Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0680100 | XP_039683054.1 | 53.385 | 517 | 183 | 15 | 21 | 492 | 38 | 541 | 8.44e-147 | 442 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0680100 | sp|Q9FLH8|SCRK7_ARATH | 65.000 | 300 | 99 | 3 | 198 | 494 | 23 | 319 | 3.10e-128 | 379 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0680100 | G7IC32 | 72.436 | 312 | 78 | 5 | 186 | 494 | 13 | 319 | 6.42e-147 | 433 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0617360 | Msa0680100 | 0.813058 | 3.101620e-51 | -8.615850e-47 |
| Msa0680090 | Msa0680100 | 0.891423 | 4.027602e-74 | -8.615850e-47 |
| Msa0680100 | Msa0773540 | 0.806582 | 7.669407e-50 | -8.615850e-47 |
| Msa0680100 | Msa0850450 | 0.801942 | 7.095941e-49 | -8.615850e-47 |
| Msa0680100 | Msa0877250 | 0.820586 | 6.343156e-53 | -8.615850e-47 |
| Msa0680100 | Msa0966750 | 0.811054 | 8.479146e-51 | -8.615850e-47 |
| Msa0680100 | Msa0997080 | 0.802375 | 5.779950e-49 | -8.615850e-47 |
| Msa0680100 | Msa1030970 | 0.808305 | 3.305616e-50 | -8.615850e-47 |
| Msa0680100 | Msa1077320 | 0.813352 | 2.673196e-51 | -8.615850e-47 |
| Msa0680100 | Msa1079100 | 0.839054 | 1.993398e-57 | -8.615850e-47 |
| Msa0680100 | Msa1116990 | 0.824814 | 6.581109e-54 | -8.615850e-47 |
| Msa0680100 | Msa1124010 | 0.801232 | 9.920694e-49 | -8.615850e-47 |
| Msa0680100 | Msa1173470 | 0.847904 | 8.608815e-60 | -8.615850e-47 |
| Msa0680100 | Msa1179770 | 0.816610 | 5.061282e-52 | -8.615850e-47 |
| Msa0435230 | Msa0680100 | 0.811871 | 5.634912e-51 | -8.615850e-47 |
| Msa0473270 | Msa0680100 | 0.815163 | 1.064105e-51 | -8.615850e-47 |
| Msa0479340 | Msa0680100 | 0.818609 | 1.792827e-52 | -8.615850e-47 |
| Msa0320120 | Msa0680100 | 0.816351 | 5.783058e-52 | -8.615850e-47 |
| Msa0354800 | Msa0680100 | -0.809040 | 2.302505e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0680100 | MtrunA17_Chr1g0204101 | 72.436 | 312 | 78 | 5 | 186 | 494 | 13 | 319 | 1.24e-150 | 433 |
| Msa0680100 | MtrunA17_Chr6g0474331 | 70.492 | 305 | 84 | 3 | 193 | 494 | 23 | 324 | 4.95e-145 | 419 |
| Msa0680100 | MtrunA17_Chr1g0177771 | 52.224 | 517 | 181 | 16 | 21 | 492 | 38 | 533 | 2.78e-143 | 422 |
| Msa0680100 | MtrunA17_Chr1g0183241 | 54.300 | 407 | 140 | 9 | 111 | 495 | 4 | 386 | 7.45e-131 | 385 |
| Msa0680100 | MtrunA17_Chr5g0434971 | 60.577 | 312 | 116 | 4 | 186 | 494 | 55 | 362 | 3.74e-115 | 344 |
| Msa0680100 | MtrunA17_Chr1g0177321 | 48.517 | 472 | 147 | 15 | 88 | 492 | 8 | 450 | 4.36e-110 | 335 |
| Msa0680100 | MtrunA17_Chr4g0033631 | 56.040 | 298 | 127 | 2 | 196 | 492 | 13 | 307 | 4.55e-107 | 322 |
| Msa0680100 | MtrunA17_Chr1g0183661 | 61.053 | 285 | 93 | 5 | 213 | 494 | 3 | 272 | 1.58e-106 | 319 |
| Msa0680100 | MtrunA17_Chr2g0329451 | 55.369 | 298 | 129 | 2 | 196 | 492 | 12 | 306 | 5.61e-106 | 319 |
| Msa0680100 | MtrunA17_Chr1g0171921 | 60.841 | 309 | 108 | 7 | 190 | 492 | 175 | 476 | 1.89e-105 | 324 |
| Msa0680100 | MtrunA17_Chr1g0188291 | 54.730 | 296 | 130 | 2 | 198 | 492 | 8 | 300 | 3.35e-104 | 314 |
| Msa0680100 | MtrunA17_Chr1g0176221 | 52.968 | 219 | 71 | 3 | 274 | 492 | 1 | 187 | 4.53e-59 | 194 |
| Msa0680100 | MtrunA17_Chr7g0246421 | 53.529 | 170 | 77 | 1 | 324 | 491 | 2 | 171 | 5.33e-55 | 182 |
| Msa0680100 | MtrunA17_Chr4g0020911 | 62.879 | 132 | 47 | 1 | 324 | 453 | 56 | 187 | 2.59e-44 | 154 |
| Msa0680100 | MtrunA17_Chr7g0246411 | 53.077 | 130 | 55 | 3 | 198 | 324 | 41 | 167 | 1.47e-31 | 119 |
| Msa0680100 | MtrunA17_Chr5g0419371 | 27.327 | 333 | 197 | 8 | 198 | 492 | 210 | 535 | 7.60e-30 | 122 |
| Msa0680100 | MtrunA17_Chr8g0386161 | 44.937 | 158 | 70 | 4 | 25 | 166 | 76 | 232 | 6.31e-29 | 120 |
| Msa0680100 | MtrunA17_Chr4g0008441 | 28.070 | 342 | 197 | 6 | 198 | 492 | 93 | 432 | 3.34e-28 | 117 |
| Msa0680100 | MtrunA17_Chr4g0020921 | 37.949 | 195 | 61 | 7 | 109 | 251 | 2 | 188 | 1.85e-22 | 97.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0680100 | AT5G51830.2 | 65.000 | 300 | 99 | 3 | 198 | 494 | 23 | 319 | 3.15e-129 | 379 |
| Msa0680100 | AT5G51830.1 | 65.000 | 300 | 99 | 3 | 198 | 494 | 23 | 319 | 3.15e-129 | 379 |
| Msa0680100 | AT1G66430.1 | 60.390 | 308 | 115 | 4 | 190 | 494 | 57 | 360 | 1.95e-120 | 358 |
| Msa0680100 | AT1G06030.1 | 55.446 | 303 | 129 | 3 | 191 | 492 | 6 | 303 | 6.17e-106 | 319 |
| Msa0680100 | AT2G31390.1 | 53.974 | 302 | 135 | 2 | 192 | 492 | 3 | 301 | 1.32e-103 | 313 |
| Msa0680100 | AT4G10260.1 | 54.730 | 296 | 130 | 2 | 198 | 492 | 6 | 298 | 1.16e-102 | 310 |
| Msa0680100 | AT1G06020.1 | 53.535 | 297 | 134 | 2 | 197 | 492 | 9 | 302 | 6.11e-102 | 310 |
| Msa0680100 | AT3G59480.1 | 52.459 | 305 | 141 | 2 | 189 | 492 | 1 | 302 | 4.96e-101 | 306 |
| Msa0680100 | AT1G50390.1 | 45.070 | 142 | 49 | 1 | 351 | 492 | 7 | 119 | 1.25e-32 | 122 |
| Msa0680100 | AT3G54090.1 | 30.164 | 305 | 175 | 6 | 222 | 492 | 141 | 441 | 1.87e-30 | 124 |
| Msa0680100 | AT1G69200.1 | 27.429 | 350 | 203 | 9 | 179 | 492 | 198 | 532 | 4.44e-29 | 121 |
| Msa0680100 | AT5G63540.1 | 41.463 | 164 | 79 | 5 | 19 | 166 | 98 | 260 | 2.88e-23 | 103 |
| Msa0680100 | AT5G63540.2 | 41.463 | 164 | 79 | 5 | 19 | 166 | 98 | 260 | 3.24e-23 | 103 |
Find 130 sgRNAs with CRISPR-Local
Find 590 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTTCAAGAAAGCTCTTTC+TGG | 0.186607 | 4_4:+38910652 | Msa0680100:CDS |
| CAAACAGATTTGCGCCATTT+TGG | 0.212843 | 4_4:-38909489 | None:intergenic |
| CTGATAGGGTTCTCCAACTC+TGG | 0.227406 | 4_4:+38909438 | Msa0680100:CDS |
| CATATGATCTCTAGGATTTC+GGG | 0.249052 | 4_4:-38911341 | None:intergenic |
| CCTGAAAATATTATAGTATT+GGG | 0.251478 | 4_4:+38910090 | Msa0680100:CDS |
| CCTTGATCGCGCCACATATA+TGG | 0.255816 | 4_4:-38915700 | None:intergenic |
| GTGAAACGTTGATAGATTTC+CGG | 0.258185 | 4_4:+38910593 | Msa0680100:CDS |
| CATAGTCCCAATCTCAAATT+TGG | 0.269239 | 4_4:-38911596 | None:intergenic |
| CAAATTTGAGATTGGGACTA+TGG | 0.273278 | 4_4:+38911597 | Msa0680100:CDS |
| CAGGCTAAAATATTCCATTA+TGG | 0.292003 | 4_4:+38911482 | Msa0680100:intron |
| GCATATGATCTCTAGGATTT+CGG | 0.292748 | 4_4:-38911342 | None:intergenic |
| TTGTGCGCCTCCTGGATTAA+AGG | 0.303460 | 4_4:+38909931 | Msa0680100:CDS |
| TAGGTTGGAGCAGATGAATT+TGG | 0.306305 | 4_4:+38911181 | Msa0680100:intron |
| CAATTAGAAGCTTGTGATTA+GGG | 0.307440 | 4_4:-38911876 | None:intergenic |
| CGATGGTCCCTTCATATTAC+AGG | 0.311149 | 4_4:+38909595 | Msa0680100:CDS |
| TCCTAGAGATCATATGCTTC+TGG | 0.311778 | 4_4:+38911348 | Msa0680100:CDS |
| AGGTTGGAGCAGATGAATTT+GGG | 0.318393 | 4_4:+38911182 | Msa0680100:intron |
| ACAATTAGAAGCTTGTGATT+AGG | 0.324413 | 4_4:-38911877 | None:intergenic |
| CTTGATGTTTGTGCGCCTCC+TGG | 0.325990 | 4_4:+38909923 | Msa0680100:CDS |
| GTCCATGAAATTAGAAAATT+CGG | 0.332161 | 4_4:+38909821 | Msa0680100:CDS |
| GGCAGTTGGCATCTCTAAGC+TGG | 0.347511 | 4_4:+38910687 | Msa0680100:CDS |
| AGTGGACTGGTTGTTTGTTT+TGG | 0.362156 | 4_4:+38910571 | Msa0680100:CDS |
| AGACTATGATGTCTCCAAAA+TGG | 0.367873 | 4_4:+38909475 | Msa0680100:CDS |
| CATCACAGAAACCTCCAATT+TGG | 0.367988 | 4_4:-38915471 | None:intergenic |
| TTATAATGCCAGAACCATAT+TGG | 0.371875 | 4_4:+38911264 | Msa0680100:CDS |
| TCCTGAAAATATTATAGTAT+TGG | 0.381415 | 4_4:+38910089 | Msa0680100:CDS |
| TTTGCTACGCTTGGAGTTGA+TGG | 0.384770 | 4_4:+38911289 | Msa0680100:CDS |
| AAGCGTAGCAAAAGCCAATA+TGG | 0.387583 | 4_4:-38911278 | None:intergenic |
| GAAAGGGTATAATGAGCATA+TGG | 0.388193 | 4_4:+38911639 | Msa0680100:CDS |
| GGATCAAGCCGATGTCATTA+AGG | 0.392693 | 4_4:+38911661 | Msa0680100:CDS |
| AGCAAAAGCCAATATGGTTC+TGG | 0.395314 | 4_4:-38911272 | None:intergenic |
| CAAAATGGCGCAAATCTGTT+TGG | 0.395582 | 4_4:+38909490 | Msa0680100:CDS |
| TCAAACTGATGGAACCATAA+TGG | 0.399197 | 4_4:-38911496 | None:intergenic |
| GTATGATCCAAATTTGAGAT+TGG | 0.408251 | 4_4:+38911589 | Msa0680100:CDS |
| TATGATCCAAATTTGAGATT+GGG | 0.417777 | 4_4:+38911590 | Msa0680100:CDS |
| AGAGAGACAAGGTTGCTGAT+AGG | 0.421820 | 4_4:+38909423 | Msa0680100:CDS |
| CGACGTTGAGTCACTGTGAC+TGG | 0.428117 | 4_4:-38910133 | None:intergenic |
| TTGTGCACATGTTCATTAAG+AGG | 0.432199 | 4_4:-38909563 | None:intergenic |
| CAAAATGATATTGATACGTC+TGG | 0.432801 | 4_4:+38911229 | Msa0680100:CDS |
| ACTCTCTACCCACTCTTTGC+CGG | 0.437479 | 4_4:-38910612 | None:intergenic |
| CTTACCGAACTAAAGGCAAT+TGG | 0.438509 | 4_4:-38908699 | None:intergenic |
| TGATGATGATGCTGTATTCC+AGG | 0.439082 | 4_4:+38911843 | Msa0680100:CDS |
| GTTGATGATGCATTTGTTAG+TGG | 0.439175 | 4_4:+38915514 | Msa0680100:CDS |
| TGAATTACCTGGAAAATACT+TGG | 0.448299 | 4_4:-38915562 | None:intergenic |
| ATTAGAAAATTCGGTAATCA+AGG | 0.454842 | 4_4:+38909830 | Msa0680100:CDS |
| CTTGATCGCGCCACATATAT+GGG | 0.456052 | 4_4:-38915699 | None:intergenic |
| GAGAGACAAGGTTGCTGATA+GGG | 0.458553 | 4_4:+38909424 | Msa0680100:CDS |
| GCTTCCAATTGCCTTTAGTT+CGG | 0.462013 | 4_4:+38908695 | Msa0680100:CDS |
| GCAGTTGGCATCTCTAAGCT+GGG | 0.467387 | 4_4:+38910688 | Msa0680100:CDS |
| TTGAGGATTGCTAAAGAGTC+CGG | 0.477772 | 4_4:+38911554 | Msa0680100:CDS |
| TTGATGATGCATTTGTTAGT+GGG | 0.479441 | 4_4:+38915515 | Msa0680100:CDS |
| TGGAAGCTTCGAAGATCTCC+AGG | 0.484573 | 4_4:-38908679 | None:intergenic |
| GATCTCAATTCTTGTGGTAC+CGG | 0.484795 | 4_4:+38909530 | Msa0680100:CDS |
| AACGGTGAGACGTGGAAGAT+TGG | 0.484932 | 4_4:+38910059 | Msa0680100:CDS |
| CCATATATGTGGCGCGATCA+AGG | 0.491424 | 4_4:+38915700 | Msa0680100:CDS |
| ACTTACCTAGGTTGCTTGGC+GGG | 0.491490 | 4_4:-38910170 | None:intergenic |
| GAAGAGAGACAGAGCAATCT+CGG | 0.491901 | 4_4:+38909361 | Msa0680100:intron |
| GATGAGCGTGTTGACATAAC+TGG | 0.492096 | 4_4:+38915490 | Msa0680100:CDS |
| ATCAGACGAGGCTGCTCGAA+AGG | 0.494005 | 4_4:+38911622 | Msa0680100:CDS |
| GAAAGAGCTTTCTTGAAAGC+AGG | 0.494865 | 4_4:-38910649 | None:intergenic |
| TTTCGAGCAGCCTCGTCTGA+TGG | 0.495454 | 4_4:-38911620 | None:intergenic |
| TGATAGGGTTCTCCAACTCT+GGG | 0.504669 | 4_4:+38909439 | Msa0680100:CDS |
| ATCATACGAGAGAATGCAAC+CGG | 0.513698 | 4_4:-38911573 | None:intergenic |
| TTTGAAATGAATCCCAGAGT+TGG | 0.517994 | 4_4:-38909451 | None:intergenic |
| GACTTACCTAGGTTGCTTGG+CGG | 0.518092 | 4_4:-38910171 | None:intergenic |
| GGAACCTACCTGTAATATGA+AGG | 0.519249 | 4_4:-38909603 | None:intergenic |
| GCAGATCAGTGCAGTTGAGT+TGG | 0.520437 | 4_4:+38911798 | Msa0680100:intron |
| ACCCGAGTTTCAAAAGCTCA+TGG | 0.520736 | 4_4:-38909391 | None:intergenic |
| GCTAATCCTTACCGAACTAA+AGG | 0.521196 | 4_4:-38908706 | None:intergenic |
| CTGAAAATATTATAGTATTG+GGG | 0.525050 | 4_4:+38910091 | Msa0680100:CDS |
| TTTGACTGTTTGAACACCAT+CGG | 0.530622 | 4_4:-38909870 | None:intergenic |
| CAAACATCAAGGTCAACAAC+AGG | 0.532241 | 4_4:-38909911 | None:intergenic |
| CAGTTGGCATCTCTAAGCTG+GGG | 0.533061 | 4_4:+38910689 | Msa0680100:CDS |
| AAAATTTACCTTAATGACAT+CGG | 0.536806 | 4_4:-38911669 | None:intergenic |
| TCCAGAAGCATATGATCTCT+AGG | 0.538632 | 4_4:-38911349 | None:intergenic |
| ACTCTCCCGCCAAGCAACCT+AGG | 0.540853 | 4_4:+38910165 | Msa0680100:CDS |
| AAGGACTTACCTAGGTTGCT+TGG | 0.542408 | 4_4:-38910174 | None:intergenic |
| GATAGATTTCCGGCAAAGAG+TGG | 0.546022 | 4_4:+38910603 | Msa0680100:CDS |
| TGGCTCATCAATCAAACTGA+TGG | 0.547967 | 4_4:-38911507 | None:intergenic |
| TTAAAGGCACCTTCTTGATG+AGG | 0.548253 | 4_4:-38911393 | None:intergenic |
| AACGAAGAAACCTTTAATCC+AGG | 0.549242 | 4_4:-38909941 | None:intergenic |
| AGTTGGCATCTCTAAGCTGG+GGG | 0.550542 | 4_4:+38910690 | Msa0680100:CDS |
| AAGCTTCTAATTGTCACTGA+AGG | 0.551946 | 4_4:+38911886 | Msa0680100:CDS |
| GTACGATGAGCCGACTTGCA+TGG | 0.553544 | 4_4:-38911527 | None:intergenic |
| ATTGTCACTGAAGGGTCAAA+CGG | 0.553842 | 4_4:+38911895 | Msa0680100:CDS |
| TCTTCCGATCTCAATTCTTG+TGG | 0.554279 | 4_4:+38909524 | Msa0680100:CDS |
| GATTAGGGCGTAAAAGCTCC+TGG | 0.555038 | 4_4:-38911861 | None:intergenic |
| AAAGGGTATAATGAGCATAT+GGG | 0.561618 | 4_4:+38911640 | Msa0680100:CDS |
| TTATATGCCGCCCATATATG+TGG | 0.566558 | 4_4:+38915689 | Msa0680100:CDS |
| TCAGACGAGGCTGCTCGAAA+GGG | 0.574751 | 4_4:+38911623 | Msa0680100:CDS |
| CAGGAGGCGCACAAACATCA+AGG | 0.575331 | 4_4:-38909922 | None:intergenic |
| TCTTTCTGGTGCTGCAAACG+TGG | 0.577793 | 4_4:+38910666 | Msa0680100:CDS |
| TTTCAAAAGCTCATGGGTGA+CGG | 0.578192 | 4_4:-38909384 | None:intergenic |
| TGAAAATATTATAGTATTGG+GGG | 0.578622 | 4_4:+38910092 | Msa0680100:CDS |
| GAATTACCTGGAAAATACTT+GGG | 0.585959 | 4_4:-38915561 | None:intergenic |
| GGTCAAAATCTCTAATGTAA+CGG | 0.586449 | 4_4:+38910041 | Msa0680100:intron |
| CTGCAACAAAACAAGTGGAC+TGG | 0.587776 | 4_4:+38910558 | Msa0680100:CDS |
| TTTCTTGAAAGCAGGCACTT+CGG | 0.590586 | 4_4:-38910641 | None:intergenic |
| GACGTTGAGTCACTGTGACT+GGG | 0.594517 | 4_4:-38910132 | None:intergenic |
| CCCGAGTTTCAAAAGCTCAT+GGG | 0.595880 | 4_4:-38909390 | None:intergenic |
| GATGGTGTTCAAACAGTCAA+AGG | 0.597057 | 4_4:+38909872 | Msa0680100:CDS |
| TGATCATAACCTCATCAAGA+AGG | 0.598780 | 4_4:+38911384 | Msa0680100:CDS |
| AGCTTCTAATTGTCACTGAA+GGG | 0.598976 | 4_4:+38911887 | Msa0680100:CDS |
| AGATGAATTTGGGTATATGT+TGG | 0.599101 | 4_4:+38911192 | Msa0680100:CDS |
| TTCATCTGCAGTTATAAGCA+AGG | 0.602376 | 4_4:+38910714 | Msa0680100:CDS |
| GAAGGCTGCAACAAAACAAG+TGG | 0.603837 | 4_4:+38910553 | Msa0680100:intron |
| ATAGATTTCCGGCAAAGAGT+GGG | 0.603860 | 4_4:+38910604 | Msa0680100:CDS |
| CGGCTCATCGTACTGCCTTG+AGG | 0.612068 | 4_4:+38911537 | Msa0680100:CDS |
| GAACCTACCTGTAATATGAA+GGG | 0.612152 | 4_4:-38909602 | None:intergenic |
| TGCACATGTTCATTAAGAGG+AGG | 0.615105 | 4_4:-38909560 | None:intergenic |
| GGTGCTGCAAACGTGGCAGT+TGG | 0.623402 | 4_4:+38910673 | Msa0680100:CDS |
| GGGCGGCATATAATGCTGCA+TGG | 0.625226 | 4_4:-38915679 | None:intergenic |
| TCAAACAGTCAAAGGAGTAG+TGG | 0.631978 | 4_4:+38909880 | Msa0680100:CDS |
| TTATTAGTAAAGCTAGCATG+AGG | 0.634424 | 4_4:+38916549 | Msa0680100:intron |
| CTGAAGTTCAAAATGACCGA+TGG | 0.635588 | 4_4:+38909854 | Msa0680100:CDS |
| GAAAATATTATAGTATTGGG+GGG | 0.643157 | 4_4:+38910093 | Msa0680100:CDS |
| GGACTCTTTAGCAATCCTCA+AGG | 0.645080 | 4_4:-38911552 | None:intergenic |
| AATGAAAGAATGAAACAACC+TGG | 0.645741 | 4_4:+38908661 | None:intergenic |
| GGGACTATGGCCATCAGACG+AGG | 0.649543 | 4_4:+38911610 | Msa0680100:CDS |
| GATTGATGAGCCATGCAAGT+CGG | 0.649771 | 4_4:+38911517 | Msa0680100:CDS |
| GTGCACAAAACTACTCTCGA+TGG | 0.652622 | 4_4:+38909578 | Msa0680100:CDS |
| TCTAATGTAACGGTGAGACG+TGG | 0.656398 | 4_4:+38910051 | Msa0680100:CDS |
| GTTGGCATCTCTAAGCTGGG+GGG | 0.656864 | 4_4:+38910691 | Msa0680100:CDS |
| GTTTGCTTTGAAGAGAGACA+AGG | 0.658780 | 4_4:+38909412 | Msa0680100:CDS |
| GGTACCACAAGAATTGAGAT+CGG | 0.666538 | 4_4:-38909528 | None:intergenic |
| ATATTGATACGTCTGGCATG+CGG | 0.686631 | 4_4:+38911236 | Msa0680100:CDS |
| AATACAGCATCATCATCATG+AGG | 0.699540 | 4_4:-38911838 | None:intergenic |
| ATTAAGAGGAGGCAGTACAC+CGG | 0.703216 | 4_4:-38909549 | None:intergenic |
| GATCGCGCCACATATATGGG+CGG | 0.729574 | 4_4:-38915696 | None:intergenic |
| GAAGAAACCTTTAATCCAGG+AGG | 0.736016 | 4_4:-38909938 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTAATTTTATTATTA+CGG | + | chr4_4:38909645-38909664 | Msa0680100:intron | 0.0% |
| !! | AAAGATAATAATTTAATAAG+TGG | + | chr4_4:38910230-38910249 | Msa0680100:intron | 10.0% |
| !! | AAGATAATAATTTAATAAGT+GGG | + | chr4_4:38910231-38910250 | Msa0680100:intron | 10.0% |
| !! | TTAATTTAACAATAAGAAAA+GGG | - | chr4_4:38911076-38911095 | None:intergenic | 10.0% |
| !!! | TTTAATTTAACAATAAGAAA+AGG | - | chr4_4:38911077-38911096 | None:intergenic | 10.0% |
| !!! | TTTTCTTATTGTTAAATTAA+AGG | + | chr4_4:38911076-38911095 | Msa0680100:intron | 10.0% |
| !! | TTTCTTATTGTTAAATTAAA+GGG | + | chr4_4:38911077-38911096 | Msa0680100:intron | 10.0% |
| !! | GTATTAAATTAAAATTATAC+AGG | - | chr4_4:38911456-38911475 | None:intergenic | 10.0% |
| !!! | ATAAAAAAGCAAAATAATTT+TGG | - | chr4_4:38915028-38915047 | None:intergenic | 10.0% |
| !!! | ATTACAGTAAATTTTAAAAA+TGG | - | chr4_4:38915278-38915297 | None:intergenic | 10.0% |
| !! | AAAAAGTAAAATTAAAATAG+AGG | - | chr4_4:38916473-38916492 | None:intergenic | 10.0% |
| !!! | TTTTGTTCATTTATAAGAAA+GGG | - | chr4_4:38908849-38908868 | None:intergenic | 15.0% |
| !!! | TTTTTGTTCATTTATAAGAA+AGG | - | chr4_4:38908850-38908869 | None:intergenic | 15.0% |
| !!! | GAAAAATTTGAAATTCAAAA+TGG | + | chr4_4:38909149-38909168 | Msa0680100:intron | 15.0% |
| !! | ATATATGTATTAAGATGAAA+AGG | - | chr4_4:38909979-38909998 | None:intergenic | 15.0% |
| !! | AAATGATAAGAAGTTTAAAA+TGG | + | chr4_4:38915807-38915826 | Msa0680100:intron | 15.0% |
| !! | TGACAAAAAAAGTGAAAAAT+TGG | - | chr4_4:38909126-38909145 | None:intergenic | 20.0% |
| !!! | TTTTTCACTTTTTTTGTCAA+AGG | + | chr4_4:38909127-38909146 | Msa0680100:intron | 20.0% |
| !! | TTATTCTTAAAAGTTGTTAC+GGG | - | chr4_4:38909268-38909287 | None:intergenic | 20.0% |
| !! | CTTATTCTTAAAAGTTGTTA+CGG | - | chr4_4:38909269-38909288 | None:intergenic | 20.0% |
| !!! | GTAACAACTTTTAAGAATAA+GGG | + | chr4_4:38909268-38909287 | Msa0680100:intron | 20.0% |
| !! | AATAGATTGAATTAACTGAA+TGG | - | chr4_4:38909627-38909646 | None:intergenic | 20.0% |
| !! | TCCTGAAAATATTATAGTAT+TGG | + | chr4_4:38910089-38910108 | Msa0680100:CDS | 20.0% |
| !! | CCTGAAAATATTATAGTATT+GGG | + | chr4_4:38910090-38910109 | Msa0680100:CDS | 20.0% |
| !! | CTGAAAATATTATAGTATTG+GGG | + | chr4_4:38910091-38910110 | Msa0680100:CDS | 20.0% |
| !!! | TGAAAATATTATAGTATTGG+GGG | + | chr4_4:38910092-38910111 | Msa0680100:CDS | 20.0% |
| !!! | TTTTGAATTCAACTATAACA+TGG | - | chr4_4:38910342-38910361 | None:intergenic | 20.0% |
| !! | CTAATTAGCATAACTTATTA+AGG | + | chr4_4:38910449-38910468 | Msa0680100:intron | 20.0% |
| !!! | TTTAATTTAATACTGATTGC+AGG | + | chr4_4:38911463-38911482 | Msa0680100:intron | 20.0% |
| !! | AAAATTTACCTTAATGACAT+CGG | - | chr4_4:38911672-38911691 | None:intergenic | 20.0% |
| !!! | CAGATTTTAATTGTCTAAAT+AGG | + | chr4_4:38911962-38911981 | Msa0680100:intron | 20.0% |
| !! | TCGAATGTAAATTAACATAT+TGG | + | chr4_4:38912066-38912085 | Msa0680100:intron | 20.0% |
| !! | TTACACCTATATATACTAAT+AGG | - | chr4_4:38912174-38912193 | None:intergenic | 20.0% |
| !! | AGAAAGAAAATGAAAAAAGA+AGG | - | chr4_4:38912382-38912401 | None:intergenic | 20.0% |
| !! | TTACACCTATATATACTAAT+AGG | - | chr4_4:38912174-38912193 | None:intergenic | 20.0% |
| !!! | CTTTTGATGAAAATAGTAAA+GGG | + | chr4_4:38915070-38915089 | Msa0680100:intron | 20.0% |
| !!! | TTTTGATGAAAATAGTAAAG+GGG | + | chr4_4:38915071-38915090 | Msa0680100:intron | 20.0% |
| !!! | AATTTTAAAAATGGAAGGTA+CGG | - | chr4_4:38915269-38915288 | None:intergenic | 20.0% |
| !!! | CAGTAAATTTTAAAAATGGA+AGG | - | chr4_4:38915274-38915293 | None:intergenic | 20.0% |
| !! | TTAAAATGGAAATTTCATCT+TGG | + | chr4_4:38915821-38915840 | Msa0680100:intron | 20.0% |
| !!! | TCAATAGATACTACATTTTA+GGG | - | chr4_4:38915964-38915983 | None:intergenic | 20.0% |
| !!! | ATCAATAGATACTACATTTT+AGG | - | chr4_4:38915965-38915984 | None:intergenic | 20.0% |
| !! | AACATATCAATATGTTTAGT+TGG | + | chr4_4:38916060-38916079 | Msa0680100:intron | 20.0% |
| !!! | ATACTCTAACATATTCTTTT+CGG | - | chr4_4:38916427-38916446 | None:intergenic | 20.0% |
| ! | AACAATGTTCAATTCATCTT+TGG | - | chr4_4:38908819-38908838 | None:intergenic | 25.0% |
| ! | TCATTTATAAGAAAGGGAAA+AGG | - | chr4_4:38908843-38908862 | None:intergenic | 25.0% |
| ! | CAAAAAAAGTGAAAAATTGG+TGG | - | chr4_4:38909123-38909142 | None:intergenic | 25.0% |
| !! | ATTTGAAATTCAAAATGGCA+TGG | + | chr4_4:38909154-38909173 | Msa0680100:intron | 25.0% |
| ! | AATTAATGCAGCAAAATTAG+AGG | + | chr4_4:38909215-38909234 | Msa0680100:intron | 25.0% |
| ! | AAAATTAGAGGCAAAATTGT+AGG | + | chr4_4:38909227-38909246 | Msa0680100:intron | 25.0% |
| ! | AAATTAGAGGCAAAATTGTA+GGG | + | chr4_4:38909228-38909247 | Msa0680100:intron | 25.0% |
| !!! | CGTAACAACTTTTAAGAATA+AGG | + | chr4_4:38909267-38909286 | Msa0680100:intron | 25.0% |
| ! | TTCATAATTTCGCATTCTTA+AGG | + | chr4_4:38909750-38909769 | Msa0680100:intron | 25.0% |
| ! | GTCCATGAAATTAGAAAATT+CGG | + | chr4_4:38909821-38909840 | Msa0680100:CDS | 25.0% |
| !! | TACCGAATTTTCTAATTTCA+TGG | - | chr4_4:38909826-38909845 | None:intergenic | 25.0% |
| ! | ATTAGAAAATTCGGTAATCA+AGG | + | chr4_4:38909830-38909849 | Msa0680100:CDS | 25.0% |
| !! | CCCAATACTATAATATTTTC+AGG | - | chr4_4:38910093-38910112 | None:intergenic | 25.0% |
| !! | GAAAATATTATAGTATTGGG+GGG | + | chr4_4:38910093-38910112 | Msa0680100:CDS | 25.0% |
| !! | ATCAACTAATCTAGAACATA+AGG | - | chr4_4:38910196-38910215 | None:intergenic | 25.0% |
| ! | GTCTAAATTCTGAATTTATC+AGG | + | chr4_4:38910253-38910272 | Msa0680100:intron | 25.0% |
| !!! | AATGAATTTAGTTCTGATCT+AGG | + | chr4_4:38910280-38910299 | Msa0680100:intron | 25.0% |
| ! | CTTTATGTTATGAAGAAGTT+TGG | + | chr4_4:38910370-38910389 | Msa0680100:intron | 25.0% |
| ! | ATAGAAGAATCATTTCACAT+GGG | - | chr4_4:38910423-38910442 | None:intergenic | 25.0% |
| ! | AATAGAAGAATCATTTCACA+TGG | - | chr4_4:38910424-38910443 | None:intergenic | 25.0% |
| !! | AACTTATTAAGGATGTTTTG+TGG | + | chr4_4:38910460-38910479 | Msa0680100:intron | 25.0% |
| ! | TAACCATGTAAGTAAACAAA+TGG | - | chr4_4:38910753-38910772 | None:intergenic | 25.0% |
| ! | TGTTTACTTACATGGTTATT+TGG | + | chr4_4:38910755-38910774 | Msa0680100:intron | 25.0% |
| ! | AGATTTGAACAAATCAAACA+TGG | - | chr4_4:38910806-38910825 | None:intergenic | 25.0% |
| ! | CATTGTAGATTTCTTAAACA+TGG | - | chr4_4:38910829-38910848 | None:intergenic | 25.0% |
| ! | TTAAGAAATCTACAATGTGT+TGG | + | chr4_4:38910832-38910851 | Msa0680100:intron | 25.0% |
| ! | TAAGAAATCTACAATGTGTT+GGG | + | chr4_4:38910833-38910852 | Msa0680100:intron | 25.0% |
| !! | ATTGATTACACTTTTCTGAA+TGG | + | chr4_4:38910865-38910884 | Msa0680100:intron | 25.0% |
| ! | TAAAATGGTTTCTATTCGAT+GGG | - | chr4_4:38911025-38911044 | None:intergenic | 25.0% |
| ! | TTAAAATGGTTTCTATTCGA+TGG | - | chr4_4:38911026-38911045 | None:intergenic | 25.0% |
| ! | ACAATAAGAAAAGGGAAAAA+AGG | - | chr4_4:38911068-38911087 | None:intergenic | 25.0% |
| ! | TAAACAGAGATGGAAATTAA+AGG | - | chr4_4:38911412-38911431 | None:intergenic | 25.0% |
| ! | AAATTATACAGGTCTCTATA+TGG | - | chr4_4:38911445-38911464 | None:intergenic | 25.0% |
| !! | TATGATCCAAATTTGAGATT+GGG | + | chr4_4:38911590-38911609 | Msa0680100:CDS | 25.0% |
| ! | AAATCTGAGTTAAATGACTT+TGG | - | chr4_4:38911949-38911968 | None:intergenic | 25.0% |
| !! | AAGAAGATAATGGTAATGAA+AGG | - | chr4_4:38912001-38912020 | None:intergenic | 25.0% |
| ! | ATAAAGAGCAAAGAAGATAA+TGG | - | chr4_4:38912011-38912030 | None:intergenic | 25.0% |
| ! | AACTATGTATCTCTAATAAC+TGG | - | chr4_4:38912136-38912155 | None:intergenic | 25.0% |
| ! | ATTAGAGATACATAGTTACA+AGG | + | chr4_4:38912139-38912158 | Msa0680100:intron | 25.0% |
| ! | CTAGTCCTATTAGTATATAT+AGG | + | chr4_4:38912166-38912185 | Msa0680100:intron | 25.0% |
| ! | TTGTGAATTCTTTCTATTGA+TGG | - | chr4_4:38912244-38912263 | None:intergenic | 25.0% |
| !! | ATTATTTTCCCCTAAATTCT+AGG | + | chr4_4:38912594-38912613 | Msa0680100:intron | 25.0% |
| !!! | TTTTCAGTTTGATTTGGTTT+TGG | + | chr4_4:38912867-38912886 | Msa0680100:intron | 25.0% |
| !!! | ATACATTTTTGAAACTTGGT+TGG | + | chr4_4:38913434-38913453 | Msa0680100:intron | 25.0% |
| ! | CAGAATTACAATTCTACATA+AGG | - | chr4_4:38913556-38913575 | None:intergenic | 25.0% |
| ! | CTTATGTAGAATTGTAATTC+TGG | + | chr4_4:38913554-38913573 | Msa0680100:intron | 25.0% |
| ! | AATAGCCAGAAACAAATAAT+AGG | - | chr4_4:38913985-38914004 | None:intergenic | 25.0% |
| !!! | GACAATTGAAGACTATTTTT+TGG | + | chr4_4:38914007-38914026 | Msa0680100:intron | 25.0% |
| !!! | TGAAGACTATTTTTTGGATT+TGG | + | chr4_4:38914013-38914032 | Msa0680100:intron | 25.0% |
| !! | ATTTGGTTTAGCTTCATTAT+TGG | + | chr4_4:38914030-38914049 | Msa0680100:intron | 25.0% |
| !!! | TGGATATCATCATTGTTTTT+TGG | + | chr4_4:38914413-38914432 | Msa0680100:intron | 25.0% |
| ! | AATATCAACAAAGCCAATTA+AGG | - | chr4_4:38914509-38914528 | None:intergenic | 25.0% |
| ! | ACTTGAAATGAGAAAATACA+AGG | - | chr4_4:38914670-38914689 | None:intergenic | 25.0% |
| !!! | TGTATTTTCTCATTTCAAGT+TGG | + | chr4_4:38914670-38914689 | Msa0680100:intron | 25.0% |
| ! | ATTAGAGATACATAGTTACA+AGG | + | chr4_4:38912139-38912158 | Msa0680100:intron | 25.0% |
| ! | CTAGTCCTATTAGTATATAT+AGG | + | chr4_4:38912166-38912185 | Msa0680100:intron | 25.0% |
| ! | TTGTGAATTCTTTCTATTGA+TGG | - | chr4_4:38912244-38912263 | None:intergenic | 25.0% |
| !! | GCTTTTGATGAAAATAGTAA+AGG | + | chr4_4:38915069-38915088 | Msa0680100:intron | 25.0% |
| ! | TTTGATGAAAATAGTAAAGG+GGG | + | chr4_4:38915072-38915091 | Msa0680100:intron | 25.0% |
| !!! | ATTTTAAAAATGGAAGGTAC+GGG | - | chr4_4:38915268-38915287 | None:intergenic | 25.0% |
| ! | AAATTTACTGTAATACGTAC+CGG | + | chr4_4:38915284-38915303 | Msa0680100:intron | 25.0% |
| !!! | TGATTACTAATTTTTTGTGC+AGG | + | chr4_4:38915438-38915457 | Msa0680100:intron | 25.0% |
| !!! | ATTTTTTGTGCAGGATTTTA+AGG | + | chr4_4:38915447-38915466 | Msa0680100:intron | 25.0% |
| !!! | TTTTTTGTGCAGGATTTTAA+GGG | + | chr4_4:38915448-38915467 | Msa0680100:intron | 25.0% |
| !! | ACAATTGATAACTTTCATGT+AGG | - | chr4_4:38915890-38915909 | None:intergenic | 25.0% |
| ! | CTTGTTAAGGATTCAAAAAA+TGG | - | chr4_4:38915915-38915934 | None:intergenic | 25.0% |
| ! | TTCATCAAATATTACCACAA+GGG | - | chr4_4:38916202-38916221 | None:intergenic | 25.0% |
| ! | TTTCATCAAATATTACCACA+AGG | - | chr4_4:38916203-38916222 | None:intergenic | 25.0% |
| ! | GGTAATATTTGATGAAACAA+CGG | + | chr4_4:38916206-38916225 | Msa0680100:intron | 25.0% |
| !! | TGAAATTAGTTTCTTCACAT+TGG | - | chr4_4:38916259-38916278 | None:intergenic | 25.0% |
| ! | ATGTGAAGAAACTAATTTCA+TGG | + | chr4_4:38916259-38916278 | Msa0680100:intron | 25.0% |
| ! | AAGAAACTAATTTCATGGTT+TGG | + | chr4_4:38916264-38916283 | Msa0680100:intron | 25.0% |
| !! | AAGAATATGTTAGAGTATCT+AGG | + | chr4_4:38916429-38916448 | Msa0680100:intron | 25.0% |
| ! | TTTTGTGAGGCTATATTCAT+TGG | + | chr4_4:38908774-38908793 | Msa0680100:intron | 30.0% |
| GACATTGAAAACAGATGTTA+CGG | + | chr4_4:38909083-38909102 | Msa0680100:intron | 30.0% | |
| ATTCAAAATGGCATGGATTT+AGG | + | chr4_4:38909161-38909180 | Msa0680100:intron | 30.0% | |
| !!! | ATTTAGGAGGGAAGTTTTTT+AGG | + | chr4_4:38909177-38909196 | Msa0680100:intron | 30.0% |
| !!! | TTTAGGAGGGAAGTTTTTTA+GGG | + | chr4_4:38909178-38909197 | Msa0680100:intron | 30.0% |
| TGCTGCATTAATTGCTAATT+AGG | - | chr4_4:38909208-38909227 | None:intergenic | 30.0% | |
| AGTAGTAGTGTAGTAAATCA+TGG | - | chr4_4:38909699-38909718 | None:intergenic | 30.0% | |
| ATTTCGCATTCTTAAGGAAT+AGG | + | chr4_4:38909756-38909775 | Msa0680100:intron | 30.0% | |
| ACAAGTACCAATAGATTACT+CGG | - | chr4_4:38910020-38910039 | None:intergenic | 30.0% | |
| AGTAATCTATTGGTACTTGT+AGG | + | chr4_4:38910020-38910039 | Msa0680100:intron | 30.0% | |
| GGTCAAAATCTCTAATGTAA+CGG | + | chr4_4:38910041-38910060 | Msa0680100:intron | 30.0% | |
| TATGATGATCTCTTAACAGA+AGG | + | chr4_4:38910535-38910554 | Msa0680100:intron | 30.0% | |
| TGTCCATTTGTTTACTTACA+TGG | + | chr4_4:38910747-38910766 | Msa0680100:intron | 30.0% | |
| AAAATGGTTTCTATTCGATG+GGG | - | chr4_4:38911024-38911043 | None:intergenic | 30.0% | |
| !!! | TGGTTGGTTAGGTTTTAAAA+TGG | - | chr4_4:38911040-38911059 | None:intergenic | 30.0% |
| AAAAGGGAAAAAAGGTAGAA+TGG | - | chr4_4:38911060-38911079 | None:intergenic | 30.0% | |
| TAACGAATGTGAATCTATGT+TGG | + | chr4_4:38911119-38911138 | Msa0680100:intron | 30.0% | |
| ! | CTTCTTACCATATGTGTTTT+AGG | + | chr4_4:38911162-38911181 | Msa0680100:intron | 30.0% |
| !! | TTACCATATGTGTTTTAGGT+TGG | + | chr4_4:38911166-38911185 | Msa0680100:intron | 30.0% |
| AGATGAATTTGGGTATATGT+TGG | + | chr4_4:38911192-38911211 | Msa0680100:CDS | 30.0% | |
| CAAAATGATATTGATACGTC+TGG | + | chr4_4:38911229-38911248 | Msa0680100:CDS | 30.0% | |
| TTATAATGCCAGAACCATAT+TGG | + | chr4_4:38911264-38911283 | Msa0680100:CDS | 30.0% | |
| CAGGCTAAAATATTCCATTA+TGG | + | chr4_4:38911482-38911501 | Msa0680100:intron | 30.0% | |
| ! | GTATGATCCAAATTTGAGAT+TGG | + | chr4_4:38911589-38911608 | Msa0680100:CDS | 30.0% |
| ! | AAAGGGTATAATGAGCATAT+GGG | + | chr4_4:38911640-38911659 | Msa0680100:CDS | 30.0% |
| GAAAAAAGAATAACCTGCAA+TGG | - | chr4_4:38911738-38911757 | None:intergenic | 30.0% | |
| AATAACACTTCAGATAGACT+CGG | - | chr4_4:38911766-38911785 | None:intergenic | 30.0% | |
| CAATTAGAAGCTTGTGATTA+GGG | - | chr4_4:38911879-38911898 | None:intergenic | 30.0% | |
| ACAATTAGAAGCTTGTGATT+AGG | - | chr4_4:38911880-38911899 | None:intergenic | 30.0% | |
| ! | AGATAATGGTAATGAAAGGA+AGG | - | chr4_4:38911997-38912016 | None:intergenic | 30.0% |
| TGATACCATGTTATGAAACA+TGG | - | chr4_4:38912293-38912312 | None:intergenic | 30.0% | |
| ! | ATTTTCTCGAGAAAATGCAA+CGG | - | chr4_4:38912349-38912368 | None:intergenic | 30.0% |
| ! | TAGCGATTTTACTCCTAATT+CGG | + | chr4_4:38912556-38912575 | Msa0680100:intron | 30.0% |
| TGAAAACGAGCAAAGAATTA+GGG | - | chr4_4:38912853-38912872 | None:intergenic | 30.0% | |
| AAAACACACAGAAAACGAAT+CGG | - | chr4_4:38912951-38912970 | None:intergenic | 30.0% | |
| AATTCTGTTGTAGATATGAG+AGG | - | chr4_4:38913096-38913115 | None:intergenic | 30.0% | |
| AACATTTGATGTGCAATTGT+GGG | + | chr4_4:38913117-38913136 | Msa0680100:intron | 30.0% | |
| ! | TGTTTGTTAAAAGTCCTCAA+TGG | + | chr4_4:38913213-38913232 | Msa0680100:intron | 30.0% |
| TGTATCTCCAAACCAATAAT+TGG | - | chr4_4:38913419-38913438 | None:intergenic | 30.0% | |
| !!! | GGAGATACATTTTTGAAACT+TGG | + | chr4_4:38913430-38913449 | Msa0680100:intron | 30.0% |
| AACATAGATCAAAGTTCCAA+AGG | - | chr4_4:38913494-38913513 | None:intergenic | 30.0% | |
| ! | TTTGGAACTTTGATCTATGT+TGG | + | chr4_4:38913493-38913512 | Msa0680100:intron | 30.0% |
| ! | TCTATGTTGGTTATTGCTTA+TGG | + | chr4_4:38913506-38913525 | Msa0680100:intron | 30.0% |
| GCAATTTCAACATATCTTGT+TGG | + | chr4_4:38913583-38913602 | Msa0680100:intron | 30.0% | |
| !! | TTTTTAGCCATCTATCATTG+TGG | + | chr4_4:38913620-38913639 | Msa0680100:intron | 30.0% |
| ATGTAGAACGCATAAAAGAA+GGG | - | chr4_4:38913807-38913826 | None:intergenic | 30.0% | |
| !! | TTGGATTGATTACTTTTCCA+TGG | + | chr4_4:38913902-38913921 | Msa0680100:intron | 30.0% |
| TTTGGCCTATTATTTGTTTC+TGG | + | chr4_4:38913977-38913996 | Msa0680100:intron | 30.0% | |
| !!! | ATTATTGGAAGCATTGGTTT+TGG | + | chr4_4:38914045-38914064 | Msa0680100:intron | 30.0% |
| !! | CAACATGGATTTGTTTTCTA+TGG | + | chr4_4:38914086-38914105 | Msa0680100:intron | 30.0% |
| !! | TTGTTGATATTGACTTCTAC+CGG | + | chr4_4:38914518-38914537 | Msa0680100:intron | 30.0% |
| AAGTAAAAATGGGTATGGTT+TGG | - | chr4_4:38914952-38914971 | None:intergenic | 30.0% | |
| !! | AAACCATACCCATTTTTACT+TGG | + | chr4_4:38914951-38914970 | Msa0680100:intron | 30.0% |
| CGAAACAACCAAGTAAAAAT+GGG | - | chr4_4:38914962-38914981 | None:intergenic | 30.0% | |
| TAAGCATGTTCTTACAACAA+TGG | + | chr4_4:38915187-38915206 | Msa0680100:intron | 30.0% | |
| TAGGTTGTAAAACTTATGCA+AGG | + | chr4_4:38915348-38915367 | Msa0680100:intron | 30.0% | |
| !! | TTGATGATGCATTTGTTAGT+GGG | + | chr4_4:38915515-38915534 | Msa0680100:CDS | 30.0% |
| GAATTACCTGGAAAATACTT+GGG | - | chr4_4:38915564-38915583 | None:intergenic | 30.0% | |
| TGAATTACCTGGAAAATACT+TGG | - | chr4_4:38915565-38915584 | None:intergenic | 30.0% | |
| GTAAAGATATCTGAATTACC+TGG | - | chr4_4:38915576-38915595 | None:intergenic | 30.0% | |
| AGAAAAAAGTTGTGAGTGTT+TGG | + | chr4_4:38915615-38915634 | Msa0680100:intron | 30.0% | |
| !! | GTTGATGAAGTTATTTTGTG+TGG | + | chr4_4:38915639-38915658 | Msa0680100:intron | 30.0% |
| ATCGGCTGTTATAAAATGTA+GGG | + | chr4_4:38915784-38915803 | Msa0680100:intron | 30.0% | |
| TTAACCTTCTGACTTTGTTA+TGG | + | chr4_4:38915994-38916013 | Msa0680100:intron | 30.0% | |
| ACAACTAGCATAATCAAAAG+GGG | - | chr4_4:38916089-38916108 | None:intergenic | 30.0% | |
| GACAACTAGCATAATCAAAA+GGG | - | chr4_4:38916090-38916109 | None:intergenic | 30.0% | |
| GAAGAAGATAACACAATACT+TGG | - | chr4_4:38916167-38916186 | None:intergenic | 30.0% | |
| ! | ACTAATTTCATGGTTTGGAT+AGG | + | chr4_4:38916269-38916288 | Msa0680100:intron | 30.0% |
| ! | CAATTTTATCACAGAAGATG+AGG | - | chr4_4:38916383-38916402 | None:intergenic | 30.0% |
| CTTGCTTCTTCTAACATATG+TGG | - | chr4_4:38908737-38908756 | None:intergenic | 35.0% | |
| TAGAAGAAGCAAGTATCTAG+AGG | + | chr4_4:38908744-38908763 | Msa0680100:intron | 35.0% | |
| TCATTGGAAGTCAAATACGA+TGG | + | chr4_4:38908790-38908809 | Msa0680100:intron | 35.0% | |
| GTTCTCAAACAACAACAACA+AGG | - | chr4_4:38908877-38908896 | None:intergenic | 35.0% | |
| AGAGATGGAAAAGGAACTAT+TGG | + | chr4_4:38909026-38909045 | Msa0680100:intron | 35.0% | |
| GAGATGGAAAAGGAACTATT+GGG | + | chr4_4:38909027-38909046 | Msa0680100:intron | 35.0% | |
| AAAATGGCATGGATTTAGGA+GGG | + | chr4_4:38909165-38909184 | Msa0680100:intron | 35.0% | |
| GAGAAGAGAAGGATTATTCA+CGG | + | chr4_4:38909299-38909318 | Msa0680100:intron | 35.0% | |
| ! | TTTGAAATGAATCCCAGAGT+TGG | - | chr4_4:38909454-38909473 | None:intergenic | 35.0% |
| AGACTATGATGTCTCCAAAA+TGG | + | chr4_4:38909475-38909494 | Msa0680100:CDS | 35.0% | |
| TTGTGCACATGTTCATTAAG+AGG | - | chr4_4:38909566-38909585 | None:intergenic | 35.0% | |
| GAACCTACCTGTAATATGAA+GGG | - | chr4_4:38909605-38909624 | None:intergenic | 35.0% | |
| CTGATATAGATCAAATGCAC+TGG | + | chr4_4:38909795-38909814 | Msa0680100:intron | 35.0% | |
| TTTGACTGTTTGAACACCAT+CGG | - | chr4_4:38909873-38909892 | None:intergenic | 35.0% | |
| AACGAAGAAACCTTTAATCC+AGG | - | chr4_4:38909944-38909963 | None:intergenic | 35.0% | |
| AAGATGAAAAGGATGTCTAG+TGG | - | chr4_4:38909968-38909987 | None:intergenic | 35.0% | |
| ATTCTCTCCGAGTAATCTAT+TGG | + | chr4_4:38910010-38910029 | Msa0680100:intron | 35.0% | |
| ! | AATATTATAGTATTGGGGGG+TGG | + | chr4_4:38910096-38910115 | Msa0680100:CDS | 35.0% |
| TAGAACATAAGGACTTACCT+AGG | - | chr4_4:38910185-38910204 | None:intergenic | 35.0% | |
| TTCTGATCTAGGTTATGAAC+TGG | + | chr4_4:38910291-38910310 | Msa0680100:intron | 35.0% | |
| !! | TTATGAACTGGTTTGTCTCA+TGG | + | chr4_4:38910303-38910322 | Msa0680100:intron | 35.0% |
| ! | GTGAAACGTTGATAGATTTC+CGG | + | chr4_4:38910593-38910612 | Msa0680100:CDS | 35.0% |
| TTCATCTGCAGTTATAAGCA+AGG | + | chr4_4:38910714-38910733 | Msa0680100:CDS | 35.0% | |
| TGGTTTCCTGTTACTATCTA+CGG | + | chr4_4:38910775-38910794 | Msa0680100:intron | 35.0% | |
| GAATGCAACATTGTCATGTT+TGG | + | chr4_4:38910944-38910963 | Msa0680100:intron | 35.0% | |
| GTTAAAGTTCGTGCATTTCA+AGG | + | chr4_4:38910966-38910985 | Msa0680100:intron | 35.0% | |
| ! | AAAAGGTAGAATGGTTGGTT+AGG | - | chr4_4:38911051-38911070 | None:intergenic | 35.0% |
| !! | CATATGATCTCTAGGATTTC+GGG | - | chr4_4:38911344-38911363 | None:intergenic | 35.0% |
| !! | GCATATGATCTCTAGGATTT+CGG | - | chr4_4:38911345-38911364 | None:intergenic | 35.0% |
| TGATCATAACCTCATCAAGA+AGG | + | chr4_4:38911384-38911403 | Msa0680100:CDS | 35.0% | |
| CCACAGTTTATAAACAGAGA+TGG | - | chr4_4:38911422-38911441 | None:intergenic | 35.0% | |
| CCATCTCTGTTTATAAACTG+TGG | + | chr4_4:38911419-38911438 | Msa0680100:intron | 35.0% | |
| TCAAACTGATGGAACCATAA+TGG | - | chr4_4:38911499-38911518 | None:intergenic | 35.0% | |
| CATAGTCCCAATCTCAAATT+TGG | - | chr4_4:38911599-38911618 | None:intergenic | 35.0% | |
| ! | CAAATTTGAGATTGGGACTA+TGG | + | chr4_4:38911597-38911616 | Msa0680100:CDS | 35.0% |
| ! | GAAAGGGTATAATGAGCATA+TGG | + | chr4_4:38911639-38911658 | Msa0680100:CDS | 35.0% |
| CACTTTATAAATGCCATTGC+AGG | + | chr4_4:38911722-38911741 | Msa0680100:intron | 35.0% | |
| AATACAGCATCATCATCATG+AGG | - | chr4_4:38911841-38911860 | None:intergenic | 35.0% | |
| AAGCTTCTAATTGTCACTGA+AGG | + | chr4_4:38911886-38911905 | Msa0680100:CDS | 35.0% | |
| AGCTTCTAATTGTCACTGAA+GGG | + | chr4_4:38911887-38911906 | Msa0680100:CDS | 35.0% | |
| TGACTTTGGTAAGCTTACAT+TGG | - | chr4_4:38911935-38911954 | None:intergenic | 35.0% | |
| AGAAAGTTAACCCACTTATG+GGG | - | chr4_4:38912200-38912219 | None:intergenic | 35.0% | |
| GAGAAAGTTAACCCACTTAT+GGG | - | chr4_4:38912201-38912220 | None:intergenic | 35.0% | |
| TGAGAAAGTTAACCCACTTA+TGG | - | chr4_4:38912202-38912221 | None:intergenic | 35.0% | |
| ACATGGTATCAGAGCAAATT+TGG | + | chr4_4:38912302-38912321 | Msa0680100:intron | 35.0% | |
| AAATTTGGTATCCTCCTTGA+AGG | + | chr4_4:38912317-38912336 | Msa0680100:intron | 35.0% | |
| AACGCGAAACCTAGAATTTA+GGG | - | chr4_4:38912606-38912625 | None:intergenic | 35.0% | |
| AAACGCGAAACCTAGAATTT+AGG | - | chr4_4:38912607-38912626 | None:intergenic | 35.0% | |
| CACATGAAATTAGACTGACA+AGG | - | chr4_4:38912642-38912661 | None:intergenic | 35.0% | |
| GAATTGCGAAAACACAAAAC+AGG | - | chr4_4:38912692-38912711 | None:intergenic | 35.0% | |
| ! | CGCAATTCAGTTTCGATTTT+CGG | + | chr4_4:38912704-38912723 | Msa0680100:intron | 35.0% |
| CTGAAAACGAGCAAAGAATT+AGG | - | chr4_4:38912854-38912873 | None:intergenic | 35.0% | |
| ! | TGCTCGTTTTCAGTTTGATT+TGG | + | chr4_4:38912861-38912880 | Msa0680100:intron | 35.0% |
| GATTCGATTACCTTCTTTCT+CGG | + | chr4_4:38913032-38913051 | Msa0680100:intron | 35.0% | |
| CAACATTTGATGTGCAATTG+TGG | + | chr4_4:38913116-38913135 | Msa0680100:intron | 35.0% | |
| AAGGTTCTCTATGATGTGTT+TGG | + | chr4_4:38913165-38913184 | Msa0680100:intron | 35.0% | |
| ! | AGGACTTTTAACAAACACCT+TGG | - | chr4_4:38913210-38913229 | None:intergenic | 35.0% |
| AACCAATAAGTCTTCCATTG+AGG | - | chr4_4:38913230-38913249 | None:intergenic | 35.0% | |
| TCAGAAGTTATTTGTTCAGC+TGG | + | chr4_4:38913255-38913274 | Msa0680100:intron | 35.0% | |
| TTGAGAAACCAATGCACTAA+AGG | - | chr4_4:38913322-38913341 | None:intergenic | 35.0% | |
| !! | AGTGCATTGGTTTCTCAATT+TGG | + | chr4_4:38913324-38913343 | Msa0680100:intron | 35.0% |
| TCAGCATATACACAACCAAA+GGG | - | chr4_4:38913362-38913381 | None:intergenic | 35.0% | |
| ! | ACTTGTGGATTGCCAATTAT+TGG | + | chr4_4:38913404-38913423 | Msa0680100:intron | 35.0% |
| ! | TGGATTGCCAATTATTGGTT+TGG | + | chr4_4:38913409-38913428 | Msa0680100:intron | 35.0% |
| TACTCTCTTATACACACCTT+TGG | + | chr4_4:38913475-38913494 | Msa0680100:intron | 35.0% | |
| GAACTTAGATGCTGAATACA+TGG | + | chr4_4:38913530-38913549 | Msa0680100:intron | 35.0% | |
| !! | ATCTCTTGAAAAAGTGCCTT+AGG | - | chr4_4:38913647-38913666 | None:intergenic | 35.0% |
| GTGTATGGTGTAAGATTGAA+TGG | + | chr4_4:38913676-38913695 | Msa0680100:intron | 35.0% | |
| CATAGACTTAAGGCGTATAA+GGG | - | chr4_4:38913718-38913737 | None:intergenic | 35.0% | |
| ACATAGACTTAAGGCGTATA+AGG | - | chr4_4:38913719-38913738 | None:intergenic | 35.0% | |
| TTATACGCCTTAAGTCTATG+TGG | + | chr4_4:38913718-38913737 | Msa0680100:intron | 35.0% | |
| AAGAAAGCCACATAGACTTA+AGG | - | chr4_4:38913728-38913747 | None:intergenic | 35.0% | |
| !!! | GGCAGATTGTACTAGTTTTT+TGG | + | chr4_4:38913758-38913777 | Msa0680100:intron | 35.0% |
| CATGTAGAACGCATAAAAGA+AGG | - | chr4_4:38913808-38913827 | None:intergenic | 35.0% | |
| ! | CTTCTTTTATGCGTTCTACA+TGG | + | chr4_4:38913806-38913825 | Msa0680100:intron | 35.0% |
| TTTGGTGAGGTTTATGATTC+TGG | + | chr4_4:38913853-38913872 | Msa0680100:intron | 35.0% | |
| !!! | TTATGATTCTGGCTCAGTTT+TGG | + | chr4_4:38913864-38913883 | Msa0680100:intron | 35.0% |
| TTGGATTGTTGGAAGATTCT+TGG | + | chr4_4:38913883-38913902 | Msa0680100:intron | 35.0% | |
| ! | AGCTTCATTATTGGAAGCAT+TGG | + | chr4_4:38914039-38914058 | Msa0680100:intron | 35.0% |
| TGTTGATGCATTCAAACCAT+AGG | - | chr4_4:38914071-38914090 | None:intergenic | 35.0% | |
| ATGGTTTGAATGCATCAACA+TGG | + | chr4_4:38914071-38914090 | Msa0680100:intron | 35.0% | |
| !! | CACTTTTATCTTTGGAAGCT+TGG | + | chr4_4:38914190-38914209 | Msa0680100:intron | 35.0% |
| TGAACAAACTTCACACCAAA+AGG | - | chr4_4:38914233-38914252 | None:intergenic | 35.0% | |
| GACAAGAAAAACCAAATGCA+AGG | - | chr4_4:38914292-38914311 | None:intergenic | 35.0% | |
| !!! | GCATTTGGTTTTTCTTGTCT+CGG | + | chr4_4:38914293-38914312 | Msa0680100:intron | 35.0% |
| CAAGGTTCCAAAGATAAAAG+TGG | - | chr4_4:38914337-38914356 | None:intergenic | 35.0% | |
| !!! | CACTTTTATCTTTGGAACCT+TGG | + | chr4_4:38914335-38914354 | Msa0680100:intron | 35.0% |
| ! | GATATCCAAAAAGAAGTGCA+AGG | - | chr4_4:38914401-38914420 | None:intergenic | 35.0% |
| AGCACAAGACAAGAAATACA+AGG | - | chr4_4:38914443-38914462 | None:intergenic | 35.0% | |
| TGGATGCTTATTCCTTCAAT+TGG | + | chr4_4:38914560-38914579 | Msa0680100:intron | 35.0% | |
| !!! | TTTTTTAGCCGATGTATTCC+CGG | + | chr4_4:38914637-38914656 | Msa0680100:intron | 35.0% |
| AAAATACAAGGAAAGATGCC+GGG | - | chr4_4:38914658-38914677 | None:intergenic | 35.0% | |
| GAAAATACAAGGAAAGATGC+CGG | - | chr4_4:38914659-38914678 | None:intergenic | 35.0% | |
| TTTGAATACCTTCCAACTTG+AGG | + | chr4_4:38914699-38914718 | Msa0680100:intron | 35.0% | |
| TTGAATACCTTCCAACTTGA+GGG | + | chr4_4:38914700-38914719 | Msa0680100:intron | 35.0% | |
| AGAAAGTTAACCCACTTATG+GGG | - | chr4_4:38912200-38912219 | None:intergenic | 35.0% | |
| GAGAAAGTTAACCCACTTAT+GGG | - | chr4_4:38912201-38912220 | None:intergenic | 35.0% | |
| TGAGAAAGTTAACCCACTTA+TGG | - | chr4_4:38912202-38912221 | None:intergenic | 35.0% | |
| !! | AAAATGGGTATGGTTTGGTA+CGG | - | chr4_4:38914947-38914966 | None:intergenic | 35.0% |
| CAACCAAGTAAAAATGGGTA+TGG | - | chr4_4:38914957-38914976 | None:intergenic | 35.0% | |
| GCGAAACAACCAAGTAAAAA+TGG | - | chr4_4:38914963-38914982 | None:intergenic | 35.0% | |
| !! | GTTGATGATGCATTTGTTAG+TGG | + | chr4_4:38915514-38915533 | Msa0680100:CDS | 35.0% |
| !! | ATGAAGTTATTTTGTGTGGC+AGG | + | chr4_4:38915643-38915662 | Msa0680100:intron | 35.0% |
| !! | TTATTTTGTGTGGCAGGATA+AGG | + | chr4_4:38915649-38915668 | Msa0680100:intron | 35.0% |
| CTGATGCAATATAGGAACAT+CGG | + | chr4_4:38915766-38915785 | Msa0680100:intron | 35.0% | |
| ! | CATCGGCTGTTATAAAATGT+AGG | + | chr4_4:38915783-38915802 | Msa0680100:intron | 35.0% |
| AGTCATGTACTGCAAAATTC+AGG | + | chr4_4:38916033-38916052 | Msa0680100:intron | 35.0% | |
| CGACAACTAGCATAATCAAA+AGG | - | chr4_4:38916091-38916110 | None:intergenic | 35.0% | |
| TGAGTGATAGAATTCCACTT+TGG | + | chr4_4:38916314-38916333 | Msa0680100:intron | 35.0% | |
| GAGTGATAGAATTCCACTTT+GGG | + | chr4_4:38916315-38916334 | Msa0680100:intron | 35.0% | |
| ATTGATGTACAATCCCAAAG+TGG | - | chr4_4:38916331-38916350 | None:intergenic | 35.0% | |
| TTGGGATTGTACATCAATCA+AGG | + | chr4_4:38916333-38916352 | Msa0680100:intron | 35.0% | |
| TGGGATTGTACATCAATCAA+GGG | + | chr4_4:38916334-38916353 | Msa0680100:intron | 35.0% | |
| ATTGTACATCAATCAAGGGA+GGG | + | chr4_4:38916338-38916357 | Msa0680100:intron | 35.0% | |
| TCTAGGTCAAATACATCATG+TGG | + | chr4_4:38916446-38916465 | Msa0680100:intron | 35.0% | |
| GCTTCCAATTGCCTTTAGTT+CGG | + | chr4_4:38908695-38908714 | Msa0680100:CDS | 40.0% | |
| CTTACCGAACTAAAGGCAAT+TGG | - | chr4_4:38908702-38908721 | None:intergenic | 40.0% | |
| ! | CAATTGCCTTTAGTTCGGTA+AGG | + | chr4_4:38908700-38908719 | Msa0680100:intron | 40.0% |
| GCTAATCCTTACCGAACTAA+AGG | - | chr4_4:38908709-38908728 | None:intergenic | 40.0% | |
| AGAAGCAAGTATCTAGAGGA+AGG | + | chr4_4:38908748-38908767 | Msa0680100:intron | 40.0% | |
| ! | TAGAGGAAGGTGATTTTGTG+AGG | + | chr4_4:38908761-38908780 | Msa0680100:intron | 40.0% |
| !! | GTTGATAGCTCTATAGGTGA+TGG | + | chr4_4:38908918-38908937 | Msa0680100:intron | 40.0% |
| AGGTTGTCGATGTGATGAAA+GGG | + | chr4_4:38908956-38908975 | Msa0680100:intron | 40.0% | |
| TCGATGTGATGAAAGGGAAA+AGG | + | chr4_4:38908962-38908981 | Msa0680100:intron | 40.0% | |
| TGATGAAAGGGAAAAGGCAA+AGG | + | chr4_4:38908968-38908987 | Msa0680100:intron | 40.0% | |
| GAGATAGAGAGAGATGGAAA+AGG | + | chr4_4:38909017-38909036 | Msa0680100:intron | 40.0% | |
| CAAAATGGCATGGATTTAGG+AGG | + | chr4_4:38909164-38909183 | Msa0680100:intron | 40.0% | |
| GGGATATAAGAGAGAAGAGA+AGG | + | chr4_4:38909288-38909307 | Msa0680100:intron | 40.0% | |
| AGAGAAGGATTATTCACGGA+AGG | + | chr4_4:38909303-38909322 | Msa0680100:intron | 40.0% | |
| GAGAAGGATTATTCACGGAA+GGG | + | chr4_4:38909304-38909323 | Msa0680100:intron | 40.0% | |
| GAAAACATGACAGGGAAAAG+AGG | + | chr4_4:38909326-38909345 | Msa0680100:intron | 40.0% | |
| GGAAAAGAGGCAAAAGCAAA+AGG | + | chr4_4:38909339-38909358 | Msa0680100:intron | 40.0% | |
| TTTCAAAAGCTCATGGGTGA+CGG | - | chr4_4:38909387-38909406 | None:intergenic | 40.0% | |
| !!! | ACCCATGAGCTTTTGAAACT+CGG | + | chr4_4:38909389-38909408 | Msa0680100:CDS | 40.0% |
| !! | GTTTGCTTTGAAGAGAGACA+AGG | + | chr4_4:38909412-38909431 | Msa0680100:CDS | 40.0% |
| ! | CAAACAGATTTGCGCCATTT+TGG | - | chr4_4:38909492-38909511 | None:intergenic | 40.0% |
| CAAAATGGCGCAAATCTGTT+TGG | + | chr4_4:38909490-38909509 | Msa0680100:CDS | 40.0% | |
| TCTTCCGATCTCAATTCTTG+TGG | + | chr4_4:38909524-38909543 | Msa0680100:CDS | 40.0% | |
| GGTACCACAAGAATTGAGAT+CGG | - | chr4_4:38909531-38909550 | None:intergenic | 40.0% | |
| GATCTCAATTCTTGTGGTAC+CGG | + | chr4_4:38909530-38909549 | Msa0680100:CDS | 40.0% | |
| TGCACATGTTCATTAAGAGG+AGG | - | chr4_4:38909563-38909582 | None:intergenic | 40.0% | |
| GGAACCTACCTGTAATATGA+AGG | - | chr4_4:38909606-38909625 | None:intergenic | 40.0% | |
| ! | TATAGATCAAATGCACTGGC+AGG | + | chr4_4:38909799-38909818 | Msa0680100:intron | 40.0% |
| !! | CATCGGTCATTTTGAACTTC+AGG | - | chr4_4:38909856-38909875 | None:intergenic | 40.0% |
| CTGAAGTTCAAAATGACCGA+TGG | + | chr4_4:38909854-38909873 | Msa0680100:CDS | 40.0% | |
| GATGGTGTTCAAACAGTCAA+AGG | + | chr4_4:38909872-38909891 | Msa0680100:CDS | 40.0% | |
| TCAAACAGTCAAAGGAGTAG+TGG | + | chr4_4:38909880-38909899 | Msa0680100:CDS | 40.0% | |
| CAAACATCAAGGTCAACAAC+AGG | - | chr4_4:38909914-38909933 | None:intergenic | 40.0% | |
| GAAGAAACCTTTAATCCAGG+AGG | - | chr4_4:38909941-38909960 | None:intergenic | 40.0% | |
| !!! | AGTGGACTGGTTGTTTGTTT+TGG | + | chr4_4:38910571-38910590 | Msa0680100:CDS | 40.0% |
| ATAGATTTCCGGCAAAGAGT+GGG | + | chr4_4:38910604-38910623 | Msa0680100:CDS | 40.0% | |
| TTTCTTGAAAGCAGGCACTT+CGG | - | chr4_4:38910644-38910663 | None:intergenic | 40.0% | |
| GAAAGAGCTTTCTTGAAAGC+AGG | - | chr4_4:38910652-38910671 | None:intergenic | 40.0% | |
| GCTTTCAAGAAAGCTCTTTC+TGG | + | chr4_4:38910652-38910671 | Msa0680100:CDS | 40.0% | |
| GGTTTCCTGTTACTATCTAC+GGG | + | chr4_4:38910776-38910795 | Msa0680100:intron | 40.0% | |
| GTTTCCTGTTACTATCTACG+GGG | + | chr4_4:38910777-38910796 | Msa0680100:intron | 40.0% | |
| GTATGTGTGTGTGTGTTTCA+AGG | + | chr4_4:38910887-38910906 | Msa0680100:intron | 40.0% | |
| !! | ATTCGCAAGCTCACTTTTCA+GGG | - | chr4_4:38910928-38910947 | None:intergenic | 40.0% |
| GGGAAAAAAGGTAGAATGGT+TGG | - | chr4_4:38911056-38911075 | None:intergenic | 40.0% | |
| TAAAGGGTCATGCTAACTTG+AGG | + | chr4_4:38911093-38911112 | Msa0680100:intron | 40.0% | |
| ! | ATGTGAATCTATGTTGGCTG+CGG | + | chr4_4:38911125-38911144 | Msa0680100:intron | 40.0% |
| GCTCCAACCTAAAACACATA+TGG | - | chr4_4:38911172-38911191 | None:intergenic | 40.0% | |
| ! | TAGGTTGGAGCAGATGAATT+TGG | + | chr4_4:38911181-38911200 | Msa0680100:intron | 40.0% |
| AGGTTGGAGCAGATGAATTT+GGG | + | chr4_4:38911182-38911201 | Msa0680100:intron | 40.0% | |
| ATATTGATACGTCTGGCATG+CGG | + | chr4_4:38911236-38911255 | Msa0680100:CDS | 40.0% | |
| AGCAAAAGCCAATATGGTTC+TGG | - | chr4_4:38911275-38911294 | None:intergenic | 40.0% | |
| AAGCGTAGCAAAAGCCAATA+TGG | - | chr4_4:38911281-38911300 | None:intergenic | 40.0% | |
| !!! | ATATTGGCTTTTGCTACGCT+TGG | + | chr4_4:38911280-38911299 | Msa0680100:CDS | 40.0% |
| TCCTAGAGATCATATGCTTC+TGG | + | chr4_4:38911348-38911367 | Msa0680100:CDS | 40.0% | |
| ! | TCCAGAAGCATATGATCTCT+AGG | - | chr4_4:38911352-38911371 | None:intergenic | 40.0% |
| !! | TTAAAGGCACCTTCTTGATG+AGG | - | chr4_4:38911396-38911415 | None:intergenic | 40.0% |
| TGGCTCATCAATCAAACTGA+TGG | - | chr4_4:38911510-38911529 | None:intergenic | 40.0% | |
| TTGAGGATTGCTAAAGAGTC+CGG | + | chr4_4:38911554-38911573 | Msa0680100:CDS | 40.0% | |
| ATCATACGAGAGAATGCAAC+CGG | - | chr4_4:38911576-38911595 | None:intergenic | 40.0% | |
| ! | TGATGATGATGCTGTATTCC+AGG | + | chr4_4:38911843-38911862 | Msa0680100:CDS | 40.0% |
| ATTGTCACTGAAGGGTCAAA+CGG | + | chr4_4:38911895-38911914 | Msa0680100:CDS | 40.0% | |
| TTGCTCTTTATCCTGATGAG+TGG | + | chr4_4:38912020-38912039 | Msa0680100:intron | 40.0% | |
| AACATTTCAGTCCACTCATC+AGG | - | chr4_4:38912034-38912053 | None:intergenic | 40.0% | |
| !! | TGATGAGTGGACTGAAATGT+TGG | + | chr4_4:38912033-38912052 | Msa0680100:intron | 40.0% |
| ACACCCAATGACGAATAGTA+GGG | + | chr4_4:38912089-38912108 | Msa0680100:intron | 40.0% | |
| GTACCCTACTATTCGTCATT+GGG | - | chr4_4:38912095-38912114 | None:intergenic | 40.0% | |
| AGTACCCTACTATTCGTCAT+TGG | - | chr4_4:38912096-38912115 | None:intergenic | 40.0% | |
| ! | ATAGTAGGGTACTCCAAACA+TGG | + | chr4_4:38912103-38912122 | Msa0680100:intron | 40.0% |
| AACTGGTACTTCTCCATGTT+TGG | - | chr4_4:38912119-38912138 | None:intergenic | 40.0% | |
| ! | GCTTTTCTCTCCTTCATCAA+TGG | + | chr4_4:38912264-38912283 | Msa0680100:intron | 40.0% |
| AACATGGCATCCATTGATGA+AGG | - | chr4_4:38912277-38912296 | None:intergenic | 40.0% | |
| GGATGCCATGTTTCATAACA+TGG | + | chr4_4:38912285-38912304 | Msa0680100:intron | 40.0% | |
| AACGGAAAAATCCTTCAAGG+AGG | - | chr4_4:38912331-38912350 | None:intergenic | 40.0% | |
| TGCAACGGAAAAATCCTTCA+AGG | - | chr4_4:38912334-38912353 | None:intergenic | 40.0% | |
| CCAGGATTATGCAGAAGAAA+AGG | - | chr4_4:38912460-38912479 | None:intergenic | 40.0% | |
| ! | CCTTTTCTTCTGCATAATCC+TGG | + | chr4_4:38912457-38912476 | Msa0680100:intron | 40.0% |
| CGAAAGAAAGAAAACGATCC+AGG | - | chr4_4:38912478-38912497 | None:intergenic | 40.0% | |
| GAACGAGATCTAACCGAATT+AGG | - | chr4_4:38912572-38912591 | None:intergenic | 40.0% | |
| ACGCGAAACCTAGAATTTAG+GGG | - | chr4_4:38912605-38912624 | None:intergenic | 40.0% | |
| ! | CTTCGTTCATCTTCCTGTTT+TGG | + | chr4_4:38912922-38912941 | Msa0680100:intron | 40.0% |
| AACGAATCGGAAACCAAAAC+AGG | - | chr4_4:38912938-38912957 | None:intergenic | 40.0% | |
| GCAATCTGAGTCTATTGTGT+TGG | + | chr4_4:38912997-38913016 | Msa0680100:intron | 40.0% | |
| ATGTCATATCATCGAGAGTG+TGG | - | chr4_4:38913058-38913077 | None:intergenic | 40.0% | |
| TATCAGGTTCACTGGAAGTT+TGG | + | chr4_4:38913140-38913159 | Msa0680100:intron | 40.0% | |
| GTTCACTGGAAGTTTGGTAA+AGG | + | chr4_4:38913146-38913165 | Msa0680100:intron | 40.0% | |
| CTTATTGCATCTTGCTTCCA+AGG | + | chr4_4:38913190-38913209 | Msa0680100:intron | 40.0% | |
| GTCCTCAATGGAAGACTTAT+TGG | + | chr4_4:38913225-38913244 | Msa0680100:intron | 40.0% | |
| GTCAGCATATACACAACCAA+AGG | - | chr4_4:38913363-38913382 | None:intergenic | 40.0% | |
| !! | TGTATATGCTGACTTACGAG+AGG | + | chr4_4:38913370-38913389 | Msa0680100:intron | 40.0% |
| ! | GAGGTATCTTCTTACACTTG+TGG | + | chr4_4:38913389-38913408 | Msa0680100:intron | 40.0% |
| ! | AACTTGGTTGGTGTATAGCA+TGG | + | chr4_4:38913446-38913465 | Msa0680100:intron | 40.0% |
| ! | ACTTGGTTGGTGTATAGCAT+GGG | + | chr4_4:38913447-38913466 | Msa0680100:intron | 40.0% |
| CTTAGGTCCACAATGATAGA+TGG | - | chr4_4:38913630-38913649 | None:intergenic | 40.0% | |
| CATCTATCATTGTGGACCTA+AGG | + | chr4_4:38913628-38913647 | Msa0680100:intron | 40.0% | |
| ! | GTGGCTTTCTTCATCAGTTT+TGG | + | chr4_4:38913737-38913756 | Msa0680100:intron | 40.0% |
| GGCAGATTGTCTTTAACACT+TGG | + | chr4_4:38913779-38913798 | Msa0680100:intron | 40.0% | |
| ! | ACATGGCATTTTCATGTCCT+TGG | + | chr4_4:38913823-38913842 | Msa0680100:intron | 40.0% |
| ! | GCATTTTCATGTCCTTGGTT+TGG | + | chr4_4:38913828-38913847 | Msa0680100:intron | 40.0% |
| !! | CATGTCCTTGGTTTGGTATT+TGG | + | chr4_4:38913835-38913854 | Msa0680100:intron | 40.0% |
| TTTCCATGGTTTCTTTGTCC+TGG | + | chr4_4:38913916-38913935 | Msa0680100:intron | 40.0% | |
| ! | CTTTCTGCAGCTTTGTGATT+TGG | + | chr4_4:38913959-38913978 | Msa0680100:intron | 40.0% |
| TGGTTTGAAGACACATCACA+TGG | + | chr4_4:38914106-38914125 | Msa0680100:intron | 40.0% | |
| ACATGGCTATGCATCTCTAT+TGG | + | chr4_4:38914123-38914142 | Msa0680100:intron | 40.0% | |
| !! | CATCTCTATTGGTTTGCCAT+TGG | + | chr4_4:38914134-38914153 | Msa0680100:intron | 40.0% |
| !!! | GCCATTGGTTTTTCTTGTCT+CGG | + | chr4_4:38914149-38914168 | Msa0680100:intron | 40.0% |
| !!! | GAGGGCATCACTTTTATCTT+TGG | + | chr4_4:38914182-38914201 | Msa0680100:intron | 40.0% |
| !!! | AGCTTGGTTTTGTTGCTTCA+TGG | + | chr4_4:38914206-38914225 | Msa0680100:intron | 40.0% |
| !! | TTGTTGCTTCATGGTCCTTT+TGG | + | chr4_4:38914215-38914234 | Msa0680100:intron | 40.0% |
| !!! | AAGGGCACCACTTTTATCTT+TGG | + | chr4_4:38914327-38914346 | Msa0680100:intron | 40.0% |
| ! | CTCTTCCTTGCACTTCTTTT+TGG | + | chr4_4:38914393-38914412 | Msa0680100:intron | 40.0% |
| GAGTGATTGAACACTCTTGA+TGG | + | chr4_4:38914471-38914490 | Msa0680100:intron | 40.0% | |
| ! | GTTAAGCGTTGTGCCTTAAT+TGG | + | chr4_4:38914493-38914512 | Msa0680100:intron | 40.0% |
| !! | TGATATTGACTTCTACCGGA+TGG | + | chr4_4:38914522-38914541 | Msa0680100:intron | 40.0% |
| CTCAAGGTTGAACCAATTGA+AGG | - | chr4_4:38914575-38914594 | None:intergenic | 40.0% | |
| ! | ATTGGTTCAACCTTGAGTTG+TGG | + | chr4_4:38914578-38914597 | Msa0680100:intron | 40.0% |
| TGAATACCTTCCAACTTGAG+GGG | + | chr4_4:38914701-38914720 | Msa0680100:intron | 40.0% | |
| AACATGGCATCCATTGATGA+AGG | - | chr4_4:38912277-38912296 | None:intergenic | 40.0% | |
| GATGCCATGTTTCATAACAC+CGG | + | chr4_4:38914875-38914894 | Msa0680100:intron | 40.0% | |
| ATGTTTCATAACACCGGTAC+CGG | + | chr4_4:38914881-38914900 | Msa0680100:intron | 40.0% | |
| GTTGATGCAGCAAAAACACA+CGG | + | chr4_4:38914987-38915006 | Msa0680100:intron | 40.0% | |
| TTGATGCAGCAAAAACACAC+GGG | + | chr4_4:38914988-38915007 | Msa0680100:intron | 40.0% | |
| GCAACATTACGATAGAAGTG+TGG | + | chr4_4:38915120-38915139 | Msa0680100:intron | 40.0% | |
| TACCTATGATGCATAGGTAC+GGG | - | chr4_4:38915330-38915349 | None:intergenic | 40.0% | |
| CTACCTATGATGCATAGGTA+CGG | - | chr4_4:38915331-38915350 | None:intergenic | 40.0% | |
| ACAACCTACCTATGATGCAT+AGG | - | chr4_4:38915336-38915355 | None:intergenic | 40.0% | |
| !! | CAGGATTTTAAGGGCCAAAT+TGG | + | chr4_4:38915457-38915476 | Msa0680100:intron | 40.0% |
| !! | GATTTTAAGGGCCAAATTGG+AGG | + | chr4_4:38915460-38915479 | Msa0680100:CDS | 40.0% |
| CATCACAGAAACCTCCAATT+TGG | - | chr4_4:38915474-38915493 | None:intergenic | 40.0% | |
| ! | TTCTGACCCAAGTATTTTCC+AGG | + | chr4_4:38915555-38915574 | Msa0680100:CDS | 40.0% |
| TTATATGCCGCCCATATATG+TGG | + | chr4_4:38915689-38915708 | Msa0680100:CDS | 40.0% | |
| CCTATATTGCATCAGATTGC+AGG | - | chr4_4:38915761-38915780 | None:intergenic | 40.0% | |
| CCTGCAATCTGATGCAATAT+AGG | + | chr4_4:38915758-38915777 | Msa0680100:intron | 40.0% | |
| AATCCTTAACAAGTGCCCTA+AGG | + | chr4_4:38915922-38915941 | Msa0680100:intron | 40.0% | |
| ATCCTTAACAAGTGCCCTAA+GGG | + | chr4_4:38915923-38915942 | Msa0680100:intron | 40.0% | |
| ! | ACCTTCTGACTTTGTTATGG+TGG | + | chr4_4:38915997-38916016 | Msa0680100:intron | 40.0% |
| ! | GGTTGTTGCTTCACAGAATT+TGG | + | chr4_4:38916227-38916246 | Msa0680100:intron | 40.0% |
| GATTGTACATCAATCAAGGG+AGG | + | chr4_4:38916337-38916356 | Msa0680100:intron | 40.0% | |
| CGCAATTTGTGCAGAAACGA+CGG | + | chr4_4:38908896-38908915 | Msa0680100:intron | 45.0% | |
| !! | ACGACGGTTGATAGCTCTAT+AGG | + | chr4_4:38908912-38908931 | Msa0680100:intron | 45.0% |
| GAGGTTGTCGATGTGATGAA+AGG | + | chr4_4:38908955-38908974 | Msa0680100:intron | 45.0% | |
| GGAAGAGAGATAGAGAGAGA+TGG | + | chr4_4:38909011-38909030 | Msa0680100:intron | 45.0% | |
| ACGGAAGGGAAAACATGACA+GGG | + | chr4_4:38909318-38909337 | Msa0680100:intron | 45.0% | |
| GAAGAGAGACAGAGCAATCT+CGG | + | chr4_4:38909361-38909380 | Msa0680100:intron | 45.0% | |
| CCCGAGTTTCAAAAGCTCAT+GGG | - | chr4_4:38909393-38909412 | None:intergenic | 45.0% | |
| !!! | CCCATGAGCTTTTGAAACTC+GGG | + | chr4_4:38909390-38909409 | Msa0680100:CDS | 45.0% |
| ACCCGAGTTTCAAAAGCTCA+TGG | - | chr4_4:38909394-38909413 | None:intergenic | 45.0% | |
| AGAGAGACAAGGTTGCTGAT+AGG | + | chr4_4:38909423-38909442 | Msa0680100:CDS | 45.0% | |
| GAGAGACAAGGTTGCTGATA+GGG | + | chr4_4:38909424-38909443 | Msa0680100:CDS | 45.0% | |
| TGATAGGGTTCTCCAACTCT+GGG | + | chr4_4:38909439-38909458 | Msa0680100:CDS | 45.0% | |
| ATTAAGAGGAGGCAGTACAC+CGG | - | chr4_4:38909552-38909571 | None:intergenic | 45.0% | |
| GTGCACAAAACTACTCTCGA+TGG | + | chr4_4:38909578-38909597 | Msa0680100:CDS | 45.0% | |
| CGATGGTCCCTTCATATTAC+AGG | + | chr4_4:38909595-38909614 | Msa0680100:CDS | 45.0% | |
| GGTCCCTTCATATTACAGGT+AGG | + | chr4_4:38909599-38909618 | Msa0680100:intron | 45.0% | |
| TCTAATGTAACGGTGAGACG+TGG | + | chr4_4:38910051-38910070 | Msa0680100:CDS | 45.0% | |
| AAGGACTTACCTAGGTTGCT+TGG | - | chr4_4:38910177-38910196 | None:intergenic | 45.0% | |
| !! | GAACTGGTTTGTCTCATGGT+TGG | + | chr4_4:38910307-38910326 | Msa0680100:intron | 45.0% |
| GAAGGCTGCAACAAAACAAG+TGG | + | chr4_4:38910553-38910572 | Msa0680100:intron | 45.0% | |
| CTGCAACAAAACAAGTGGAC+TGG | + | chr4_4:38910558-38910577 | Msa0680100:CDS | 45.0% | |
| GATAGATTTCCGGCAAAGAG+TGG | + | chr4_4:38910603-38910622 | Msa0680100:CDS | 45.0% | |
| !! | TTCGCAAGCTCACTTTTCAG+GGG | - | chr4_4:38910927-38910946 | None:intergenic | 45.0% |
| !! | CATTCGCAAGCTCACTTTTC+AGG | - | chr4_4:38910929-38910948 | None:intergenic | 45.0% |
| TTTGCTACGCTTGGAGTTGA+TGG | + | chr4_4:38911289-38911308 | Msa0680100:CDS | 45.0% | |
| GATTGATGAGCCATGCAAGT+CGG | + | chr4_4:38911517-38911536 | Msa0680100:CDS | 45.0% | |
| GGACTCTTTAGCAATCCTCA+AGG | - | chr4_4:38911555-38911574 | None:intergenic | 45.0% | |
| GGATCAAGCCGATGTCATTA+AGG | + | chr4_4:38911661-38911680 | Msa0680100:CDS | 45.0% | |
| GACACCCAATGACGAATAGT+AGG | + | chr4_4:38912088-38912107 | Msa0680100:intron | 45.0% | |
| AAGTTAACCCACTTATGGGG+AGG | - | chr4_4:38912197-38912216 | None:intergenic | 45.0% | |
| TTGCGTCCTGTGTTGCAATT+TGG | + | chr4_4:38912969-38912988 | Msa0680100:intron | 45.0% | |
| CAAGAGCCAAATTGCAACAC+AGG | - | chr4_4:38912978-38912997 | None:intergenic | 45.0% | |
| GATGTGCAATTGTGGGTATC+AGG | + | chr4_4:38913124-38913143 | Msa0680100:intron | 45.0% | |
| ATTGTGGGTATCAGGTTCAC+TGG | + | chr4_4:38913132-38913151 | Msa0680100:intron | 45.0% | |
| GTCAGCTTCCTTTAGTGCAT+TGG | + | chr4_4:38913311-38913330 | Msa0680100:intron | 45.0% | |
| TGGTACATTGATCCTCCCTT+TGG | + | chr4_4:38913344-38913363 | Msa0680100:intron | 45.0% | |
| GCATATACACAACCAAAGGG+AGG | - | chr4_4:38913359-38913378 | None:intergenic | 45.0% | |
| CCTCACCAAATACCAAACCA+AGG | - | chr4_4:38913843-38913862 | None:intergenic | 45.0% | |
| !! | CCTTGGTTTGGTATTTGGTG+AGG | + | chr4_4:38913840-38913859 | Msa0680100:intron | 45.0% |
| !!! | CTGGCTCAGTTTTGGATTGT+TGG | + | chr4_4:38913872-38913891 | Msa0680100:intron | 45.0% |
| GATCCAGGACAAAGAAACCA+TGG | - | chr4_4:38913922-38913941 | None:intergenic | 45.0% | |
| CTTTGTCCTGGATCGTTGTT+TGG | + | chr4_4:38913928-38913947 | Msa0680100:intron | 45.0% | |
| !!! | GAAGCATTGGTTTTGGCCTA+TGG | + | chr4_4:38914052-38914071 | Msa0680100:intron | 45.0% |
| GCCGAGACAAGAAAAACCAA+TGG | - | chr4_4:38914153-38914172 | None:intergenic | 45.0% | |
| ! | TGGTTTTTCTTGTCTCGGCT+TGG | + | chr4_4:38914154-38914173 | Msa0680100:intron | 45.0% |
| CCATAGTCAACAATGGAAGG+AGG | - | chr4_4:38914264-38914283 | None:intergenic | 45.0% | |
| ! | CCTCCTTCCATTGTTGACTA+TGG | + | chr4_4:38914261-38914280 | Msa0680100:intron | 45.0% |
| GAGCCATAGTCAACAATGGA+AGG | - | chr4_4:38914267-38914286 | None:intergenic | 45.0% | |
| GGAAGAGCCATAGTCAACAA+TGG | - | chr4_4:38914271-38914290 | None:intergenic | 45.0% | |
| CTATGGCTCTTCCTTGCATT+TGG | + | chr4_4:38914278-38914297 | Msa0680100:intron | 45.0% | |
| ! | TGGTTTTTCTTGTCTCGGCT+CGG | + | chr4_4:38914154-38914173 | Msa0680100:intron | 45.0% |
| GGAGGTCATATACAAGACCA+AGG | - | chr4_4:38914355-38914374 | None:intergenic | 45.0% | |
| CCATAGTCTACAATGGAAGG+AGG | - | chr4_4:38914373-38914392 | None:intergenic | 45.0% | |
| CCTCCTTCCATTGTAGACTA+TGG | + | chr4_4:38914370-38914389 | Msa0680100:intron | 45.0% | |
| GAGCCATAGTCTACAATGGA+AGG | - | chr4_4:38914376-38914395 | None:intergenic | 45.0% | |
| GGAAGAGCCATAGTCTACAA+TGG | - | chr4_4:38914380-38914399 | None:intergenic | 45.0% | |
| !! | TATTGACTTCTACCGGATGG+TGG | + | chr4_4:38914525-38914544 | Msa0680100:intron | 45.0% |
| CAAGAAGCAACCACAACTCA+AGG | - | chr4_4:38914591-38914610 | None:intergenic | 45.0% | |
| GAGTTGTGGTTGCTTCTTGT+TGG | + | chr4_4:38914592-38914611 | Msa0680100:intron | 45.0% | |
| GAAAGATGCCGGGAATACAT+CGG | - | chr4_4:38914648-38914667 | None:intergenic | 45.0% | |
| GAATACCTTCCAACTTGAGG+GGG | + | chr4_4:38914702-38914721 | Msa0680100:intron | 45.0% | |
| TCTAATAGTCCCCCTCAAGT+TGG | - | chr4_4:38914714-38914733 | None:intergenic | 45.0% | |
| AAGTTAACCCACTTATGGGG+AGG | - | chr4_4:38912197-38912216 | None:intergenic | 45.0% | |
| ! | GCTTTTCCCTCCTTCATCAA+TGG | + | chr4_4:38914853-38914872 | Msa0680100:intron | 45.0% |
| TGGCATCCATTGATGAAGGA+GGG | - | chr4_4:38912273-38912292 | None:intergenic | 45.0% | |
| ATGGCATCCATTGATGAAGG+AGG | - | chr4_4:38912274-38912293 | None:intergenic | 45.0% | |
| !! | GGTACCGGTGTTATGAAACA+TGG | - | chr4_4:38914882-38914901 | None:intergenic | 45.0% |
| TGTTTCATAACACCGGTACC+GGG | + | chr4_4:38914882-38914901 | Msa0680100:intron | 45.0% | |
| TACCATACGCGTACCCAATA+CGG | - | chr4_4:38914915-38914934 | None:intergenic | 45.0% | |
| ! | ATACGTACCGGTACCTATAC+TGG | + | chr4_4:38915296-38915315 | Msa0680100:intron | 45.0% |
| ! | TACGTACCGGTACCTATACT+GGG | + | chr4_4:38915297-38915316 | Msa0680100:intron | 45.0% |
| ATGATGCATAGGTACGGGTA+CGG | - | chr4_4:38915325-38915344 | None:intergenic | 45.0% | |
| TACCCGTACCTATGCATCAT+AGG | + | chr4_4:38915325-38915344 | Msa0680100:intron | 45.0% | |
| CGTACCTATGCATCATAGGT+AGG | + | chr4_4:38915329-38915348 | Msa0680100:intron | 45.0% | |
| AATCACTGTTAGCTGACTGC+TGG | - | chr4_4:38915423-38915442 | None:intergenic | 45.0% | |
| ! | GATGAGCGTGTTGACATAAC+TGG | + | chr4_4:38915490-38915509 | Msa0680100:CDS | 45.0% |
| CTTGATCGCGCCACATATAT+GGG | - | chr4_4:38915702-38915721 | None:intergenic | 45.0% | |
| ! | CATCTTTTGTAGGGTAACGC+AGG | - | chr4_4:38915734-38915753 | None:intergenic | 45.0% |
| ! | GCAGGACAGCATCTTTTGTA+GGG | - | chr4_4:38915743-38915762 | None:intergenic | 45.0% |
| ! | TGCAGGACAGCATCTTTTGT+AGG | - | chr4_4:38915744-38915763 | None:intergenic | 45.0% |
| CTTGCTAACAAGTGCCCTTA+GGG | - | chr4_4:38915940-38915959 | None:intergenic | 45.0% | |
| TCTTGCTAACAAGTGCCCTT+AGG | - | chr4_4:38915941-38915960 | None:intergenic | 45.0% | |
| GCCACCATAACAAAGTCAGA+AGG | - | chr4_4:38916001-38916020 | None:intergenic | 45.0% | |
| !!! | TCCATTTTGACTCACCCTTG+TGG | + | chr4_4:38916185-38916204 | Msa0680100:intron | 45.0% |
| ACCACAAGGGTGAGTCAAAA+TGG | - | chr4_4:38916189-38916208 | None:intergenic | 45.0% | |
| !! | TAGTAAAAAAAAAAAAAAAA+AGG | - | chr4_4:38910506-38910525 | None:intergenic | 5.0% |
| TGGAAGCTTCGAAGATCTCC+AGG | - | chr4_4:38908682-38908701 | None:intergenic | 50.0% | |
| ! | TAGCTCTATAGGTGATGGCG+TGG | + | chr4_4:38908923-38908942 | Msa0680100:intron | 50.0% |
| GGCAAAGGAAGAAGTTGCAG+AGG | + | chr4_4:38908983-38909002 | Msa0680100:intron | 50.0% | |
| GAAGAAGTTGCAGAGGAGAC+TGG | + | chr4_4:38908990-38909009 | Msa0680100:intron | 50.0% | |
| CACGGAAGGGAAAACATGAC+AGG | + | chr4_4:38909317-38909336 | Msa0680100:intron | 50.0% | |
| CTGATAGGGTTCTCCAACTC+TGG | + | chr4_4:38909438-38909457 | Msa0680100:CDS | 50.0% | |
| TTGTGCGCCTCCTGGATTAA+AGG | + | chr4_4:38909931-38909950 | Msa0680100:CDS | 50.0% | |
| AACGGTGAGACGTGGAAGAT+TGG | + | chr4_4:38910059-38910078 | Msa0680100:CDS | 50.0% | |
| GACGTTGAGTCACTGTGACT+GGG | - | chr4_4:38910135-38910154 | None:intergenic | 50.0% | |
| ACTTACCTAGGTTGCTTGGC+GGG | - | chr4_4:38910173-38910192 | None:intergenic | 50.0% | |
| GACTTACCTAGGTTGCTTGG+CGG | - | chr4_4:38910174-38910193 | None:intergenic | 50.0% | |
| ACTCTCTACCCACTCTTTGC+CGG | - | chr4_4:38910615-38910634 | None:intergenic | 50.0% | |
| !! | TCTTTCTGGTGCTGCAAACG+TGG | + | chr4_4:38910666-38910685 | Msa0680100:CDS | 50.0% |
| GCAGTTGGCATCTCTAAGCT+GGG | + | chr4_4:38910688-38910707 | Msa0680100:CDS | 50.0% | |
| CAGTTGGCATCTCTAAGCTG+GGG | + | chr4_4:38910689-38910708 | Msa0680100:CDS | 50.0% | |
| AGTTGGCATCTCTAAGCTGG+GGG | + | chr4_4:38910690-38910709 | Msa0680100:CDS | 50.0% | |
| GAAGCCCCGTAGATAGTAAC+AGG | - | chr4_4:38910784-38910803 | None:intergenic | 50.0% | |
| GCAGATCAGTGCAGTTGAGT+TGG | + | chr4_4:38911798-38911817 | Msa0680100:intron | 50.0% | |
| GATTAGGGCGTAAAAGCTCC+TGG | - | chr4_4:38911864-38911883 | None:intergenic | 50.0% | |
| AGGTGTAACCTCCCCATAAG+TGG | + | chr4_4:38912186-38912205 | Msa0680100:intron | 50.0% | |
| GGTGTAACCTCCCCATAAGT+GGG | + | chr4_4:38912187-38912206 | Msa0680100:intron | 50.0% | |
| TCCTGGATCGTTGTTTGGAG+TGG | + | chr4_4:38913933-38913952 | Msa0680100:intron | 50.0% | |
| ACCACTCCAAACAACGATCC+AGG | - | chr4_4:38913937-38913956 | None:intergenic | 50.0% | |
| !! | TTCTTGTCTCGGCTTGGCAT+AGG | + | chr4_4:38914160-38914179 | Msa0680100:intron | 50.0% |
| AGCAACGCTTAACCACCATC+CGG | - | chr4_4:38914540-38914559 | None:intergenic | 50.0% | |
| ! | GATGGTGGTTAAGCGTTGCT+TGG | + | chr4_4:38914540-38914559 | Msa0680100:intron | 50.0% |
| !! | ATAGTCCCCCTCAAGTTGGA+AGG | - | chr4_4:38914710-38914729 | None:intergenic | 50.0% |
| AGGTGTAACCTCCCCATAAG+TGG | + | chr4_4:38912186-38912205 | Msa0680100:intron | 50.0% | |
| GGTGTAACCTCCCCATAAGT+GGG | + | chr4_4:38912187-38912206 | Msa0680100:intron | 50.0% | |
| ACCATACGCGTACCCAATAC+GGG | - | chr4_4:38914914-38914933 | None:intergenic | 50.0% | |
| ACGGTACCCAGTATAGGTAC+CGG | - | chr4_4:38915306-38915325 | None:intergenic | 50.0% | |
| CCTTGATCGCGCCACATATA+TGG | - | chr4_4:38915703-38915722 | None:intergenic | 50.0% | |
| CCATATATGTGGCGCGATCA+AGG | + | chr4_4:38915700-38915719 | Msa0680100:CDS | 50.0% | |
| ! | TGCCCTTAGGGCACTTGTTA+AGG | - | chr4_4:38915928-38915947 | None:intergenic | 50.0% |
| ! | CTCTATAGGTGATGGCGTGG+AGG | + | chr4_4:38908926-38908945 | Msa0680100:intron | 55.0% |
| ! | CAGGAGGCGCACAAACATCA+AGG | - | chr4_4:38909925-38909944 | None:intergenic | 55.0% |
| CTTGATGTTTGTGCGCCTCC+TGG | + | chr4_4:38909923-38909942 | Msa0680100:CDS | 55.0% | |
| CGACGTTGAGTCACTGTGAC+TGG | - | chr4_4:38910136-38910155 | None:intergenic | 55.0% | |
| GGCAGTTGGCATCTCTAAGC+TGG | + | chr4_4:38910687-38910706 | Msa0680100:CDS | 55.0% | |
| GTTGGCATCTCTAAGCTGGG+GGG | + | chr4_4:38910691-38910710 | Msa0680100:CDS | 55.0% | |
| !! | GTACGATGAGCCGACTTGCA+TGG | - | chr4_4:38911530-38911549 | None:intergenic | 55.0% |
| TTTCGAGCAGCCTCGTCTGA+TGG | - | chr4_4:38911623-38911642 | None:intergenic | 55.0% | |
| ATCAGACGAGGCTGCTCGAA+AGG | + | chr4_4:38911622-38911641 | Msa0680100:CDS | 55.0% | |
| TCAGACGAGGCTGCTCGAAA+GGG | + | chr4_4:38911623-38911642 | Msa0680100:CDS | 55.0% | |
| ! | GAGAGTGTGGCCGAGAAAGA+AGG | - | chr4_4:38913045-38913064 | None:intergenic | 55.0% |
| !! | TTGTCTCGGCTTGGCATAGG+AGG | + | chr4_4:38914163-38914182 | Msa0680100:intron | 55.0% |
| !! | TGTCTCGGCTTGGCATAGGA+GGG | + | chr4_4:38914164-38914183 | Msa0680100:intron | 55.0% |
| !! | TTCTTGTCTCGGCTCGGCAT+TGG | + | chr4_4:38914304-38914323 | Msa0680100:intron | 55.0% |
| ACCCGTATTGGGTACGCGTA+TGG | + | chr4_4:38914910-38914929 | Msa0680100:intron | 55.0% | |
| CAGCAAAAACACACGGGCAG+TGG | + | chr4_4:38914994-38915013 | Msa0680100:intron | 55.0% | |
| ACGGGTACGGTACCCAGTAT+AGG | - | chr4_4:38915312-38915331 | None:intergenic | 55.0% | |
| GGGCGGCATATAATGCTGCA+TGG | - | chr4_4:38915682-38915701 | None:intergenic | 55.0% | |
| GATCGCGCCACATATATGGG+CGG | - | chr4_4:38915699-38915718 | None:intergenic | 55.0% | |
| ! | AGGTGATGGCGTGGAGGAAG+AGG | + | chr4_4:38908932-38908951 | Msa0680100:intron | 60.0% |
| ! | GGTGATGGCGTGGAGGAAGA+GGG | + | chr4_4:38908933-38908952 | Msa0680100:intron | 60.0% |
| ACTCTCCCGCCAAGCAACCT+AGG | + | chr4_4:38910165-38910184 | Msa0680100:CDS | 60.0% | |
| ! | GGTGCTGCAAACGTGGCAGT+TGG | + | chr4_4:38910673-38910692 | Msa0680100:CDS | 60.0% |
| CGGCTCATCGTACTGCCTTG+AGG | + | chr4_4:38911537-38911556 | Msa0680100:CDS | 60.0% | |
| GGGACTATGGCCATCAGACG+AGG | + | chr4_4:38911610-38911629 | Msa0680100:CDS | 60.0% | |
| !! | TGTCTCGGCTCGGCATTGGA+AGG | + | chr4_4:38914308-38914327 | Msa0680100:intron | 60.0% |
| !! | GTCTCGGCTCGGCATTGGAA+GGG | + | chr4_4:38914309-38914328 | Msa0680100:intron | 60.0% |
| TACCGGGTACGCACCCGTAT+TGG | + | chr4_4:38914898-38914917 | Msa0680100:intron | 60.0% | |
| ACCGGGTACGCACCCGTATT+GGG | + | chr4_4:38914899-38914918 | Msa0680100:intron | 60.0% | |
| ACCCAATACGGGTGCGTACC+CGG | - | chr4_4:38914903-38914922 | None:intergenic | 60.0% | |
| GATGGCGTGGAGGAAGAGGG+AGG | + | chr4_4:38908936-38908955 | Msa0680100:intron | 65.0% | |
| TACGGGTGCGTACCCGGTAC+CGG | - | chr4_4:38914897-38914916 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 38908670 | 38916569 | 38908670 | ID=Msa0680100;Name=Msa0680100 |
| chr4_4 | mRNA | 38908670 | 38916569 | 38908670 | ID=Msa0680100-mRNA-1;Parent=Msa0680100;Name=Msa0680100-mRNA-1;_AED=0.29;_eAED=0.29;_QI=0|0.8|0.63|0.81|0.7|0.72|11|0|495 |
| chr4_4 | exon | 38908670 | 38908716 | 38908670 | ID=Msa0680100-mRNA-1:exon:9178;Parent=Msa0680100-mRNA-1 |
| chr4_4 | exon | 38909373 | 38909616 | 38909373 | ID=Msa0680100-mRNA-1:exon:9179;Parent=Msa0680100-mRNA-1 |
| chr4_4 | exon | 38909821 | 38909952 | 38909821 | ID=Msa0680100-mRNA-1:exon:9180;Parent=Msa0680100-mRNA-1 |
| chr4_4 | exon | 38910042 | 38910186 | 38910042 | ID=Msa0680100-mRNA-1:exon:9181;Parent=Msa0680100-mRNA-1 |
| chr4_4 | exon | 38910554 | 38910735 | 38910554 | ID=Msa0680100-mRNA-1:exon:9182;Parent=Msa0680100-mRNA-1 |
| chr4_4 | exon | 38911184 | 38911405 | 38911184 | ID=Msa0680100-mRNA-1:exon:9183;Parent=Msa0680100-mRNA-1 |
| chr4_4 | exon | 38911485 | 38911682 | 38911485 | ID=Msa0680100-mRNA-1:exon:9184;Parent=Msa0680100-mRNA-1 |
| chr4_4 | exon | 38911802 | 38911936 | 38911802 | ID=Msa0680100-mRNA-1:exon:9185;Parent=Msa0680100-mRNA-1 |
| chr4_4 | exon | 38915460 | 38915576 | 38915460 | ID=Msa0680100-mRNA-1:exon:9186;Parent=Msa0680100-mRNA-1 |
| chr4_4 | exon | 38915665 | 38915721 | 38915665 | ID=Msa0680100-mRNA-1:exon:9187;Parent=Msa0680100-mRNA-1 |
| chr4_4 | exon | 38916561 | 38916569 | 38916561 | ID=Msa0680100-mRNA-1:exon:9188;Parent=Msa0680100-mRNA-1 |
| chr4_4 | CDS | 38908670 | 38908716 | 38908670 | ID=Msa0680100-mRNA-1:cds;Parent=Msa0680100-mRNA-1 |
| chr4_4 | CDS | 38909373 | 38909616 | 38909373 | ID=Msa0680100-mRNA-1:cds;Parent=Msa0680100-mRNA-1 |
| chr4_4 | CDS | 38909821 | 38909952 | 38909821 | ID=Msa0680100-mRNA-1:cds;Parent=Msa0680100-mRNA-1 |
| chr4_4 | CDS | 38910042 | 38910186 | 38910042 | ID=Msa0680100-mRNA-1:cds;Parent=Msa0680100-mRNA-1 |
| chr4_4 | CDS | 38910554 | 38910735 | 38910554 | ID=Msa0680100-mRNA-1:cds;Parent=Msa0680100-mRNA-1 |
| chr4_4 | CDS | 38911184 | 38911405 | 38911184 | ID=Msa0680100-mRNA-1:cds;Parent=Msa0680100-mRNA-1 |
| chr4_4 | CDS | 38911485 | 38911682 | 38911485 | ID=Msa0680100-mRNA-1:cds;Parent=Msa0680100-mRNA-1 |
| chr4_4 | CDS | 38911802 | 38911936 | 38911802 | ID=Msa0680100-mRNA-1:cds;Parent=Msa0680100-mRNA-1 |
| chr4_4 | CDS | 38915460 | 38915576 | 38915460 | ID=Msa0680100-mRNA-1:cds;Parent=Msa0680100-mRNA-1 |
| chr4_4 | CDS | 38915665 | 38915721 | 38915665 | ID=Msa0680100-mRNA-1:cds;Parent=Msa0680100-mRNA-1 |
| chr4_4 | CDS | 38916561 | 38916569 | 38916561 | ID=Msa0680100-mRNA-1:cds;Parent=Msa0680100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
