Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1179770 | XP_039683306.1 | 77.778 | 171 | 13 | 2 | 62 | 232 | 247 | 392 | 7.94e-60 | 206 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1179770 | sp|Q8S9J0|TAUE4_ARATH | 54.971 | 171 | 52 | 2 | 62 | 232 | 241 | 386 | 9.07e-38 | 140 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011170 | Msa1179770 | 0.808260 | 3.379250e-50 | -8.615850e-47 |
| Msa0015400 | Msa1179770 | 0.803238 | 3.834563e-49 | -8.615850e-47 |
| Msa0017070 | Msa1179770 | 0.805520 | 1.283155e-49 | -8.615850e-47 |
| Msa0039330 | Msa1179770 | 0.829993 | 3.772042e-55 | -8.615850e-47 |
| Msa0065500 | Msa1179770 | 0.806788 | 6.939080e-50 | -8.615850e-47 |
| Msa0107580 | Msa1179770 | 0.802603 | 5.186980e-49 | -8.615850e-47 |
| Msa0606960 | Msa1179770 | 0.803770 | 2.974904e-49 | -8.615850e-47 |
| Msa0607540 | Msa1179770 | 0.810111 | 1.355844e-50 | -8.615850e-47 |
| Msa0610430 | Msa1179770 | 0.822062 | 2.895418e-53 | -8.615850e-47 |
| Msa0613060 | Msa1179770 | 0.805756 | 1.144482e-49 | -8.615850e-47 |
| Msa0617360 | Msa1179770 | 0.804036 | 2.619075e-49 | -8.615850e-47 |
| Msa0626090 | Msa1179770 | 0.827428 | 1.573065e-54 | -8.615850e-47 |
| Msa0638930 | Msa1179770 | -0.812434 | 4.247771e-51 | -8.615850e-47 |
| Msa0647830 | Msa1179770 | 0.805119 | 1.557173e-49 | -8.615850e-47 |
| Msa0657970 | Msa1179770 | 0.804346 | 2.257877e-49 | -8.615850e-47 |
| Msa0668260 | Msa1179770 | 0.804317 | 2.289699e-49 | -8.615850e-47 |
| Msa0673460 | Msa1179770 | 0.820771 | 5.750183e-53 | -8.615850e-47 |
| Msa0680100 | Msa1179770 | 0.816610 | 5.061282e-52 | -8.615850e-47 |
| Msa0690440 | Msa1179770 | 0.814397 | 1.573020e-51 | -8.615850e-47 |
| Msa0693380 | Msa1179770 | 0.800221 | 1.595596e-48 | -8.615850e-47 |
| Msa0735170 | Msa1179770 | 0.812871 | 3.409056e-51 | -8.615850e-47 |
| Msa0744170 | Msa1179770 | -0.806301 | 8.791314e-50 | -8.615850e-47 |
| Msa0753720 | Msa1179770 | 0.800026 | 1.748467e-48 | -8.615850e-47 |
| Msa0762360 | Msa1179770 | 0.811920 | 5.498746e-51 | -8.615850e-47 |
| Msa0766630 | Msa1179770 | 0.842125 | 3.129598e-58 | -8.615850e-47 |
| Msa0773540 | Msa1179770 | 0.800127 | 1.667014e-48 | -8.615850e-47 |
| Msa0777790 | Msa1179770 | 0.801281 | 9.695473e-49 | -8.615850e-47 |
| Msa0777850 | Msa1179770 | 0.800015 | 1.757074e-48 | -8.615850e-47 |
| Msa0806090 | Msa1179770 | 0.801922 | 7.162021e-49 | -8.615850e-47 |
| Msa0807030 | Msa1179770 | 0.800230 | 1.588740e-48 | -8.615850e-47 |
| Msa0810220 | Msa1179770 | 0.801236 | 9.901411e-49 | -8.615850e-47 |
| Msa0811080 | Msa1179770 | 0.809695 | 1.665920e-50 | -8.615850e-47 |
| Msa0820840 | Msa1179770 | 0.818032 | 2.422258e-52 | -8.615850e-47 |
| Msa0820850 | Msa1179770 | 0.823743 | 1.175254e-53 | -8.615850e-47 |
| Msa0131770 | Msa1179770 | 0.821611 | 3.682912e-53 | -8.615850e-47 |
| Msa0142220 | Msa1179770 | 0.810373 | 1.190526e-50 | -8.615850e-47 |
| Msa0178930 | Msa1179770 | 0.818672 | 1.734787e-52 | -8.615850e-47 |
| Msa0210450 | Msa1179770 | 0.803094 | 4.107022e-49 | -8.615850e-47 |
| Msa0223010 | Msa1179770 | 0.806883 | 6.625537e-50 | -8.615850e-47 |
| Msa0233080 | Msa1179770 | 0.801736 | 7.820386e-49 | -8.615850e-47 |
| Msa0233300 | Msa1179770 | 0.821685 | 3.540570e-53 | -8.615850e-47 |
| Msa0376590 | Msa1179770 | 0.809271 | 2.054457e-50 | -8.615850e-47 |
| Msa0389320 | Msa1179770 | 0.811991 | 5.306430e-51 | -8.615850e-47 |
| Msa0397750 | Msa1179770 | 0.815853 | 7.471619e-52 | -8.615850e-47 |
| Msa0466390 | Msa1179770 | 0.812655 | 3.800210e-51 | -8.615850e-47 |
| Msa0983090 | Msa1179770 | 0.803692 | 3.087530e-49 | -8.615850e-47 |
| Msa0997370 | Msa1179770 | 0.802381 | 5.764572e-49 | -8.615850e-47 |
| Msa1003620 | Msa1179770 | 0.817350 | 3.451962e-52 | -8.615850e-47 |
| Msa1009560 | Msa1179770 | 0.806412 | 8.329399e-50 | -8.615850e-47 |
| Msa1014540 | Msa1179770 | 0.825206 | 5.318031e-54 | -8.615850e-47 |
| Msa1030970 | Msa1179770 | 0.819889 | 9.162571e-53 | -8.615850e-47 |
| Msa1059570 | Msa1179770 | 0.810372 | 1.191102e-50 | -8.615850e-47 |
| Msa1075220 | Msa1179770 | -0.824493 | 7.832791e-54 | -8.615850e-47 |
| Msa1075540 | Msa1179770 | 0.808802 | 2.588925e-50 | -8.615850e-47 |
| Msa1082500 | Msa1179770 | 0.818482 | 1.915430e-52 | -8.615850e-47 |
| Msa0251320 | Msa1179770 | 0.815382 | 9.515937e-52 | -8.615850e-47 |
| Msa0273100 | Msa1179770 | 0.830813 | 2.376608e-55 | -8.615850e-47 |
| Msa0281030 | Msa1179770 | 0.801656 | 8.124213e-49 | -8.615850e-47 |
| Msa0319170 | Msa1179770 | 0.811538 | 6.659656e-51 | -8.615850e-47 |
| Msa0320120 | Msa1179770 | 0.841104 | 5.815932e-58 | -8.615850e-47 |
| Msa0339620 | Msa1179770 | 0.811948 | 5.423384e-51 | -8.615850e-47 |
| Msa0340470 | Msa1179770 | 0.812808 | 3.518681e-51 | -8.615850e-47 |
| Msa0354800 | Msa1179770 | -0.821480 | 3.948622e-53 | -8.615850e-47 |
| Msa1121490 | Msa1179770 | 0.813155 | 2.953902e-51 | -8.615850e-47 |
| Msa1136090 | Msa1179770 | 0.800308 | 1.531851e-48 | -8.615850e-47 |
| Msa1139000 | Msa1179770 | -0.800353 | 1.499913e-48 | -8.615850e-47 |
| Msa1162550 | Msa1179770 | -0.817611 | 3.013780e-52 | -8.615850e-47 |
| Msa1171610 | Msa1179770 | 0.809486 | 1.848249e-50 | -8.615850e-47 |
| Msa1173470 | Msa1179770 | 0.801314 | 9.545194e-49 | -8.615850e-47 |
| Msa1179770 | Msa1188370 | 0.816271 | 6.027792e-52 | -8.615850e-47 |
| Msa1179770 | Msa1192990 | 0.822737 | 2.018054e-53 | -8.615850e-47 |
| Msa1179770 | Msa1239720 | 0.803406 | 3.538801e-49 | -8.615850e-47 |
| Msa1179770 | Msa1250890 | 0.800836 | 1.195679e-48 | -8.615850e-47 |
| Msa1179770 | Msa1277660 | 0.808942 | 2.417307e-50 | -8.615850e-47 |
| Msa1179770 | Msa1284680 | 0.839679 | 1.371696e-57 | -8.615850e-47 |
| Msa1179770 | Msa1288550 | 0.819489 | 1.130689e-52 | -8.615850e-47 |
| Msa1179770 | Msa1322890 | 0.817051 | 4.029329e-52 | -8.615850e-47 |
| Msa1179770 | Msa1342840 | 0.800343 | 1.506922e-48 | -8.615850e-47 |
| Msa1179770 | Msa1356370 | 0.830521 | 2.802766e-55 | -8.615850e-47 |
| Msa1179770 | Msa1359040 | 0.821048 | 4.965545e-53 | -8.615850e-47 |
| Msa1179770 | Msa1372760 | 0.802240 | 6.162706e-49 | -8.615850e-47 |
| Msa1179770 | Msa1373030 | 0.808858 | 2.519069e-50 | -8.615850e-47 |
| Msa1179770 | Msa1384330 | 0.811817 | 5.791624e-51 | -8.615850e-47 |
| Msa1179770 | Msa1388930 | 0.808846 | 2.533448e-50 | -8.615850e-47 |
| Msa1179770 | Msa1427230 | 0.817190 | 3.749100e-52 | -8.615850e-47 |
| Msa1179770 | Msa1451620 | -0.817849 | 2.663292e-52 | -8.615850e-47 |
| Msa1179770 | Msa1460830 | 0.810875 | 9.272779e-51 | -8.615850e-47 |
| Msa1179770 | Msa1466540 | 0.805779 | 1.132074e-49 | -8.615850e-47 |
| Msa0484780 | Msa1179770 | 0.809292 | 2.033685e-50 | -8.615850e-47 |
| Msa0512900 | Msa1179770 | 0.803874 | 2.829916e-49 | -8.615850e-47 |
| Msa0520410 | Msa1179770 | 0.811577 | 6.531784e-51 | -8.615850e-47 |
| Msa0532350 | Msa1179770 | 0.808206 | 3.470011e-50 | -8.615850e-47 |
| Msa0536220 | Msa1179770 | 0.821573 | 3.757637e-53 | -8.615850e-47 |
| Msa0541130 | Msa1179770 | 0.807303 | 5.400275e-50 | -8.615850e-47 |
| Msa0545210 | Msa1179770 | 0.811484 | 6.843352e-51 | -8.615850e-47 |
| Msa0545700 | Msa1179770 | 0.803797 | 2.936082e-49 | -8.615850e-47 |
| Msa0553460 | Msa1179770 | 0.803169 | 3.962832e-49 | -8.615850e-47 |
| Msa0554050 | Msa1179770 | 0.800178 | 1.628142e-48 | -8.615850e-47 |
| Msa0555720 | Msa1179770 | 0.805280 | 1.440607e-49 | -8.615850e-47 |
| Msa0558690 | Msa1179770 | 0.819078 | 1.402836e-52 | -8.615850e-47 |
| Msa0564390 | Msa1179770 | 0.802179 | 6.342793e-49 | -8.615850e-47 |
| Msa0564510 | Msa1179770 | 0.808795 | 2.598023e-50 | -8.615850e-47 |
| Msa0589780 | Msa1179770 | 0.814065 | 1.862511e-51 | -8.615850e-47 |
| Msa0842650 | Msa1179770 | 0.817542 | 3.124011e-52 | -8.615850e-47 |
| Msa0861120 | Msa1179770 | 0.811013 | 8.657690e-51 | -8.615850e-47 |
| Msa0861130 | Msa1179770 | 0.823515 | 1.328730e-53 | -8.615850e-47 |
| Msa0901500 | Msa1179770 | 0.848153 | 7.347686e-60 | -8.615850e-47 |
| Msa0907070 | Msa1179770 | 0.814212 | 1.728685e-51 | -8.615850e-47 |
| Msa0925290 | Msa1179770 | 0.825502 | 4.526134e-54 | -8.615850e-47 |
| Msa0927290 | Msa1179770 | 0.827836 | 1.255764e-54 | -8.615850e-47 |
| Msa0927380 | Msa1179770 | 0.818503 | 1.895111e-52 | -8.615850e-47 |
| Msa0935910 | Msa1179770 | 0.801146 | 1.033322e-48 | -8.615850e-47 |
| Msa0942200 | Msa1179770 | 0.809917 | 1.492837e-50 | -8.615850e-47 |
| Msa0947180 | Msa1179770 | 0.801130 | 1.041003e-48 | -8.615850e-47 |
| Msa0954130 | Msa1179770 | 0.809023 | 2.322615e-50 | -8.615850e-47 |
| Msa0964900 | Msa1179770 | 0.801241 | 9.879461e-49 | -8.615850e-47 |
| Msa0969520 | Msa1179770 | 0.824877 | 6.360734e-54 | -8.615850e-47 |
| Msa0975220 | Msa1179770 | 0.812856 | 3.434510e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1179770 | MtrunA17_Chr1g0179621 | 77.778 | 171 | 13 | 2 | 62 | 232 | 247 | 392 | 7.30e-64 | 206 |
| Msa1179770 | MtrunA17_Chr7g0265481 | 60.819 | 171 | 42 | 2 | 62 | 232 | 244 | 389 | 2.32e-46 | 160 |
| Msa1179770 | MtrunA17_Chr7g0255561 | 85.000 | 60 | 9 | 0 | 7 | 66 | 210 | 269 | 4.10e-27 | 107 |
| Msa1179770 | MtrunA17_Chr7g0255581 | 85.000 | 60 | 9 | 0 | 7 | 66 | 210 | 269 | 4.10e-27 | 107 |
| Msa1179770 | MtrunA17_Chr3g0139541 | 40.120 | 167 | 68 | 3 | 67 | 232 | 261 | 396 | 1.17e-19 | 87.4 |
| Msa1179770 | MtrunA17_Chr8g0373471 | 40.936 | 171 | 69 | 3 | 63 | 233 | 258 | 396 | 3.29e-18 | 83.2 |
| Msa1179770 | MtrunA17_Chr8g0380191 | 39.053 | 169 | 72 | 2 | 63 | 231 | 111 | 248 | 2.92e-13 | 68.2 |
| Msa1179770 | MtrunA17_Chr8g0380211 | 41.420 | 169 | 68 | 3 | 63 | 231 | 267 | 404 | 3.90e-13 | 68.2 |
| Msa1179770 | MtrunA17_Chr8g0354121 | 63.265 | 49 | 18 | 0 | 18 | 66 | 221 | 269 | 7.34e-13 | 67.4 |
| Msa1179770 | MtrunA17_Chr3g0139621 | 51.648 | 91 | 35 | 2 | 145 | 232 | 60 | 144 | 3.55e-12 | 62.4 |
| Msa1179770 | MtrunA17_Chr1g0160181 | 44.595 | 74 | 40 | 1 | 7 | 79 | 212 | 285 | 4.18e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1179770 | AT2G36630.1 | 54.971 | 171 | 52 | 2 | 62 | 232 | 241 | 386 | 9.22e-39 | 140 |
| Msa1179770 | AT2G25737.1 | 40.588 | 170 | 70 | 2 | 63 | 232 | 264 | 402 | 3.35e-23 | 97.8 |
| Msa1179770 | AT2G40900.1 | 56.667 | 60 | 26 | 0 | 7 | 66 | 197 | 256 | 1.93e-16 | 78.2 |
| Msa1179770 | AT5G07050.1 | 57.377 | 61 | 25 | 1 | 7 | 66 | 216 | 276 | 2.30e-16 | 77.8 |
| Msa1179770 | AT3G56620.1 | 55.000 | 60 | 27 | 0 | 7 | 66 | 198 | 257 | 1.13e-14 | 72.8 |
| Msa1179770 | AT2G25737.2 | 44.248 | 113 | 57 | 1 | 63 | 175 | 264 | 370 | 3.70e-14 | 71.2 |
| Msa1179770 | AT2G37460.1 | 43.243 | 74 | 41 | 1 | 7 | 79 | 204 | 277 | 3.52e-12 | 65.5 |
Find 47 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTGGAGGTGGATTTATTT+TGG | 0.132041 | 8_1:-13347861 | Msa1179770:CDS |
| CAACCAATGCTCCAAGAATT+TGG | 0.233333 | 8_1:+13348747 | None:intergenic |
| ATGCCTCACATATGTATTCT+AGG | 0.262467 | 8_1:+13347963 | None:intergenic |
| GTTGGAGGCTTACTTGGTTC+TGG | 0.271593 | 8_1:-13347878 | Msa1179770:CDS |
| TTGGGTGCTCTTCGGCTTGC+AGG | 0.288226 | 8_1:-13348249 | Msa1179770:intron |
| CCTTGATGATTTGAATTAAG+AGG | 0.306448 | 8_1:+13348389 | None:intergenic |
| GGGCCTCTTCTCCTTGAGAT+AGG | 0.312567 | 8_1:-13347839 | Msa1179770:CDS |
| GGCTTACTTGGTTCTGGAGG+TGG | 0.346407 | 8_1:-13347872 | Msa1179770:CDS |
| GAATAAAACAATCACAATTC+AGG | 0.358193 | 8_1:-13348960 | Msa1179770:intron |
| GGAATTGTTGGAGGCTTACT+TGG | 0.374041 | 8_1:-13347884 | Msa1179770:CDS |
| TGGAGCATAAGCCAAATTCT+TGG | 0.382951 | 8_1:-13348758 | Msa1179770:CDS |
| GAATGCAGGTTGTGACATTA+AGG | 0.406818 | 8_1:-13348860 | Msa1179770:intron |
| CAAATTCTTGGAGCATTGGT+TGG | 0.444305 | 8_1:-13348746 | Msa1179770:CDS |
| GTATGGTATTGGGTGCTCTT+CGG | 0.446576 | 8_1:-13348257 | Msa1179770:CDS |
| CCTCTTAATTCAAATCATCA+AGG | 0.458016 | 8_1:-13348389 | Msa1179770:intron |
| AGGACTGCAGTGTATGGTAT+TGG | 0.459813 | 8_1:-13348268 | Msa1179770:CDS |
| CACAGCCATAGTGTGTTCCT+TGG | 0.460675 | 8_1:-13348814 | Msa1179770:CDS |
| AAGCCAAATTCTTGGAGCAT+TGG | 0.466153 | 8_1:-13348750 | Msa1179770:CDS |
| TGTGCCCAAGGAACACACTA+TGG | 0.466969 | 8_1:+13348809 | None:intergenic |
| AAATTCTTGGAGCATTGGTT+GGG | 0.475126 | 8_1:-13348745 | Msa1179770:CDS |
| CACAGAATGAGGATGGGCAC+AGG | 0.484366 | 8_1:-13347989 | Msa1179770:CDS |
| GAAGATTACCGTAAGGCATA+AGG | 0.487440 | 8_1:+13347224 | None:intergenic |
| GGTATTGTAGGTGGAATTGT+TGG | 0.495520 | 8_1:-13347896 | Msa1179770:CDS |
| AAGAGGTTCCTTATGCCTTA+CGG | 0.497508 | 8_1:-13347232 | Msa1179770:CDS |
| ACAGCCATAGTGTGTTCCTT+GGG | 0.511265 | 8_1:-13348813 | Msa1179770:CDS |
| GGACTGCAGTGTATGGTATT+GGG | 0.513027 | 8_1:-13348267 | Msa1179770:CDS |
| ATTGTAGGTGGAATTGTTGG+AGG | 0.521718 | 8_1:-13347893 | Msa1179770:CDS |
| TGTGCAATGAGTGGTATTGT+AGG | 0.526059 | 8_1:-13347908 | Msa1179770:CDS |
| CAAGGATCACAGAATGAGGA+TGG | 0.532808 | 8_1:-13347996 | Msa1179770:CDS |
| TATGTGAGGCATCAATAGAA+TGG | 0.532905 | 8_1:-13347952 | Msa1179770:CDS |
| TGAGATAGGTGTCATCCCTC+AGG | 0.534173 | 8_1:-13347825 | Msa1179770:intron |
| TTGAATTCTACATTCTCAAG+AGG | 0.545752 | 8_1:-13347249 | Msa1179770:CDS |
| GGAGGCTTACTTGGTTCTGG+AGG | 0.552125 | 8_1:-13347875 | Msa1179770:CDS |
| ATGTAGAGGACTGCAGTGTA+TGG | 0.579413 | 8_1:-13348274 | Msa1179770:CDS |
| TGCACAAGGATCACAGAATG+AGG | 0.583639 | 8_1:-13348000 | Msa1179770:CDS |
| AATTGATTGAAGTGTGCCCA+AGG | 0.589839 | 8_1:+13348797 | None:intergenic |
| ACACCTATCTCAAGGAGAAG+AGG | 0.611353 | 8_1:+13347836 | None:intergenic |
| TGAAGCATTCAAGTTGCACA+AGG | 0.622882 | 8_1:-13348014 | Msa1179770:CDS |
| ACAGAATGAGGATGGGCACA+GGG | 0.625351 | 8_1:-13347988 | Msa1179770:CDS |
| GAGGGATGACACCTATCTCA+AGG | 0.628407 | 8_1:+13347828 | None:intergenic |
| AGTTGATGAAGATTACCGTA+AGG | 0.628726 | 8_1:+13347217 | None:intergenic |
| TGGTTTGCAGACTGATGTAG+AGG | 0.630937 | 8_1:-13348288 | Msa1179770:intron |
| AAGGATCACAGAATGAGGAT+GGG | 0.655632 | 8_1:-13347995 | Msa1179770:CDS |
| AGGGGAGAGACTTACAGCAT+AGG | 0.660913 | 8_1:+13348701 | None:intergenic |
| GCAATGAGTGGTATTGTAGG+TGG | 0.666887 | 8_1:-13347905 | Msa1179770:CDS |
| CTTGCATCTTGTGCAATGAG+TGG | 0.680313 | 8_1:-13347917 | Msa1179770:CDS |
| GAGCCTAGAATACATATGTG+AGG | 0.685813 | 8_1:-13347966 | Msa1179770:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATACATTATTTGAATAT+TGG | - | chr8_1:13347270-13347289 | Msa1179770:CDS | 10.0% |
| !!! | ATTTATAGAGTTTTAAAAAA+AGG | + | chr8_1:13348049-13348068 | None:intergenic | 10.0% |
| !! | ATTATACATTATTTGAATAT+TGG | - | chr8_1:13347270-13347289 | Msa1179770:CDS | 10.0% |
| !!! | ATTTATAGAGTTTTAAAAAA+AGG | + | chr8_1:13348049-13348068 | None:intergenic | 10.0% |
| !! | TGTTTATAAAATTAAGAAAG+TGG | - | chr8_1:13347233-13347252 | Msa1179770:CDS | 15.0% |
| !! | AAATTAAAACTTTCATAACA+GGG | + | chr8_1:13347487-13347506 | None:intergenic | 15.0% |
| !! | TAAAATAAACAGTTTATTGT+TGG | - | chr8_1:13347858-13347877 | Msa1179770:CDS | 15.0% |
| !! | TGTTTATAAAATTAAGAAAG+TGG | - | chr8_1:13347233-13347252 | Msa1179770:CDS | 15.0% |
| !! | AAATTAAAACTTTCATAACA+GGG | + | chr8_1:13347487-13347506 | None:intergenic | 15.0% |
| !! | TAAAATAAACAGTTTATTGT+TGG | - | chr8_1:13347858-13347877 | Msa1179770:CDS | 15.0% |
| !! | AATTAAAACTTTCATAACAG+GGG | + | chr8_1:13347486-13347505 | None:intergenic | 20.0% |
| !! | CAAATTAAAACTTTCATAAC+AGG | + | chr8_1:13347488-13347507 | None:intergenic | 20.0% |
| !!! | GTTATGAAAGTTTTAATTTG+CGG | - | chr8_1:13347488-13347507 | Msa1179770:CDS | 20.0% |
| !! | ATGGTGATAATTTAAATTGT+CGG | - | chr8_1:13348840-13348859 | Msa1179770:CDS | 20.0% |
| !! | AATTAAAACTTTCATAACAG+GGG | + | chr8_1:13347486-13347505 | None:intergenic | 20.0% |
| !! | CAAATTAAAACTTTCATAAC+AGG | + | chr8_1:13347488-13347507 | None:intergenic | 20.0% |
| !!! | GTTATGAAAGTTTTAATTTG+CGG | - | chr8_1:13347488-13347507 | Msa1179770:CDS | 20.0% |
| !! | ATGGTGATAATTTAAATTGT+CGG | - | chr8_1:13348840-13348859 | Msa1179770:CDS | 20.0% |
| ! | GAATAAAACAATCACAATTC+AGG | - | chr8_1:13347206-13347225 | Msa1179770:CDS | 25.0% |
| !! | TAGTCATCTTAAGATTTTTG+TGG | - | chr8_1:13347550-13347569 | Msa1179770:intron | 25.0% |
| !! | TTGTTGTTGAGATTTAAGAA+TGG | - | chr8_1:13347604-13347623 | Msa1179770:intron | 25.0% |
| ! | TTGTTAAGCACAATTGAAAA+GGG | + | chr8_1:13348380-13348399 | None:intergenic | 25.0% |
| ! | ATTGTTAAGCACAATTGAAA+AGG | + | chr8_1:13348381-13348400 | None:intergenic | 25.0% |
| ! | TGATTTAGTGTGTAGTTTAA+TGG | + | chr8_1:13348445-13348464 | None:intergenic | 25.0% |
| ! | AGAAACTTGACTTAAAACTA+TGG | - | chr8_1:13348821-13348840 | Msa1179770:CDS | 25.0% |
| ! | GAATAAAACAATCACAATTC+AGG | - | chr8_1:13347206-13347225 | Msa1179770:CDS | 25.0% |
| !! | TAGTCATCTTAAGATTTTTG+TGG | - | chr8_1:13347550-13347569 | Msa1179770:intron | 25.0% |
| !! | TTGTTGTTGAGATTTAAGAA+TGG | - | chr8_1:13347604-13347623 | Msa1179770:intron | 25.0% |
| ! | TTGTTAAGCACAATTGAAAA+GGG | + | chr8_1:13348380-13348399 | None:intergenic | 25.0% |
| ! | ATTGTTAAGCACAATTGAAA+AGG | + | chr8_1:13348381-13348400 | None:intergenic | 25.0% |
| ! | TGATTTAGTGTGTAGTTTAA+TGG | + | chr8_1:13348445-13348464 | None:intergenic | 25.0% |
| ! | AGAAACTTGACTTAAAACTA+TGG | - | chr8_1:13348821-13348840 | Msa1179770:CDS | 25.0% |
| ! | AATTGCTGTGACTTTTGTTA+TGG | - | chr8_1:13347388-13347407 | Msa1179770:intron | 30.0% |
| ! | ATCTTAAGATTTTTGTGGCT+GGG | - | chr8_1:13347555-13347574 | Msa1179770:intron | 30.0% |
| CTTTGTGTACAAATGTTTGT+TGG | - | chr8_1:13347638-13347657 | Msa1179770:intron | 30.0% | |
| ! | TAATATTCCCTTTTCTCAGT+TGG | - | chr8_1:13347729-13347748 | Msa1179770:intron | 30.0% |
| ! | CCTTGATGATTTGAATTAAG+AGG | + | chr8_1:13347780-13347799 | None:intergenic | 30.0% |
| CCTCTTAATTCAAATCATCA+AGG | - | chr8_1:13347777-13347796 | Msa1179770:intron | 30.0% | |
| ACTGCGATTCATAATATGTT+TGG | + | chr8_1:13347964-13347983 | None:intergenic | 30.0% | |
| CATATTATGAATCGCAGTAA+TGG | - | chr8_1:13347966-13347985 | Msa1179770:CDS | 30.0% | |
| ACAAAAAATGGACATGTGTA+TGG | + | chr8_1:13348098-13348117 | None:intergenic | 30.0% | |
| TTGGAAGCTGAAACAAAAAA+TGG | + | chr8_1:13348110-13348129 | None:intergenic | 30.0% | |
| TCTGGTCAACACAATTAAAA+CGG | + | chr8_1:13348613-13348632 | None:intergenic | 30.0% | |
| TTGAATTCTACATTCTCAAG+AGG | - | chr8_1:13348917-13348936 | Msa1179770:intron | 30.0% | |
| ! | AATTGCTGTGACTTTTGTTA+TGG | - | chr8_1:13347388-13347407 | Msa1179770:intron | 30.0% |
| ! | ATCTTAAGATTTTTGTGGCT+GGG | - | chr8_1:13347555-13347574 | Msa1179770:intron | 30.0% |
| CTTTGTGTACAAATGTTTGT+TGG | - | chr8_1:13347638-13347657 | Msa1179770:intron | 30.0% | |
| ! | TAATATTCCCTTTTCTCAGT+TGG | - | chr8_1:13347729-13347748 | Msa1179770:intron | 30.0% |
| ! | CCTTGATGATTTGAATTAAG+AGG | + | chr8_1:13347780-13347799 | None:intergenic | 30.0% |
| CCTCTTAATTCAAATCATCA+AGG | - | chr8_1:13347777-13347796 | Msa1179770:intron | 30.0% | |
| ACTGCGATTCATAATATGTT+TGG | + | chr8_1:13347964-13347983 | None:intergenic | 30.0% | |
| CATATTATGAATCGCAGTAA+TGG | - | chr8_1:13347966-13347985 | Msa1179770:CDS | 30.0% | |
| ACAAAAAATGGACATGTGTA+TGG | + | chr8_1:13348098-13348117 | None:intergenic | 30.0% | |
| TTGGAAGCTGAAACAAAAAA+TGG | + | chr8_1:13348110-13348129 | None:intergenic | 30.0% | |
| TCTGGTCAACACAATTAAAA+CGG | + | chr8_1:13348613-13348632 | None:intergenic | 30.0% | |
| TTGAATTCTACATTCTCAAG+AGG | - | chr8_1:13348917-13348936 | Msa1179770:intron | 30.0% | |
| !! | AAATTCTTGGAGCATTGGTT+GGG | - | chr8_1:13347421-13347440 | Msa1179770:intron | 35.0% |
| ! | CATCTTAAGATTTTTGTGGC+TGG | - | chr8_1:13347554-13347573 | Msa1179770:intron | 35.0% |
| !! | AAAAGCACCAACTGAGAAAA+GGG | + | chr8_1:13347739-13347758 | None:intergenic | 35.0% |
| TCAAGAATCATGATGAGACT+GGG | + | chr8_1:13348001-13348020 | None:intergenic | 35.0% | |
| ATCAAGAATCATGATGAGAC+TGG | + | chr8_1:13348002-13348021 | None:intergenic | 35.0% | |
| CTTGATATTGCAAAGAATCG+CGG | - | chr8_1:13348016-13348035 | Msa1179770:CDS | 35.0% | |
| ! | TCAGCTTCCAATTGCATTTT+TGG | - | chr8_1:13348119-13348138 | Msa1179770:intron | 35.0% |
| CCAAACACCAAAAATGCAAT+TGG | + | chr8_1:13348129-13348148 | None:intergenic | 35.0% | |
| !!! | CCAATTGCATTTTTGGTGTT+TGG | - | chr8_1:13348126-13348145 | Msa1179770:intron | 35.0% |
| ATGCCTCACATATGTATTCT+AGG | + | chr8_1:13348206-13348225 | None:intergenic | 35.0% | |
| ! | TATGTGAGGCATCAATAGAA+TGG | - | chr8_1:13348214-13348233 | Msa1179770:intron | 35.0% |
| !! | TTCTGGAGGTGGATTTATTT+TGG | - | chr8_1:13348305-13348324 | Msa1179770:intron | 35.0% |
| !! | TCTGGAGGTGGATTTATTTT+GGG | - | chr8_1:13348306-13348325 | Msa1179770:intron | 35.0% |
| TGCTTAACAATGTTGTTGAG+CGG | - | chr8_1:13348390-13348409 | Msa1179770:CDS | 35.0% | |
| CATTAGCGGTTATAGTGTAA+CGG | + | chr8_1:13348541-13348560 | None:intergenic | 35.0% | |
| CGCATATCATTGAACATTAG+CGG | + | chr8_1:13348555-13348574 | None:intergenic | 35.0% | |
| CAATTCGCAATTGAAAACTC+TGG | + | chr8_1:13348631-13348650 | None:intergenic | 35.0% | |
| !! | AGTTGATGAAGATTACCGTA+AGG | + | chr8_1:13348952-13348971 | None:intergenic | 35.0% |
| !! | AAATTCTTGGAGCATTGGTT+GGG | - | chr8_1:13347421-13347440 | Msa1179770:intron | 35.0% |
| ! | CATCTTAAGATTTTTGTGGC+TGG | - | chr8_1:13347554-13347573 | Msa1179770:intron | 35.0% |
| !! | AAAAGCACCAACTGAGAAAA+GGG | + | chr8_1:13347739-13347758 | None:intergenic | 35.0% |
| TCAAGAATCATGATGAGACT+GGG | + | chr8_1:13348001-13348020 | None:intergenic | 35.0% | |
| ATCAAGAATCATGATGAGAC+TGG | + | chr8_1:13348002-13348021 | None:intergenic | 35.0% | |
| CTTGATATTGCAAAGAATCG+CGG | - | chr8_1:13348016-13348035 | Msa1179770:CDS | 35.0% | |
| ! | TCAGCTTCCAATTGCATTTT+TGG | - | chr8_1:13348119-13348138 | Msa1179770:intron | 35.0% |
| CCAAACACCAAAAATGCAAT+TGG | + | chr8_1:13348129-13348148 | None:intergenic | 35.0% | |
| !!! | CCAATTGCATTTTTGGTGTT+TGG | - | chr8_1:13348126-13348145 | Msa1179770:intron | 35.0% |
| ATGCCTCACATATGTATTCT+AGG | + | chr8_1:13348206-13348225 | None:intergenic | 35.0% | |
| ! | TATGTGAGGCATCAATAGAA+TGG | - | chr8_1:13348214-13348233 | Msa1179770:intron | 35.0% |
| !! | TTCTGGAGGTGGATTTATTT+TGG | - | chr8_1:13348305-13348324 | Msa1179770:intron | 35.0% |
| !! | TCTGGAGGTGGATTTATTTT+GGG | - | chr8_1:13348306-13348325 | Msa1179770:intron | 35.0% |
| TGCTTAACAATGTTGTTGAG+CGG | - | chr8_1:13348390-13348409 | Msa1179770:CDS | 35.0% | |
| CATTAGCGGTTATAGTGTAA+CGG | + | chr8_1:13348541-13348560 | None:intergenic | 35.0% | |
| CGCATATCATTGAACATTAG+CGG | + | chr8_1:13348555-13348574 | None:intergenic | 35.0% | |
| CAATTCGCAATTGAAAACTC+TGG | + | chr8_1:13348631-13348650 | None:intergenic | 35.0% | |
| !! | AGTTGATGAAGATTACCGTA+AGG | + | chr8_1:13348952-13348971 | None:intergenic | 35.0% |
| ! | GTTTTTGTGTGTGTGAATGC+AGG | - | chr8_1:13347292-13347311 | Msa1179770:CDS | 40.0% |
| GAATGCAGGTTGTGACATTA+AGG | - | chr8_1:13347306-13347325 | Msa1179770:intron | 40.0% | |
| AATTGATTGAAGTGTGCCCA+AGG | + | chr8_1:13347372-13347391 | None:intergenic | 40.0% | |
| TGGAGCATAAGCCAAATTCT+TGG | - | chr8_1:13347408-13347427 | Msa1179770:intron | 40.0% | |
| AAGCCAAATTCTTGGAGCAT+TGG | - | chr8_1:13347416-13347435 | Msa1179770:intron | 40.0% | |
| CAACCAATGCTCCAAGAATT+TGG | + | chr8_1:13347422-13347441 | None:intergenic | 40.0% | |
| !! | CAAATTCTTGGAGCATTGGT+TGG | - | chr8_1:13347420-13347439 | Msa1179770:intron | 40.0% |
| !! | CAAAAGCACCAACTGAGAAA+AGG | + | chr8_1:13347740-13347759 | None:intergenic | 40.0% |
| !! | AGTTGGTGCTTTTGTCTGTT+TGG | - | chr8_1:13347746-13347765 | Msa1179770:intron | 40.0% |
| AGAACTCTTAGTGAGTGAGA+GGG | + | chr8_1:13347810-13347829 | None:intergenic | 40.0% | |
| TAGAACTCTTAGTGAGTGAG+AGG | + | chr8_1:13347811-13347830 | None:intergenic | 40.0% | |
| !! | TGAAGCATTCAAGTTGCACA+AGG | - | chr8_1:13348152-13348171 | Msa1179770:intron | 40.0% |
| AAGGATCACAGAATGAGGAT+GGG | - | chr8_1:13348171-13348190 | Msa1179770:intron | 40.0% | |
| GAGCCTAGAATACATATGTG+AGG | - | chr8_1:13348200-13348219 | Msa1179770:intron | 40.0% | |
| TGTGCAATGAGTGGTATTGT+AGG | - | chr8_1:13348258-13348277 | Msa1179770:CDS | 40.0% | |
| GGTATTGTAGGTGGAATTGT+TGG | - | chr8_1:13348270-13348289 | Msa1179770:CDS | 40.0% | |
| ATTGTAGGTGGAATTGTTGG+AGG | - | chr8_1:13348273-13348292 | Msa1179770:CDS | 40.0% | |
| !!! | CTGGAGGTGGATTTATTTTG+GGG | - | chr8_1:13348307-13348326 | Msa1179770:intron | 40.0% |
| GGAACATATAGTGTACCTGA+GGG | + | chr8_1:13348359-13348378 | None:intergenic | 40.0% | |
| GAGCGGATCGCAAAAAATAA+CGG | - | chr8_1:13348407-13348426 | Msa1179770:CDS | 40.0% | |
| TGATTCGCAATTGACAACAC+CGG | + | chr8_1:13348493-13348512 | None:intergenic | 40.0% | |
| GTGTTGTCAATTGCGAATCA+CGG | - | chr8_1:13348493-13348512 | Msa1179770:intron | 40.0% | |
| ! | CACAAATGTTGTTGTTGCAC+TGG | + | chr8_1:13348869-13348888 | None:intergenic | 40.0% |
| AAGAGGTTCCTTATGCCTTA+CGG | - | chr8_1:13348934-13348953 | Msa1179770:intron | 40.0% | |
| GAAGATTACCGTAAGGCATA+AGG | + | chr8_1:13348945-13348964 | None:intergenic | 40.0% | |
| ! | GTTTTTGTGTGTGTGAATGC+AGG | - | chr8_1:13347292-13347311 | Msa1179770:CDS | 40.0% |
| GAATGCAGGTTGTGACATTA+AGG | - | chr8_1:13347306-13347325 | Msa1179770:intron | 40.0% | |
| AATTGATTGAAGTGTGCCCA+AGG | + | chr8_1:13347372-13347391 | None:intergenic | 40.0% | |
| TGGAGCATAAGCCAAATTCT+TGG | - | chr8_1:13347408-13347427 | Msa1179770:intron | 40.0% | |
| AAGCCAAATTCTTGGAGCAT+TGG | - | chr8_1:13347416-13347435 | Msa1179770:intron | 40.0% | |
| CAACCAATGCTCCAAGAATT+TGG | + | chr8_1:13347422-13347441 | None:intergenic | 40.0% | |
| !! | CAAATTCTTGGAGCATTGGT+TGG | - | chr8_1:13347420-13347439 | Msa1179770:intron | 40.0% |
| !! | CAAAAGCACCAACTGAGAAA+AGG | + | chr8_1:13347740-13347759 | None:intergenic | 40.0% |
| !! | AGTTGGTGCTTTTGTCTGTT+TGG | - | chr8_1:13347746-13347765 | Msa1179770:intron | 40.0% |
| AGAACTCTTAGTGAGTGAGA+GGG | + | chr8_1:13347810-13347829 | None:intergenic | 40.0% | |
| TAGAACTCTTAGTGAGTGAG+AGG | + | chr8_1:13347811-13347830 | None:intergenic | 40.0% | |
| !! | TGAAGCATTCAAGTTGCACA+AGG | - | chr8_1:13348152-13348171 | Msa1179770:intron | 40.0% |
| AAGGATCACAGAATGAGGAT+GGG | - | chr8_1:13348171-13348190 | Msa1179770:intron | 40.0% | |
| GAGCCTAGAATACATATGTG+AGG | - | chr8_1:13348200-13348219 | Msa1179770:intron | 40.0% | |
| TGTGCAATGAGTGGTATTGT+AGG | - | chr8_1:13348258-13348277 | Msa1179770:CDS | 40.0% | |
| GGTATTGTAGGTGGAATTGT+TGG | - | chr8_1:13348270-13348289 | Msa1179770:CDS | 40.0% | |
| ATTGTAGGTGGAATTGTTGG+AGG | - | chr8_1:13348273-13348292 | Msa1179770:CDS | 40.0% | |
| !!! | CTGGAGGTGGATTTATTTTG+GGG | - | chr8_1:13348307-13348326 | Msa1179770:intron | 40.0% |
| GGAACATATAGTGTACCTGA+GGG | + | chr8_1:13348359-13348378 | None:intergenic | 40.0% | |
| GAGCGGATCGCAAAAAATAA+CGG | - | chr8_1:13348407-13348426 | Msa1179770:CDS | 40.0% | |
| TGATTCGCAATTGACAACAC+CGG | + | chr8_1:13348493-13348512 | None:intergenic | 40.0% | |
| GTGTTGTCAATTGCGAATCA+CGG | - | chr8_1:13348493-13348512 | Msa1179770:intron | 40.0% | |
| ! | CACAAATGTTGTTGTTGCAC+TGG | + | chr8_1:13348869-13348888 | None:intergenic | 40.0% |
| AAGAGGTTCCTTATGCCTTA+CGG | - | chr8_1:13348934-13348953 | Msa1179770:intron | 40.0% | |
| GAAGATTACCGTAAGGCATA+AGG | + | chr8_1:13348945-13348964 | None:intergenic | 40.0% | |
| ACAGCCATAGTGTGTTCCTT+GGG | - | chr8_1:13347353-13347372 | Msa1179770:intron | 45.0% | |
| ! | TGGTTTGCAGACTGATGTAG+AGG | - | chr8_1:13347878-13347897 | Msa1179770:CDS | 45.0% |
| ATGTAGAGGACTGCAGTGTA+TGG | - | chr8_1:13347892-13347911 | Msa1179770:CDS | 45.0% | |
| AGGACTGCAGTGTATGGTAT+TGG | - | chr8_1:13347898-13347917 | Msa1179770:CDS | 45.0% | |
| GGACTGCAGTGTATGGTATT+GGG | - | chr8_1:13347899-13347918 | Msa1179770:CDS | 45.0% | |
| ! | GTATGGTATTGGGTGCTCTT+CGG | - | chr8_1:13347909-13347928 | Msa1179770:CDS | 45.0% |
| ATGAATCGCAGTAATGGTCG+CGG | - | chr8_1:13347972-13347991 | Msa1179770:CDS | 45.0% | |
| TGCACAAGGATCACAGAATG+AGG | - | chr8_1:13348166-13348185 | Msa1179770:intron | 45.0% | |
| CAAGGATCACAGAATGAGGA+TGG | - | chr8_1:13348170-13348189 | Msa1179770:intron | 45.0% | |
| CTTGCATCTTGTGCAATGAG+TGG | - | chr8_1:13348249-13348268 | Msa1179770:intron | 45.0% | |
| GCAATGAGTGGTATTGTAGG+TGG | - | chr8_1:13348261-13348280 | Msa1179770:CDS | 45.0% | |
| GGAATTGTTGGAGGCTTACT+TGG | - | chr8_1:13348282-13348301 | Msa1179770:intron | 45.0% | |
| ACACCTATCTCAAGGAGAAG+AGG | + | chr8_1:13348333-13348352 | None:intergenic | 45.0% | |
| GGGAACATATAGTGTACCTG+AGG | + | chr8_1:13348360-13348379 | None:intergenic | 45.0% | |
| ! | TTAGCCGCAATTGTGTTGAC+CGG | - | chr8_1:13348471-13348490 | Msa1179770:intron | 45.0% |
| AACACCGGTCAACACAATTG+CGG | + | chr8_1:13348478-13348497 | None:intergenic | 45.0% | |
| ACAGCCATAGTGTGTTCCTT+GGG | - | chr8_1:13347353-13347372 | Msa1179770:intron | 45.0% | |
| ! | TGGTTTGCAGACTGATGTAG+AGG | - | chr8_1:13347878-13347897 | Msa1179770:CDS | 45.0% |
| ATGTAGAGGACTGCAGTGTA+TGG | - | chr8_1:13347892-13347911 | Msa1179770:CDS | 45.0% | |
| AGGACTGCAGTGTATGGTAT+TGG | - | chr8_1:13347898-13347917 | Msa1179770:CDS | 45.0% | |
| GGACTGCAGTGTATGGTATT+GGG | - | chr8_1:13347899-13347918 | Msa1179770:CDS | 45.0% | |
| ! | GTATGGTATTGGGTGCTCTT+CGG | - | chr8_1:13347909-13347928 | Msa1179770:CDS | 45.0% |
| ATGAATCGCAGTAATGGTCG+CGG | - | chr8_1:13347972-13347991 | Msa1179770:CDS | 45.0% | |
| TGCACAAGGATCACAGAATG+AGG | - | chr8_1:13348166-13348185 | Msa1179770:intron | 45.0% | |
| CAAGGATCACAGAATGAGGA+TGG | - | chr8_1:13348170-13348189 | Msa1179770:intron | 45.0% | |
| CTTGCATCTTGTGCAATGAG+TGG | - | chr8_1:13348249-13348268 | Msa1179770:intron | 45.0% | |
| GCAATGAGTGGTATTGTAGG+TGG | - | chr8_1:13348261-13348280 | Msa1179770:CDS | 45.0% | |
| GGAATTGTTGGAGGCTTACT+TGG | - | chr8_1:13348282-13348301 | Msa1179770:intron | 45.0% | |
| ACACCTATCTCAAGGAGAAG+AGG | + | chr8_1:13348333-13348352 | None:intergenic | 45.0% | |
| GGGAACATATAGTGTACCTG+AGG | + | chr8_1:13348360-13348379 | None:intergenic | 45.0% | |
| ! | TTAGCCGCAATTGTGTTGAC+CGG | - | chr8_1:13348471-13348490 | Msa1179770:intron | 45.0% |
| AACACCGGTCAACACAATTG+CGG | + | chr8_1:13348478-13348497 | None:intergenic | 45.0% | |
| CACAGCCATAGTGTGTTCCT+TGG | - | chr8_1:13347352-13347371 | Msa1179770:intron | 50.0% | |
| TGTGCCCAAGGAACACACTA+TGG | + | chr8_1:13347360-13347379 | None:intergenic | 50.0% | |
| AGGGGAGAGACTTACAGCAT+AGG | + | chr8_1:13347468-13347487 | None:intergenic | 50.0% | |
| ACAGAATGAGGATGGGCACA+GGG | - | chr8_1:13348178-13348197 | Msa1179770:intron | 50.0% | |
| GTTGGAGGCTTACTTGGTTC+TGG | - | chr8_1:13348288-13348307 | Msa1179770:intron | 50.0% | |
| GAGGGATGACACCTATCTCA+AGG | + | chr8_1:13348341-13348360 | None:intergenic | 50.0% | |
| ! | TGAGATAGGTGTCATCCCTC+AGG | - | chr8_1:13348341-13348360 | Msa1179770:intron | 50.0% |
| CACAGCCATAGTGTGTTCCT+TGG | - | chr8_1:13347352-13347371 | Msa1179770:intron | 50.0% | |
| TGTGCCCAAGGAACACACTA+TGG | + | chr8_1:13347360-13347379 | None:intergenic | 50.0% | |
| AGGGGAGAGACTTACAGCAT+AGG | + | chr8_1:13347468-13347487 | None:intergenic | 50.0% | |
| ACAGAATGAGGATGGGCACA+GGG | - | chr8_1:13348178-13348197 | Msa1179770:intron | 50.0% | |
| GTTGGAGGCTTACTTGGTTC+TGG | - | chr8_1:13348288-13348307 | Msa1179770:intron | 50.0% | |
| GAGGGATGACACCTATCTCA+AGG | + | chr8_1:13348341-13348360 | None:intergenic | 50.0% | |
| ! | TGAGATAGGTGTCATCCCTC+AGG | - | chr8_1:13348341-13348360 | Msa1179770:intron | 50.0% |
| CACAGAATGAGGATGGGCAC+AGG | - | chr8_1:13348177-13348196 | Msa1179770:intron | 55.0% | |
| !! | GGAGGCTTACTTGGTTCTGG+AGG | - | chr8_1:13348291-13348310 | Msa1179770:intron | 55.0% |
| !! | GGCTTACTTGGTTCTGGAGG+TGG | - | chr8_1:13348294-13348313 | Msa1179770:intron | 55.0% |
| GGGCCTCTTCTCCTTGAGAT+AGG | - | chr8_1:13348327-13348346 | Msa1179770:intron | 55.0% | |
| CACAGAATGAGGATGGGCAC+AGG | - | chr8_1:13348177-13348196 | Msa1179770:intron | 55.0% | |
| !! | GGAGGCTTACTTGGTTCTGG+AGG | - | chr8_1:13348291-13348310 | Msa1179770:intron | 55.0% |
| !! | GGCTTACTTGGTTCTGGAGG+TGG | - | chr8_1:13348294-13348313 | Msa1179770:intron | 55.0% |
| GGGCCTCTTCTCCTTGAGAT+AGG | - | chr8_1:13348327-13348346 | Msa1179770:intron | 55.0% | |
| ! | TTGGGTGCTCTTCGGCTTGC+AGG | - | chr8_1:13347917-13347936 | Msa1179770:CDS | 60.0% |
| ! | TTGGGTGCTCTTCGGCTTGC+AGG | - | chr8_1:13347917-13347936 | Msa1179770:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 13347204 | 13348984 | 13347204 | ID=Msa1179770;Name=Msa1179770 |
| chr8_1 | mRNA | 13347204 | 13348984 | 13347204 | ID=Msa1179770-mRNA-1;Parent=Msa1179770;Name=Msa1179770-mRNA-1;_AED=0.58;_eAED=0.58;_QI=0|0.5|0.57|0.57|1|1|7|0|240 |
| chr8_1 | exon | 13348961 | 13348984 | 13348961 | ID=Msa1179770-mRNA-1:exon:4867;Parent=Msa1179770-mRNA-1 |
| chr8_1 | exon | 13348716 | 13348874 | 13348716 | ID=Msa1179770-mRNA-1:exon:4866;Parent=Msa1179770-mRNA-1 |
| chr8_1 | exon | 13348390 | 13348440 | 13348390 | ID=Msa1179770-mRNA-1:exon:4865;Parent=Msa1179770-mRNA-1 |
| chr8_1 | exon | 13348250 | 13348300 | 13348250 | ID=Msa1179770-mRNA-1:exon:4864;Parent=Msa1179770-mRNA-1 |
| chr8_1 | exon | 13347826 | 13348065 | 13347826 | ID=Msa1179770-mRNA-1:exon:4863;Parent=Msa1179770-mRNA-1 |
| chr8_1 | exon | 13347474 | 13347556 | 13347474 | ID=Msa1179770-mRNA-1:exon:4862;Parent=Msa1179770-mRNA-1 |
| chr8_1 | exon | 13347204 | 13347318 | 13347204 | ID=Msa1179770-mRNA-1:exon:4861;Parent=Msa1179770-mRNA-1 |
| chr8_1 | CDS | 13348961 | 13348984 | 13348961 | ID=Msa1179770-mRNA-1:cds;Parent=Msa1179770-mRNA-1 |
| chr8_1 | CDS | 13348716 | 13348874 | 13348716 | ID=Msa1179770-mRNA-1:cds;Parent=Msa1179770-mRNA-1 |
| chr8_1 | CDS | 13348390 | 13348440 | 13348390 | ID=Msa1179770-mRNA-1:cds;Parent=Msa1179770-mRNA-1 |
| chr8_1 | CDS | 13348250 | 13348300 | 13348250 | ID=Msa1179770-mRNA-1:cds;Parent=Msa1179770-mRNA-1 |
| chr8_1 | CDS | 13347826 | 13348065 | 13347826 | ID=Msa1179770-mRNA-1:cds;Parent=Msa1179770-mRNA-1 |
| chr8_1 | CDS | 13347474 | 13347556 | 13347474 | ID=Msa1179770-mRNA-1:cds;Parent=Msa1179770-mRNA-1 |
| chr8_1 | CDS | 13347204 | 13347318 | 13347204 | ID=Msa1179770-mRNA-1:cds;Parent=Msa1179770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
