Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0617360 | AFK44638.1 | 88.542 | 96 | 8 | 1 | 96 | 188 | 321 | 416 | 1.23e-46 | 168 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0617360 | sp|Q2RAK2|KPYC1_ORYSJ | 96.667 | 30 | 1 | 0 | 32 | 61 | 262 | 291 | 1.63e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0617360 | Msa0670030 | 0.802665 | 5.036633e-49 | -8.615850e-47 |
| Msa0617360 | Msa0680100 | 0.813058 | 3.101620e-51 | -8.615850e-47 |
| Msa0617360 | Msa0712720 | 0.831282 | 1.823957e-55 | -8.615850e-47 |
| Msa0617360 | Msa0900770 | 0.809914 | 1.494772e-50 | -8.615850e-47 |
| Msa0617360 | Msa0927290 | 0.801858 | 7.382240e-49 | -8.615850e-47 |
| Msa0617360 | Msa1012240 | 0.939597 | 9.731188e-100 | -8.615850e-47 |
| Msa0617360 | Msa1012250 | 0.939983 | 5.066374e-100 | -8.615850e-47 |
| Msa0617360 | Msa1012260 | 0.942505 | 6.376792e-102 | -8.615850e-47 |
| Msa0617360 | Msa1179770 | 0.804036 | 2.619075e-49 | -8.615850e-47 |
| Msa0617360 | Msa1296900 | 0.812278 | 4.595028e-51 | -8.615850e-47 |
| Msa0617360 | Msa1356370 | 0.803330 | 3.670019e-49 | -8.615850e-47 |
| Msa0272910 | Msa0617360 | 0.941787 | 2.261778e-101 | -8.615850e-47 |
| Msa0340470 | Msa0617360 | 0.812917 | 3.330870e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0617360 | MtrunA17_Chr3g0138401 | 88.542 | 96 | 8 | 1 | 96 | 188 | 321 | 416 | 1.16e-50 | 168 |
| Msa0617360 | MtrunA17_Chr1g0198231 | 96.774 | 31 | 1 | 0 | 61 | 91 | 291 | 321 | 2.14e-15 | 73.2 |
| Msa0617360 | MtrunA17_Chr8g0367631 | 93.548 | 31 | 2 | 0 | 61 | 91 | 281 | 311 | 1.24e-14 | 70.9 |
| Msa0617360 | MtrunA17_Chr7g0265591 | 100.000 | 30 | 0 | 0 | 32 | 61 | 262 | 291 | 1.61e-13 | 68.2 |
| Msa0617360 | MtrunA17_Chr1g0179541 | 100.000 | 30 | 0 | 0 | 32 | 61 | 246 | 275 | 2.14e-13 | 67.8 |
| Msa0617360 | MtrunA17_Chr2g0278901 | 80.645 | 31 | 6 | 0 | 61 | 91 | 284 | 314 | 2.59e-12 | 64.3 |
| Msa0617360 | MtrunA17_Chr1g0197911 | 90.000 | 30 | 3 | 0 | 32 | 61 | 261 | 290 | 1.13e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0617360 | AT3G52990.2 | 100.000 | 30 | 0 | 0 | 32 | 61 | 209 | 238 | 2.54e-13 | 67.8 |
| Msa0617360 | AT3G52990.1 | 100.000 | 30 | 0 | 0 | 32 | 61 | 262 | 291 | 2.63e-13 | 67.8 |
| Msa0617360 | AT2G36580.1 | 100.000 | 30 | 0 | 0 | 32 | 61 | 262 | 291 | 2.98e-13 | 67.8 |
| Msa0617360 | AT1G80670.1 | 80.645 | 31 | 6 | 0 | 61 | 91 | 282 | 312 | 4.07e-12 | 63.9 |
Find 63 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCTTGTCCCGTGGGAATT+TGG | 0.131046 | 4_2:+67830848 | Msa0617360:CDS |
| TGCTTGAACAGCCAGATTTC+TGG | 0.202017 | 4_2:-67833588 | None:intergenic |
| TCTAAACCGGTCACCTTATC+AGG | 0.216944 | 4_2:+67833895 | Msa0617360:three_prime_UTR |
| CTGTGTCTAGGTGCAGGGTC+TGG | 0.269441 | 4_2:+67830497 | Msa0617360:intron |
| CTTGTAGAATCTCATCAAAA+TGG | 0.282372 | 4_2:-67830812 | None:intergenic |
| CAGAAATAAGAGAAAGCTAT+TGG | 0.288530 | 4_2:-67833695 | None:intergenic |
| ACCAGCTTTGCAGTGGATTT+AGG | 0.291769 | 4_2:-67832914 | None:intergenic |
| ATCTTGTCCCGTGGGAATTT+GGG | 0.295886 | 4_2:+67830849 | Msa0617360:CDS |
| GCATACCGCGTAAGCATATA+TGG | 0.299683 | 4_2:-67832465 | None:intergenic |
| TGCTAAAGATACCAGAAATC+TGG | 0.323635 | 4_2:+67833577 | Msa0617360:CDS |
| GTCTACAGGTTTGTTATGAT+TGG | 0.341574 | 4_2:+67832846 | Msa0617360:intron |
| TTAGCTTATTCCTCTTTGAT+AGG | 0.342074 | 4_2:+67830561 | Msa0617360:CDS |
| CATAGTGGAGAAAATGAAAC+AGG | 0.343306 | 4_2:+67832953 | Msa0617360:CDS |
| TTCTATTGCAGTTTCTAAAC+CGG | 0.384539 | 4_2:+67833882 | Msa0617360:three_prime_UTR |
| TGTGTCTAGGTGCAGGGTCT+GGG | 0.392512 | 4_2:+67830498 | Msa0617360:intron |
| CATGGGAAGTTGTCTGCTAC+TGG | 0.416162 | 4_2:+67833001 | Msa0617360:CDS |
| ATTGAATGTACTGCAGGGTA+TGG | 0.417856 | 4_2:-67832432 | None:intergenic |
| AGAAATAAGAGAAAGCTATT+GGG | 0.419640 | 4_2:-67833694 | None:intergenic |
| ACAAAGAATCTAACCTTCTC+TGG | 0.426853 | 4_2:-67830885 | None:intergenic |
| GCCTAAATCCACTGCAAAGC+TGG | 0.430607 | 4_2:+67832913 | Msa0617360:CDS |
| TCCTGCTGTGTCTAGGTGCA+GGG | 0.434688 | 4_2:+67830492 | Msa0617360:intron |
| AGAAGATGCTTGACCTGATA+AGG | 0.443032 | 4_2:-67833908 | None:intergenic |
| GTCATTATTGAATGTACTGC+AGG | 0.456046 | 4_2:-67832438 | None:intergenic |
| TTAAACATGTTGCCATTTGT+TGG | 0.456841 | 4_2:+67830527 | Msa0617360:CDS |
| GGAGTAGATACACGATCAAC+AGG | 0.468170 | 4_2:-67833046 | None:intergenic |
| TTGTAGAATCTCATCAAAAT+GGG | 0.469141 | 4_2:-67830811 | None:intergenic |
| ACTGCAAAGATGGTGGATCT+TGG | 0.479375 | 4_2:+67832876 | Msa0617360:CDS |
| GTGAGAAAATTTGACAAAAG+AGG | 0.485887 | 4_2:-67833737 | None:intergenic |
| AGTAATCCTCAAGAGCTTCA+TGG | 0.497229 | 4_2:+67832983 | Msa0617360:CDS |
| TTATTCCTCTTTGATAGGAG+TGG | 0.500496 | 4_2:+67830566 | Msa0617360:CDS |
| ATGTTTCTGTAATCAATGGC+AGG | 0.504577 | 4_2:+67829773 | None:intergenic |
| GAGTAGGATGATTGTTAAAG+AGG | 0.509074 | 4_2:+67833805 | Msa0617360:three_prime_UTR |
| AACTTCCCATGAAGCTCTTG+AGG | 0.518605 | 4_2:-67832989 | None:intergenic |
| ATTATGTGGGGAGCAAGAGT+AGG | 0.524042 | 4_2:+67833789 | Msa0617360:three_prime_UTR |
| GGCAGTTCTAGCCGTGCCGT+TGG | 0.525116 | 4_2:+67833022 | Msa0617360:CDS |
| GTAATCCTCAAGAGCTTCAT+GGG | 0.525373 | 4_2:+67832984 | Msa0617360:CDS |
| AATAACAACCTTACGAATGT+TGG | 0.526846 | 4_2:+67833943 | Msa0617360:three_prime_UTR |
| AATGTTGCTTCACCAACAAA+TGG | 0.529121 | 4_2:-67830539 | None:intergenic |
| CATTGATCTTCCACCAGAGA+AGG | 0.538672 | 4_2:+67830872 | Msa0617360:CDS |
| ATCATTGACCAGCTTTGCAG+TGG | 0.539773 | 4_2:-67832921 | None:intergenic |
| TGGAGCAACTACTGCAAAGA+TGG | 0.553115 | 4_2:+67832866 | Msa0617360:CDS |
| TCTACTTACCAACATTCGTA+AGG | 0.553647 | 4_2:-67833951 | None:intergenic |
| GCTTGACCTGATAAGGTGAC+CGG | 0.558454 | 4_2:-67833901 | None:intergenic |
| AATGATAGTAACTTGCATAG+TGG | 0.579416 | 4_2:+67832938 | Msa0617360:CDS |
| GAGATTCTACAAGAAGCTGA+TGG | 0.579505 | 4_2:+67830822 | Msa0617360:CDS |
| CCTCTTTGATAGGAGTGGTG+TGG | 0.581690 | 4_2:+67830571 | Msa0617360:CDS |
| GATCGTGTATCTACTCCAGC+CGG | 0.597972 | 4_2:+67833052 | Msa0617360:CDS |
| TACACGATCAACAGGACCAA+CGG | 0.602833 | 4_2:-67833038 | None:intergenic |
| ATGGAATCATCTTGTCCCGT+GGG | 0.603759 | 4_2:+67830841 | Msa0617360:CDS |
| TAATTGATGTATCTGTTAGA+CGG | 0.604298 | 4_2:-67833829 | None:intergenic |
| TGCAGTACATTCAATAATGA+CGG | 0.604536 | 4_2:+67832440 | Msa0617360:CDS |
| CCACACCACTCCTATCAAAG+AGG | 0.605958 | 4_2:-67830571 | None:intergenic |
| AAGAATCTAACCTTCTCTGG+TGG | 0.606089 | 4_2:-67830882 | None:intergenic |
| ATCAATGCCCAAATTCCCAC+GGG | 0.610460 | 4_2:-67830856 | None:intergenic |
| TGTATTGTAGGGGCACATCA+AGG | 0.610537 | 4_2:+67833545 | Msa0617360:intron |
| TTGAATGTACTGCAGGGTAT+GGG | 0.618328 | 4_2:-67832431 | None:intergenic |
| AGCAACTACTGCAAAGATGG+TGG | 0.619072 | 4_2:+67832869 | Msa0617360:CDS |
| GATCAATGCCCAAATTCCCA+CGG | 0.634784 | 4_2:-67830857 | None:intergenic |
| GATCAACAGGACCAACGGCA+CGG | 0.637608 | 4_2:-67833033 | None:intergenic |
| GATGGAATCATCTTGTCCCG+TGG | 0.645597 | 4_2:+67830840 | Msa0617360:CDS |
| TCATTATTGAATGTACTGCA+GGG | 0.646171 | 4_2:-67832437 | None:intergenic |
| CGGTTCCATATATGCTTACG+CGG | 0.673675 | 4_2:+67832460 | Msa0617360:CDS |
| ATAGTGGAGAAAATGAAACA+GGG | 0.722474 | 4_2:+67832954 | Msa0617360:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAGAAAAAATTTGATTTTTT+TGG | + | chr4_2:67830162-67830181 | Msa0617360:intron | 10.0% |
| !! | TACTTAATAATTCTTAAAAT+GGG | + | chr4_2:67830987-67831006 | Msa0617360:intron | 10.0% |
| !!! | CATAATCTTTTTTTTTTTTA+AGG | - | chr4_2:67833775-67833794 | None:intergenic | 10.0% |
| !! | TAAAAAAAAAAAAGATTATG+TGG | + | chr4_2:67833775-67833794 | Msa0617360:three_prime_UTR | 10.0% |
| !! | AAAAAAAAAAAAGATTATGT+GGG | + | chr4_2:67833776-67833795 | Msa0617360:three_prime_UTR | 10.0% |
| !!! | AAATTTGATTTTTTTGGATT+TGG | + | chr4_2:67830168-67830187 | Msa0617360:intron | 15.0% |
| !!! | TTTATATATCTGTTCTTTTT+AGG | + | chr4_2:67830782-67830801 | Msa0617360:intron | 15.0% |
| !!! | TTATATATCTGTTCTTTTTA+GGG | + | chr4_2:67830783-67830802 | Msa0617360:intron | 15.0% |
| !! | GTACTTAATAATTCTTAAAA+TGG | + | chr4_2:67830986-67831005 | Msa0617360:intron | 15.0% |
| !! | ACTTAATAATTCTTAAAATG+GGG | + | chr4_2:67830988-67831007 | Msa0617360:intron | 15.0% |
| !!! | ATATTTTTGTTTGTTTTATG+AGG | + | chr4_2:67831018-67831037 | Msa0617360:intron | 15.0% |
| !!! | TTAATCTCAAATTTTTTCTT+TGG | + | chr4_2:67831125-67831144 | Msa0617360:intron | 15.0% |
| !!! | TATCTAATCTAAGAATTTTT+AGG | + | chr4_2:67831997-67832016 | Msa0617360:intron | 15.0% |
| !! | TTCTAAATTCATTAGAATAT+TGG | + | chr4_2:67833357-67833376 | Msa0617360:intron | 15.0% |
| !! | AATCAATAAAATATTAGAGT+TGG | - | chr4_2:67833413-67833432 | None:intergenic | 15.0% |
| !!! | TTTTTATGTTCATATTCAAT+GGG | + | chr4_2:67833668-67833687 | Msa0617360:three_prime_UTR | 15.0% |
| !! | AAAAAAAAAAAGATTATGTG+GGG | + | chr4_2:67833777-67833796 | Msa0617360:three_prime_UTR | 15.0% |
| !!! | AGAATGAATATAACAATTTT+TGG | + | chr4_2:67833990-67834009 | Msa0617360:three_prime_UTR | 15.0% |
| !! | TAGGAAAGATTGAATAAAAT+TGG | - | chr4_2:67831068-67831087 | None:intergenic | 20.0% |
| !! | AGATAAGGAAAATAAATCTT+AGG | - | chr4_2:67831462-67831481 | None:intergenic | 20.0% |
| !! | AAGGCAAATAAATAAATCTT+AGG | - | chr4_2:67831630-67831649 | None:intergenic | 20.0% |
| !! | AAGATTTATTTATTTGCCTT+TGG | + | chr4_2:67831630-67831649 | Msa0617360:intron | 20.0% |
| !! | AAACCTTAACATAGTAATTA+TGG | - | chr4_2:67831670-67831689 | None:intergenic | 20.0% |
| !!! | TTACTATGTTAAGGTTTTAT+TGG | + | chr4_2:67831673-67831692 | Msa0617360:intron | 20.0% |
| !!! | TTTTATATACATGATCATCA+TGG | + | chr4_2:67831699-67831718 | Msa0617360:intron | 20.0% |
| !! | ATTTCTCTTCATTATTCATT+AGG | - | chr4_2:67831964-67831983 | None:intergenic | 20.0% |
| !! | AATAACAGACAAAACTTTAT+CGG | - | chr4_2:67832129-67832148 | None:intergenic | 20.0% |
| !! | ATCCTTTCAATATAAGATAT+GGG | + | chr4_2:67832239-67832258 | Msa0617360:intron | 20.0% |
| !! | TTAATAGTGTACAGTAATTA+CGG | - | chr4_2:67832294-67832313 | None:intergenic | 20.0% |
| !!! | TATTTTCTAGATTTGATACA+TGG | - | chr4_2:67832317-67832336 | None:intergenic | 20.0% |
| !! | ACATAGAAAGTAAATAACTA+CGG | - | chr4_2:67832512-67832531 | None:intergenic | 20.0% |
| !!! | ATAATTTGCTTGCTATTTTA+TGG | + | chr4_2:67832759-67832778 | Msa0617360:intron | 20.0% |
| !! | AATTTCCCTTAATATGATAT+CGG | + | chr4_2:67833204-67833223 | Msa0617360:intron | 20.0% |
| !! | TCTAATGAATTTAGAAAGAA+AGG | - | chr4_2:67833353-67833372 | None:intergenic | 20.0% |
| !!! | ATAAAATATTAGAGTTGGTA+CGG | - | chr4_2:67833408-67833427 | None:intergenic | 20.0% |
| !!! | GTTTTTATGTTCATATTCAA+TGG | + | chr4_2:67833667-67833686 | Msa0617360:three_prime_UTR | 20.0% |
| !!! | ACAATTTTTGGTTTAAAAAG+AGG | + | chr4_2:67834002-67834021 | Msa0617360:three_prime_UTR | 20.0% |
| !! | ATGACTCAAATTTTCTGATA+TGG | + | chr4_2:67829798-67829817 | Msa0617360:intron | 25.0% |
| !!! | TCTTCTTTTAGGCTTTAATT+TGG | + | chr4_2:67830027-67830046 | Msa0617360:intron | 25.0% |
| !! | ATTTAGTGTTATGCTCTAAA+TGG | + | chr4_2:67830077-67830096 | Msa0617360:intron | 25.0% |
| !! | TTTAGTGTTATGCTCTAAAT+GGG | + | chr4_2:67830078-67830097 | Msa0617360:intron | 25.0% |
| ! | AAAAACAGGAAAATAAATGC+AGG | - | chr4_2:67830197-67830216 | None:intergenic | 25.0% |
| !!! | TGTTTTTTTATCGTTTTTGC+TGG | + | chr4_2:67830462-67830481 | Msa0617360:intron | 25.0% |
| !!! | GTTTTTTTATCGTTTTTGCT+GGG | + | chr4_2:67830463-67830482 | Msa0617360:intron | 25.0% |
| ! | TCATGTTATATAGTGTTGTA+GGG | + | chr4_2:67830628-67830647 | Msa0617360:intron | 25.0% |
| ! | GACACTTATAATTCTACATT+AGG | + | chr4_2:67830650-67830669 | Msa0617360:intron | 25.0% |
| !! | ATCTAAGATTGAAAAGATTG+AGG | + | chr4_2:67830675-67830694 | Msa0617360:intron | 25.0% |
| ! | TTGTAGAATCTCATCAAAAT+GGG | - | chr4_2:67830814-67830833 | None:intergenic | 25.0% |
| ! | ATAATTCTTAAAATGGGGTT+TGG | + | chr4_2:67830993-67831012 | Msa0617360:intron | 25.0% |
| ! | ATATTGAGACCATACTTTAT+TGG | + | chr4_2:67831587-67831606 | Msa0617360:intron | 25.0% |
| ! | ACATAGTAATTATGGACATT+TGG | - | chr4_2:67831662-67831681 | None:intergenic | 25.0% |
| ! | TGTCCATAATTACTATGTTA+AGG | + | chr4_2:67831664-67831683 | Msa0617360:intron | 25.0% |
| !! | TCACTCTTTTACAGTATAAA+GGG | - | chr4_2:67831803-67831822 | None:intergenic | 25.0% |
| !! | TTCACTCTTTTACAGTATAA+AGG | - | chr4_2:67831804-67831823 | None:intergenic | 25.0% |
| !! | TACACCTAATTTTTATTCCT+GGG | + | chr4_2:67832023-67832042 | Msa0617360:intron | 25.0% |
| ! | TCACTTCATAGTAAAATTGA+AGG | + | chr4_2:67832213-67832232 | Msa0617360:intron | 25.0% |
| ! | GATCCTTTCAATATAAGATA+TGG | + | chr4_2:67832238-67832257 | Msa0617360:intron | 25.0% |
| !!! | ATTTTTTGTAGAATATGCAG+AGG | + | chr4_2:67832399-67832418 | Msa0617360:intron | 25.0% |
| !!! | TTTGTTTCTAGCTTTATAGT+TGG | + | chr4_2:67832548-67832567 | Msa0617360:intron | 25.0% |
| ! | AATTATGGTAACTGAATTGA+AGG | - | chr4_2:67832800-67832819 | None:intergenic | 25.0% |
| ! | GTATTATAATACCTCCAAAT+TGG | + | chr4_2:67833127-67833146 | Msa0617360:intron | 25.0% |
| !! | TGATTGTTCAAAGCTAATTT+TGG | - | chr4_2:67833250-67833269 | None:intergenic | 25.0% |
| !!! | TAAAATATTAGAGTTGGTAC+GGG | - | chr4_2:67833407-67833426 | None:intergenic | 25.0% |
| !! | AGAAGACAAGAATTTTCATA+TGG | - | chr4_2:67833452-67833471 | None:intergenic | 25.0% |
| ! | TGAAAATTCTTGTCTTCTTT+AGG | + | chr4_2:67833454-67833473 | Msa0617360:intron | 25.0% |
| ! | TAAATATCCGATTGTATTGT+AGG | + | chr4_2:67833533-67833552 | Msa0617360:intron | 25.0% |
| ! | AAATATCCGATTGTATTGTA+GGG | + | chr4_2:67833534-67833553 | Msa0617360:intron | 25.0% |
| ! | AGAAATAAGAGAAAGCTATT+GGG | - | chr4_2:67833697-67833716 | None:intergenic | 25.0% |
| ! | TAATTGATGTATCTGTTAGA+CGG | - | chr4_2:67833832-67833851 | None:intergenic | 25.0% |
| !!! | GCAATAGAAGATGTTTTTTA+CGG | - | chr4_2:67833871-67833890 | None:intergenic | 25.0% |
| ! | TTCAATTAGATAGAGTGCTT+TGG | + | chr4_2:67829853-67829872 | Msa0617360:intron | 30.0% |
| ATGTAACTGAAACCTTGATT+CGG | + | chr4_2:67829922-67829941 | Msa0617360:intron | 30.0% | |
| ! | ATGCTTCAAAGGCTTTAATT+TGG | + | chr4_2:67829967-67829986 | Msa0617360:intron | 30.0% |
| ! | TGCTTCAAAGGCTTTAATTT+GGG | + | chr4_2:67829968-67829987 | Msa0617360:intron | 30.0% |
| !! | CAAGTTGAGTTTCTTCTTTT+AGG | + | chr4_2:67830016-67830035 | Msa0617360:intron | 30.0% |
| !! | AGGCTTTAATTTGGTTGTAT+AGG | + | chr4_2:67830036-67830055 | Msa0617360:intron | 30.0% |
| GAATTGTTGTCTATGAACTT+GGG | + | chr4_2:67830100-67830119 | Msa0617360:intron | 30.0% | |
| TCTGCAATCACATAAAAAAC+AGG | - | chr4_2:67830211-67830230 | None:intergenic | 30.0% | |
| TGAGAGAAATGAAACAATGA+TGG | + | chr4_2:67830255-67830274 | Msa0617360:intron | 30.0% | |
| GAGAGAAATGAAACAATGAT+GGG | + | chr4_2:67830256-67830275 | Msa0617360:intron | 30.0% | |
| ! | TTAAACATGTTGCCATTTGT+TGG | + | chr4_2:67830527-67830546 | Msa0617360:CDS | 30.0% |
| TTAGCTTATTCCTCTTTGAT+AGG | + | chr4_2:67830561-67830580 | Msa0617360:CDS | 30.0% | |
| GTCATGTTATATAGTGTTGT+AGG | + | chr4_2:67830627-67830646 | Msa0617360:intron | 30.0% | |
| TGCATTTCTTCATTGTGTAT+TGG | + | chr4_2:67830703-67830722 | Msa0617360:intron | 30.0% | |
| CTTGTAGAATCTCATCAAAA+TGG | - | chr4_2:67830815-67830834 | None:intergenic | 30.0% | |
| !! | ATTCTGTTTTGTTGTGCTTT+AGG | + | chr4_2:67830949-67830968 | Msa0617360:intron | 30.0% |
| TACCATCATATGATAACTTG+AGG | + | chr4_2:67831221-67831240 | Msa0617360:intron | 30.0% | |
| GTTCTTATTGTATGACAATG+AGG | + | chr4_2:67831287-67831306 | Msa0617360:intron | 30.0% | |
| TAACATTATGTGATGACTTG+AGG | + | chr4_2:67831317-67831336 | Msa0617360:intron | 30.0% | |
| ! | ATATTGAGACCATACTCTTT+TGG | + | chr4_2:67831420-67831439 | Msa0617360:intron | 30.0% |
| TGATATGTACCAAAAGAGTA+TGG | - | chr4_2:67831432-67831451 | None:intergenic | 30.0% | |
| TCATATGATGGTAACAGATA+AGG | - | chr4_2:67831477-67831496 | None:intergenic | 30.0% | |
| AGTCTCAAGTTATCATATGA+TGG | - | chr4_2:67831489-67831508 | None:intergenic | 30.0% | |
| GCAAACTAATATGATAAGTG+AGG | - | chr4_2:67831354-67831373 | None:intergenic | 30.0% | |
| TGATATGTGCCAATAAAGTA+TGG | - | chr4_2:67831599-67831618 | None:intergenic | 30.0% | |
| ! | GTACACCTAATTTTTATTCC+TGG | + | chr4_2:67832022-67832041 | Msa0617360:intron | 30.0% |
| CAATCCCAGGAATAAAAATT+AGG | - | chr4_2:67832030-67832049 | None:intergenic | 30.0% | |
| CACCCATATCTTATATTGAA+AGG | - | chr4_2:67832244-67832263 | None:intergenic | 30.0% | |
| CTTTCAATATAAGATATGGG+TGG | + | chr4_2:67832242-67832261 | Msa0617360:intron | 30.0% | |
| TTTAAGAACCTAGACAGAAA+TGG | - | chr4_2:67832270-67832289 | None:intergenic | 30.0% | |
| ACTAACTTCAGAAAGAGAAA+AGG | - | chr4_2:67832357-67832376 | None:intergenic | 30.0% | |
| TCATTATTGAATGTACTGCA+GGG | - | chr4_2:67832440-67832459 | None:intergenic | 30.0% | |
| TGCAGTACATTCAATAATGA+CGG | + | chr4_2:67832440-67832459 | Msa0617360:CDS | 30.0% | |
| ATTAGATATTTGAGCCTTGA+GGG | + | chr4_2:67832684-67832703 | Msa0617360:intron | 30.0% | |
| ! | GTTGTTTCAGAGTCAAATTA+TGG | - | chr4_2:67832815-67832834 | None:intergenic | 30.0% |
| ! | AATGATAGTAACTTGCATAG+TGG | + | chr4_2:67832938-67832957 | Msa0617360:CDS | 30.0% |
| ! | ATAGTGGAGAAAATGAAACA+GGG | + | chr4_2:67832954-67832973 | Msa0617360:CDS | 30.0% |
| TCTTTCAATCACTACCAATT+TGG | - | chr4_2:67833144-67833163 | None:intergenic | 30.0% | |
| GTTGTCCGATATCATATTAA+GGG | - | chr4_2:67833212-67833231 | None:intergenic | 30.0% | |
| AGTTGTCCGATATCATATTA+AGG | - | chr4_2:67833213-67833232 | None:intergenic | 30.0% | |
| AATATCCGATTGTATTGTAG+GGG | + | chr4_2:67833535-67833554 | Msa0617360:intron | 30.0% | |
| CAGAAATAAGAGAAAGCTAT+TGG | - | chr4_2:67833698-67833717 | None:intergenic | 30.0% | |
| GTGAGAAAATTTGACAAAAG+AGG | - | chr4_2:67833740-67833759 | None:intergenic | 30.0% | |
| TTCTATTGCAGTTTCTAAAC+CGG | + | chr4_2:67833882-67833901 | Msa0617360:three_prime_UTR | 30.0% | |
| AATAACAACCTTACGAATGT+TGG | + | chr4_2:67833943-67833962 | Msa0617360:three_prime_UTR | 30.0% | |
| ATATGCCAATCTCTGATGAA+AGG | + | chr4_2:67829830-67829849 | Msa0617360:intron | 35.0% | |
| TTGAACCTTTCATCAGAGAT+TGG | - | chr4_2:67829838-67829857 | None:intergenic | 35.0% | |
| ! | AATTAGATAGAGTGCTTTGG+TGG | + | chr4_2:67829856-67829875 | Msa0617360:intron | 35.0% |
| ! | ATTAGATAGAGTGCTTTGGT+GGG | + | chr4_2:67829857-67829876 | Msa0617360:intron | 35.0% |
| TTCTTGCAGAATGTTCATCA+AGG | + | chr4_2:67829897-67829916 | Msa0617360:intron | 35.0% | |
| GGAATTGTTGTCTATGAACT+TGG | + | chr4_2:67830099-67830118 | Msa0617360:intron | 35.0% | |
| TGTGATTGCAGATGCTAAAA+AGG | + | chr4_2:67830219-67830238 | Msa0617360:intron | 35.0% | |
| GGATGAACTAATGAATGAAG+AGG | + | chr4_2:67830277-67830296 | Msa0617360:intron | 35.0% | |
| TGAACTAATGAATGAAGAGG+AGG | + | chr4_2:67830280-67830299 | Msa0617360:intron | 35.0% | |
| ! | GTCCTTTTTCTTCATTTTGC+TGG | + | chr4_2:67830391-67830410 | Msa0617360:intron | 35.0% |
| GACCAGCAAAATGAAGAAAA+AGG | - | chr4_2:67830396-67830415 | None:intergenic | 35.0% | |
| ! | TTTTCTTCATTTTGCTGGTC+TGG | + | chr4_2:67830396-67830415 | Msa0617360:intron | 35.0% |
| ! | AATGTTGCTTCACCAACAAA+TGG | - | chr4_2:67830542-67830561 | None:intergenic | 35.0% |
| TTATTCCTCTTTGATAGGAG+TGG | + | chr4_2:67830566-67830585 | Msa0617360:CDS | 35.0% | |
| TTGAATCAGCATAGCTGATA+AGG | - | chr4_2:67830757-67830776 | None:intergenic | 35.0% | |
| ACAAAGAATCTAACCTTCTC+TGG | - | chr4_2:67830888-67830907 | None:intergenic | 35.0% | |
| GTTCTTATTGTCTGACAATG+AGG | + | chr4_2:67831191-67831210 | Msa0617360:intron | 35.0% | |
| AGCCTCAAGTTATCATATGA+TGG | - | chr4_2:67831226-67831245 | None:intergenic | 35.0% | |
| TTGAGGCTCTATTGAATATC+TGG | + | chr4_2:67831238-67831257 | Msa0617360:intron | 35.0% | |
| TCATGGTTAGCATTCAATGA+AGG | + | chr4_2:67831716-67831735 | Msa0617360:intron | 35.0% | |
| ACAAAACTTTATCGGATCCT+AGG | - | chr4_2:67832121-67832140 | None:intergenic | 35.0% | |
| GTCATTATTGAATGTACTGC+AGG | - | chr4_2:67832441-67832460 | None:intergenic | 35.0% | |
| AAACCCTTCATACTTATCGA+TGG | + | chr4_2:67832588-67832607 | Msa0617360:intron | 35.0% | |
| GCTCAAATATCTAATCCAAG+TGG | - | chr4_2:67832679-67832698 | None:intergenic | 35.0% | |
| GATTAGATATTTGAGCCTTG+AGG | + | chr4_2:67832683-67832702 | Msa0617360:intron | 35.0% | |
| AATTGACAGTTTAACCCTCA+AGG | - | chr4_2:67832701-67832720 | None:intergenic | 35.0% | |
| ! | AATTGAAGGCACATATCAAC+AGG | - | chr4_2:67832786-67832805 | None:intergenic | 35.0% |
| ! | AACTTTTACACATCGTCTAC+AGG | + | chr4_2:67832832-67832851 | Msa0617360:intron | 35.0% |
| !! | GTCTACAGGTTTGTTATGAT+TGG | + | chr4_2:67832846-67832865 | Msa0617360:intron | 35.0% |
| ! | CATAGTGGAGAAAATGAAAC+AGG | + | chr4_2:67832953-67832972 | Msa0617360:CDS | 35.0% |
| GCATACTGCATAGTTTGATT+TGG | + | chr4_2:67833085-67833104 | Msa0617360:intron | 35.0% | |
| TTCAATCACTACCAATTTGG+AGG | - | chr4_2:67833141-67833160 | None:intergenic | 35.0% | |
| ! | TGGTAGTGATTGAAAGACTA+CGG | + | chr4_2:67833147-67833166 | Msa0617360:intron | 35.0% |
| TTAAGGGAAATTACTACTGC+AGG | - | chr4_2:67833196-67833215 | None:intergenic | 35.0% | |
| AAGAAAAGGATGACACGAAA+AGG | - | chr4_2:67833319-67833338 | None:intergenic | 35.0% | |
| ! | CATCCTTTTCTTTACCTTAC+TGG | + | chr4_2:67833327-67833346 | Msa0617360:intron | 35.0% |
| TTTAGAAAGAAAGGCCAGTA+AGG | - | chr4_2:67833344-67833363 | None:intergenic | 35.0% | |
| TGCTAAAGATACCAGAAATC+TGG | + | chr4_2:67833577-67833596 | Msa0617360:CDS | 35.0% | |
| ! | GTTCTTTTGTCTTCAGAACT+GGG | - | chr4_2:67833620-67833639 | None:intergenic | 35.0% |
| GAGTAGGATGATTGTTAAAG+AGG | + | chr4_2:67833805-67833824 | Msa0617360:three_prime_UTR | 35.0% | |
| TCTACTTACCAACATTCGTA+AGG | - | chr4_2:67833954-67833973 | None:intergenic | 35.0% | |
| TGCTTTCAGAAACCGAATCA+AGG | - | chr4_2:67829937-67829956 | None:intergenic | 40.0% | |
| !! | TGATTCGGTTTCTGAAAGCA+AGG | + | chr4_2:67829937-67829956 | Msa0617360:intron | 40.0% |
| ! | GATTCGGTTTCTGAAAGCAA+GGG | + | chr4_2:67829938-67829957 | Msa0617360:intron | 40.0% |
| AAGGGAATGGAATGCTTCAA+AGG | + | chr4_2:67829956-67829975 | Msa0617360:intron | 40.0% | |
| GCAGATGCTAAAAAGGATGA+AGG | + | chr4_2:67830226-67830245 | Msa0617360:intron | 40.0% | |
| AGTAGAAGAACAGCAAGAAG+AGG | + | chr4_2:67830307-67830326 | Msa0617360:intron | 40.0% | |
| !!! | CATTTTGCTGGTCTGGTTTT+TGG | + | chr4_2:67830403-67830422 | Msa0617360:intron | 40.0% |
| !! | GTGGTTACTAGCTTTCTTTG+TGG | + | chr4_2:67830427-67830446 | Msa0617360:intron | 40.0% |
| !!! | GTTTTTTTCCTGCTGTGTCT+AGG | + | chr4_2:67830485-67830504 | Msa0617360:intron | 40.0% |
| GAGATTCTACAAGAAGCTGA+TGG | + | chr4_2:67830822-67830841 | Msa0617360:CDS | 40.0% | |
| AAGAATCTAACCTTCTCTGG+TGG | - | chr4_2:67830885-67830904 | None:intergenic | 40.0% | |
| GGTCTCAATATTTGCTTGCA+AGG | - | chr4_2:67831411-67831430 | None:intergenic | 40.0% | |
| GGACATTTGGTTACTTCCAA+AGG | - | chr4_2:67831649-67831668 | None:intergenic | 40.0% | |
| TGAGCTCTTGTATTCTTCAC+CGG | - | chr4_2:67831872-67831891 | None:intergenic | 40.0% | |
| TCCTGGGATTGTAGTTCAAT+CGG | + | chr4_2:67832039-67832058 | Msa0617360:intron | 40.0% | |
| AACTTTATCGGATCCTAGGT+CGG | - | chr4_2:67832117-67832136 | None:intergenic | 40.0% | |
| CAGTGAAAAATACGGGCAAA+AGG | - | chr4_2:67832155-67832174 | None:intergenic | 40.0% | |
| ! | TTTGCCCGTATTTTTCACTG+TGG | + | chr4_2:67832155-67832174 | Msa0617360:intron | 40.0% |
| ! | TTGCCCGTATTTTTCACTGT+GGG | + | chr4_2:67832156-67832175 | Msa0617360:intron | 40.0% |
| GTTAGAGACAAGTTTCCTCA+CGG | - | chr4_2:67832183-67832202 | None:intergenic | 40.0% | |
| TTGAATGTACTGCAGGGTAT+GGG | - | chr4_2:67832434-67832453 | None:intergenic | 40.0% | |
| ATTGAATGTACTGCAGGGTA+TGG | - | chr4_2:67832435-67832454 | None:intergenic | 40.0% | |
| GGTCCATCGATAAGTATGAA+GGG | - | chr4_2:67832594-67832613 | None:intergenic | 40.0% | |
| AGGTCCATCGATAAGTATGA+AGG | - | chr4_2:67832595-67832614 | None:intergenic | 40.0% | |
| ! | CATGATGTTTCTGCGAAATG+AGG | - | chr4_2:67832615-67832634 | None:intergenic | 40.0% |
| TATCTAATCCAAGTGGCAGA+TGG | - | chr4_2:67832672-67832691 | None:intergenic | 40.0% | |
| AGTAATCCTCAAGAGCTTCA+TGG | + | chr4_2:67832983-67833002 | Msa0617360:CDS | 40.0% | |
| GTAATCCTCAAGAGCTTCAT+GGG | + | chr4_2:67832984-67833003 | Msa0617360:CDS | 40.0% | |
| CAAACTATGCAGTATGCTTG+AGG | - | chr4_2:67833082-67833101 | None:intergenic | 40.0% | |
| !! | TACTGCAGGCGATATTTTTG+GGG | - | chr4_2:67833182-67833201 | None:intergenic | 40.0% |
| ! | CTACTGCAGGCGATATTTTT+GGG | - | chr4_2:67833183-67833202 | None:intergenic | 40.0% |
| ! | ACTACTGCAGGCGATATTTT+TGG | - | chr4_2:67833184-67833203 | None:intergenic | 40.0% |
| ! | ACGAAAAGGATCAGTGGATT+TGG | - | chr4_2:67833305-67833324 | None:intergenic | 40.0% |
| AGGCCAGTAAGGTAAAGAAA+AGG | - | chr4_2:67833333-67833352 | None:intergenic | 40.0% | |
| ATGTGCCCCTACAATACAAT+CGG | - | chr4_2:67833543-67833562 | None:intergenic | 40.0% | |
| ! | CGTTCTTTTGTCTTCAGAAC+TGG | - | chr4_2:67833621-67833640 | None:intergenic | 40.0% |
| AGAAGATGCTTGACCTGATA+AGG | - | chr4_2:67833911-67833930 | None:intergenic | 40.0% | |
| ! | GGTTTCTGAAAGCAAGGGAA+TGG | + | chr4_2:67829943-67829962 | Msa0617360:intron | 45.0% |
| ACACCAAAACTCAGCAACAC+AGG | - | chr4_2:67830373-67830392 | None:intergenic | 45.0% | |
| TAGGAGTGGTGTGGTATCAT+AGG | + | chr4_2:67830580-67830599 | Msa0617360:intron | 45.0% | |
| ATGGAATCATCTTGTCCCGT+GGG | + | chr4_2:67830841-67830860 | Msa0617360:CDS | 45.0% | |
| ATCTTGTCCCGTGGGAATTT+GGG | + | chr4_2:67830849-67830868 | Msa0617360:CDS | 45.0% | |
| ATCAATGCCCAAATTCCCAC+GGG | - | chr4_2:67830859-67830878 | None:intergenic | 45.0% | |
| GATCAATGCCCAAATTCCCA+CGG | - | chr4_2:67830860-67830879 | None:intergenic | 45.0% | |
| CATTGATCTTCCACCAGAGA+AGG | + | chr4_2:67830872-67830891 | Msa0617360:CDS | 45.0% | |
| TGCACTGTGACTGTTAATCC+CGG | + | chr4_2:67831850-67831869 | Msa0617360:intron | 45.0% | |
| GAGCTCTTGTATTCTTCACC+GGG | - | chr4_2:67831871-67831890 | None:intergenic | 45.0% | |
| ACCGATTGAACTACAATCCC+AGG | - | chr4_2:67832043-67832062 | None:intergenic | 45.0% | |
| ACTTTATCGGATCCTAGGTC+GGG | - | chr4_2:67832116-67832135 | None:intergenic | 45.0% | |
| ! | TGCCCGTATTTTTCACTGTG+GGG | + | chr4_2:67832157-67832176 | Msa0617360:intron | 45.0% |
| CGGTTCCATATATGCTTACG+CGG | + | chr4_2:67832460-67832479 | Msa0617360:CDS | 45.0% | |
| GCATACCGCGTAAGCATATA+TGG | - | chr4_2:67832468-67832487 | None:intergenic | 45.0% | |
| TGGAGCAACTACTGCAAAGA+TGG | + | chr4_2:67832866-67832885 | Msa0617360:CDS | 45.0% | |
| AGCAACTACTGCAAAGATGG+TGG | + | chr4_2:67832869-67832888 | Msa0617360:CDS | 45.0% | |
| !! | ACTGCAAAGATGGTGGATCT+TGG | + | chr4_2:67832876-67832895 | Msa0617360:CDS | 45.0% |
| ! | ACCAGCTTTGCAGTGGATTT+AGG | - | chr4_2:67832917-67832936 | None:intergenic | 45.0% |
| ATCATTGACCAGCTTTGCAG+TGG | - | chr4_2:67832924-67832943 | None:intergenic | 45.0% | |
| AACTTCCCATGAAGCTCTTG+AGG | - | chr4_2:67832992-67833011 | None:intergenic | 45.0% | |
| TACACGATCAACAGGACCAA+CGG | - | chr4_2:67833041-67833060 | None:intergenic | 45.0% | |
| GGAGTAGATACACGATCAAC+AGG | - | chr4_2:67833049-67833068 | None:intergenic | 45.0% | |
| GCAGTATGCTTGAGGATTAC+CGG | - | chr4_2:67833074-67833093 | None:intergenic | 45.0% | |
| GATGACACGAAAAGGATCAG+TGG | - | chr4_2:67833311-67833330 | None:intergenic | 45.0% | |
| !! | TATTAGAGTTGGTACGGGCA+AGG | - | chr4_2:67833402-67833421 | None:intergenic | 45.0% |
| ! | TGTATTGTAGGGGCACATCA+AGG | + | chr4_2:67833545-67833564 | Msa0617360:intron | 45.0% |
| TGCTTGAACAGCCAGATTTC+TGG | - | chr4_2:67833591-67833610 | None:intergenic | 45.0% | |
| ATTATGTGGGGAGCAAGAGT+AGG | + | chr4_2:67833789-67833808 | Msa0617360:three_prime_UTR | 45.0% | |
| TCTAAACCGGTCACCTTATC+AGG | + | chr4_2:67833895-67833914 | Msa0617360:three_prime_UTR | 45.0% | |
| !!! | AAAAAAAATATCTTTAAAAT+AGG | - | chr4_2:67831087-67831106 | None:intergenic | 5.0% |
| !! | CAGCCTGTGTTGCTGAGTTT+TGG | + | chr4_2:67830367-67830386 | Msa0617360:intron | 50.0% |
| !!! | TGCTGGTCTGGTTTTTGGTG+TGG | + | chr4_2:67830408-67830427 | Msa0617360:intron | 50.0% |
| CCACACCACTCCTATCAAAG+AGG | - | chr4_2:67830574-67830593 | None:intergenic | 50.0% | |
| CCTCTTTGATAGGAGTGGTG+TGG | + | chr4_2:67830571-67830590 | Msa0617360:CDS | 50.0% | |
| GATGGAATCATCTTGTCCCG+TGG | + | chr4_2:67830840-67830859 | Msa0617360:CDS | 50.0% | |
| CATCTTGTCCCGTGGGAATT+TGG | + | chr4_2:67830848-67830867 | Msa0617360:CDS | 50.0% | |
| GGCCCCACAGTGAAAAATAC+GGG | - | chr4_2:67832162-67832181 | None:intergenic | 50.0% | |
| CGGCCCCACAGTGAAAAATA+CGG | - | chr4_2:67832163-67832182 | None:intergenic | 50.0% | |
| GGGTGGTTCCATTTCTGTCT+AGG | + | chr4_2:67832259-67832278 | Msa0617360:intron | 50.0% | |
| GCTTAGATCCATCTGCCACT+TGG | + | chr4_2:67832661-67832680 | Msa0617360:intron | 50.0% | |
| GCCTAAATCCACTGCAAAGC+TGG | + | chr4_2:67832913-67832932 | Msa0617360:CDS | 50.0% | |
| CATGGGAAGTTGTCTGCTAC+TGG | + | chr4_2:67833001-67833020 | Msa0617360:CDS | 50.0% | |
| GATCGTGTATCTACTCCAGC+CGG | + | chr4_2:67833052-67833071 | Msa0617360:CDS | 50.0% | |
| TATGCTTGAGGATTACCGGC+TGG | - | chr4_2:67833070-67833089 | None:intergenic | 50.0% | |
| TTGGTACGGGCAAGGTCTAA+AGG | - | chr4_2:67833394-67833413 | None:intergenic | 50.0% | |
| GCTTGACCTGATAAGGTGAC+CGG | - | chr4_2:67833904-67833923 | None:intergenic | 50.0% | |
| TTCCTGCTGTGTCTAGGTGC+AGG | + | chr4_2:67830491-67830510 | Msa0617360:intron | 55.0% | |
| TCCTGCTGTGTCTAGGTGCA+GGG | + | chr4_2:67830492-67830511 | Msa0617360:intron | 55.0% | |
| TGTGTCTAGGTGCAGGGTCT+GGG | + | chr4_2:67830498-67830517 | Msa0617360:intron | 55.0% | |
| ! | TTTTTCACTGTGGGGCCGTG+AGG | + | chr4_2:67832165-67832184 | Msa0617360:intron | 55.0% |
| GATCAACAGGACCAACGGCA+CGG | - | chr4_2:67833036-67833055 | None:intergenic | 55.0% | |
| ACCCTGCACCTAGACACAGC+AGG | - | chr4_2:67830496-67830515 | None:intergenic | 60.0% | |
| CTGTGTCTAGGTGCAGGGTC+TGG | + | chr4_2:67830497-67830516 | Msa0617360:intron | 60.0% | |
| ATCCTAGGTCGGGACTGACG+GGG | - | chr4_2:67832106-67832125 | None:intergenic | 60.0% | |
| GATCCTAGGTCGGGACTGAC+GGG | - | chr4_2:67832107-67832126 | None:intergenic | 60.0% | |
| GGATCCTAGGTCGGGACTGA+CGG | - | chr4_2:67832108-67832127 | None:intergenic | 60.0% | |
| !! | GTCAGAGCACCGCCCTGTCA+TGG | + | chr4_2:67832061-67832080 | Msa0617360:intron | 65.0% |
| !! | AGAGCACCGCCCTGTCATGG+CGG | + | chr4_2:67832064-67832083 | Msa0617360:intron | 65.0% |
| CAGCTTCCGCCATGACAGGG+CGG | - | chr4_2:67832073-67832092 | None:intergenic | 65.0% | |
| CCGCAGCTTCCGCCATGACA+GGG | - | chr4_2:67832076-67832095 | None:intergenic | 65.0% | |
| ! | CCCTGTCATGGCGGAAGCTG+CGG | + | chr4_2:67832073-67832092 | Msa0617360:intron | 65.0% |
| ! | CCTGTCATGGCGGAAGCTGC+GGG | + | chr4_2:67832074-67832093 | Msa0617360:intron | 65.0% |
| ! | GGCAGTTCTAGCCGTGCCGT+TGG | + | chr4_2:67833022-67833041 | Msa0617360:CDS | 65.0% |
| CCCGCAGCTTCCGCCATGAC+AGG | - | chr4_2:67832077-67832096 | None:intergenic | 70.0% | |
| AGCCCCGTCAGTCCCGACCT+AGG | + | chr4_2:67832101-67832120 | Msa0617360:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 67829788 | 67834032 | 67829788 | ID=Msa0617360;Name=Msa0617360 |
| chr4_2 | mRNA | 67829788 | 67834032 | 67829788 | ID=Msa0617360-mRNA-1;Parent=Msa0617360;Name=Msa0617360-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0.2|0.16|0.33|1|1|6|386|188 |
| chr4_2 | exon | 67829788 | 67829794 | 67829788 | ID=Msa0617360-mRNA-1:exon:19428;Parent=Msa0617360-mRNA-1 |
| chr4_2 | exon | 67830507 | 67830592 | 67830507 | ID=Msa0617360-mRNA-1:exon:19429;Parent=Msa0617360-mRNA-1 |
| chr4_2 | exon | 67830804 | 67830893 | 67830804 | ID=Msa0617360-mRNA-1:exon:19430;Parent=Msa0617360-mRNA-1 |
| chr4_2 | exon | 67832410 | 67832481 | 67832410 | ID=Msa0617360-mRNA-1:exon:19431;Parent=Msa0617360-mRNA-1 |
| chr4_2 | exon | 67832854 | 67833073 | 67832854 | ID=Msa0617360-mRNA-1:exon:19432;Parent=Msa0617360-mRNA-1 |
| chr4_2 | exon | 67833555 | 67834032 | 67833555 | ID=Msa0617360-mRNA-1:exon:19433;Parent=Msa0617360-mRNA-1 |
| chr4_2 | CDS | 67829788 | 67829794 | 67829788 | ID=Msa0617360-mRNA-1:cds;Parent=Msa0617360-mRNA-1 |
| chr4_2 | CDS | 67830507 | 67830592 | 67830507 | ID=Msa0617360-mRNA-1:cds;Parent=Msa0617360-mRNA-1 |
| chr4_2 | CDS | 67830804 | 67830893 | 67830804 | ID=Msa0617360-mRNA-1:cds;Parent=Msa0617360-mRNA-1 |
| chr4_2 | CDS | 67832410 | 67832481 | 67832410 | ID=Msa0617360-mRNA-1:cds;Parent=Msa0617360-mRNA-1 |
| chr4_2 | CDS | 67832854 | 67833073 | 67832854 | ID=Msa0617360-mRNA-1:cds;Parent=Msa0617360-mRNA-1 |
| chr4_2 | CDS | 67833555 | 67833646 | 67833555 | ID=Msa0617360-mRNA-1:cds;Parent=Msa0617360-mRNA-1 |
| chr4_2 | three_prime_UTR | 67833647 | 67834032 | 67833647 | ID=Msa0617360-mRNA-1:three_prime_utr;Parent=Msa0617360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
