Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0676090 | XP_013455479.1 | 76.357 | 258 | 18 | 3 | 1 | 216 | 1 | 257 | 2.76e-113 | 334 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0676090 | sp|P31230|AIMP1_MOUSE | 43.448 | 145 | 55 | 1 | 74 | 191 | 140 | 284 | 3.25e-29 | 114 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0676090 | A0A072UUH4 | 76.357 | 258 | 18 | 3 | 1 | 216 | 1 | 257 | 1.32e-113 | 334 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0092480 | Msa0676090 | 0.910624 | 1.521243e-82 | -8.615850e-47 |
| Msa0603090 | Msa0676090 | -0.806055 | 9.905177e-50 | -8.615850e-47 |
| Msa0651870 | Msa0676090 | -0.813830 | 2.098894e-51 | -8.615850e-47 |
| Msa0651890 | Msa0676090 | -0.813105 | 3.028316e-51 | -8.615850e-47 |
| Msa0660150 | Msa0676090 | -0.800470 | 1.420050e-48 | -8.615850e-47 |
| Msa0676090 | Msa0676310 | 0.923149 | 3.882692e-89 | -8.615850e-47 |
| Msa0676090 | Msa0805390 | -0.809151 | 2.180551e-50 | -8.615850e-47 |
| Msa0676090 | Msa1039810 | -0.800161 | 1.641037e-48 | -8.615850e-47 |
| Msa0676090 | Msa1131680 | -0.821842 | 3.255895e-53 | -8.615850e-47 |
| Msa0676090 | Msa1202470 | -0.808375 | 3.194588e-50 | -8.615850e-47 |
| Msa0676090 | Msa1251410 | -0.802574 | 5.259830e-49 | -8.615850e-47 |
| Msa0676090 | Msa1254360 | 0.811450 | 6.957362e-51 | -8.615850e-47 |
| Msa0676090 | Msa1258030 | 0.810366 | 1.194596e-50 | -8.615850e-47 |
| Msa0676090 | Msa1341390 | 0.806672 | 7.341423e-50 | -8.615850e-47 |
| Msa0563440 | Msa0676090 | -0.800819 | 1.204885e-48 | -8.615850e-47 |
| Msa0569580 | Msa0676090 | 0.800865 | 1.179473e-48 | -8.615850e-47 |
| Msa0588110 | Msa0676090 | 0.818142 | 2.287213e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0676090 | MtrunA17_Chr4g0019821 | 76.357 | 258 | 18 | 3 | 1 | 216 | 1 | 257 | 2.54e-117 | 334 |
| Msa0676090 | MtrunA17_Chr4g0068561 | 40.373 | 161 | 65 | 2 | 79 | 210 | 34 | 192 | 1.67e-31 | 114 |
| Msa0676090 | MtrunA17_Chr4g0039621 | 39.873 | 158 | 66 | 1 | 87 | 215 | 648 | 805 | 1.20e-28 | 112 |
| Msa0676090 | MtrunA17_Chr3g0128701 | 34.591 | 159 | 73 | 3 | 76 | 203 | 218 | 376 | 1.25e-17 | 80.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0676090 | AT3G59980.1 | 53.960 | 202 | 48 | 3 | 59 | 216 | 73 | 273 | 4.41e-63 | 197 |
| Msa0676090 | AT4G13780.1 | 36.747 | 166 | 76 | 1 | 79 | 215 | 631 | 796 | 9.26e-24 | 99.0 |
| Msa0676090 | AT2G40660.1 | 41.860 | 86 | 50 | 0 | 86 | 171 | 231 | 316 | 2.66e-15 | 73.9 |
Find 40 sgRNAs with CRISPR-Local
Find 303 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGTGAGAGAAAAGGGAATT+TGG | 0.204168 | 4_4:-26284106 | None:intergenic |
| TCACGCCCCAAAACCCTATC+TGG | 0.209394 | 4_4:+26284141 | Msa0676090:CDS |
| CTGCTGGGTTGCTTGATATA+AGG | 0.220534 | 4_4:+26284256 | Msa0676090:CDS |
| TTTGGGTAGGAATGAGTAAT+TGG | 0.260789 | 4_4:-26284088 | None:intergenic |
| GAAGAAGAAAGAGTGCAAAA+TGG | 0.289404 | 4_4:-26284171 | None:intergenic |
| TGTCCCTCTTGAACAACTTC+AGG | 0.318121 | 4_4:+26284392 | Msa0676090:CDS |
| AGACCACTGCAAATAATTCT+AGG | 0.337017 | 4_4:-26284360 | None:intergenic |
| AGAGAACCCAGATAGGGTTT+TGG | 0.349454 | 4_4:-26284148 | None:intergenic |
| AGTGAGAGAAAAGGGAATTT+GGG | 0.353893 | 4_4:-26284105 | None:intergenic |
| ATGTGTGGCGTCAAGTCTTC+AGG | 0.359642 | 4_4:+26286707 | Msa0676090:CDS |
| TGCTGGGTTGCTTGATATAA+GGG | 0.359660 | 4_4:+26284257 | Msa0676090:CDS |
| AAGAAGAGAGTGAGAGAAAA+GGG | 0.367952 | 4_4:-26284113 | None:intergenic |
| GAAGAAGAGAGTGAGAGAAA+AGG | 0.375038 | 4_4:-26284114 | None:intergenic |
| TATGTTGAAGAGGTTGATAT+TGG | 0.447688 | 4_4:+26284327 | Msa0676090:CDS |
| CAAGTCTTCAGGAATGTTGA+TGG | 0.466166 | 4_4:+26286718 | Msa0676090:CDS |
| CTGCAAATAATTCTAGGTTC+AGG | 0.473329 | 4_4:-26284354 | None:intergenic |
| AGTAGTATTAAAGATACTGC+TGG | 0.483323 | 4_4:+26284240 | Msa0676090:intron |
| TTGACGCCACACATATTCCT+TGG | 0.483477 | 4_4:-26286698 | None:intergenic |
| CATGTTATGCGTACATCTGC+AGG | 0.488090 | 4_4:+26288505 | Msa0676090:CDS |
| AAAATGGAGAGAACCCAGAT+AGG | 0.491884 | 4_4:-26284155 | None:intergenic |
| TGAATCACTTTATGTTGAAG+AGG | 0.510641 | 4_4:+26284317 | Msa0676090:CDS |
| TTCTTTCGAATCTGAAGCCA+AGG | 0.511951 | 4_4:+26286681 | Msa0676090:CDS |
| TATTTGCATTCTGCAAAGAC+TGG | 0.514661 | 4_4:-26288540 | None:intergenic |
| AAATGGAGAGAACCCAGATA+GGG | 0.556896 | 4_4:-26284154 | None:intergenic |
| CAGCCTCATCTTAAAACAGA+TGG | 0.557780 | 4_4:+26288457 | Msa0676090:CDS |
| TTGGTCAGATTGTGAAAGCA+TGG | 0.562162 | 4_4:+26284280 | Msa0676090:CDS |
| TTCTTCTTCTGAGACAGTCA+CGG | 0.562195 | 4_4:+26284188 | Msa0676090:CDS |
| AAAATGGCAAATGTATTGAA+AGG | 0.563636 | 4_4:+26283997 | None:intergenic |
| CACGCCCCAAAACCCTATCT+GGG | 0.569575 | 4_4:+26284142 | Msa0676090:CDS |
| AGAGAAAAGGGAATTTGGGT+AGG | 0.575873 | 4_4:-26284101 | None:intergenic |
| GGTTCTTGTACTGCGATGCT+AGG | 0.576090 | 4_4:+26288478 | Msa0676090:CDS |
| GAAACCTGAAGTTGTTCAAG+AGG | 0.586172 | 4_4:-26284396 | None:intergenic |
| GTAGTATTAAAGATACTGCT+GGG | 0.595902 | 4_4:+26284241 | Msa0676090:intron |
| GAACCTAGAATTATTTGCAG+TGG | 0.609307 | 4_4:+26284357 | Msa0676090:CDS |
| CGTTGTTCGTGAGAGTGTTG+TGG | 0.624714 | 4_4:-26284064 | None:intergenic |
| ATGGCAAATGTATTGAAAGG+TGG | 0.625147 | 4_4:+26284000 | Msa0676090:CDS |
| GGGTTGCTTGATATAAGGGT+TGG | 0.626322 | 4_4:+26284261 | Msa0676090:CDS |
| AAACCTGAAGTTGTTCAAGA+GGG | 0.658505 | 4_4:-26284395 | None:intergenic |
| CTGAAGCCAAGGAATATGTG+TGG | 0.680780 | 4_4:+26286692 | Msa0676090:CDS |
| TGTTCGTGAGAGTGTTGTGG+TGG | 0.704660 | 4_4:-26284061 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTTTTTTATGAATTTTTTT+TGG | + | chr4_4:26284422-26284441 | Msa0676090:intron | 10.0% |
| !!! | ATTGAAATTATGTTTTTTAT+TGG | + | chr4_4:26284451-26284470 | Msa0676090:intron | 10.0% |
| !!! | AAAATATCTTTTACTAATAT+CGG | + | chr4_4:26285877-26285896 | Msa0676090:intron | 10.0% |
| !!! | ATTTTTATTAAATAACATGT+TGG | - | chr4_4:26286205-26286224 | None:intergenic | 10.0% |
| !!! | AATACTAATAAATTTGTTTA+AGG | + | chr4_4:26286375-26286394 | Msa0676090:intron | 10.0% |
| !!! | AAAAAGAATTTTTAATTTGA+CGG | - | chr4_4:26286938-26286957 | None:intergenic | 10.0% |
| !! | GTATATAAAAATATTCAATG+CGG | - | chr4_4:26285126-26285145 | None:intergenic | 15.0% |
| !!! | ATATTTTTATATACTTGATG+TGG | + | chr4_4:26285132-26285151 | Msa0676090:intron | 15.0% |
| !!! | TATTTTTATATACTTGATGT+GGG | + | chr4_4:26285133-26285152 | Msa0676090:intron | 15.0% |
| !! | ATATATGAGGTATATTTAAA+GGG | - | chr4_4:26285236-26285255 | None:intergenic | 15.0% |
| !! | TAAACATAAATTTAGAAATG+AGG | - | chr4_4:26286240-26286259 | None:intergenic | 15.0% |
| !!! | TCTTTTTATTTAAATTATCC+AGG | - | chr4_4:26286355-26286374 | None:intergenic | 15.0% |
| !! | AAAGAATATTAAGTTACAAA+TGG | - | chr4_4:26288392-26288411 | None:intergenic | 15.0% |
| !! | TTCAATATGGAATTTAATTG+TGG | + | chr4_4:26284489-26284508 | Msa0676090:intron | 20.0% |
| !! | AAATTCTCCAAAATAGTTTA+TGG | - | chr4_4:26284678-26284697 | None:intergenic | 20.0% |
| !! | CATATATGAGGTATATTTAA+AGG | - | chr4_4:26285237-26285256 | None:intergenic | 20.0% |
| !! | AACTAAATTTCAAAGAAATC+TGG | + | chr4_4:26285645-26285664 | Msa0676090:intron | 20.0% |
| !!! | AAATCTGGAATTAAAACATA+TGG | + | chr4_4:26285660-26285679 | Msa0676090:intron | 20.0% |
| !!! | TTTTATAAAAACAGTATCGA+AGG | - | chr4_4:26285861-26285880 | None:intergenic | 20.0% |
| !!! | TTGTTTTAATTGAAGATTTG+TGG | + | chr4_4:26285916-26285935 | Msa0676090:intron | 20.0% |
| !! | ACAGTTCAAATATTAAAGTT+TGG | - | chr4_4:26286135-26286154 | None:intergenic | 20.0% |
| !! | TAAGCATACAACAAATATTA+AGG | - | chr4_4:26286270-26286289 | None:intergenic | 20.0% |
| !! | ATGAAAAATTAACCATGAAT+AGG | - | chr4_4:26286464-26286483 | None:intergenic | 20.0% |
| !!! | TAATTTTTCATATGCAAAAC+TGG | + | chr4_4:26286473-26286492 | Msa0676090:intron | 20.0% |
| !! | ATTAAAATGTAAGTTCTATG+AGG | + | chr4_4:26286540-26286559 | Msa0676090:intron | 20.0% |
| !! | ATTAATTGCAAAACATAAAG+TGG | - | chr4_4:26286569-26286588 | None:intergenic | 20.0% |
| !!! | TGCAATTAATATATTTGTTG+AGG | + | chr4_4:26286579-26286598 | Msa0676090:intron | 20.0% |
| !! | AATGAATTCACAAAGTAAAT+GGG | - | chr4_4:26287064-26287083 | None:intergenic | 20.0% |
| !! | AAATGAATTCACAAAGTAAA+TGG | - | chr4_4:26287065-26287084 | None:intergenic | 20.0% |
| !!! | TTCATTTTAACTTGCTATTA+AGG | - | chr4_4:26287289-26287308 | None:intergenic | 20.0% |
| !!! | AAATAGAAAATGTTTTCACA+AGG | + | chr4_4:26287328-26287347 | Msa0676090:intron | 20.0% |
| !!! | TTGCTGATTCAAAAAAAAAA+AGG | - | chr4_4:26287524-26287543 | None:intergenic | 20.0% |
| !! | TTGAATCAGCAAATATTATT+AGG | + | chr4_4:26287532-26287551 | Msa0676090:intron | 20.0% |
| !! | TATTAGAGTAATAGACTAAT+AGG | + | chr4_4:26288169-26288188 | Msa0676090:intron | 20.0% |
| !! | ATTAGAGTAATAGACTAATA+GGG | + | chr4_4:26288170-26288189 | Msa0676090:intron | 20.0% |
| !! | ACTAATGAATTATCATGTTA+TGG | - | chr4_4:26288349-26288368 | None:intergenic | 20.0% |
| !! | AGATACAAAAGAAAAAGATA+TGG | + | chr4_4:26288425-26288444 | Msa0676090:intron | 20.0% |
| !! | GATACAAAAGAAAAAGATAT+GGG | + | chr4_4:26288426-26288445 | Msa0676090:intron | 20.0% |
| !! | TTTTTATTGGCGCATTTTAT+CGG | + | chr4_4:26284464-26284483 | Msa0676090:intron | 25.0% |
| !! | CATTTTATCGGATTTCAATA+TGG | + | chr4_4:26284476-26284495 | Msa0676090:intron | 25.0% |
| ! | AATTTAATTGTGGACCAAAT+TGG | + | chr4_4:26284499-26284518 | Msa0676090:intron | 25.0% |
| !!! | GTTGTTTCCATAAACTATTT+TGG | + | chr4_4:26284668-26284687 | Msa0676090:intron | 25.0% |
| ! | TATGACTCAAATAAGTCATA+AGG | - | chr4_4:26284843-26284862 | None:intergenic | 25.0% |
| !!! | GTTTTAATCTCTTAAGTACA+TGG | + | chr4_4:26285312-26285331 | Msa0676090:intron | 25.0% |
| !! | TGCTGTATAGTATTTTTCTA+TGG | + | chr4_4:26286039-26286058 | Msa0676090:intron | 25.0% |
| !! | AATATTAAAGTTTGGAGTCT+TGG | - | chr4_4:26286127-26286146 | None:intergenic | 25.0% |
| ! | GTATGCTTATGTATTTAGAA+AGG | + | chr4_4:26286281-26286300 | Msa0676090:intron | 25.0% |
| ! | ACACAAAAACACAAATATGA+TGG | - | chr4_4:26286613-26286632 | None:intergenic | 25.0% |
| ! | TTTGACGGTTGAATTATTAA+GGG | - | chr4_4:26286923-26286942 | None:intergenic | 25.0% |
| ! | ATTTGACGGTTGAATTATTA+AGG | - | chr4_4:26286924-26286943 | None:intergenic | 25.0% |
| ! | ATGAATTCACAAAGTAAATG+GGG | - | chr4_4:26287063-26287082 | None:intergenic | 25.0% |
| !!! | GTTAATTTTACTTGCTAAGA+AGG | + | chr4_4:26287110-26287129 | Msa0676090:intron | 25.0% |
| !!! | TTTAGGGAACTTTGTTTTTT+AGG | - | chr4_4:26287661-26287680 | None:intergenic | 25.0% |
| ! | GATGAGAATAAATTCACTAT+AGG | - | chr4_4:26287758-26287777 | None:intergenic | 25.0% |
| ! | AATTTATTCTCATCATGTGT+GGG | + | chr4_4:26287764-26287783 | Msa0676090:intron | 25.0% |
| ! | TGAAACTAGACTCAATAATT+TGG | + | chr4_4:26287855-26287874 | Msa0676090:intron | 25.0% |
| !! | TTTTCTCCTTGTTGAAATTT+GGG | - | chr4_4:26288086-26288105 | None:intergenic | 25.0% |
| !! | ATTTTCTCCTTGTTGAAATT+TGG | - | chr4_4:26288087-26288106 | None:intergenic | 25.0% |
| ! | AAATTTCAACAAGGAGAAAA+TGG | + | chr4_4:26288086-26288105 | Msa0676090:intron | 25.0% |
| ! | AATTTCAACAAGGAGAAAAT+GGG | + | chr4_4:26288087-26288106 | Msa0676090:intron | 25.0% |
| ! | TACAAGGGAATACAAAAAAA+GGG | - | chr4_4:26288131-26288150 | None:intergenic | 25.0% |
| ! | TTACAAGGGAATACAAAAAA+AGG | - | chr4_4:26288132-26288151 | None:intergenic | 25.0% |
| ! | AAAGAAAAAGATATGGGAAT+TGG | + | chr4_4:26288432-26288451 | Msa0676090:CDS | 25.0% |
| AGTAGTATTAAAGATACTGC+TGG | + | chr4_4:26284240-26284259 | Msa0676090:intron | 30.0% | |
| GTAGTATTAAAGATACTGCT+GGG | + | chr4_4:26284241-26284260 | Msa0676090:intron | 30.0% | |
| TGAATCACTTTATGTTGAAG+AGG | + | chr4_4:26284317-26284336 | Msa0676090:CDS | 30.0% | |
| !! | TATGTTGAAGAGGTTGATAT+TGG | + | chr4_4:26284327-26284346 | Msa0676090:CDS | 30.0% |
| ! | GGTAAGTTGTTAGAACTTTT+AGG | + | chr4_4:26284538-26284557 | Msa0676090:intron | 30.0% |
| ! | ATATGTTTTGTGACACTGTT+TGG | - | chr4_4:26284760-26284779 | None:intergenic | 30.0% |
| TGAAATAAAGCAATCCAAAC+AGG | + | chr4_4:26284794-26284813 | Msa0676090:intron | 30.0% | |
| AAGAATAAATGGCTATCACT+AGG | - | chr4_4:26284930-26284949 | None:intergenic | 30.0% | |
| AGTGATAGCCATTTATTCTT+TGG | + | chr4_4:26284930-26284949 | Msa0676090:intron | 30.0% | |
| TTCACTCATCTATCAGTATT+TGG | + | chr4_4:26284957-26284976 | Msa0676090:intron | 30.0% | |
| ! | GCTTAATGGAATAGTCTTTT+GGG | - | chr4_4:26285080-26285099 | None:intergenic | 30.0% |
| CAAAAGACTATTCCATTAAG+CGG | + | chr4_4:26285079-26285098 | Msa0676090:intron | 30.0% | |
| AAAAGACTATTCCATTAAGC+GGG | + | chr4_4:26285080-26285099 | Msa0676090:intron | 30.0% | |
| AAATATTCAATGCGGTACTT+AGG | - | chr4_4:26285118-26285137 | None:intergenic | 30.0% | |
| GACTCATAACATAAGTACTT+TGG | + | chr4_4:26285155-26285174 | Msa0676090:intron | 30.0% | |
| TGATTCAATTTCTGACTGAT+CGG | + | chr4_4:26285199-26285218 | Msa0676090:intron | 30.0% | |
| AATCTTCAAAAATGCATGTG+AGG | + | chr4_4:26285272-26285291 | Msa0676090:intron | 30.0% | |
| ! | TTTGATTTCTGACATATGCA+AGG | + | chr4_4:26285342-26285361 | Msa0676090:intron | 30.0% |
| ! | TCAGCTAATATTTGGAATGA+TGG | - | chr4_4:26285702-26285721 | None:intergenic | 30.0% |
| CTTTCACTTCAGCTAATATT+TGG | - | chr4_4:26285710-26285729 | None:intergenic | 30.0% | |
| ! | TTTGTTTAAGGCCAATCATA+TGG | + | chr4_4:26286387-26286406 | Msa0676090:intron | 30.0% |
| TAAGATACTCTTCCTATTCA+TGG | + | chr4_4:26286449-26286468 | Msa0676090:intron | 30.0% | |
| AACTGGAAAATAACTTATCC+AGG | + | chr4_4:26286490-26286509 | Msa0676090:intron | 30.0% | |
| TTGACGGTTGAATTATTAAG+GGG | - | chr4_4:26286922-26286941 | None:intergenic | 30.0% | |
| GATACTTCATCAAGAAACAT+TGG | + | chr4_4:26287003-26287022 | Msa0676090:intron | 30.0% | |
| !!! | GAACAATTGTGTGCATTTTT+TGG | + | chr4_4:26287153-26287172 | Msa0676090:intron | 30.0% |
| ! | GAAGATGAAATATTAGCTTG+AGG | - | chr4_4:26287231-26287250 | None:intergenic | 30.0% |
| !! | TGATCTAACAATTTGCTGTT+TGG | + | chr4_4:26287437-26287456 | Msa0676090:intron | 30.0% |
| !! | TAACAATTTGCTGTTTGGAT+TGG | + | chr4_4:26287442-26287461 | Msa0676090:intron | 30.0% |
| TCAGCAAATATTATTAGGCT+AGG | + | chr4_4:26287537-26287556 | Msa0676090:intron | 30.0% | |
| !!! | TTTTTATCGAGTGGTGTTAT+GGG | - | chr4_4:26287634-26287653 | None:intergenic | 30.0% |
| !!! | TTTTTTATCGAGTGGTGTTA+TGG | - | chr4_4:26287635-26287654 | None:intergenic | 30.0% |
| GAATTTATTCTCATCATGTG+TGG | + | chr4_4:26287763-26287782 | Msa0676090:intron | 30.0% | |
| GATAGTTAGGATTATGTCAA+GGG | + | chr4_4:26287821-26287840 | Msa0676090:intron | 30.0% | |
| ! | ATTGAGTCTAGTTTCACTTT+GGG | - | chr4_4:26287851-26287870 | None:intergenic | 30.0% |
| ! | TATTGAGTCTAGTTTCACTT+TGG | - | chr4_4:26287852-26287871 | None:intergenic | 30.0% |
| CTTGAGAAGAGTTTATAAAG+AGG | + | chr4_4:26288014-26288033 | Msa0676090:intron | 30.0% | |
| TTTCTCCTTGTTGAAATTTG+GGG | - | chr4_4:26288085-26288104 | None:intergenic | 30.0% | |
| !!! | AGTCGCTCTCTTATTTTTAT+AGG | - | chr4_4:26288233-26288252 | None:intergenic | 30.0% |
| ! | TTTTCCTTCAATCTTTTGTG+TGG | + | chr4_4:26288306-26288325 | Msa0676090:intron | 30.0% |
| TAAACCACACAAAAGATTGA+AGG | - | chr4_4:26288313-26288332 | None:intergenic | 30.0% | |
| ATCATGTTATGGCAATAGAT+AGG | - | chr4_4:26288338-26288357 | None:intergenic | 30.0% | |
| ACAAATGGAAAAAGACATGT+TGG | - | chr4_4:26288377-26288396 | None:intergenic | 30.0% | |
| ATGGCAAATGTATTGAAAGG+TGG | + | chr4_4:26284000-26284019 | Msa0676090:CDS | 35.0% | |
| TTTGGGTAGGAATGAGTAAT+TGG | - | chr4_4:26284091-26284110 | None:intergenic | 35.0% | |
| AGTGAGAGAAAAGGGAATTT+GGG | - | chr4_4:26284108-26284127 | None:intergenic | 35.0% | |
| AAGAAGAGAGTGAGAGAAAA+GGG | - | chr4_4:26284116-26284135 | None:intergenic | 35.0% | |
| ! | GAAGAAGAAAGAGTGCAAAA+TGG | - | chr4_4:26284174-26284193 | None:intergenic | 35.0% |
| ! | TCATTGTTTTCAACAGCGAT+GGG | - | chr4_4:26284216-26284235 | None:intergenic | 35.0% |
| CTGCAAATAATTCTAGGTTC+AGG | - | chr4_4:26284357-26284376 | None:intergenic | 35.0% | |
| GAACCTAGAATTATTTGCAG+TGG | + | chr4_4:26284357-26284376 | Msa0676090:CDS | 35.0% | |
| AGACCACTGCAAATAATTCT+AGG | - | chr4_4:26284363-26284382 | None:intergenic | 35.0% | |
| AAACCTGAAGTTGTTCAAGA+GGG | - | chr4_4:26284398-26284417 | None:intergenic | 35.0% | |
| GTTCTAACAACTTACCATTG+AGG | - | chr4_4:26284534-26284553 | None:intergenic | 35.0% | |
| ! | TTGTTAGAACTTTTAGGCAC+TGG | + | chr4_4:26284544-26284563 | Msa0676090:intron | 35.0% |
| GATAGCCATTTATTCTTTGG+CGG | + | chr4_4:26284933-26284952 | Msa0676090:intron | 35.0% | |
| ACTCATCTATCAGTATTTGG+TGG | + | chr4_4:26284960-26284979 | Msa0676090:intron | 35.0% | |
| TTCTGTCGAGAATTAGACTA+CGG | - | chr4_4:26285018-26285037 | None:intergenic | 35.0% | |
| CGGGCTTAAGTAATAACAAT+TGG | - | chr4_4:26285044-26285063 | None:intergenic | 35.0% | |
| !! | AATGGAATAGTCTTTTGGGT+TGG | - | chr4_4:26285076-26285095 | None:intergenic | 35.0% |
| ! | CGCTTAATGGAATAGTCTTT+TGG | - | chr4_4:26285081-26285100 | None:intergenic | 35.0% |
| ACCTCATATATGCTCAGAAA+AGG | + | chr4_4:26285245-26285264 | Msa0676090:intron | 35.0% | |
| ! | TCCTTTTCTGAGCATATATG+AGG | - | chr4_4:26285249-26285268 | None:intergenic | 35.0% |
| ! | GTTCATGACTATGTTTCTGT+TGG | - | chr4_4:26285407-26285426 | None:intergenic | 35.0% |
| AAGTTTGCAATAAACCCAAC+AGG | + | chr4_4:26285455-26285474 | Msa0676090:intron | 35.0% | |
| ! | GCTTTGAATAGTTAAGGTCA+GGG | - | chr4_4:26285618-26285637 | None:intergenic | 35.0% |
| ! | TGCTTTGAATAGTTAAGGTC+AGG | - | chr4_4:26285619-26285638 | None:intergenic | 35.0% |
| ! | TGCGATGCTTTGAATAGTTA+AGG | - | chr4_4:26285624-26285643 | None:intergenic | 35.0% |
| AACAAGGCTCTTTGAATGAT+AGG | - | chr4_4:26285738-26285757 | None:intergenic | 35.0% | |
| ATTCAGACTAGGAGTTATGA+TGG | - | chr4_4:26285838-26285857 | None:intergenic | 35.0% | |
| TATTATATCTCTCTCTCCCA+AGG | + | chr4_4:26286306-26286325 | Msa0676090:intron | 35.0% | |
| CCATTATCCTGTTATTCCTT+GGG | - | chr4_4:26286325-26286344 | None:intergenic | 35.0% | |
| ACCATTATCCTGTTATTCCT+TGG | - | chr4_4:26286326-26286345 | None:intergenic | 35.0% | |
| CTTTAGGCATATTTGTGTGA+TGG | + | chr4_4:26286413-26286432 | Msa0676090:intron | 35.0% | |
| CTGACATTCATTAAGTAACC+TGG | - | chr4_4:26286511-26286530 | None:intergenic | 35.0% | |
| AACAGTAAGACACAAATGCA+GGG | + | chr4_4:26286644-26286663 | Msa0676090:intron | 35.0% | |
| ! | AAGAATATGGTTTGGATCTG+AGG | + | chr4_4:26286808-26286827 | Msa0676090:intron | 35.0% |
| AGTAGAGTTATTGCCTGATT+GGG | - | chr4_4:26286866-26286885 | None:intergenic | 35.0% | |
| AAGTAGAGTTATTGCCTGAT+TGG | - | chr4_4:26286867-26286886 | None:intergenic | 35.0% | |
| !!! | TTTTATCGAGTGGTGTTATG+GGG | - | chr4_4:26287633-26287652 | None:intergenic | 35.0% |
| !!! | TTAGGAGGTTTTTTATCGAG+TGG | - | chr4_4:26287643-26287662 | None:intergenic | 35.0% |
| !!! | AGGGAACTTTGTTTTTTAGG+AGG | - | chr4_4:26287658-26287677 | None:intergenic | 35.0% |
| AAAGTTCCCTAAAAGAACAC+AGG | + | chr4_4:26287668-26287687 | Msa0676090:intron | 35.0% | |
| !! | TTGTGCTATTTGTGTTAGCT+TGG | - | chr4_4:26287709-26287728 | None:intergenic | 35.0% |
| GGATAGTTAGGATTATGTCA+AGG | + | chr4_4:26287820-26287839 | Msa0676090:intron | 35.0% | |
| CTAACCAAAGGTCTCAATTT+AGG | - | chr4_4:26287914-26287933 | None:intergenic | 35.0% | |
| GAGAAGAGTTTATAAAGAGG+AGG | + | chr4_4:26288017-26288036 | Msa0676090:intron | 35.0% | |
| CTAACTCATCCTTACAAAAC+CGG | - | chr4_4:26288061-26288080 | None:intergenic | 35.0% | |
| !! | AACTAGTTCTGCAGTTACAA+GGG | - | chr4_4:26288146-26288165 | None:intergenic | 35.0% |
| !! | AAACTAGTTCTGCAGTTACA+AGG | - | chr4_4:26288147-26288166 | None:intergenic | 35.0% |
| !!! | GAACCATCTGTTTTAAGATG+AGG | - | chr4_4:26288463-26288482 | None:intergenic | 35.0% |
| TATTTGCATTCTGCAAAGAC+TGG | - | chr4_4:26288543-26288562 | None:intergenic | 35.0% | |
| AGAGAAAAGGGAATTTGGGT+AGG | - | chr4_4:26284104-26284123 | None:intergenic | 40.0% | |
| GAGTGAGAGAAAAGGGAATT+TGG | - | chr4_4:26284109-26284128 | None:intergenic | 40.0% | |
| GAAGAAGAGAGTGAGAGAAA+AGG | - | chr4_4:26284117-26284136 | None:intergenic | 40.0% | |
| AAATGGAGAGAACCCAGATA+GGG | - | chr4_4:26284157-26284176 | None:intergenic | 40.0% | |
| AAAATGGAGAGAACCCAGAT+AGG | - | chr4_4:26284158-26284177 | None:intergenic | 40.0% | |
| !! | TTCTTCTTCTGAGACAGTCA+CGG | + | chr4_4:26284188-26284207 | Msa0676090:CDS | 40.0% |
| ! | CTCATTGTTTTCAACAGCGA+TGG | - | chr4_4:26284217-26284236 | None:intergenic | 40.0% |
| TGCTGGGTTGCTTGATATAA+GGG | + | chr4_4:26284257-26284276 | Msa0676090:CDS | 40.0% | |
| TTGGTCAGATTGTGAAAGCA+TGG | + | chr4_4:26284280-26284299 | Msa0676090:CDS | 40.0% | |
| GAAACCTGAAGTTGTTCAAG+AGG | - | chr4_4:26284399-26284418 | None:intergenic | 40.0% | |
| TGAAGCCGCCAAAGAATAAA+TGG | - | chr4_4:26284941-26284960 | None:intergenic | 40.0% | |
| CTTTGGATTTCTCAAGCACT+TGG | + | chr4_4:26285172-26285191 | Msa0676090:intron | 40.0% | |
| AAATGCATGTGAGGATAGTC+TGG | + | chr4_4:26285281-26285300 | Msa0676090:intron | 40.0% | |
| TCTCTTAAGTACATGGTCAG+TGG | + | chr4_4:26285319-26285338 | Msa0676090:intron | 40.0% | |
| ATTCAACTCACTGTCCTGTT+GGG | - | chr4_4:26285472-26285491 | None:intergenic | 40.0% | |
| AATTCAACTCACTGTCCTGT+TGG | - | chr4_4:26285473-26285492 | None:intergenic | 40.0% | |
| GGTTTCAACACATGAGAGTT+AGG | - | chr4_4:26285498-26285517 | None:intergenic | 40.0% | |
| CAATTCAGCTCAATAGAGCT+AGG | - | chr4_4:26285519-26285538 | None:intergenic | 40.0% | |
| TTGCCTATCAACATGCAACA+AGG | - | chr4_4:26285754-26285773 | None:intergenic | 40.0% | |
| ! | TTGTTGCATGTTGATAGGCA+AGG | + | chr4_4:26285753-26285772 | Msa0676090:intron | 40.0% |
| ! | GAGTTATGATGGTGTTTGAG+GGG | - | chr4_4:26285827-26285846 | None:intergenic | 40.0% |
| ! | GGAGTTATGATGGTGTTTGA+GGG | - | chr4_4:26285828-26285847 | None:intergenic | 40.0% |
| ! | AGGAGTTATGATGGTGTTTG+AGG | - | chr4_4:26285829-26285848 | None:intergenic | 40.0% |
| ! | AGTATCGAAGGATTCAGACT+AGG | - | chr4_4:26285849-26285868 | None:intergenic | 40.0% |
| GGCTCTCAGAAGAACAAAAA+AGG | + | chr4_4:26286093-26286112 | Msa0676090:intron | 40.0% | |
| CCCAAGGAATAACAGGATAA+TGG | + | chr4_4:26286322-26286341 | Msa0676090:intron | 40.0% | |
| ! | GCCAATCATATGGTCACTTT+AGG | + | chr4_4:26286397-26286416 | Msa0676090:intron | 40.0% |
| GCCTAAAGTGACCATATGAT+TGG | - | chr4_4:26286401-26286420 | None:intergenic | 40.0% | |
| CTGCATTTGTGTCTTACTGT+TGG | - | chr4_4:26286645-26286664 | None:intergenic | 40.0% | |
| CAACAGTAAGACACAAATGC+AGG | + | chr4_4:26286643-26286662 | Msa0676090:intron | 40.0% | |
| ! | TTCTTTCGAATCTGAAGCCA+AGG | + | chr4_4:26286681-26286700 | Msa0676090:CDS | 40.0% |
| CAAGTCTTCAGGAATGTTGA+TGG | + | chr4_4:26286718-26286737 | Msa0676090:CDS | 40.0% | |
| CAACTCCTGGTGAAAGAATA+TGG | + | chr4_4:26286795-26286814 | Msa0676090:intron | 40.0% | |
| CCAAACCATATTCTTTCACC+AGG | - | chr4_4:26286803-26286822 | None:intergenic | 40.0% | |
| CCTGGTGAAAGAATATGGTT+TGG | + | chr4_4:26286800-26286819 | Msa0676090:intron | 40.0% | |
| GTTTGGATCTGAGGAAGAAA+AGG | + | chr4_4:26286817-26286836 | Msa0676090:intron | 40.0% | |
| AGAAAAGGACAATCAACCTG+AGG | + | chr4_4:26286832-26286851 | Msa0676090:intron | 40.0% | |
| AGTTATTGCCTGATTGGGTT+TGG | - | chr4_4:26286861-26286880 | None:intergenic | 40.0% | |
| AAGGTGTGAGATTCATGAAG+TGG | - | chr4_4:26287270-26287289 | None:intergenic | 40.0% | |
| ! | TGTACTCTTTTTCCTCCTTG+CGG | - | chr4_4:26287584-26287603 | None:intergenic | 40.0% |
| ! | GGTGTTCCTGTGTTCTTTTA+GGG | - | chr4_4:26287677-26287696 | None:intergenic | 40.0% |
| ! | TGGTGTTCCTGTGTTCTTTT+AGG | - | chr4_4:26287678-26287697 | None:intergenic | 40.0% |
| TAGGAATAACTCTCGCAACT+AGG | - | chr4_4:26287739-26287758 | None:intergenic | 40.0% | |
| CAACACAATGAAGATGTTGG+AGG | - | chr4_4:26287949-26287968 | None:intergenic | 40.0% | |
| CTCCAACATCTTCATTGTGT+TGG | + | chr4_4:26287947-26287966 | Msa0676090:intron | 40.0% | |
| AGCCAACACAATGAAGATGT+TGG | - | chr4_4:26287952-26287971 | None:intergenic | 40.0% | |
| !! | TCTTCATTGTGTTGGCTTTG+AGG | + | chr4_4:26287955-26287974 | Msa0676090:intron | 40.0% |
| !! | CTTCATTGTGTTGGCTTTGA+GGG | + | chr4_4:26287956-26287975 | Msa0676090:intron | 40.0% |
| !! | TTCATTGTGTTGGCTTTGAG+GGG | + | chr4_4:26287957-26287976 | Msa0676090:intron | 40.0% |
| ! | AGTCTTGTCTAATCCGATGT+GGG | - | chr4_4:26287994-26288013 | None:intergenic | 40.0% |
| !! | CGGTTTTGTAAGGATGAGTT+AGG | + | chr4_4:26288059-26288078 | Msa0676090:intron | 40.0% |
| TTAGGCCCCAAATTTCAACA+AGG | + | chr4_4:26288077-26288096 | Msa0676090:intron | 40.0% | |
| AGAGCGACTTTCATAGACAT+TGG | + | chr4_4:26288244-26288263 | Msa0676090:intron | 40.0% | |
| GAACAAGAGACAAAGACTTG+TGG | - | chr4_4:26288279-26288298 | None:intergenic | 40.0% | |
| CAGCCTCATCTTAAAACAGA+TGG | + | chr4_4:26288457-26288476 | Msa0676090:CDS | 40.0% | |
| ! | AGAACCCAGATAGGGTTTTG+GGG | - | chr4_4:26284149-26284168 | None:intergenic | 45.0% |
| ! | GAGAACCCAGATAGGGTTTT+GGG | - | chr4_4:26284150-26284169 | None:intergenic | 45.0% |
| ! | AGAGAACCCAGATAGGGTTT+TGG | - | chr4_4:26284151-26284170 | None:intergenic | 45.0% |
| CTGCTGGGTTGCTTGATATA+AGG | + | chr4_4:26284256-26284275 | Msa0676090:CDS | 45.0% | |
| GGGTTGCTTGATATAAGGGT+TGG | + | chr4_4:26284261-26284280 | Msa0676090:CDS | 45.0% | |
| TGTCCCTCTTGAACAACTTC+AGG | + | chr4_4:26284392-26284411 | Msa0676090:CDS | 45.0% | |
| TGAGGCAGACAACACCAATT+TGG | - | chr4_4:26284516-26284535 | None:intergenic | 45.0% | |
| !! | ATTGGTGTTGTCTGCCTCAA+TGG | + | chr4_4:26284517-26284536 | Msa0676090:intron | 45.0% |
| ATCGGCGACTTTCACTCTAT+CGG | + | chr4_4:26284892-26284911 | Msa0676090:intron | 45.0% | |
| ACTACGTACAGGCTGGATTA+AGG | - | chr4_4:26284990-26285009 | None:intergenic | 45.0% | |
| !!! | TTTTGGGTTGGCTCTCAACA+CGG | - | chr4_4:26285064-26285083 | None:intergenic | 45.0% |
| !! | TTGAATCTAGCTCTCCAACG+AGG | + | chr4_4:26285536-26285555 | Msa0676090:intron | 45.0% |
| AAGAGTCTCTGCAAACTCGT+GGG | - | chr4_4:26285584-26285603 | None:intergenic | 45.0% | |
| !! | GAGCCTTGTTGCATGTTGAT+AGG | + | chr4_4:26285748-26285767 | Msa0676090:intron | 45.0% |
| ! | TGTTGATAGGCAAGGAAGTG+TGG | + | chr4_4:26285761-26285780 | Msa0676090:intron | 45.0% |
| GTACTGTGATTTCTGACCAG+TGG | + | chr4_4:26286072-26286091 | Msa0676090:intron | 45.0% | |
| ! | TTTGTTCTTCTGAGAGCCAC+TGG | - | chr4_4:26286091-26286110 | None:intergenic | 45.0% |
| TCTCTCTCCCAAGGAATAAC+AGG | + | chr4_4:26286315-26286334 | Msa0676090:intron | 45.0% | |
| CTGAAGCCAAGGAATATGTG+TGG | + | chr4_4:26286692-26286711 | Msa0676090:CDS | 45.0% | |
| TTGACGCCACACATATTCCT+TGG | - | chr4_4:26286701-26286720 | None:intergenic | 45.0% | |
| ! | GTACTCTTTTTCCTCCTTGC+GGG | - | chr4_4:26287583-26287602 | None:intergenic | 45.0% |
| TGGGGTTGTGTCTGTTATTC+TGG | - | chr4_4:26287615-26287634 | None:intergenic | 45.0% | |
| ! | GTGTTAGCTTGGCAGTGTAT+TGG | - | chr4_4:26287698-26287717 | None:intergenic | 45.0% |
| GAATAACTCTCGCAACTAGG+AGG | - | chr4_4:26287736-26287755 | None:intergenic | 45.0% | |
| ATTCTCATCATGTGTGGGTG+TGG | + | chr4_4:26287769-26287788 | Msa0676090:intron | 45.0% | |
| TTCTCATCATGTGTGGGTGT+GGG | + | chr4_4:26287770-26287789 | Msa0676090:intron | 45.0% | |
| CTAGGGGCAGAACACAATTA+AGG | - | chr4_4:26287888-26287907 | None:intergenic | 45.0% | |
| GTCTCAATTTAGGCGACTAG+GGG | - | chr4_4:26287904-26287923 | None:intergenic | 45.0% | |
| GGTCTCAATTTAGGCGACTA+GGG | - | chr4_4:26287905-26287924 | None:intergenic | 45.0% | |
| AGGTCTCAATTTAGGCGACT+AGG | - | chr4_4:26287906-26287925 | None:intergenic | 45.0% | |
| GTCGCCTAAATTGAGACCTT+TGG | + | chr4_4:26287907-26287926 | Msa0676090:intron | 45.0% | |
| CTGCAATGAAGGCTAACCAA+AGG | - | chr4_4:26287926-26287945 | None:intergenic | 45.0% | |
| !! | TCATTGTGTTGGCTTTGAGG+GGG | + | chr4_4:26287958-26287977 | Msa0676090:intron | 45.0% |
| ! | GAGTCTTGTCTAATCCGATG+TGG | - | chr4_4:26287995-26288014 | None:intergenic | 45.0% |
| !! | CCTTACAAAACCGGCTTGTA+AGG | - | chr4_4:26288052-26288071 | None:intergenic | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | + | chr4_4:26288049-26288068 | Msa0676090:intron | 45.0% |
| CATGTTATGCGTACATCTGC+AGG | + | chr4_4:26288505-26288524 | Msa0676090:CDS | 45.0% | |
| !! | TGTTCGTGAGAGTGTTGTGG+TGG | - | chr4_4:26284064-26284083 | None:intergenic | 50.0% |
| !! | CGTTGTTCGTGAGAGTGTTG+TGG | - | chr4_4:26284067-26284086 | None:intergenic | 50.0% |
| AAGCAATCCAAACAGGCCCT+AGG | + | chr4_4:26284801-26284820 | Msa0676090:intron | 50.0% | |
| CTAATGACCTAGGGCCTGTT+TGG | - | chr4_4:26284811-26284830 | None:intergenic | 50.0% | |
| CAAACAGGCCCTAGGTCATT+AGG | + | chr4_4:26284809-26284828 | Msa0676090:intron | 50.0% | |
| CTCTCCCACCTAATGACCTA+GGG | - | chr4_4:26284820-26284839 | None:intergenic | 50.0% | |
| !! | GATGACGTCGGCTCTTAAAG+GGG | - | chr4_4:26284875-26284894 | None:intergenic | 50.0% |
| !! | CGATGACGTCGGCTCTTAAA+GGG | - | chr4_4:26284876-26284895 | None:intergenic | 50.0% |
| ! | CCTTTAAGAGCCGACGTCAT+CGG | + | chr4_4:26284874-26284893 | Msa0676090:intron | 50.0% |
| GACTTTCACTCTATCGGCAG+TGG | + | chr4_4:26284898-26284917 | Msa0676090:intron | 50.0% | |
| CTACGGAAACGACTACGTAC+AGG | - | chr4_4:26285001-26285020 | None:intergenic | 50.0% | |
| !! | TTTGGGTTGGCTCTCAACAC+GGG | - | chr4_4:26285063-26285082 | None:intergenic | 50.0% |
| AGAGTCTCTGCAAACTCGTG+GGG | - | chr4_4:26285583-26285602 | None:intergenic | 50.0% | |
| CAAGAGTCTCTGCAAACTCG+TGG | - | chr4_4:26285585-26285604 | None:intergenic | 50.0% | |
| ! | CAGGATAATGGTGTCTGTCC+TGG | + | chr4_4:26286334-26286353 | Msa0676090:intron | 50.0% |
| ATGTGTGGCGTCAAGTCTTC+AGG | + | chr4_4:26286707-26286726 | Msa0676090:CDS | 50.0% | |
| TTCACCAGGAGTTGCTTCCT+CGG | - | chr4_4:26286789-26286808 | None:intergenic | 50.0% | |
| CAAGATGCACAAAACCCGCA+AGG | + | chr4_4:26287566-26287585 | Msa0676090:intron | 50.0% | |
| GGGGCAGAACACAATTAAGG+CGG | - | chr4_4:26287885-26287904 | None:intergenic | 50.0% | |
| GATGTTGGAGGCTGCAATGA+AGG | - | chr4_4:26287937-26287956 | None:intergenic | 50.0% | |
| ! | GGGTGGATTTAGTCCCACAT+CGG | + | chr4_4:26287978-26287997 | Msa0676090:intron | 50.0% |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | - | chr4_4:26288047-26288066 | None:intergenic | 50.0% |
| GGTTCTTGTACTGCGATGCT+AGG | + | chr4_4:26288478-26288497 | Msa0676090:CDS | 50.0% | |
| !!! | TAGGGTTTTGGGGCGTGAAG+AGG | - | chr4_4:26284139-26284158 | None:intergenic | 55.0% |
| TCACGCCCCAAAACCCTATC+TGG | + | chr4_4:26284141-26284160 | Msa0676090:CDS | 55.0% | |
| CACGCCCCAAAACCCTATCT+GGG | + | chr4_4:26284142-26284161 | Msa0676090:CDS | 55.0% | |
| ACAGGCCCTAGGTCATTAGG+TGG | + | chr4_4:26284812-26284831 | Msa0676090:intron | 55.0% | |
| CAGGCCCTAGGTCATTAGGT+GGG | + | chr4_4:26284813-26284832 | Msa0676090:intron | 55.0% | |
| GCTCTCCCACCTAATGACCT+AGG | - | chr4_4:26284821-26284840 | None:intergenic | 55.0% | |
| !! | CCGATGACGTCGGCTCTTAA+AGG | - | chr4_4:26284877-26284896 | None:intergenic | 55.0% |
| GTGAAAGTCGCCGATGACGT+CGG | - | chr4_4:26284887-26284906 | None:intergenic | 55.0% | |
| GGAAACGACTACGTACAGGC+TGG | - | chr4_4:26284997-26285016 | None:intergenic | 55.0% | |
| CGCAAGTCTCTCCCGCTTAA+TGG | - | chr4_4:26285094-26285113 | None:intergenic | 55.0% | |
| ! | TAGCTCTCCAACGAGGTGTC+AGG | + | chr4_4:26285543-26285562 | Msa0676090:intron | 55.0% |
| ! | AGCTCTCCAACGAGGTGTCA+GGG | + | chr4_4:26285544-26285563 | Msa0676090:intron | 55.0% |
| ! | CAACGAGGTGTCAGGGTTTG+CGG | + | chr4_4:26285551-26285570 | Msa0676090:intron | 55.0% |
| ! | AACGAGGTGTCAGGGTTTGC+GGG | + | chr4_4:26285552-26285571 | Msa0676090:intron | 55.0% |
| TGAACTTCTGTTCCCTCCCG+AGG | + | chr4_4:26286769-26286788 | Msa0676090:intron | 55.0% | |
| TCACCAGGAGTTGCTTCCTC+GGG | - | chr4_4:26286788-26286807 | None:intergenic | 55.0% | |
| TGATTGGGTTTGGCAGCCTC+AGG | - | chr4_4:26286851-26286870 | None:intergenic | 55.0% | |
| TGAGGCTGCCAAACCCAATC+AGG | + | chr4_4:26286850-26286869 | Msa0676090:intron | 55.0% | |
| GATGCACAAAACCCGCAAGG+AGG | + | chr4_4:26287569-26287588 | Msa0676090:intron | 55.0% | |
| !! | TTGTGTTGGCTTTGAGGGGG+TGG | + | chr4_4:26287961-26287980 | Msa0676090:intron | 55.0% |
| GCACTCCTCACCTTACAAGC+CGG | + | chr4_4:26288039-26288058 | Msa0676090:intron | 55.0% | |
| !! | GACGTCGGCTCTTAAAGGGG+TGG | - | chr4_4:26284872-26284891 | None:intergenic | 60.0% |
| CGCAAACCCTGACACCTCGT+TGG | - | chr4_4:26285553-26285572 | None:intergenic | 60.0% | |
| CAGGAGTTGCTTCCTCGGGA+GGG | - | chr4_4:26286784-26286803 | None:intergenic | 60.0% | |
| GGGTGCGGATGGGGATAGTT+AGG | + | chr4_4:26287808-26287827 | Msa0676090:intron | 60.0% | |
| CCAGGAGTTGCTTCCTCGGG+AGG | - | chr4_4:26286785-26286804 | None:intergenic | 65.0% | |
| CCTCCCGAGGAAGCAACTCC+TGG | + | chr4_4:26286782-26286801 | Msa0676090:intron | 65.0% | |
| GCGTGCGTGTGGGTGCGGAT+GGG | + | chr4_4:26287798-26287817 | Msa0676090:intron | 70.0% | |
| CGTGCGTGTGGGTGCGGATG+GGG | + | chr4_4:26287799-26287818 | Msa0676090:intron | 70.0% | |
| TGTGGGTGCGCGCGTGCGTG+TGG | + | chr4_4:26287787-26287806 | Msa0676090:intron | 75.0% | |
| GTGGGTGCGCGCGTGCGTGT+GGG | + | chr4_4:26287788-26287807 | Msa0676090:intron | 75.0% | |
| TGCGCGCGTGCGTGTGGGTG+CGG | + | chr4_4:26287793-26287812 | Msa0676090:intron | 75.0% | |
| CGCGTGCGTGTGGGTGCGGA+TGG | + | chr4_4:26287797-26287816 | Msa0676090:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 26284000 | 26288570 | 26284000 | ID=Msa0676090;Name=Msa0676090 |
| chr4_4 | mRNA | 26284000 | 26288570 | 26284000 | ID=Msa0676090-mRNA-1;Parent=Msa0676090;Name=Msa0676090-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|1|0|0.25|4|0|216 |
| chr4_4 | exon | 26284000 | 26284243 | 26284000 | ID=Msa0676090-mRNA-1:exon:7008;Parent=Msa0676090-mRNA-1 |
| chr4_4 | exon | 26284253 | 26284413 | 26284253 | ID=Msa0676090-mRNA-1:exon:7009;Parent=Msa0676090-mRNA-1 |
| chr4_4 | exon | 26286665 | 26286766 | 26286665 | ID=Msa0676090-mRNA-1:exon:7010;Parent=Msa0676090-mRNA-1 |
| chr4_4 | exon | 26288427 | 26288570 | 26288427 | ID=Msa0676090-mRNA-1:exon:7011;Parent=Msa0676090-mRNA-1 |
| chr4_4 | CDS | 26284000 | 26284243 | 26284000 | ID=Msa0676090-mRNA-1:cds;Parent=Msa0676090-mRNA-1 |
| chr4_4 | CDS | 26284253 | 26284413 | 26284253 | ID=Msa0676090-mRNA-1:cds;Parent=Msa0676090-mRNA-1 |
| chr4_4 | CDS | 26286665 | 26286766 | 26286665 | ID=Msa0676090-mRNA-1:cds;Parent=Msa0676090-mRNA-1 |
| chr4_4 | CDS | 26288427 | 26288570 | 26288427 | ID=Msa0676090-mRNA-1:cds;Parent=Msa0676090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
