 140 | 54 | 2 | 275 | 414 | 93 | 228 | 4.04e-43 | 155 |
| Msa1019220 | AT4G36540.1 | 59.155 | 142 | 53 | 3 | 275 | 416 | 93 | 229 | 7.72e-43 | 155 |
| Msa1019220 | AT5G62610.2 | 76.087 | 92 | 17 | 1 | 308 | 399 | 139 | 225 | 5.99e-42 | 152 |
| Msa1019220 | AT5G62610.1 | 76.087 | 92 | 17 | 1 | 308 | 399 | 139 | 225 | 5.99e-42 | 152 |
| Msa1019220 | AT2G42300.4 | 68.889 | 90 | 28 | 0 | 324 | 413 | 182 | 271 | 1.12e-39 | 145 |
| Msa1019220 | AT3G57800.2 | 56.489 | 131 | 42 | 3 | 324 | 443 | 201 | 327 | 1.48e-39 | 148 |
| Msa1019220 | AT2G42300.1 | 60.833 | 120 | 37 | 3 | 324 | 443 | 182 | 291 | 3.76e-39 | 145 |
| Msa1019220 | AT1G25330.1 | 59.292 | 113 | 37 | 1 | 306 | 418 | 92 | 195 | 1.58e-36 | 135 |
| Msa1019220 | AT1G18400.2 | 72.289 | 83 | 23 | 0 | 325 | 407 | 143 | 225 | 2.03e-34 | 130 |
| Msa1019220 | AT1G73830.2 | 58.182 | 110 | 46 | 0 | 298 | 407 | 118 | 227 | 3.17e-34 | 130 |
| Msa1019220 | AT1G73830.1 | 58.182 | 110 | 46 | 0 | 298 | 407 | 118 | 227 | 3.41e-34 | 130 |
| Msa1019220 | AT1G18400.1 | 72.289 | 83 | 23 | 0 | 325 | 407 | 143 | 225 | 3.61e-34 | 130 |
| Msa1019220 | AT3G57800.1 | 41.573 | 178 | 42 | 4 | 324 | 443 | 201 | 374 | 5.37e-31 | 125 |
| Msa1019220 | AT2G24260.2 | 66.667 | 72 | 23 | 1 | 321 | 392 | 29 | 99 | 1.14e-23 | 100 |
| Msa1019220 | AT2G24260.1 | 66.667 | 72 | 23 | 1 | 321 | 392 | 132 | 202 | 1.19e-22 | 99.8 |
| Msa1019220 | AT4G30980.1 | 52.941 | 102 | 37 | 3 | 291 | 392 | 104 | 194 | 1.19e-22 | 99.0 |
| Msa1019220 | AT5G58010.1 | 54.545 | 99 | 44 | 1 | 294 | 392 | 66 | 163 | 1.49e-22 | 98.6 |
| Msa1019220 | AT4G30980.2 | 52.941 | 102 | 37 | 3 | 291 | 392 | 152 | 242 | 2.42e-22 | 99.0 |
| Msa1019220 | AT2G42300.5 | 83.721 | 43 | 7 | 0 | 324 | 366 | 182 | 224 | 1.59e-18 | 85.1 |
| Msa1019220 | AT2G42300.3 | 83.721 | 43 | 7 | 0 | 324 | 366 | 182 | 224 | 1.59e-18 | 85.1 |
| Msa1019220 | AT2G42300.2 | 83.721 | 43 | 7 | 0 | 324 | 366 | 182 | 224 | 1.79e-18 | 85.1 |
| Msa1019220 | AT4G28790.1 | 34.932 | 146 | 76 | 4 | 248 | 392 | 208 | 335 | 6.39e-15 | 77.4 |
| Msa1019220 | AT2G20180.7 | 53.968 | 63 | 28 | 1 | 330 | 392 | 210 | 271 | 1.87e-14 | 75.9 |
| Msa1019220 | AT2G20180.1 | 53.968 | 63 | 28 | 1 | 330 | 392 | 210 | 271 | 1.87e-14 | 75.9 |
| Msa1019220 | AT2G20180.5 | 53.968 | 63 | 28 | 1 | 330 | 392 | 210 | 271 | 1.87e-14 | 75.9 |
| Msa1019220 | AT4G09180.1 | 52.239 | 67 | 32 | 0 | 325 | 391 | 182 | 248 | 1.99e-14 | 73.9 |
| Msa1019220 | AT2G20180.4 | 53.968 | 63 | 28 | 1 | 330 | 392 | 281 | 342 | 2.52e-14 | 75.9 |
| Msa1019220 | AT2G20180.6 | 53.968 | 63 | 28 | 1 | 330 | 392 | 281 | 342 | 2.52e-14 | 75.9 |
| Msa1019220 | AT2G20180.2 | 53.968 | 63 | 28 | 1 | 330 | 392 | 281 | 342 | 2.52e-14 | 75.9 |
| Msa1019220 | AT2G20180.3 | 53.968 | 63 | 28 | 1 | 330 | 392 | 281 | 342 | 2.52e-14 | 75.9 |
| Msa1019220 | AT4G02590.3 | 57.500 | 80 | 29 | 2 | 317 | 392 | 69 | 147 | 3.24e-14 | 73.2 |
| Msa1019220 | AT2G42280.1 | 53.125 | 64 | 30 | 0 | 327 | 390 | 279 | 342 | 3.66e-14 | 74.3 |
| Msa1019220 | AT4G02590.2 | 57.500 | 80 | 29 | 2 | 317 | 392 | 132 | 210 | 4.64e-14 | 73.6 |
| Msa1019220 | AT4G02590.1 | 57.500 | 80 | 29 | 2 | 317 | 392 | 132 | 210 | 4.64e-14 | 73.6 |
| Msa1019220 | AT1G51140.1 | 56.250 | 64 | 28 | 0 | 327 | 390 | 304 | 367 | 4.96e-14 | 74.3 |
| Msa1019220 | AT1G09530.3 | 51.562 | 64 | 30 | 1 | 329 | 392 | 339 | 401 | 6.61e-14 | 74.7 |
| Msa1019220 | AT1G09530.2 | 51.562 | 64 | 30 | 1 | 329 | 392 | 339 | 401 | 6.61e-14 | 74.7 |
| Msa1019220 | AT1G09530.5 | 51.562 | 64 | 30 | 1 | 329 | 392 | 339 | 401 | 6.61e-14 | 74.7 |
| Msa1019220 | AT1G09530.1 | 51.562 | 64 | 30 | 1 | 329 | 392 | 339 | 401 | 6.61e-14 | 74.7 |
| Msa1019220 | AT1G09530.4 | 51.562 | 64 | 30 | 1 | 329 | 392 | 339 | 401 | 6.61e-14 | 74.7 |
| Msa1019220 | AT1G09530.6 | 51.562 | 64 | 30 | 1 | 329 | 392 | 339 | 401 | 6.61e-14 | 74.7 |
| Msa1019220 | AT2G42280.3 | 54.545 | 66 | 28 | 1 | 327 | 390 | 279 | 344 | 6.97e-14 | 73.6 |
| Msa1019220 | AT4G28790.2 | 33.793 | 145 | 77 | 4 | 251 | 394 | 211 | 337 | 1.03e-13 | 72.8 |
| Msa1019220 | AT1G35460.1 | 51.515 | 66 | 32 | 0 | 326 | 391 | 180 | 245 | 1.15e-13 | 71.6 |
| Msa1019220 | AT4G28815.2 | 56.897 | 58 | 24 | 1 | 330 | 387 | 71 | 127 | 1.48e-13 | 70.9 |
| Msa1019220 | AT1G03040.2 | 63.636 | 66 | 23 | 1 | 327 | 392 | 139 | 203 | 1.61e-13 | 71.6 |
| Msa1019220 | AT1G03040.1 | 63.636 | 66 | 23 | 1 | 327 | 392 | 144 | 208 | 1.81e-13 | 71.6 |
| Msa1019220 | AT4G28800.1 | 35.938 | 128 | 65 | 3 | 264 | 391 | 202 | 312 | 2.55e-13 | 72.4 |
| Msa1019220 | AT1G03040.3 | 63.636 | 66 | 23 | 1 | 327 | 392 | 144 | 208 | 3.60e-13 | 71.2 |
| Msa1019220 | AT4G28815.1 | 56.897 | 58 | 24 | 1 | 330 | 387 | 147 | 203 | 5.54e-13 | 70.5 |
| Msa1019220 | AT2G20180.8 | 53.333 | 60 | 27 | 1 | 330 | 389 | 281 | 339 | 5.83e-13 | 70.5 |
| Msa1019220 | AT4G28800.2 | 35.433 | 127 | 65 | 3 | 264 | 390 | 214 | 323 | 8.29e-13 | 70.9 |
| Msa1019220 | AT4G33880.1 | 43.182 | 88 | 49 | 1 | 304 | 391 | 243 | 329 | 1.01e-12 | 70.1 |
| Msa1019220 | AT2G14760.1 | 42.857 | 91 | 51 | 1 | 301 | 391 | 211 | 300 | 1.78e-12 | 68.9 |
| Msa1019220 | AT2G46970.1 | 34.211 | 114 | 57 | 3 | 284 | 392 | 187 | 287 | 3.51e-12 | 68.9 |
| Msa1019220 | AT2G46970.2 | 34.211 | 114 | 57 | 3 | 284 | 392 | 156 | 256 | 3.95e-12 | 68.6 |
| Msa1019220 | AT2G46970.3 | 34.211 | 114 | 57 | 3 | 284 | 392 | 165 | 265 | 4.09e-12 | 68.6 |
| Msa1019220 | AT1G27740.1 | 43.617 | 94 | 44 | 2 | 298 | 391 | 146 | 230 | 1.18e-11 | 65.5 |
| Msa1019220 | AT2G43140.1 | 48.611 | 72 | 35 | 1 | 321 | 390 | 126 | 197 | 1.39e-11 | 64.7 |
| Msa1019220 | AT4G00050.2 | 50.769 | 65 | 31 | 1 | 327 | 391 | 105 | 168 | 3.48e-11 | 64.7 |
| Msa1019220 | AT4G00050.1 | 50.769 | 65 | 31 | 1 | 327 | 391 | 207 | 270 | 6.62e-11 | 64.7 |
| Msa1019220 | AT4G00050.3 | 50.769 | 65 | 31 | 1 | 327 | 391 | 207 | 270 | 7.97e-11 | 64.3 |
| Msa1019220 | AT4G36930.1 | 50.820 | 61 | 29 | 1 | 333 | 393 | 197 | 256 | 9.06e-11 | 64.3 |
Find 133 sgRNAs with CRISPR-Local
Find 226 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTCCAGATTCTTATTATTA+TGG | 0.191721 | 7_1:+40517388 | Msa1019220:three_prime_UTR |
| AGAGAATTGATTGGTAAATT+AGG | 0.220575 | 7_1:+40514375 | Msa1019220:CDS |
| TTCCATTAAGGAAAAGATTA+AGG | 0.223192 | 7_1:-40514103 | None:intergenic |
| GCAGTTCCTATCTATGAAAT+TGG | 0.223353 | 7_1:+40515975 | Msa1019220:intron |
| TCCTCAGCACCATCCTATTA+TGG | 0.234641 | 7_1:+40516208 | Msa1019220:CDS |
| TCTACTCCATTGTTGGAAAA+TGG | 0.244193 | 7_1:+40514657 | Msa1019220:CDS |
| CTATTCACTGTAAAATCTTT+AGG | 0.253555 | 7_1:+40517344 | Msa1019220:three_prime_UTR |
| ACATCAACAAGAAATTTAAT+TGG | 0.262134 | 7_1:+40517141 | Msa1019220:three_prime_UTR |
| GTTTCAATCAAATAATTCTT+TGG | 0.281320 | 7_1:+40516162 | Msa1019220:CDS |
| GGACTCAACCTTGTTCTTGC+TGG | 0.285071 | 7_1:+40513765 | None:intergenic |
| GAGGAATCTAATGGGAATAT+TGG | 0.295383 | 7_1:-40516190 | None:intergenic |
| ATTCATCTTTGCTTCAATTC+AGG | 0.297404 | 7_1:-40517100 | None:intergenic |
| ATAAGTGCATGCCAAGGTTT+TGG | 0.306516 | 7_1:-40516324 | None:intergenic |
| TGAGATATAGTGCTAATTAA+AGG | 0.306822 | 7_1:+40517420 | Msa1019220:three_prime_UTR |
| ACTAGAAGTTGAAGTTTCTT+TGG | 0.309086 | 7_1:-40514880 | None:intergenic |
| ACAATTGTTCAGATGGGATT+TGG | 0.313660 | 7_1:+40516874 | Msa1019220:CDS |
| ATTCACAATAATATTTCTAA+TGG | 0.321191 | 7_1:+40516256 | Msa1019220:CDS |
| ATGAATGAAAGATGTAAATT+TGG | 0.324289 | 7_1:-40513952 | None:intergenic |
| TTCTGCAACAGTTGAATTCA+TGG | 0.325717 | 7_1:-40514532 | None:intergenic |
| GAATCAACAATCTCTGAAAA+TGG | 0.326758 | 7_1:+40514798 | Msa1019220:CDS |
| ATTGTTGAGATGTTCAATTT+TGG | 0.329946 | 7_1:-40514507 | None:intergenic |
| GAAATATTATTGTGAATTGC+TGG | 0.332246 | 7_1:-40516250 | None:intergenic |
| TTACTCTTTCTGCAAGACTA+TGG | 0.332464 | 7_1:-40515235 | None:intergenic |
| CTTCTCCTTATGTGAATTCA+AGG | 0.338861 | 7_1:+40514829 | Msa1019220:CDS |
| TCATCTTCAGAGAATGTTAA+TGG | 0.340270 | 7_1:-40516844 | None:intergenic |
| TCTTGTCCCTGGTTGCAATA+AGG | 0.355254 | 7_1:+40515558 | Msa1019220:CDS |
| TGATCAAAGCTTAATTTCAT+AGG | 0.358785 | 7_1:-40517065 | None:intergenic |
| TGGCATAAACCACCATCTAA+TGG | 0.361230 | 7_1:-40516304 | None:intergenic |
| GCTGCAAAATTCTCTTGCTT+TGG | 0.361360 | 7_1:+40514585 | Msa1019220:CDS |
| GAATTGTTCTACTCAATTGC+AGG | 0.367833 | 7_1:+40514746 | Msa1019220:CDS |
| GGCATAAACCACCATCTAAT+GGG | 0.369801 | 7_1:-40516303 | None:intergenic |
| CAGTGGCCAATTTCATAGAT+AGG | 0.382519 | 7_1:-40515981 | None:intergenic |
| ATTGATGTAGTTGTGATGGG+GGG | 0.388308 | 7_1:-40513806 | None:intergenic |
| CATTTGATTAAAGATTGAAT+TGG | 0.392918 | 7_1:-40513992 | None:intergenic |
| CCTCAGCACCATCCTATTAT+GGG | 0.394260 | 7_1:+40516209 | Msa1019220:CDS |
| GTGCCATAATAATAAGAATC+TGG | 0.403656 | 7_1:-40517391 | None:intergenic |
| AGGAATCTAATGGGAATATT+GGG | 0.404291 | 7_1:-40516189 | None:intergenic |
| GATCCAAGTTCTTTCAATGA+TGG | 0.405954 | 7_1:-40514705 | None:intergenic |
| AATTCTCTTGCTTTGGAAGT+AGG | 0.408436 | 7_1:+40514592 | Msa1019220:CDS |
| TTCAAATTATGAAATTGTAT+TGG | 0.408593 | 7_1:-40516919 | None:intergenic |
| CTGGTGTTGTTGCCCATAAT+AGG | 0.412733 | 7_1:-40516221 | None:intergenic |
| ATCTTGATTCTGTATTCTGT+TGG | 0.413340 | 7_1:+40517367 | Msa1019220:three_prime_UTR |
| TCAAAGATCTACTCCATTGT+TGG | 0.414601 | 7_1:+40514650 | Msa1019220:CDS |
| GATGGTGCTGAGGAATCTAA+TGG | 0.422338 | 7_1:-40516199 | None:intergenic |
| GTTGTTGACTTATCCCATAT+TGG | 0.422874 | 7_1:-40514255 | None:intergenic |
| GCAGAATTCTCAACTGATCC+TGG | 0.423123 | 7_1:+40514549 | Msa1019220:CDS |
| TATTATTCCTTCTAGGTCAC+TGG | 0.424071 | 7_1:+40515656 | Msa1019220:intron |
| TGATTCAGCACTTAGTTCAA+TGG | 0.424451 | 7_1:+40514299 | Msa1019220:CDS |
| CTAAGTGGATTTAATGAAGC+TGG | 0.440757 | 7_1:+40516352 | Msa1019220:CDS |
| GATCAAAGCTTAATTTCATA+GGG | 0.441448 | 7_1:-40517064 | None:intergenic |
| TTTGTCATCAGAGAATTGAT+TGG | 0.446145 | 7_1:+40514366 | Msa1019220:CDS |
| ATTGGTAAATTAGGAAACAT+TGG | 0.447086 | 7_1:+40514384 | Msa1019220:CDS |
| AACTCAGTGGACCCATTAGA+TGG | 0.450062 | 7_1:+40516292 | Msa1019220:CDS |
| GAATTGAAGCAAAGATGAAT+AGG | 0.450877 | 7_1:+40517103 | Msa1019220:three_prime_UTR |
| TTAGCACTATATCTCACAAT+TGG | 0.451268 | 7_1:-40517413 | None:intergenic |
| AATAATTGACAAAGTGAAGA+TGG | 0.455330 | 7_1:-40517467 | None:intergenic |
| ATGTAATCCTTTGGTGCCTC+AGG | 0.463142 | 7_1:-40515176 | None:intergenic |
| AATGAAAAGCTAAGGAAAAG+TGG | 0.464683 | 7_1:-40513873 | None:intergenic |
| AGTCCATCATTGAAAGAACT+TGG | 0.466629 | 7_1:+40514702 | Msa1019220:CDS |
| AAAATTGTCATTTGACATGT+TGG | 0.469622 | 7_1:-40514346 | None:intergenic |
| AAGTGAAGATGGATAATGAT+AGG | 0.471377 | 7_1:-40517456 | None:intergenic |
| CTGACATGAATGTAATCCTT+TGG | 0.473631 | 7_1:-40515185 | None:intergenic |
| TAATGGGTCCACTGAGTTGT+GGG | 0.475871 | 7_1:-40516287 | None:intergenic |
| TTCAATTCAGGCGTAATGAA+TGG | 0.481544 | 7_1:-40517088 | None:intergenic |
| AAATATTATTGTGAATTGCT+GGG | 0.490799 | 7_1:-40516249 | None:intergenic |
| AAGCAGAGGAAGAATCAAAA+GGG | 0.491073 | 7_1:+40515096 | Msa1019220:CDS |
| CTAATGGGTCCACTGAGTTG+TGG | 0.497924 | 7_1:-40516288 | None:intergenic |
| ATGGCTTAATGATAATACAT+AGG | 0.504133 | 7_1:-40517170 | None:intergenic |
| CCTCAACACAATTGTTCAGA+TGG | 0.508498 | 7_1:+40516867 | Msa1019220:CDS |
| GTGGGATATGAGTGGAAAGG+AGG | 0.512720 | 7_1:-40513930 | None:intergenic |
| GATTGATGTAGTTGTGATGG+GGG | 0.513050 | 7_1:-40513807 | None:intergenic |
| CTTGAATTCACATAAGGAGA+AGG | 0.513147 | 7_1:-40514828 | None:intergenic |
| GCAGCTCTTTCTGCAAAACC+AGG | 0.515215 | 7_1:-40514567 | None:intergenic |
| GTGGAAAGGAGGGTGTGAAA+AGG | 0.515484 | 7_1:-40513919 | None:intergenic |
| TTTGGAAGTAGGAGTTTCAA+TGG | 0.516264 | 7_1:+40514603 | Msa1019220:CDS |
| AAAGCAGAGGAAGAATCAAA+AGG | 0.521509 | 7_1:+40515095 | Msa1019220:CDS |
| GGGATTGATGTAGTTGTGAT+GGG | 0.523095 | 7_1:-40513809 | None:intergenic |
| GGATTGATGTAGTTGTGATG+GGG | 0.527217 | 7_1:-40513808 | None:intergenic |
| TTGATGTAGTTGTGATGGGG+GGG | 0.530546 | 7_1:-40513805 | None:intergenic |
| AATGAAAGATGTAAATTTGG+TGG | 0.531045 | 7_1:-40513949 | None:intergenic |
| TGGCTTAATGATAATACATA+GGG | 0.531706 | 7_1:-40517169 | None:intergenic |
| AAAAGAAAAGTTTCTTCCAA+AGG | 0.532200 | 7_1:+40514852 | Msa1019220:CDS |
| GGAAGATGTAATGTATCAGT+TGG | 0.539889 | 7_1:-40513898 | None:intergenic |
| TGATGAGATCTCACAAACAT+TGG | 0.547828 | 7_1:+40514416 | Msa1019220:CDS |
| ATACAATTTCATAATTTGAA+CGG | 0.549604 | 7_1:+40516922 | Msa1019220:CDS |
| AACCATCTTCAATGCCTACA+TGG | 0.550038 | 7_1:+40514187 | Msa1019220:CDS |
| CTTCTACAAGATCTTGTCCC+TGG | 0.550938 | 7_1:+40515547 | Msa1019220:CDS |
| ATTTAATGAAGCTGGCTCAC+AGG | 0.551026 | 7_1:+40516360 | Msa1019220:CDS |
| GGGGATTGATGTAGTTGTGA+TGG | 0.551189 | 7_1:-40513810 | None:intergenic |
| CTCAATACTAAAATCCACCT+TGG | 0.554681 | 7_1:-40516010 | None:intergenic |
| AAGCGTATGAAAACAAATGA+AGG | 0.556302 | 7_1:+40515047 | Msa1019220:CDS |
| AGATAACATGAAGACAAAAG+AGG | 0.556765 | 7_1:-40517226 | None:intergenic |
| ATGGTGCTGAGGAATCTAAT+GGG | 0.559576 | 7_1:-40516198 | None:intergenic |
| TTAAAATCATGGAAAGTGAA+AGG | 0.560569 | 7_1:-40517264 | None:intergenic |
| GGAGGGAGAAAATCAGTGAA+AGG | 0.560766 | 7_1:+40515518 | Msa1019220:CDS |
| GATGAAAGTGATTGCCATGT+AGG | 0.566700 | 7_1:-40514201 | None:intergenic |
| TAATCCTTTGGTGCCTCAGG+AGG | 0.569593 | 7_1:-40515173 | None:intergenic |
| TACCAACCTTATTGCAACCA+GGG | 0.572746 | 7_1:-40515564 | None:intergenic |
| TGGGATATGAGTGGAAAGGA+GGG | 0.574948 | 7_1:-40513929 | None:intergenic |
| AGTTGGTAAATGAAAAGCTA+AGG | 0.575953 | 7_1:-40513881 | None:intergenic |
| ATCATTGCAGCGTCAAGTTG+AGG | 0.580066 | 7_1:+40515718 | Msa1019220:CDS |
| AAAACCTCCTGAGGCACCAA+AGG | 0.580225 | 7_1:+40515169 | Msa1019220:CDS |
| ATGCACTTATCTTCACTAAG+TGG | 0.581033 | 7_1:+40516337 | Msa1019220:CDS |
| CTCAACACAATTGTTCAGAT+GGG | 0.581106 | 7_1:+40516868 | Msa1019220:CDS |
| GGTGGTTTATGCCAAAACCT+TGG | 0.587041 | 7_1:+40516313 | Msa1019220:CDS |
| TGCCATGTAGGCATTGAAGA+TGG | 0.593613 | 7_1:-40514189 | None:intergenic |
| ATGAAAGATGTAAATTTGGT+GGG | 0.596114 | 7_1:-40513948 | None:intergenic |
| AACTTCTAGTAACCCTGCAA+TGG | 0.607773 | 7_1:+40514893 | Msa1019220:CDS |
| TTACCAACCTTATTGCAACC+AGG | 0.614090 | 7_1:-40515565 | None:intergenic |
| AGAGAGATCCAGCAAGAACA+AGG | 0.616539 | 7_1:-40513773 | None:intergenic |
| ATGTTGGAATTTGAAGCTGC+AGG | 0.621377 | 7_1:-40514330 | None:intergenic |
| CCATCTGAACAATTGTGTTG+AGG | 0.622085 | 7_1:-40516867 | None:intergenic |
| GGTACAAATAGTAATAATGG+AGG | 0.627017 | 7_1:+40515119 | Msa1019220:CDS |
| AAAATTGAACATCTCAACAA+TGG | 0.629044 | 7_1:+40514509 | Msa1019220:CDS |
| TAAATTTGGTGGGATATGAG+TGG | 0.635559 | 7_1:-40513938 | None:intergenic |
| TGATCAAAATGATGTTGAGG+TGG | 0.637803 | 7_1:-40514159 | None:intergenic |
| TGTTGTTGCCCATAATAGGA+TGG | 0.639120 | 7_1:-40516217 | None:intergenic |
| GATTGATCAAAATGATGTTG+AGG | 0.642732 | 7_1:-40514162 | None:intergenic |
| GTGAAGATAAGTGCATGCCA+AGG | 0.643919 | 7_1:-40516330 | None:intergenic |
| AAATGGTAAAGTAAAAGCAG+AGG | 0.646618 | 7_1:+40515082 | Msa1019220:CDS |
| ATTCATGTCAGAGCAAGAAG+AGG | 0.647303 | 7_1:+40515197 | Msa1019220:CDS |
| AGCAGAGGAAGAATCAAAAG+GGG | 0.649630 | 7_1:+40515097 | Msa1019220:CDS |
| TTGGTGGGATATGAGTGGAA+AGG | 0.655839 | 7_1:-40513933 | None:intergenic |
| GAGCAATTCAAAACCTCCTG+AGG | 0.656462 | 7_1:+40515160 | Msa1019220:CDS |
| CCCATAATAGGATGGTGCTG+AGG | 0.665748 | 7_1:-40516209 | None:intergenic |
| TGAAGATGGATAATGATAGG+TGG | 0.669243 | 7_1:-40517453 | None:intergenic |
| ATCAAAGCTTAATTTCATAG+GGG | 0.673297 | 7_1:-40517063 | None:intergenic |
| AACTGTGACCCACAACTCAG+TGG | 0.673850 | 7_1:+40516279 | Msa1019220:CDS |
| TCAGTGGACCCATTAGATGG+TGG | 0.680214 | 7_1:+40516295 | Msa1019220:CDS |
| ATCCACCTTGGTGTTAACAG+TGG | 0.694539 | 7_1:-40515998 | None:intergenic |
| GCAGAGGAAGAATCAAAAGG+GGG | 0.717660 | 7_1:+40515098 | Msa1019220:CDS |
| ATTGGCCACTGTTAACACCA+AGG | 0.721123 | 7_1:+40515993 | Msa1019220:CDS |
| GGCCACTGTTAACACCAAGG+TGG | 0.728183 | 7_1:+40515996 | Msa1019220:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATAATAATAATAATAA+TGG | - | chr7_1:40517192-40517211 | None:intergenic | 0.0% |
| !! | TTATTATTATTATTATAATT+AGG | + | chr7_1:40517192-40517211 | Msa1019220:three_prime_UTR | 0.0% |
| !! | TTGAAAAATTAATTTATTGA+AGG | - | chr7_1:40514062-40514081 | None:intergenic | 10.0% |
| !! | AATAAAGTTAATTGTATTAT+AGG | + | chr7_1:40516405-40516424 | Msa1019220:intron | 10.0% |
| !! | ATAAAGTTAATTGTATTATA+GGG | + | chr7_1:40516406-40516425 | Msa1019220:intron | 10.0% |
| !!! | ATTTTTTATAAATGATTAGA+TGG | - | chr7_1:40516529-40516548 | None:intergenic | 10.0% |
| !!! | CAACATAATTTTTTTTTATA+AGG | - | chr7_1:40517002-40517021 | None:intergenic | 10.0% |
| !! | AGATAAAAAAATTAAAATCA+TGG | - | chr7_1:40517278-40517297 | None:intergenic | 10.0% |
| !!! | TGATTTTAATTTTTTTATCT+TGG | + | chr7_1:40517278-40517297 | Msa1019220:three_prime_UTR | 10.0% |
| !!! | GATTTTAATTTTTTTATCTT+GGG | + | chr7_1:40517279-40517298 | Msa1019220:three_prime_UTR | 10.0% |
| !!! | ATTTTAATTTTTTTATCTTG+GGG | + | chr7_1:40517280-40517299 | Msa1019220:three_prime_UTR | 10.0% |
| !! | AATGACTAATTTAATTAAGA+GGG | - | chr7_1:40514955-40514974 | None:intergenic | 15.0% |
| !! | AAATGACTAATTTAATTAAG+AGG | - | chr7_1:40514956-40514975 | None:intergenic | 15.0% |
| !!! | TGTAAACTAATTTTTGTTAT+AGG | + | chr7_1:40515492-40515511 | Msa1019220:intron | 15.0% |
| !! | GGTAATAATTAGATAAATTA+AGG | + | chr7_1:40515583-40515602 | Msa1019220:intron | 15.0% |
| !! | TTGTTTATATTATAAATTGG+AGG | + | chr7_1:40515864-40515883 | Msa1019220:intron | 15.0% |
| !! | TGTTTATATTATAAATTGGA+GGG | + | chr7_1:40515865-40515884 | Msa1019220:intron | 15.0% |
| !!! | ATTCACAATAATATTTCTAA+TGG | + | chr7_1:40516256-40516275 | Msa1019220:CDS | 15.0% |
| !!! | ACATTTTAACTTTACAAATT+AGG | - | chr7_1:40516503-40516522 | None:intergenic | 15.0% |
| !!! | TAATTTGTAAAGTTAAAATG+TGG | + | chr7_1:40516502-40516521 | Msa1019220:intron | 15.0% |
| !! | TTATAATAATTCATACGATT+TGG | - | chr7_1:40516552-40516571 | None:intergenic | 15.0% |
| !! | TTCAAATTATGAAATTGTAT+TGG | - | chr7_1:40516922-40516941 | None:intergenic | 15.0% |
| !! | ATACAATTTCATAATTTGAA+CGG | + | chr7_1:40516922-40516941 | Msa1019220:CDS | 15.0% |
| !!! | ACATATACTTTTTTTATGTT+TGG | - | chr7_1:40516955-40516974 | None:intergenic | 15.0% |
| !!! | TTTTAATTTTTTTATCTTGG+GGG | + | chr7_1:40517281-40517300 | Msa1019220:three_prime_UTR | 15.0% |
| !!! | ATTCATAAAAAGAATTTTGA+TGG | + | chr7_1:40517523-40517542 | Msa1019220:three_prime_UTR | 15.0% |
| !!! | TTCATAAAAAGAATTTTGAT+GGG | + | chr7_1:40517524-40517543 | Msa1019220:three_prime_UTR | 15.0% |
| !! | ATGAATGAAAGATGTAAATT+TGG | - | chr7_1:40513955-40513974 | None:intergenic | 20.0% |
| !! | CATTTGATTAAAGATTGAAT+TGG | - | chr7_1:40513995-40514014 | None:intergenic | 20.0% |
| !!! | AAAGAATTGATTTTCCATTA+AGG | - | chr7_1:40514118-40514137 | None:intergenic | 20.0% |
| !! | TTTCATATTCTAAATCCAAA+AGG | + | chr7_1:40514973-40514992 | Msa1019220:intron | 20.0% |
| !! | TTCATATTCTAAATCCAAAA+GGG | + | chr7_1:40514974-40514993 | Msa1019220:intron | 20.0% |
| !!! | CATTTTTGTTTTTGCAATAT+AGG | + | chr7_1:40514998-40515017 | Msa1019220:intron | 20.0% |
| !!! | ACTAATTTTTGTTATAGGTT+AGG | + | chr7_1:40515497-40515516 | Msa1019220:intron | 20.0% |
| !! | TATGAATTATTATTCCTTCT+AGG | + | chr7_1:40515649-40515668 | Msa1019220:intron | 20.0% |
| !!! | GCATACATAACAATTTTATT+TGG | + | chr7_1:40515776-40515795 | Msa1019220:intron | 20.0% |
| !!! | TCAATTTGTTGACTTTTTTT+TGG | + | chr7_1:40516125-40516144 | Msa1019220:intron | 20.0% |
| !! | GTTTCAATCAAATAATTCTT+TGG | + | chr7_1:40516162-40516181 | Msa1019220:CDS | 20.0% |
| !! | AAATATTATTGTGAATTGCT+GGG | - | chr7_1:40516252-40516271 | None:intergenic | 20.0% |
| !! | TACTGAAAAATGAAAATCAT+TGG | - | chr7_1:40516823-40516842 | None:intergenic | 20.0% |
| !! | ACATCAACAAGAAATTTAAT+TGG | + | chr7_1:40517141-40517160 | Msa1019220:three_prime_UTR | 20.0% |
| ! | ATGAAAGATGTAAATTTGGT+GGG | - | chr7_1:40513951-40513970 | None:intergenic | 25.0% |
| ! | AATGAAAGATGTAAATTTGG+TGG | - | chr7_1:40513952-40513971 | None:intergenic | 25.0% |
| !! | ATCCTTAATCTTTTCCTTAA+TGG | + | chr7_1:40514101-40514120 | Msa1019220:exon | 25.0% |
| ! | TTCCATTAAGGAAAAGATTA+AGG | - | chr7_1:40514106-40514125 | None:intergenic | 25.0% |
| !!! | ATTGTTTTTACACACCAATA+TGG | + | chr7_1:40514241-40514260 | Msa1019220:CDS | 25.0% |
| !!! | TTGTTTTTACACACCAATAT+GGG | + | chr7_1:40514242-40514261 | Msa1019220:CDS | 25.0% |
| !! | AAAATTGTCATTTGACATGT+TGG | - | chr7_1:40514349-40514368 | None:intergenic | 25.0% |
| ! | AGAGAATTGATTGGTAAATT+AGG | + | chr7_1:40514375-40514394 | Msa1019220:CDS | 25.0% |
| ! | ATTGGTAAATTAGGAAACAT+TGG | + | chr7_1:40514384-40514403 | Msa1019220:CDS | 25.0% |
| !! | ATTGTTGAGATGTTCAATTT+TGG | - | chr7_1:40514510-40514529 | None:intergenic | 25.0% |
| ! | AAAATTGAACATCTCAACAA+TGG | + | chr7_1:40514509-40514528 | Msa1019220:CDS | 25.0% |
| ! | AAAAGAAAAGTTTCTTCCAA+AGG | + | chr7_1:40514852-40514871 | Msa1019220:CDS | 25.0% |
| !!! | AATTTTAACTTACCATTGCA+GGG | - | chr7_1:40514908-40514927 | None:intergenic | 25.0% |
| !! | AAAAACAAAAATGACCCTTT+TGG | - | chr7_1:40514991-40515010 | None:intergenic | 25.0% |
| ! | GAAGGTGAAAAAATTGAAAA+TGG | + | chr7_1:40515065-40515084 | Msa1019220:CDS | 25.0% |
| ! | ATGATTGTTAGTGTCAATTA+TGG | - | chr7_1:40515284-40515303 | None:intergenic | 25.0% |
| !! | TCGTATTATAGCATATTTTG+AGG | - | chr7_1:40515397-40515416 | None:intergenic | 25.0% |
| !!! | AATTTTTGTTATAGGTTAGG+AGG | + | chr7_1:40515500-40515519 | Msa1019220:intron | 25.0% |
| !!! | ATTTTTGTTATAGGTTAGGA+GGG | + | chr7_1:40515501-40515520 | Msa1019220:intron | 25.0% |
| ! | TTCAAAAATTTATCAACCTC+AGG | + | chr7_1:40515823-40515842 | Msa1019220:intron | 25.0% |
| ! | TCTCAAAAGATGTAAGTTTA+AGG | + | chr7_1:40516040-40516059 | Msa1019220:intron | 25.0% |
| ! | CTCAAAAGATGTAAGTTTAA+GGG | + | chr7_1:40516041-40516060 | Msa1019220:intron | 25.0% |
| ! | GAAATATTATTGTGAATTGC+TGG | - | chr7_1:40516253-40516272 | None:intergenic | 25.0% |
| !! | AGGTCTAAAATACAAAAGTT+AGG | - | chr7_1:40516483-40516502 | None:intergenic | 25.0% |
| !! | ACATTCCGACTTTATATTTT+AGG | + | chr7_1:40516639-40516658 | Msa1019220:intron | 25.0% |
| ! | CTAGACCTAAAATATAAAGT+CGG | - | chr7_1:40516647-40516666 | None:intergenic | 25.0% |
| ! | TAGTTTATAAAATTCGAACG+TGG | + | chr7_1:40516664-40516683 | Msa1019220:intron | 25.0% |
| !!! | ATTTTCCAGTTATTTTGAGA+CGG | - | chr7_1:40516691-40516710 | None:intergenic | 25.0% |
| ! | ATCAAAGCTTAATTTCATAG+GGG | - | chr7_1:40517066-40517085 | None:intergenic | 25.0% |
| ! | GATCAAAGCTTAATTTCATA+GGG | - | chr7_1:40517067-40517086 | None:intergenic | 25.0% |
| ! | TGATCAAAGCTTAATTTCAT+AGG | - | chr7_1:40517068-40517087 | None:intergenic | 25.0% |
| ! | TGGCTTAATGATAATACATA+GGG | - | chr7_1:40517172-40517191 | None:intergenic | 25.0% |
| ! | ATGGCTTAATGATAATACAT+AGG | - | chr7_1:40517173-40517192 | None:intergenic | 25.0% |
| ! | TTAAAATCATGGAAAGTGAA+AGG | - | chr7_1:40517267-40517286 | None:intergenic | 25.0% |
| ! | CTATTCACTGTAAAATCTTT+AGG | + | chr7_1:40517344-40517363 | Msa1019220:three_prime_UTR | 25.0% |
| ! | TGAGATATAGTGCTAATTAA+AGG | + | chr7_1:40517420-40517439 | Msa1019220:three_prime_UTR | 25.0% |
| ! | AATAATTGACAAAGTGAAGA+TGG | - | chr7_1:40517470-40517489 | None:intergenic | 25.0% |
| AATGAAAAGCTAAGGAAAAG+TGG | - | chr7_1:40513876-40513895 | None:intergenic | 30.0% | |
| !! | AGTTGGTAAATGAAAAGCTA+AGG | - | chr7_1:40513884-40513903 | None:intergenic | 30.0% |
| GATTGATCAAAATGATGTTG+AGG | - | chr7_1:40514165-40514184 | None:intergenic | 30.0% | |
| TTGGTGTGTAAAAACAATCT+TGG | - | chr7_1:40514239-40514258 | None:intergenic | 30.0% | |
| TTTGTCATCAGAGAATTGAT+TGG | + | chr7_1:40514366-40514385 | Msa1019220:CDS | 30.0% | |
| !! | ATTTTGGAGGAGAATTCAAA+GGG | - | chr7_1:40514494-40514513 | None:intergenic | 30.0% |
| !! | AATTTTGGAGGAGAATTCAA+AGG | - | chr7_1:40514495-40514514 | None:intergenic | 30.0% |
| ! | AGTTTTCCATTTTCCAACAA+TGG | - | chr7_1:40514666-40514685 | None:intergenic | 30.0% |
| ! | GAATCAACAATCTCTGAAAA+TGG | + | chr7_1:40514798-40514817 | Msa1019220:CDS | 30.0% |
| ! | CTTTTCCTTGAATTCACATA+AGG | - | chr7_1:40514837-40514856 | None:intergenic | 30.0% |
| !!! | AGTTTCTTTGGTTTTTCCTT+TGG | - | chr7_1:40514871-40514890 | None:intergenic | 30.0% |
| ACTAGAAGTTGAAGTTTCTT+TGG | - | chr7_1:40514883-40514902 | None:intergenic | 30.0% | |
| !!! | CAATTTTAACTTACCATTGC+AGG | - | chr7_1:40514909-40514928 | None:intergenic | 30.0% |
| AAGCGTATGAAAACAAATGA+AGG | + | chr7_1:40515047-40515066 | Msa1019220:CDS | 30.0% | |
| AAATGGTAAAGTAAAAGCAG+AGG | + | chr7_1:40515082-40515101 | Msa1019220:CDS | 30.0% | |
| GGTACAAATAGTAATAATGG+AGG | + | chr7_1:40515119-40515138 | Msa1019220:CDS | 30.0% | |
| CACATATTGTGGCAATATAA+AGG | - | chr7_1:40515334-40515353 | None:intergenic | 30.0% | |
| ! | ACCACAATTTAAAACCATGA+TGG | + | chr7_1:40515435-40515454 | Msa1019220:intron | 30.0% |
| TAACATGTATATTGCCATCA+TGG | - | chr7_1:40515452-40515471 | None:intergenic | 30.0% | |
| ATGATGGCAATATACATGTT+AGG | + | chr7_1:40515451-40515470 | Msa1019220:intron | 30.0% | |
| AAGTCATGTAATAATTCCTG+AGG | - | chr7_1:40515842-40515861 | None:intergenic | 30.0% | |
| AGGAATCTAATGGGAATATT+GGG | - | chr7_1:40516192-40516211 | None:intergenic | 30.0% | |
| ! | ACAGGTAATCTATTTCTTCT+AGG | + | chr7_1:40516378-40516397 | Msa1019220:intron | 30.0% |
| AACTGTCAAATCAAGATTAG+TGG | + | chr7_1:40516613-40516632 | Msa1019220:intron | 30.0% | |
| ! | AAAAGTGCATGAAACTAGAA+TGG | - | chr7_1:40516778-40516797 | None:intergenic | 30.0% |
| TCATCTTCAGAGAATGTTAA+TGG | - | chr7_1:40516847-40516866 | None:intergenic | 30.0% | |
| ATTCATCTTTGCTTCAATTC+AGG | - | chr7_1:40517103-40517122 | None:intergenic | 30.0% | |
| GAATTGAAGCAAAGATGAAT+AGG | + | chr7_1:40517103-40517122 | Msa1019220:three_prime_UTR | 30.0% | |
| AGATAACATGAAGACAAAAG+AGG | - | chr7_1:40517229-40517248 | None:intergenic | 30.0% | |
| !!! | TAATTTTTTTATCTTGGGGG+TGG | + | chr7_1:40517284-40517303 | Msa1019220:three_prime_UTR | 30.0% |
| !!! | AATTTTTTTATCTTGGGGGT+GGG | + | chr7_1:40517285-40517304 | Msa1019220:three_prime_UTR | 30.0% |
| ATCTTGATTCTGTATTCTGT+TGG | + | chr7_1:40517367-40517386 | Msa1019220:three_prime_UTR | 30.0% | |
| GGTCCAGATTCTTATTATTA+TGG | + | chr7_1:40517388-40517407 | Msa1019220:three_prime_UTR | 30.0% | |
| GTGCCATAATAATAAGAATC+TGG | - | chr7_1:40517394-40517413 | None:intergenic | 30.0% | |
| TTAGCACTATATCTCACAAT+TGG | - | chr7_1:40517416-40517435 | None:intergenic | 30.0% | |
| AAGTGAAGATGGATAATGAT+AGG | - | chr7_1:40517459-40517478 | None:intergenic | 30.0% | |
| GGAAGATGTAATGTATCAGT+TGG | - | chr7_1:40513901-40513920 | None:intergenic | 35.0% | |
| ! | TAAATTTGGTGGGATATGAG+TGG | - | chr7_1:40513941-40513960 | None:intergenic | 35.0% |
| TGATCAAAATGATGTTGAGG+TGG | - | chr7_1:40514162-40514181 | None:intergenic | 35.0% | |
| !! | GTTGTTGACTTATCCCATAT+TGG | - | chr7_1:40514258-40514277 | None:intergenic | 35.0% |
| TGATTCAGCACTTAGTTCAA+TGG | + | chr7_1:40514299-40514318 | Msa1019220:CDS | 35.0% | |
| TGATGAGATCTCACAAACAT+TGG | + | chr7_1:40514416-40514435 | Msa1019220:CDS | 35.0% | |
| !! | TTTTGGAGGAGAATTCAAAG+GGG | - | chr7_1:40514493-40514512 | None:intergenic | 35.0% |
| ! | GTTGAGATGTTCAATTTTGG+AGG | - | chr7_1:40514507-40514526 | None:intergenic | 35.0% |
| TTCTGCAACAGTTGAATTCA+TGG | - | chr7_1:40514535-40514554 | None:intergenic | 35.0% | |
| !! | AATTCTCTTGCTTTGGAAGT+AGG | + | chr7_1:40514592-40514611 | Msa1019220:CDS | 35.0% |
| TTTGGAAGTAGGAGTTTCAA+TGG | + | chr7_1:40514603-40514622 | Msa1019220:CDS | 35.0% | |
| TCAAAGATCTACTCCATTGT+TGG | + | chr7_1:40514650-40514669 | Msa1019220:CDS | 35.0% | |
| TCTACTCCATTGTTGGAAAA+TGG | + | chr7_1:40514657-40514676 | Msa1019220:CDS | 35.0% | |
| AGTCCATCATTGAAAGAACT+TGG | + | chr7_1:40514702-40514721 | Msa1019220:CDS | 35.0% | |
| GATCCAAGTTCTTTCAATGA+TGG | - | chr7_1:40514708-40514727 | None:intergenic | 35.0% | |
| GAATTGTTCTACTCAATTGC+AGG | + | chr7_1:40514746-40514765 | Msa1019220:CDS | 35.0% | |
| CTTGAATTCACATAAGGAGA+AGG | - | chr7_1:40514831-40514850 | None:intergenic | 35.0% | |
| CTTCTCCTTATGTGAATTCA+AGG | + | chr7_1:40514829-40514848 | Msa1019220:CDS | 35.0% | |
| AAAGCAGAGGAAGAATCAAA+AGG | + | chr7_1:40515095-40515114 | Msa1019220:CDS | 35.0% | |
| AAGCAGAGGAAGAATCAAAA+GGG | + | chr7_1:40515096-40515115 | Msa1019220:CDS | 35.0% | |
| ! | GGGGGTACAAATAGTAATAA+TGG | + | chr7_1:40515116-40515135 | Msa1019220:CDS | 35.0% |
| CTGACATGAATGTAATCCTT+TGG | - | chr7_1:40515188-40515207 | None:intergenic | 35.0% | |
| TTACTCTTTCTGCAAGACTA+TGG | - | chr7_1:40515238-40515257 | None:intergenic | 35.0% | |
| TGTCACATTGTCACATATTG+TGG | - | chr7_1:40515345-40515364 | None:intergenic | 35.0% | |
| TGCGAAAAAAATTGTTGTCG+CGG | + | chr7_1:40515368-40515387 | Msa1019220:intron | 35.0% | |
| !!! | GCCATCATGGTTTTAAATTG+TGG | - | chr7_1:40515439-40515458 | None:intergenic | 35.0% |
| TATTATTCCTTCTAGGTCAC+TGG | + | chr7_1:40515656-40515675 | Msa1019220:intron | 35.0% | |
| GCAGTTCCTATCTATGAAAT+TGG | + | chr7_1:40515975-40515994 | Msa1019220:intron | 35.0% | |
| CTCAATACTAAAATCCACCT+TGG | - | chr7_1:40516013-40516032 | None:intergenic | 35.0% | |
| GAGGAATCTAATGGGAATAT+TGG | - | chr7_1:40516193-40516212 | None:intergenic | 35.0% | |
| ATGCACTTATCTTCACTAAG+TGG | + | chr7_1:40516337-40516356 | Msa1019220:CDS | 35.0% | |
| ! | CTAAGTGGATTTAATGAAGC+TGG | + | chr7_1:40516352-40516371 | Msa1019220:CDS | 35.0% |
| AATCTCTGATCTTGATCAGA+CGG | - | chr7_1:40516455-40516474 | None:intergenic | 35.0% | |
| CTCAACACAATTGTTCAGAT+GGG | + | chr7_1:40516868-40516887 | Msa1019220:CDS | 35.0% | |
| ACAATTGTTCAGATGGGATT+TGG | + | chr7_1:40516874-40516893 | Msa1019220:CDS | 35.0% | |
| !!! | AACTTGTTTTGTCCAAATGC+AGG | + | chr7_1:40517027-40517046 | Msa1019220:intron | 35.0% |
| TTCAATTCAGGCGTAATGAA+TGG | - | chr7_1:40517091-40517110 | None:intergenic | 35.0% | |
| TGAAGATGGATAATGATAGG+TGG | - | chr7_1:40517456-40517475 | None:intergenic | 35.0% | |
| ! | ATTGATGTAGTTGTGATGGG+GGG | - | chr7_1:40513809-40513828 | None:intergenic | 40.0% |
| GATTGATGTAGTTGTGATGG+GGG | - | chr7_1:40513810-40513829 | None:intergenic | 40.0% | |
| GGATTGATGTAGTTGTGATG+GGG | - | chr7_1:40513811-40513830 | None:intergenic | 40.0% | |
| GGGATTGATGTAGTTGTGAT+GGG | - | chr7_1:40513812-40513831 | None:intergenic | 40.0% | |
| AACCATCTTCAATGCCTACA+TGG | + | chr7_1:40514187-40514206 | Msa1019220:CDS | 40.0% | |
| GATGAAAGTGATTGCCATGT+AGG | - | chr7_1:40514204-40514223 | None:intergenic | 40.0% | |
| ! | ATGTTGGAATTTGAAGCTGC+AGG | - | chr7_1:40514333-40514352 | None:intergenic | 40.0% |
| GCTGCAAAATTCTCTTGCTT+TGG | + | chr7_1:40514585-40514604 | Msa1019220:CDS | 40.0% | |
| AACTTCTAGTAACCCTGCAA+TGG | + | chr7_1:40514893-40514912 | Msa1019220:CDS | 40.0% | |
| AGCAGAGGAAGAATCAAAAG+GGG | + | chr7_1:40515097-40515116 | Msa1019220:CDS | 40.0% | |
| ATTCATGTCAGAGCAAGAAG+AGG | + | chr7_1:40515197-40515216 | Msa1019220:CDS | 40.0% | |
| TACCAACCTTATTGCAACCA+GGG | - | chr7_1:40515567-40515586 | None:intergenic | 40.0% | |
| TTACCAACCTTATTGCAACC+AGG | - | chr7_1:40515568-40515587 | None:intergenic | 40.0% | |
| CAGTGGCCAATTTCATAGAT+AGG | - | chr7_1:40515984-40516003 | None:intergenic | 40.0% | |
| !! | AGTTTAAGGGCTCTAGACAA+TGG | + | chr7_1:40516054-40516073 | Msa1019220:intron | 40.0% |
| ! | ATGGTGCTGAGGAATCTAAT+GGG | - | chr7_1:40516201-40516220 | None:intergenic | 40.0% |
| TGTTGTTGCCCATAATAGGA+TGG | - | chr7_1:40516220-40516239 | None:intergenic | 40.0% | |
| GGCATAAACCACCATCTAAT+GGG | - | chr7_1:40516306-40516325 | None:intergenic | 40.0% | |
| TGGCATAAACCACCATCTAA+TGG | - | chr7_1:40516307-40516326 | None:intergenic | 40.0% | |
| ! | ATAAGTGCATGCCAAGGTTT+TGG | - | chr7_1:40516327-40516346 | None:intergenic | 40.0% |
| ! | ATTTAATGAAGCTGGCTCAC+AGG | + | chr7_1:40516360-40516379 | Msa1019220:CDS | 40.0% |
| TCCCTTCATTCACGTAGTTT+CGG | + | chr7_1:40516585-40516604 | Msa1019220:intron | 40.0% | |
| CCATCTGAACAATTGTGTTG+AGG | - | chr7_1:40516870-40516889 | None:intergenic | 40.0% | |
| CCTCAACACAATTGTTCAGA+TGG | + | chr7_1:40516867-40516886 | Msa1019220:CDS | 40.0% | |
| !! | AGTTGATTTGTGCCTGCATT+TGG | - | chr7_1:40517042-40517061 | None:intergenic | 40.0% |
| AGAGAGATCCAGCAAGAACA+AGG | - | chr7_1:40513776-40513795 | None:intergenic | 45.0% | |
| ! | TTGATGTAGTTGTGATGGGG+GGG | - | chr7_1:40513808-40513827 | None:intergenic | 45.0% |
| GGGGATTGATGTAGTTGTGA+TGG | - | chr7_1:40513813-40513832 | None:intergenic | 45.0% | |
| TGGGATATGAGTGGAAAGGA+GGG | - | chr7_1:40513932-40513951 | None:intergenic | 45.0% | |
| TTGGTGGGATATGAGTGGAA+AGG | - | chr7_1:40513936-40513955 | None:intergenic | 45.0% | |
| !! | TGCCATGTAGGCATTGAAGA+TGG | - | chr7_1:40514192-40514211 | None:intergenic | 45.0% |
| GCAGAATTCTCAACTGATCC+TGG | + | chr7_1:40514549-40514568 | Msa1019220:CDS | 45.0% | |
| GCAGAGGAAGAATCAAAAGG+GGG | + | chr7_1:40515098-40515117 | Msa1019220:CDS | 45.0% | |
| GAGCAATTCAAAACCTCCTG+AGG | + | chr7_1:40515160-40515179 | Msa1019220:CDS | 45.0% | |
| !! | ATGTAATCCTTTGGTGCCTC+AGG | - | chr7_1:40515179-40515198 | None:intergenic | 45.0% |
| GGAGGGAGAAAATCAGTGAA+AGG | + | chr7_1:40515518-40515537 | Msa1019220:CDS | 45.0% | |
| CTTCTACAAGATCTTGTCCC+TGG | + | chr7_1:40515547-40515566 | Msa1019220:CDS | 45.0% | |
| TCTTGTCCCTGGTTGCAATA+AGG | + | chr7_1:40515558-40515577 | Msa1019220:CDS | 45.0% | |
| ! | TGCTTTTCCAGTGACCTAGA+AGG | - | chr7_1:40515666-40515685 | None:intergenic | 45.0% |
| ! | ATCATTGCAGCGTCAAGTTG+AGG | + | chr7_1:40515718-40515737 | Msa1019220:CDS | 45.0% |
| ATTGGCCACTGTTAACACCA+AGG | + | chr7_1:40515993-40516012 | Msa1019220:CDS | 45.0% | |
| !! | ATCCACCTTGGTGTTAACAG+TGG | - | chr7_1:40516001-40516020 | None:intergenic | 45.0% |
| ! | GATGGTGCTGAGGAATCTAA+TGG | - | chr7_1:40516202-40516221 | None:intergenic | 45.0% |
| TCCTCAGCACCATCCTATTA+TGG | + | chr7_1:40516208-40516227 | Msa1019220:CDS | 45.0% | |
| CCTCAGCACCATCCTATTAT+GGG | + | chr7_1:40516209-40516228 | Msa1019220:CDS | 45.0% | |
| !! | CTGGTGTTGTTGCCCATAAT+AGG | - | chr7_1:40516224-40516243 | None:intergenic | 45.0% |
| ! | TGTGAATTGCTGGGTTTTGC+TGG | - | chr7_1:40516243-40516262 | None:intergenic | 45.0% |
| ! | TAATGGGTCCACTGAGTTGT+GGG | - | chr7_1:40516290-40516309 | None:intergenic | 45.0% |
| AACTCAGTGGACCCATTAGA+TGG | + | chr7_1:40516292-40516311 | Msa1019220:CDS | 45.0% | |
| GGTGGTTTATGCCAAAACCT+TGG | + | chr7_1:40516313-40516332 | Msa1019220:CDS | 45.0% | |
| GTGAAGATAAGTGCATGCCA+AGG | - | chr7_1:40516333-40516352 | None:intergenic | 45.0% | |
| CCCGAAACTACGTGAATGAA+GGG | - | chr7_1:40516589-40516608 | None:intergenic | 45.0% | |
| CCCTTCATTCACGTAGTTTC+GGG | + | chr7_1:40516586-40516605 | Msa1019220:intron | 45.0% | |
| ACCCGAAACTACGTGAATGA+AGG | - | chr7_1:40516590-40516609 | None:intergenic | 45.0% | |
| GTGGACCGTCTCAAAATAAC+TGG | + | chr7_1:40516683-40516702 | Msa1019220:intron | 45.0% | |
| !!! | TTTTTGTTTATATTATAAAT+TGG | + | chr7_1:40515861-40515880 | Msa1019220:intron | 5.0% |
| AGAGAGAGGGAGAGAGAGAA+GGG | - | chr7_1:40513833-40513852 | None:intergenic | 50.0% | |
| GAGAGAGAGAGAGAGAGAGA+GGG | - | chr7_1:40513846-40513865 | None:intergenic | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | - | chr7_1:40513845-40513864 | None:intergenic | 50.0% | |
| ! | GTGGAAAGGAGGGTGTGAAA+AGG | - | chr7_1:40513922-40513941 | None:intergenic | 50.0% |
| GTGGGATATGAGTGGAAAGG+AGG | - | chr7_1:40513933-40513952 | None:intergenic | 50.0% | |
| GCAGCTCTTTCTGCAAAACC+AGG | - | chr7_1:40514570-40514589 | None:intergenic | 50.0% | |
| ! | AAAACCTCCTGAGGCACCAA+AGG | + | chr7_1:40515169-40515188 | Msa1019220:CDS | 50.0% |
| !! | TAATCCTTTGGTGCCTCAGG+AGG | - | chr7_1:40515176-40515195 | None:intergenic | 50.0% |
| TACGACCGCAATTGCAGTTG+CGG | + | chr7_1:40515412-40515431 | Msa1019220:intron | 50.0% | |
| GTCCCTGGTTGCAATAAGGT+TGG | + | chr7_1:40515562-40515581 | Msa1019220:intron | 50.0% | |
| ! | CCCATAATAGGATGGTGCTG+AGG | - | chr7_1:40516212-40516231 | None:intergenic | 50.0% |
| AACTGTGACCCACAACTCAG+TGG | + | chr7_1:40516279-40516298 | Msa1019220:CDS | 50.0% | |
| ! | CTAATGGGTCCACTGAGTTG+TGG | - | chr7_1:40516291-40516310 | None:intergenic | 50.0% |
| TCAGTGGACCCATTAGATGG+TGG | + | chr7_1:40516295-40516314 | Msa1019220:CDS | 50.0% | |
| GAGAGAGGGAGAGAGAGAAG+GGG | - | chr7_1:40513832-40513851 | None:intergenic | 55.0% | |
| GAGAGAGAGGGAGAGAGAGA+AGG | - | chr7_1:40513834-40513853 | None:intergenic | 55.0% | |
| GTGGTCCGCAACTGCAATTG+CGG | - | chr7_1:40515420-40515439 | None:intergenic | 55.0% | |
| GGCCACTGTTAACACCAAGG+TGG | + | chr7_1:40515996-40516015 | Msa1019220:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 40513768 | 40517548 | 40513768 | ID=Msa1019220;Name=Msa1019220 |
| chr7_1 | mRNA | 40513768 | 40517548 | 40513768 | ID=Msa1019220-mRNA-1;Parent=Msa1019220;Name=Msa1019220-mRNA-1;_AED=0.06;_eAED=0.06;_QI=332|1|1|1|0.87|0.77|9|477|527 |
| chr7_1 | exon | 40513768 | 40513834 | 40513768 | ID=Msa1019220-mRNA-1:exon:7875;Parent=Msa1019220-mRNA-1 |
| chr7_1 | exon | 40513855 | 40514914 | 40513855 | ID=Msa1019220-mRNA-1:exon:7876;Parent=Msa1019220-mRNA-1 |
| chr7_1 | exon | 40515020 | 40515253 | 40515020 | ID=Msa1019220-mRNA-1:exon:7877;Parent=Msa1019220-mRNA-1 |
| chr7_1 | exon | 40515514 | 40515579 | 40515514 | ID=Msa1019220-mRNA-1:exon:7878;Parent=Msa1019220-mRNA-1 |
| chr7_1 | exon | 40515671 | 40515739 | 40515671 | ID=Msa1019220-mRNA-1:exon:7879;Parent=Msa1019220-mRNA-1 |
| chr7_1 | exon | 40515979 | 40516050 | 40515979 | ID=Msa1019220-mRNA-1:exon:7880;Parent=Msa1019220-mRNA-1 |
| chr7_1 | exon | 40516160 | 40516381 | 40516160 | ID=Msa1019220-mRNA-1:exon:7881;Parent=Msa1019220-mRNA-1 |
| chr7_1 | exon | 40516841 | 40516943 | 40516841 | ID=Msa1019220-mRNA-1:exon:7882;Parent=Msa1019220-mRNA-1 |
| chr7_1 | exon | 40517049 | 40517548 | 40517049 | ID=Msa1019220-mRNA-1:exon:7883;Parent=Msa1019220-mRNA-1 |
| chr7_1 | five_prime_UTR | 40513768 | 40513834 | 40513768 | ID=Msa1019220-mRNA-1:five_prime_utr;Parent=Msa1019220-mRNA-1 |
| chr7_1 | five_prime_UTR | 40513855 | 40514119 | 40513855 | ID=Msa1019220-mRNA-1:five_prime_utr;Parent=Msa1019220-mRNA-1 |
| chr7_1 | CDS | 40514120 | 40514914 | 40514120 | ID=Msa1019220-mRNA-1:cds;Parent=Msa1019220-mRNA-1 |
| chr7_1 | CDS | 40515020 | 40515253 | 40515020 | ID=Msa1019220-mRNA-1:cds;Parent=Msa1019220-mRNA-1 |
| chr7_1 | CDS | 40515514 | 40515579 | 40515514 | ID=Msa1019220-mRNA-1:cds;Parent=Msa1019220-mRNA-1 |
| chr7_1 | CDS | 40515671 | 40515739 | 40515671 | ID=Msa1019220-mRNA-1:cds;Parent=Msa1019220-mRNA-1 |
| chr7_1 | CDS | 40515979 | 40516050 | 40515979 | ID=Msa1019220-mRNA-1:cds;Parent=Msa1019220-mRNA-1 |
| chr7_1 | CDS | 40516160 | 40516381 | 40516160 | ID=Msa1019220-mRNA-1:cds;Parent=Msa1019220-mRNA-1 |
| chr7_1 | CDS | 40516841 | 40516943 | 40516841 | ID=Msa1019220-mRNA-1:cds;Parent=Msa1019220-mRNA-1 |
| chr7_1 | CDS | 40517049 | 40517071 | 40517049 | ID=Msa1019220-mRNA-1:cds;Parent=Msa1019220-mRNA-1 |
| chr7_1 | three_prime_UTR | 40517072 | 40517548 | 40517072 | ID=Msa1019220-mRNA-1:three_prime_utr;Parent=Msa1019220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
