Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0676310 | XP_013455479.1 | 76.744 | 258 | 17 | 3 | 1 | 216 | 1 | 257 | 7.04e-115 | 338 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0676310 | sp|P31230|AIMP1_MOUSE | 44.138 | 145 | 54 | 1 | 74 | 191 | 140 | 284 | 7.85e-31 | 118 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0676310 | A0A072UUH4 | 76.744 | 258 | 17 | 3 | 1 | 216 | 1 | 257 | 3.36e-115 | 338 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026780 | Msa0676310 | -0.804529 | 2.068316e-49 | -8.615850e-47 |
| Msa0037650 | Msa0676310 | 0.814454 | 1.527897e-51 | -8.615850e-47 |
| Msa0037780 | Msa0676310 | 0.828451 | 8.927178e-55 | -8.615850e-47 |
| Msa0042950 | Msa0676310 | 0.801974 | 6.988505e-49 | -8.615850e-47 |
| Msa0069150 | Msa0676310 | 0.820951 | 5.229716e-53 | -8.615850e-47 |
| Msa0075990 | Msa0676310 | 0.802064 | 6.698892e-49 | -8.615850e-47 |
| Msa0092480 | Msa0676310 | 0.986689 | 1.237427e-167 | -8.615850e-47 |
| Msa0616890 | Msa0676310 | 0.808187 | 3.502815e-50 | -8.615850e-47 |
| Msa0628440 | Msa0676310 | 0.809704 | 1.659234e-50 | -8.615850e-47 |
| Msa0646030 | Msa0676310 | 0.813976 | 1.948889e-51 | -8.615850e-47 |
| Msa0646410 | Msa0676310 | 0.825045 | 5.805770e-54 | -8.615850e-47 |
| Msa0651870 | Msa0676310 | -0.812423 | 4.272098e-51 | -8.615850e-47 |
| Msa0651890 | Msa0676310 | -0.811302 | 7.493944e-51 | -8.615850e-47 |
| Msa0676090 | Msa0676310 | 0.923149 | 3.882692e-89 | -8.615850e-47 |
| Msa0676310 | Msa0676570 | 0.803011 | 4.273041e-49 | -8.615850e-47 |
| Msa0676310 | Msa0693050 | 0.813265 | 2.793161e-51 | -8.615850e-47 |
| Msa0676310 | Msa0701800 | 0.811639 | 6.329762e-51 | -8.615850e-47 |
| Msa0676310 | Msa0748480 | -0.800345 | 1.505742e-48 | -8.615850e-47 |
| Msa0676310 | Msa0807870 | 0.812524 | 4.060899e-51 | -8.615850e-47 |
| Msa0676310 | Msa0979020 | 0.812472 | 4.167817e-51 | -8.615850e-47 |
| Msa0676310 | Msa1029030 | 0.823192 | 1.580717e-53 | -8.615850e-47 |
| Msa0676310 | Msa1039190 | 0.814763 | 1.305532e-51 | -8.615850e-47 |
| Msa0676310 | Msa1063590 | 0.803260 | 3.794434e-49 | -8.615850e-47 |
| Msa0676310 | Msa1074210 | -0.817559 | 3.097203e-52 | -8.615850e-47 |
| Msa0676310 | Msa1080610 | 0.810578 | 1.075301e-50 | -8.615850e-47 |
| Msa0676310 | Msa1080680 | 0.811010 | 8.670917e-51 | -8.615850e-47 |
| Msa0676310 | Msa1081520 | 0.806949 | 6.417296e-50 | -8.615850e-47 |
| Msa0676310 | Msa1085610 | 0.819909 | 9.066364e-53 | -8.615850e-47 |
| Msa0676310 | Msa1087520 | 0.820180 | 7.860668e-53 | -8.615850e-47 |
| Msa0676310 | Msa1128610 | 0.810450 | 1.145528e-50 | -8.615850e-47 |
| Msa0676310 | Msa1129300 | 0.820309 | 7.340620e-53 | -8.615850e-47 |
| Msa0676310 | Msa1131680 | -0.830884 | 2.283831e-55 | -8.615850e-47 |
| Msa0676310 | Msa1143810 | 0.839347 | 1.672682e-57 | -8.615850e-47 |
| Msa0676310 | Msa1167150 | 0.812447 | 4.220976e-51 | -8.615850e-47 |
| Msa0676310 | Msa1190100 | 0.829679 | 4.498875e-55 | -8.615850e-47 |
| Msa0676310 | Msa1202710 | 0.803552 | 3.300683e-49 | -8.615850e-47 |
| Msa0676310 | Msa1251410 | -0.802253 | 6.125454e-49 | -8.615850e-47 |
| Msa0676310 | Msa1254360 | 0.816781 | 4.634232e-52 | -8.615850e-47 |
| Msa0676310 | Msa1258030 | 0.860212 | 2.418258e-63 | -8.615850e-47 |
| Msa0676310 | Msa1303620 | 0.805107 | 1.566228e-49 | -8.615850e-47 |
| Msa0676310 | Msa1325560 | 0.800668 | 1.293562e-48 | -8.615850e-47 |
| Msa0676310 | Msa1326780 | 0.831199 | 1.911451e-55 | -8.615850e-47 |
| Msa0676310 | Msa1341390 | 0.807098 | 5.967283e-50 | -8.615850e-47 |
| Msa0676310 | Msa1345540 | 0.816064 | 6.704631e-52 | -8.615850e-47 |
| Msa0676310 | Msa1361670 | 0.813487 | 2.496839e-51 | -8.615850e-47 |
| Msa0676310 | Msa1364350 | 0.805967 | 1.033730e-49 | -8.615850e-47 |
| Msa0676310 | Msa1375970 | 0.839739 | 1.323142e-57 | -8.615850e-47 |
| Msa0676310 | Msa1375980 | 0.805356 | 1.388789e-49 | -8.615850e-47 |
| Msa0676310 | Msa1377980 | 0.812639 | 3.830749e-51 | -8.615850e-47 |
| Msa0676310 | Msa1398450 | 0.824633 | 7.261063e-54 | -8.615850e-47 |
| Msa0676310 | Msa1401640 | 0.830948 | 2.202458e-55 | -8.615850e-47 |
| Msa0676310 | Msa1408280 | 0.815122 | 1.086847e-51 | -8.615850e-47 |
| Msa0676310 | Msa1411930 | 0.829065 | 6.339472e-55 | -8.615850e-47 |
| Msa0676310 | Msa1431510 | 0.805016 | 1.636156e-49 | -8.615850e-47 |
| Msa0676310 | Msa1456180 | 0.834510 | 2.875197e-56 | -8.615850e-47 |
| Msa0676310 | Msa1457390 | 0.813990 | 1.935227e-51 | -8.615850e-47 |
| Msa0676310 | Msa1459130 | 0.808516 | 2.980691e-50 | -8.615850e-47 |
| Msa0142340 | Msa0676310 | 0.820031 | 8.501309e-53 | -8.615850e-47 |
| Msa0178840 | Msa0676310 | 0.801579 | 8.424877e-49 | -8.615850e-47 |
| Msa0186400 | Msa0676310 | 0.804179 | 2.446298e-49 | -8.615850e-47 |
| Msa0187590 | Msa0676310 | 0.809068 | 2.271810e-50 | -8.615850e-47 |
| Msa0195810 | Msa0676310 | 0.841463 | 4.679293e-58 | -8.615850e-47 |
| Msa0367540 | Msa0676310 | 0.834905 | 2.286607e-56 | -8.615850e-47 |
| Msa0372570 | Msa0676310 | 0.800484 | 1.410183e-48 | -8.615850e-47 |
| Msa0373120 | Msa0676310 | 0.850499 | 1.632709e-60 | -8.615850e-47 |
| Msa0392120 | Msa0676310 | 0.800928 | 1.145054e-48 | -8.615850e-47 |
| Msa0415160 | Msa0676310 | 0.827554 | 1.467424e-54 | -8.615850e-47 |
| Msa0419150 | Msa0676310 | 0.804351 | 2.252334e-49 | -8.615850e-47 |
| Msa0460170 | Msa0676310 | 0.842370 | 2.695185e-58 | -8.615850e-47 |
| Msa0464980 | Msa0676310 | 0.805759 | 1.143096e-49 | -8.615850e-47 |
| Msa0238950 | Msa0676310 | -0.817470 | 3.242751e-52 | -8.615850e-47 |
| Msa0260640 | Msa0676310 | 0.803006 | 4.283300e-49 | -8.615850e-47 |
| Msa0275250 | Msa0676310 | 0.838751 | 2.387731e-57 | -8.615850e-47 |
| Msa0308750 | Msa0676310 | -0.808264 | 3.373078e-50 | -8.615850e-47 |
| Msa0315720 | Msa0676310 | 0.830427 | 2.955434e-55 | -8.615850e-47 |
| Msa0316740 | Msa0676310 | -0.808449 | 3.080129e-50 | -8.615850e-47 |
| Msa0326170 | Msa0676310 | 0.814095 | 1.833971e-51 | -8.615850e-47 |
| Msa0326630 | Msa0676310 | 0.820961 | 5.201864e-53 | -8.615850e-47 |
| Msa0327990 | Msa0676310 | 0.828416 | 9.102550e-55 | -8.615850e-47 |
| Msa0500610 | Msa0676310 | 0.829122 | 6.142069e-55 | -8.615850e-47 |
| Msa0500700 | Msa0676310 | 0.815050 | 1.127473e-51 | -8.615850e-47 |
| Msa0512950 | Msa0676310 | 0.816579 | 5.142231e-52 | -8.615850e-47 |
| Msa0523420 | Msa0676310 | 0.813462 | 2.528882e-51 | -8.615850e-47 |
| Msa0531270 | Msa0676310 | 0.824146 | 9.454460e-54 | -8.615850e-47 |
| Msa0569580 | Msa0676310 | 0.810199 | 1.298233e-50 | -8.615850e-47 |
| Msa0572730 | Msa0676310 | 0.808831 | 2.552959e-50 | -8.615850e-47 |
| Msa0576080 | Msa0676310 | 0.816099 | 6.584128e-52 | -8.615850e-47 |
| Msa0576090 | Msa0676310 | 0.818998 | 1.462434e-52 | -8.615850e-47 |
| Msa0588110 | Msa0676310 | 0.855436 | 6.318213e-62 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0676310 | MtrunA17_Chr4g0019821 | 76.744 | 258 | 17 | 3 | 1 | 216 | 1 | 257 | 6.47e-119 | 338 |
| Msa0676310 | MtrunA17_Chr4g0068561 | 40.994 | 161 | 64 | 2 | 79 | 210 | 34 | 192 | 4.91e-33 | 117 |
| Msa0676310 | MtrunA17_Chr4g0039621 | 40.506 | 158 | 65 | 1 | 87 | 215 | 648 | 805 | 4.67e-30 | 117 |
| Msa0676310 | MtrunA17_Chr3g0128701 | 35.220 | 159 | 72 | 3 | 76 | 203 | 218 | 376 | 7.04e-19 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0676310 | AT3G59980.1 | 54.455 | 202 | 47 | 3 | 59 | 216 | 73 | 273 | 1.99e-64 | 201 |
| Msa0676310 | AT4G13780.1 | 37.349 | 166 | 75 | 1 | 79 | 215 | 631 | 796 | 3.77e-25 | 103 |
| Msa0676310 | AT2G40660.1 | 43.023 | 86 | 49 | 0 | 86 | 171 | 231 | 316 | 1.29e-16 | 77.8 |
Find 40 sgRNAs with CRISPR-Local
Find 301 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGTGAGAGAAAAGGGAATT+TGG | 0.204168 | 4_4:-26886194 | None:intergenic |
| TCACGCCCCAAAACCCTATC+TGG | 0.209394 | 4_4:+26886229 | Msa0676310:CDS |
| CTGCTGGGTTGCTTGATATA+AGG | 0.220534 | 4_4:+26886344 | Msa0676310:CDS |
| TTTGGGTAGGAATGAGTAAT+TGG | 0.260789 | 4_4:-26886176 | None:intergenic |
| GAAGAAGAAAGAGTGCAAAA+TGG | 0.289404 | 4_4:-26886259 | None:intergenic |
| TGTCCCTCTTGAACAACTTC+AGG | 0.318121 | 4_4:+26886480 | Msa0676310:CDS |
| AGACCACTGCAAATAATTCT+AGG | 0.337017 | 4_4:-26886448 | None:intergenic |
| AGAGAACCCAGATAGGGTTT+TGG | 0.349454 | 4_4:-26886236 | None:intergenic |
| AGTGAGAGAAAAGGGAATTT+GGG | 0.353893 | 4_4:-26886193 | None:intergenic |
| TGCTGGGTTGCTTGATATAA+GGG | 0.359660 | 4_4:+26886345 | Msa0676310:CDS |
| ATGCGTGGCGTCAAGTCTTC+AGG | 0.362081 | 4_4:+26888795 | Msa0676310:CDS |
| AAGAAGAGAGTGAGAGAAAA+GGG | 0.367952 | 4_4:-26886201 | None:intergenic |
| GAAGAAGAGAGTGAGAGAAA+AGG | 0.375038 | 4_4:-26886202 | None:intergenic |
| TATGTTGAAGAGGTTGATAT+TGG | 0.447688 | 4_4:+26886415 | Msa0676310:CDS |
| CAAGTCTTCAGGAATGTTGA+TGG | 0.466166 | 4_4:+26888806 | Msa0676310:CDS |
| CTGCAAATAATTCTAGGTTC+AGG | 0.473329 | 4_4:-26886442 | None:intergenic |
| AGTAGTATTAAAGATACTGC+TGG | 0.483323 | 4_4:+26886328 | Msa0676310:intron |
| TTGACGCCACGCATATTCCT+TGG | 0.486119 | 4_4:-26888786 | None:intergenic |
| CATGTTATGCGTACATCTGC+AGG | 0.488090 | 4_4:+26890469 | Msa0676310:CDS |
| AAAATGGAGAGAACCCAGAT+AGG | 0.491884 | 4_4:-26886243 | None:intergenic |
| TGAATCACTTTATGTTGAAG+AGG | 0.510641 | 4_4:+26886405 | Msa0676310:CDS |
| TTCTTTCGAATCTGAAGCCA+AGG | 0.511951 | 4_4:+26888769 | Msa0676310:CDS |
| TATTTGCATTCTGCAAAGAC+TGG | 0.514661 | 4_4:-26890504 | None:intergenic |
| AAATGGAGAGAACCCAGATA+GGG | 0.556896 | 4_4:-26886242 | None:intergenic |
| CAGCCTCATCTTAAAACAGA+TGG | 0.557780 | 4_4:+26890421 | Msa0676310:CDS |
| TTGGTCAGATTGTGAAAGCA+TGG | 0.562162 | 4_4:+26886368 | Msa0676310:CDS |
| TTCTTCTTCTGAGACAGTCA+CGG | 0.562195 | 4_4:+26886276 | Msa0676310:CDS |
| AAAATGGCAAATGTATTGAA+AGG | 0.563636 | 4_4:+26886085 | None:intergenic |
| CACGCCCCAAAACCCTATCT+GGG | 0.569575 | 4_4:+26886230 | Msa0676310:CDS |
| AGAGAAAAGGGAATTTGGGT+AGG | 0.575873 | 4_4:-26886189 | None:intergenic |
| GGTTCTTGTACTGCGATGCT+AGG | 0.576090 | 4_4:+26890442 | Msa0676310:CDS |
| GAAACCTGAAGTTGTTCAAG+AGG | 0.586172 | 4_4:-26886484 | None:intergenic |
| GTAGTATTAAAGATACTGCT+GGG | 0.595902 | 4_4:+26886329 | Msa0676310:intron |
| GAACCTAGAATTATTTGCAG+TGG | 0.609307 | 4_4:+26886445 | Msa0676310:CDS |
| CGTTGTTCGTGAGAGTGTTG+TGG | 0.624714 | 4_4:-26886152 | None:intergenic |
| ATGGCAAATGTATTGAAAGG+TGG | 0.625147 | 4_4:+26886088 | Msa0676310:CDS |
| GGGTTGCTTGATATAAGGGT+TGG | 0.626322 | 4_4:+26886349 | Msa0676310:CDS |
| AAACCTGAAGTTGTTCAAGA+GGG | 0.658505 | 4_4:-26886483 | None:intergenic |
| CTGAAGCCAAGGAATATGCG+TGG | 0.688927 | 4_4:+26888780 | Msa0676310:CDS |
| TGTTCGTGAGAGTGTTGTGG+TGG | 0.704660 | 4_4:-26886149 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTTTTTTATGAATTTTTTT+TGG | + | chr4_4:26886510-26886529 | Msa0676310:intron | 10.0% |
| !!! | ATTGAAATTATGTTTTTTAT+TGG | + | chr4_4:26886539-26886558 | Msa0676310:intron | 10.0% |
| !!! | AAAATATCTTTTACTAATAT+CGG | + | chr4_4:26887965-26887984 | Msa0676310:intron | 10.0% |
| !!! | ATTTTTATTAAATAACATGT+TGG | - | chr4_4:26888293-26888312 | None:intergenic | 10.0% |
| !!! | AATACTAATAAATTTGTTTA+AGG | + | chr4_4:26888463-26888482 | Msa0676310:intron | 10.0% |
| !!! | AAAAAGAATTTTTAATTTGA+CGG | - | chr4_4:26889026-26889045 | None:intergenic | 10.0% |
| !!! | ATTTTCTTTCAAAAAAAAAA+AGG | - | chr4_4:26889377-26889396 | None:intergenic | 10.0% |
| !! | GTATATAAAAATATTCAATG+CGG | - | chr4_4:26887214-26887233 | None:intergenic | 15.0% |
| !!! | ATATTTTTATATACTTGATG+TGG | + | chr4_4:26887220-26887239 | Msa0676310:intron | 15.0% |
| !!! | TATTTTTATATACTTGATGT+GGG | + | chr4_4:26887221-26887240 | Msa0676310:intron | 15.0% |
| !! | ATATATGAGGTATATTTAAA+GGG | - | chr4_4:26887324-26887343 | None:intergenic | 15.0% |
| !! | TAAACATAAATTTAGAAATG+AGG | - | chr4_4:26888328-26888347 | None:intergenic | 15.0% |
| !!! | TCTTTTTATTTAAATTATCC+AGG | - | chr4_4:26888443-26888462 | None:intergenic | 15.0% |
| !! | AAAGAATATTAAGTTACAAA+TGG | - | chr4_4:26890356-26890375 | None:intergenic | 15.0% |
| !! | TTCAATATGGAATTTAATTG+TGG | + | chr4_4:26886577-26886596 | Msa0676310:intron | 20.0% |
| !! | AAATTCTCCAAAATAGTTTA+TGG | - | chr4_4:26886766-26886785 | None:intergenic | 20.0% |
| !! | CATATATGAGGTATATTTAA+AGG | - | chr4_4:26887325-26887344 | None:intergenic | 20.0% |
| !! | ATTGCAAAACTAAATTTCAA+AGG | + | chr4_4:26887726-26887745 | Msa0676310:intron | 20.0% |
| !!! | TTTTATAAAAACAGTATCGA+AGG | - | chr4_4:26887949-26887968 | None:intergenic | 20.0% |
| !!! | TTGTTTTAATTGAAGATTTG+TGG | + | chr4_4:26888004-26888023 | Msa0676310:intron | 20.0% |
| !! | ACAGTTCAAATATTAAAGTT+TGG | - | chr4_4:26888223-26888242 | None:intergenic | 20.0% |
| !! | TAAGCATACAACAAATATTA+AGG | - | chr4_4:26888358-26888377 | None:intergenic | 20.0% |
| !! | ATGAAAAATTAACCATGAAT+AGG | - | chr4_4:26888552-26888571 | None:intergenic | 20.0% |
| !!! | TAATTTTTCATATGCAAAAC+TGG | + | chr4_4:26888561-26888580 | Msa0676310:intron | 20.0% |
| !! | ATTAAAATGTAAGTTCTATG+AGG | + | chr4_4:26888628-26888647 | Msa0676310:intron | 20.0% |
| !! | ATTAATTGCAAAACATAAAG+TGG | - | chr4_4:26888657-26888676 | None:intergenic | 20.0% |
| !!! | TGCAATTAATATATTTGTTG+AGG | + | chr4_4:26888667-26888686 | Msa0676310:intron | 20.0% |
| !! | AATGAATTCACAAAGTAAAT+GGG | - | chr4_4:26889152-26889171 | None:intergenic | 20.0% |
| !! | AAATGAATTCACAAAGTAAA+TGG | - | chr4_4:26889153-26889172 | None:intergenic | 20.0% |
| !!! | TTCATTTTAACTTGCTATTA+AGG | - | chr4_4:26889406-26889425 | None:intergenic | 20.0% |
| !!! | TTGCTGATTCAAAAAAAAAA+AGG | - | chr4_4:26889488-26889507 | None:intergenic | 20.0% |
| !! | TTGAATCAGCAAATATTATT+AGG | + | chr4_4:26889496-26889515 | Msa0676310:intron | 20.0% |
| !! | TATTAGAGTAATAGACTAAT+AGG | + | chr4_4:26890133-26890152 | Msa0676310:intron | 20.0% |
| !! | ATTAGAGTAATAGACTAATA+GGG | + | chr4_4:26890134-26890153 | Msa0676310:intron | 20.0% |
| !! | ACTAATGAATTATCATGTTA+TGG | - | chr4_4:26890313-26890332 | None:intergenic | 20.0% |
| !! | AGATACAAAAGAAAAAGATA+TGG | + | chr4_4:26890389-26890408 | Msa0676310:intron | 20.0% |
| !! | GATACAAAAGAAAAAGATAT+GGG | + | chr4_4:26890390-26890409 | Msa0676310:intron | 20.0% |
| !! | TTTTTATTGGCGCATTTTAT+CGG | + | chr4_4:26886552-26886571 | Msa0676310:intron | 25.0% |
| !! | CATTTTATCGGATTTCAATA+TGG | + | chr4_4:26886564-26886583 | Msa0676310:intron | 25.0% |
| ! | AATTTAATTGTGGACCAAAT+TGG | + | chr4_4:26886587-26886606 | Msa0676310:intron | 25.0% |
| !!! | GTTGTTTCCATAAACTATTT+TGG | + | chr4_4:26886756-26886775 | Msa0676310:intron | 25.0% |
| ! | TATGACTCAAATAAGTCATA+AGG | - | chr4_4:26886931-26886950 | None:intergenic | 25.0% |
| !!! | GTTTTAATCTCTTAAGTACA+TGG | + | chr4_4:26887400-26887419 | Msa0676310:intron | 25.0% |
| ! | AACTAAATTTCAAAGGAATC+TGG | + | chr4_4:26887733-26887752 | Msa0676310:intron | 25.0% |
| !! | GAATCTGGAATTAAAACATA+TGG | + | chr4_4:26887748-26887767 | Msa0676310:intron | 25.0% |
| !! | TGCTGTATAGTATTTTTCTA+TGG | + | chr4_4:26888127-26888146 | Msa0676310:intron | 25.0% |
| !! | AATATTAAAGTTTGGAGTCT+TGG | - | chr4_4:26888215-26888234 | None:intergenic | 25.0% |
| ! | GTATGCTTATGTATTTAGAA+AGG | + | chr4_4:26888369-26888388 | Msa0676310:intron | 25.0% |
| ! | ACACAAAAACACAAATATGA+TGG | - | chr4_4:26888701-26888720 | None:intergenic | 25.0% |
| ! | TTTGACGGTTGAATTATTAA+GGG | - | chr4_4:26889011-26889030 | None:intergenic | 25.0% |
| ! | ATTTGACGGTTGAATTATTA+AGG | - | chr4_4:26889012-26889031 | None:intergenic | 25.0% |
| ! | ATGAATTCACAAAGTAAATG+GGG | - | chr4_4:26889151-26889170 | None:intergenic | 25.0% |
| !!! | GTTAATTTTACTTGCTAAGA+AGG | + | chr4_4:26889198-26889217 | Msa0676310:intron | 25.0% |
| !!! | TTTAGGGAACTTTGTTTTTT+AGG | - | chr4_4:26889625-26889644 | None:intergenic | 25.0% |
| ! | GATGAGAATAAATTCACTAT+AGG | - | chr4_4:26889722-26889741 | None:intergenic | 25.0% |
| !! | ATTGAGTCTAGTTTCAATTT+GGG | - | chr4_4:26889815-26889834 | None:intergenic | 25.0% |
| !! | TATTGAGTCTAGTTTCAATT+TGG | - | chr4_4:26889816-26889835 | None:intergenic | 25.0% |
| ! | TGAAACTAGACTCAATAATT+TGG | + | chr4_4:26889819-26889838 | Msa0676310:intron | 25.0% |
| !! | TTTTCTCCTTGTTGAAATTT+GGG | - | chr4_4:26890050-26890069 | None:intergenic | 25.0% |
| !! | ATTTTCTCCTTGTTGAAATT+TGG | - | chr4_4:26890051-26890070 | None:intergenic | 25.0% |
| ! | AAATTTCAACAAGGAGAAAA+TGG | + | chr4_4:26890050-26890069 | Msa0676310:intron | 25.0% |
| ! | AATTTCAACAAGGAGAAAAT+GGG | + | chr4_4:26890051-26890070 | Msa0676310:intron | 25.0% |
| ! | TACAAGGGAATACAAAAAAA+GGG | - | chr4_4:26890095-26890114 | None:intergenic | 25.0% |
| ! | TTACAAGGGAATACAAAAAA+AGG | - | chr4_4:26890096-26890115 | None:intergenic | 25.0% |
| ! | AAAGAAAAAGATATGGGAAT+TGG | + | chr4_4:26890396-26890415 | Msa0676310:CDS | 25.0% |
| AGTAGTATTAAAGATACTGC+TGG | + | chr4_4:26886328-26886347 | Msa0676310:intron | 30.0% | |
| GTAGTATTAAAGATACTGCT+GGG | + | chr4_4:26886329-26886348 | Msa0676310:intron | 30.0% | |
| TGAATCACTTTATGTTGAAG+AGG | + | chr4_4:26886405-26886424 | Msa0676310:CDS | 30.0% | |
| !! | TATGTTGAAGAGGTTGATAT+TGG | + | chr4_4:26886415-26886434 | Msa0676310:CDS | 30.0% |
| ! | GGTAAGTTGTTAGAACTTTT+AGG | + | chr4_4:26886626-26886645 | Msa0676310:intron | 30.0% |
| ! | ATATGTTTTGTGACACTGTT+TGG | - | chr4_4:26886848-26886867 | None:intergenic | 30.0% |
| TGAAATAAAGCAATCCAAAC+AGG | + | chr4_4:26886882-26886901 | Msa0676310:intron | 30.0% | |
| AAGAATAAATGGCTATCACT+AGG | - | chr4_4:26887018-26887037 | None:intergenic | 30.0% | |
| AGTGATAGCCATTTATTCTT+TGG | + | chr4_4:26887018-26887037 | Msa0676310:intron | 30.0% | |
| TTCACTCATCTATCAGTATT+TGG | + | chr4_4:26887045-26887064 | Msa0676310:intron | 30.0% | |
| ! | GCTTAATGGAATAGTCTTTT+GGG | - | chr4_4:26887168-26887187 | None:intergenic | 30.0% |
| CAAAAGACTATTCCATTAAG+CGG | + | chr4_4:26887167-26887186 | Msa0676310:intron | 30.0% | |
| AAAAGACTATTCCATTAAGC+GGG | + | chr4_4:26887168-26887187 | Msa0676310:intron | 30.0% | |
| AAATATTCAATGCGGTACTT+AGG | - | chr4_4:26887206-26887225 | None:intergenic | 30.0% | |
| GACTCATAACATAAGTACTT+TGG | + | chr4_4:26887243-26887262 | Msa0676310:intron | 30.0% | |
| TGATTCAATTTCTGACTGAT+CGG | + | chr4_4:26887287-26887306 | Msa0676310:intron | 30.0% | |
| AATCTTCAAAAATGCATGTG+AGG | + | chr4_4:26887360-26887379 | Msa0676310:intron | 30.0% | |
| ! | TTTGATTTCTGACATATGCA+AGG | + | chr4_4:26887430-26887449 | Msa0676310:intron | 30.0% |
| ! | TGCAATGCTTTGAATAGTTA+AGG | - | chr4_4:26887712-26887731 | None:intergenic | 30.0% |
| ! | TCAGCTAATATTTGGAATGA+TGG | - | chr4_4:26887790-26887809 | None:intergenic | 30.0% |
| CTTTCACTTCAGCTAATATT+TGG | - | chr4_4:26887798-26887817 | None:intergenic | 30.0% | |
| ! | TTTGTTTAAGGCCAATCATA+TGG | + | chr4_4:26888475-26888494 | Msa0676310:intron | 30.0% |
| TAAGATACTCTTCCTATTCA+TGG | + | chr4_4:26888537-26888556 | Msa0676310:intron | 30.0% | |
| AACTGGAAAATAACTTATCC+AGG | + | chr4_4:26888578-26888597 | Msa0676310:intron | 30.0% | |
| TTGACGGTTGAATTATTAAG+GGG | - | chr4_4:26889010-26889029 | None:intergenic | 30.0% | |
| GATACTTCATCAAGAAACAT+TGG | + | chr4_4:26889091-26889110 | Msa0676310:intron | 30.0% | |
| !!! | GAACAATTGTGTGCATTTTT+TGG | + | chr4_4:26889241-26889260 | Msa0676310:intron | 30.0% |
| ! | GAAGATGAAATATTAGCTTG+AGG | - | chr4_4:26889319-26889338 | None:intergenic | 30.0% |
| TCAGCAAATATTATTAGGCT+AGG | + | chr4_4:26889501-26889520 | Msa0676310:intron | 30.0% | |
| !!! | TTTTTATCGAGTGGTGTTAT+GGG | - | chr4_4:26889598-26889617 | None:intergenic | 30.0% |
| !!! | TTTTTTATCGAGTGGTGTTA+TGG | - | chr4_4:26889599-26889618 | None:intergenic | 30.0% |
| GATAGTTAGGATTATGTCAA+GGG | + | chr4_4:26889785-26889804 | Msa0676310:intron | 30.0% | |
| CTTGAGAAGAGTTTATAAAG+AGG | + | chr4_4:26889978-26889997 | Msa0676310:intron | 30.0% | |
| TTTCTCCTTGTTGAAATTTG+GGG | - | chr4_4:26890049-26890068 | None:intergenic | 30.0% | |
| !!! | AGTCGCTCTCTTATTTTTAT+AGG | - | chr4_4:26890197-26890216 | None:intergenic | 30.0% |
| ! | TTTTCCTTCAATCTTTTGTG+TGG | + | chr4_4:26890270-26890289 | Msa0676310:intron | 30.0% |
| TAAACCACACAAAAGATTGA+AGG | - | chr4_4:26890277-26890296 | None:intergenic | 30.0% | |
| ATCATGTTATGGCAATAGAT+AGG | - | chr4_4:26890302-26890321 | None:intergenic | 30.0% | |
| ACAAATGGAAAAAGACATGT+TGG | - | chr4_4:26890341-26890360 | None:intergenic | 30.0% | |
| ATGGCAAATGTATTGAAAGG+TGG | + | chr4_4:26886088-26886107 | Msa0676310:CDS | 35.0% | |
| TTTGGGTAGGAATGAGTAAT+TGG | - | chr4_4:26886179-26886198 | None:intergenic | 35.0% | |
| AGTGAGAGAAAAGGGAATTT+GGG | - | chr4_4:26886196-26886215 | None:intergenic | 35.0% | |
| AAGAAGAGAGTGAGAGAAAA+GGG | - | chr4_4:26886204-26886223 | None:intergenic | 35.0% | |
| ! | GAAGAAGAAAGAGTGCAAAA+TGG | - | chr4_4:26886262-26886281 | None:intergenic | 35.0% |
| ! | TCATTGTTTTCAACAGCGAT+GGG | - | chr4_4:26886304-26886323 | None:intergenic | 35.0% |
| CTGCAAATAATTCTAGGTTC+AGG | - | chr4_4:26886445-26886464 | None:intergenic | 35.0% | |
| GAACCTAGAATTATTTGCAG+TGG | + | chr4_4:26886445-26886464 | Msa0676310:CDS | 35.0% | |
| AGACCACTGCAAATAATTCT+AGG | - | chr4_4:26886451-26886470 | None:intergenic | 35.0% | |
| AAACCTGAAGTTGTTCAAGA+GGG | - | chr4_4:26886486-26886505 | None:intergenic | 35.0% | |
| GTTCTAACAACTTACCATTG+AGG | - | chr4_4:26886622-26886641 | None:intergenic | 35.0% | |
| ! | TTGTTAGAACTTTTAGGCAC+TGG | + | chr4_4:26886632-26886651 | Msa0676310:intron | 35.0% |
| GATAGCCATTTATTCTTTGG+CGG | + | chr4_4:26887021-26887040 | Msa0676310:intron | 35.0% | |
| ACTCATCTATCAGTATTTGG+TGG | + | chr4_4:26887048-26887067 | Msa0676310:intron | 35.0% | |
| TTCTGTCGAGAATTAGACTA+CGG | - | chr4_4:26887106-26887125 | None:intergenic | 35.0% | |
| CGGGCTTAAGTAATAACAAT+TGG | - | chr4_4:26887132-26887151 | None:intergenic | 35.0% | |
| !! | AATGGAATAGTCTTTTGGGT+TGG | - | chr4_4:26887164-26887183 | None:intergenic | 35.0% |
| ! | CGCTTAATGGAATAGTCTTT+TGG | - | chr4_4:26887169-26887188 | None:intergenic | 35.0% |
| ACCTCATATATGCTCAGAAA+AGG | + | chr4_4:26887333-26887352 | Msa0676310:intron | 35.0% | |
| ! | TCCTTTTCTGAGCATATATG+AGG | - | chr4_4:26887337-26887356 | None:intergenic | 35.0% |
| ! | GTTCATGACTATGTTTCTGT+TGG | - | chr4_4:26887495-26887514 | None:intergenic | 35.0% |
| AAGTTTGCAATAAACCCAAC+AGG | + | chr4_4:26887543-26887562 | Msa0676310:intron | 35.0% | |
| ! | GCTTTGAATAGTTAAGGTCA+GGG | - | chr4_4:26887706-26887725 | None:intergenic | 35.0% |
| ! | TGCTTTGAATAGTTAAGGTC+AGG | - | chr4_4:26887707-26887726 | None:intergenic | 35.0% |
| AACAAGGCTCTTTGAATGAT+AGG | - | chr4_4:26887826-26887845 | None:intergenic | 35.0% | |
| ATTCAGACTAGGAGTTATGA+TGG | - | chr4_4:26887926-26887945 | None:intergenic | 35.0% | |
| TATTATATCTCTCTCTCCCA+AGG | + | chr4_4:26888394-26888413 | Msa0676310:intron | 35.0% | |
| CCATTATCCTGTTATTCCTT+GGG | - | chr4_4:26888413-26888432 | None:intergenic | 35.0% | |
| ACCATTATCCTGTTATTCCT+TGG | - | chr4_4:26888414-26888433 | None:intergenic | 35.0% | |
| CTTTAGGCATATTTGTGTGA+TGG | + | chr4_4:26888501-26888520 | Msa0676310:intron | 35.0% | |
| CTGACATTCATTAAGTAACC+TGG | - | chr4_4:26888599-26888618 | None:intergenic | 35.0% | |
| AACAGTAAGACACAAATGCA+GGG | + | chr4_4:26888732-26888751 | Msa0676310:intron | 35.0% | |
| ! | AAGAATATGGTTTGGATCTG+AGG | + | chr4_4:26888896-26888915 | Msa0676310:intron | 35.0% |
| AGTAGAGTTATTGCCTGATT+GGG | - | chr4_4:26888954-26888973 | None:intergenic | 35.0% | |
| AAGTAGAGTTATTGCCTGAT+TGG | - | chr4_4:26888955-26888974 | None:intergenic | 35.0% | |
| !!! | TTTTATCGAGTGGTGTTATG+GGG | - | chr4_4:26889597-26889616 | None:intergenic | 35.0% |
| !!! | TTAGGAGGTTTTTTATCGAG+TGG | - | chr4_4:26889607-26889626 | None:intergenic | 35.0% |
| !!! | AGGGAACTTTGTTTTTTAGG+AGG | - | chr4_4:26889622-26889641 | None:intergenic | 35.0% |
| AAAGTTCCCTAAAAGAACAC+AGG | + | chr4_4:26889632-26889651 | Msa0676310:intron | 35.0% | |
| !! | TTGTGCTATTTGTGTTAGCT+TGG | - | chr4_4:26889673-26889692 | None:intergenic | 35.0% |
| GGATAGTTAGGATTATGTCA+AGG | + | chr4_4:26889784-26889803 | Msa0676310:intron | 35.0% | |
| CTAACCAAAGGTCTCAATTT+AGG | - | chr4_4:26889878-26889897 | None:intergenic | 35.0% | |
| GAGAAGAGTTTATAAAGAGG+AGG | + | chr4_4:26889981-26890000 | Msa0676310:intron | 35.0% | |
| CTAACTCATCCTTACAAAAC+CGG | - | chr4_4:26890025-26890044 | None:intergenic | 35.0% | |
| !! | AACTAGTTCTGCAGTTACAA+GGG | - | chr4_4:26890110-26890129 | None:intergenic | 35.0% |
| !! | AAACTAGTTCTGCAGTTACA+AGG | - | chr4_4:26890111-26890130 | None:intergenic | 35.0% |
| !!! | GAACCATCTGTTTTAAGATG+AGG | - | chr4_4:26890427-26890446 | None:intergenic | 35.0% |
| TATTTGCATTCTGCAAAGAC+TGG | - | chr4_4:26890507-26890526 | None:intergenic | 35.0% | |
| AGAGAAAAGGGAATTTGGGT+AGG | - | chr4_4:26886192-26886211 | None:intergenic | 40.0% | |
| GAGTGAGAGAAAAGGGAATT+TGG | - | chr4_4:26886197-26886216 | None:intergenic | 40.0% | |
| GAAGAAGAGAGTGAGAGAAA+AGG | - | chr4_4:26886205-26886224 | None:intergenic | 40.0% | |
| AAATGGAGAGAACCCAGATA+GGG | - | chr4_4:26886245-26886264 | None:intergenic | 40.0% | |
| AAAATGGAGAGAACCCAGAT+AGG | - | chr4_4:26886246-26886265 | None:intergenic | 40.0% | |
| !! | TTCTTCTTCTGAGACAGTCA+CGG | + | chr4_4:26886276-26886295 | Msa0676310:CDS | 40.0% |
| ! | CTCATTGTTTTCAACAGCGA+TGG | - | chr4_4:26886305-26886324 | None:intergenic | 40.0% |
| TGCTGGGTTGCTTGATATAA+GGG | + | chr4_4:26886345-26886364 | Msa0676310:CDS | 40.0% | |
| TTGGTCAGATTGTGAAAGCA+TGG | + | chr4_4:26886368-26886387 | Msa0676310:CDS | 40.0% | |
| GAAACCTGAAGTTGTTCAAG+AGG | - | chr4_4:26886487-26886506 | None:intergenic | 40.0% | |
| TGAAGCCGCCAAAGAATAAA+TGG | - | chr4_4:26887029-26887048 | None:intergenic | 40.0% | |
| CTTTGGATTTCTCAAGCACT+TGG | + | chr4_4:26887260-26887279 | Msa0676310:intron | 40.0% | |
| AAATGCATGTGAGGATAGTC+TGG | + | chr4_4:26887369-26887388 | Msa0676310:intron | 40.0% | |
| TCTCTTAAGTACATGGTCAG+TGG | + | chr4_4:26887407-26887426 | Msa0676310:intron | 40.0% | |
| ATTCAACTCACTGTCCTGTT+GGG | - | chr4_4:26887560-26887579 | None:intergenic | 40.0% | |
| AATTCAACTCACTGTCCTGT+TGG | - | chr4_4:26887561-26887580 | None:intergenic | 40.0% | |
| GGTTTCAACACATGAGAGTT+AGG | - | chr4_4:26887586-26887605 | None:intergenic | 40.0% | |
| CAATTCAGCTCAATAGAGCT+AGG | - | chr4_4:26887607-26887626 | None:intergenic | 40.0% | |
| TTGCCTATCAACATGCAACA+AGG | - | chr4_4:26887842-26887861 | None:intergenic | 40.0% | |
| ! | TTGTTGCATGTTGATAGGCA+AGG | + | chr4_4:26887841-26887860 | Msa0676310:intron | 40.0% |
| ! | GAGTTATGATGGTGTTTGAG+GGG | - | chr4_4:26887915-26887934 | None:intergenic | 40.0% |
| ! | GGAGTTATGATGGTGTTTGA+GGG | - | chr4_4:26887916-26887935 | None:intergenic | 40.0% |
| ! | AGGAGTTATGATGGTGTTTG+AGG | - | chr4_4:26887917-26887936 | None:intergenic | 40.0% |
| ! | AGTATCGAAGGATTCAGACT+AGG | - | chr4_4:26887937-26887956 | None:intergenic | 40.0% |
| GGCTCTCAGAAGAAGAAAAA+AGG | + | chr4_4:26888181-26888200 | Msa0676310:intron | 40.0% | |
| CCCAAGGAATAACAGGATAA+TGG | + | chr4_4:26888410-26888429 | Msa0676310:intron | 40.0% | |
| ! | GCCAATCATATGGTCACTTT+AGG | + | chr4_4:26888485-26888504 | Msa0676310:intron | 40.0% |
| GCCTAAAGTGACCATATGAT+TGG | - | chr4_4:26888489-26888508 | None:intergenic | 40.0% | |
| CTGCATTTGTGTCTTACTGT+TGG | - | chr4_4:26888733-26888752 | None:intergenic | 40.0% | |
| CAACAGTAAGACACAAATGC+AGG | + | chr4_4:26888731-26888750 | Msa0676310:intron | 40.0% | |
| ! | TTCTTTCGAATCTGAAGCCA+AGG | + | chr4_4:26888769-26888788 | Msa0676310:CDS | 40.0% |
| CAAGTCTTCAGGAATGTTGA+TGG | + | chr4_4:26888806-26888825 | Msa0676310:CDS | 40.0% | |
| CAACTCCTGGTGAAAGAATA+TGG | + | chr4_4:26888883-26888902 | Msa0676310:intron | 40.0% | |
| CCAAACCATATTCTTTCACC+AGG | - | chr4_4:26888891-26888910 | None:intergenic | 40.0% | |
| CCTGGTGAAAGAATATGGTT+TGG | + | chr4_4:26888888-26888907 | Msa0676310:intron | 40.0% | |
| GTTTGGATCTGAGGAAGAAA+AGG | + | chr4_4:26888905-26888924 | Msa0676310:intron | 40.0% | |
| AGAAAAGGACAATCAACCTG+AGG | + | chr4_4:26888920-26888939 | Msa0676310:intron | 40.0% | |
| AGTTATTGCCTGATTGGGTT+TGG | - | chr4_4:26888949-26888968 | None:intergenic | 40.0% | |
| AAGGTGTGAGATTCATGAAG+TGG | - | chr4_4:26889358-26889377 | None:intergenic | 40.0% | |
| ! | TGTACTCTTTTTCCTCCTTG+CGG | - | chr4_4:26889548-26889567 | None:intergenic | 40.0% |
| ! | GGTGTTCCTGTGTTCTTTTA+GGG | - | chr4_4:26889641-26889660 | None:intergenic | 40.0% |
| ! | TGGTGTTCCTGTGTTCTTTT+AGG | - | chr4_4:26889642-26889661 | None:intergenic | 40.0% |
| TAGGAATAACTCTCGCAACT+AGG | - | chr4_4:26889703-26889722 | None:intergenic | 40.0% | |
| ATTCTCATCATGTGTGAGTG+TGG | + | chr4_4:26889733-26889752 | Msa0676310:intron | 40.0% | |
| TTCTCATCATGTGTGAGTGT+GGG | + | chr4_4:26889734-26889753 | Msa0676310:intron | 40.0% | |
| CAACACAATGAAGATGTTGG+AGG | - | chr4_4:26889913-26889932 | None:intergenic | 40.0% | |
| CTCCAACATCTTCATTGTGT+TGG | + | chr4_4:26889911-26889930 | Msa0676310:intron | 40.0% | |
| AGCCAACACAATGAAGATGT+TGG | - | chr4_4:26889916-26889935 | None:intergenic | 40.0% | |
| !! | TCTTCATTGTGTTGGCTTTG+AGG | + | chr4_4:26889919-26889938 | Msa0676310:intron | 40.0% |
| !! | CTTCATTGTGTTGGCTTTGA+GGG | + | chr4_4:26889920-26889939 | Msa0676310:intron | 40.0% |
| !! | TTCATTGTGTTGGCTTTGAG+GGG | + | chr4_4:26889921-26889940 | Msa0676310:intron | 40.0% |
| ! | AGTCTTGTCTAATCCGATGT+GGG | - | chr4_4:26889958-26889977 | None:intergenic | 40.0% |
| !! | CGGTTTTGTAAGGATGAGTT+AGG | + | chr4_4:26890023-26890042 | Msa0676310:intron | 40.0% |
| TTAGGCCCCAAATTTCAACA+AGG | + | chr4_4:26890041-26890060 | Msa0676310:intron | 40.0% | |
| AGAGCGACTTTCATAGACAT+TGG | + | chr4_4:26890208-26890227 | Msa0676310:intron | 40.0% | |
| GAACAAGAGACAAAGACTTG+TGG | - | chr4_4:26890243-26890262 | None:intergenic | 40.0% | |
| CAGCCTCATCTTAAAACAGA+TGG | + | chr4_4:26890421-26890440 | Msa0676310:CDS | 40.0% | |
| ! | AGAACCCAGATAGGGTTTTG+GGG | - | chr4_4:26886237-26886256 | None:intergenic | 45.0% |
| ! | GAGAACCCAGATAGGGTTTT+GGG | - | chr4_4:26886238-26886257 | None:intergenic | 45.0% |
| ! | AGAGAACCCAGATAGGGTTT+TGG | - | chr4_4:26886239-26886258 | None:intergenic | 45.0% |
| CTGCTGGGTTGCTTGATATA+AGG | + | chr4_4:26886344-26886363 | Msa0676310:CDS | 45.0% | |
| GGGTTGCTTGATATAAGGGT+TGG | + | chr4_4:26886349-26886368 | Msa0676310:CDS | 45.0% | |
| TGTCCCTCTTGAACAACTTC+AGG | + | chr4_4:26886480-26886499 | Msa0676310:CDS | 45.0% | |
| TGAGGCAGACAACACCAATT+TGG | - | chr4_4:26886604-26886623 | None:intergenic | 45.0% | |
| !! | ATTGGTGTTGTCTGCCTCAA+TGG | + | chr4_4:26886605-26886624 | Msa0676310:intron | 45.0% |
| ATCGGCGACTTTCACTCTAT+CGG | + | chr4_4:26886980-26886999 | Msa0676310:intron | 45.0% | |
| ACTACGTACAGGCTGGATTA+GGG | - | chr4_4:26887078-26887097 | None:intergenic | 45.0% | |
| !!! | TTTTGGGTTGGCTCTCAACA+CGG | - | chr4_4:26887152-26887171 | None:intergenic | 45.0% |
| !! | TTGAATCTAGCTCTCCAACG+AGG | + | chr4_4:26887624-26887643 | Msa0676310:intron | 45.0% |
| AAGAGTCTCTGCAAACTCGT+GGG | - | chr4_4:26887672-26887691 | None:intergenic | 45.0% | |
| !! | GAGCCTTGTTGCATGTTGAT+AGG | + | chr4_4:26887836-26887855 | Msa0676310:intron | 45.0% |
| ! | TGTTGATAGGCAAGGAAGTG+TGG | + | chr4_4:26887849-26887868 | Msa0676310:intron | 45.0% |
| GTACTGTGATTTCTGACCAG+TGG | + | chr4_4:26888160-26888179 | Msa0676310:intron | 45.0% | |
| ! | TTTCTTCTTCTGAGAGCCAC+TGG | - | chr4_4:26888179-26888198 | None:intergenic | 45.0% |
| TCTCTCTCCCAAGGAATAAC+AGG | + | chr4_4:26888403-26888422 | Msa0676310:intron | 45.0% | |
| ! | GTACTCTTTTTCCTCCTTGC+GGG | - | chr4_4:26889547-26889566 | None:intergenic | 45.0% |
| TGGGGTTGTGTCTGTTATTC+TGG | - | chr4_4:26889579-26889598 | None:intergenic | 45.0% | |
| ! | GTGTTAGCTTGGCAGTGTAT+TGG | - | chr4_4:26889662-26889681 | None:intergenic | 45.0% |
| GAATAACTCTCGCAACTAGG+AGG | - | chr4_4:26889700-26889719 | None:intergenic | 45.0% | |
| CTAGGGGCAGAACACAATTA+AGG | - | chr4_4:26889852-26889871 | None:intergenic | 45.0% | |
| GTCTCAATTTAGGCGACTAG+GGG | - | chr4_4:26889868-26889887 | None:intergenic | 45.0% | |
| GGTCTCAATTTAGGCGACTA+GGG | - | chr4_4:26889869-26889888 | None:intergenic | 45.0% | |
| AGGTCTCAATTTAGGCGACT+AGG | - | chr4_4:26889870-26889889 | None:intergenic | 45.0% | |
| GTCGCCTAAATTGAGACCTT+TGG | + | chr4_4:26889871-26889890 | Msa0676310:intron | 45.0% | |
| CTGCAATGAAGGCTAACCAA+AGG | - | chr4_4:26889890-26889909 | None:intergenic | 45.0% | |
| !! | TCATTGTGTTGGCTTTGAGG+GGG | + | chr4_4:26889922-26889941 | Msa0676310:intron | 45.0% |
| ! | GAGTCTTGTCTAATCCGATG+TGG | - | chr4_4:26889959-26889978 | None:intergenic | 45.0% |
| !! | CCTTACAAAACCGGCTTGTA+AGG | - | chr4_4:26890016-26890035 | None:intergenic | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | + | chr4_4:26890013-26890032 | Msa0676310:intron | 45.0% |
| CATGTTATGCGTACATCTGC+AGG | + | chr4_4:26890469-26890488 | Msa0676310:CDS | 45.0% | |
| !! | TGTTCGTGAGAGTGTTGTGG+TGG | - | chr4_4:26886152-26886171 | None:intergenic | 50.0% |
| !! | CGTTGTTCGTGAGAGTGTTG+TGG | - | chr4_4:26886155-26886174 | None:intergenic | 50.0% |
| AAGCAATCCAAACAGGCCCT+AGG | + | chr4_4:26886889-26886908 | Msa0676310:intron | 50.0% | |
| CTAATGACCTAGGGCCTGTT+TGG | - | chr4_4:26886899-26886918 | None:intergenic | 50.0% | |
| CAAACAGGCCCTAGGTCATT+AGG | + | chr4_4:26886897-26886916 | Msa0676310:intron | 50.0% | |
| CTCTCCCACCTAATGACCTA+GGG | - | chr4_4:26886908-26886927 | None:intergenic | 50.0% | |
| !! | GATGACGTCGGCTCTTAAAG+GGG | - | chr4_4:26886963-26886982 | None:intergenic | 50.0% |
| !! | CGATGACGTCGGCTCTTAAA+GGG | - | chr4_4:26886964-26886983 | None:intergenic | 50.0% |
| ! | CCTTTAAGAGCCGACGTCAT+CGG | + | chr4_4:26886962-26886981 | Msa0676310:intron | 50.0% |
| GACTTTCACTCTATCGGCAG+TGG | + | chr4_4:26886986-26887005 | Msa0676310:intron | 50.0% | |
| GACTACGTACAGGCTGGATT+AGG | - | chr4_4:26887079-26887098 | None:intergenic | 50.0% | |
| CTACGGAAACGACTACGTAC+AGG | - | chr4_4:26887089-26887108 | None:intergenic | 50.0% | |
| !! | TTTGGGTTGGCTCTCAACAC+GGG | - | chr4_4:26887151-26887170 | None:intergenic | 50.0% |
| AGAGTCTCTGCAAACTCGTG+GGG | - | chr4_4:26887671-26887690 | None:intergenic | 50.0% | |
| CAAGAGTCTCTGCAAACTCG+TGG | - | chr4_4:26887673-26887692 | None:intergenic | 50.0% | |
| ! | CAGGATAATGGTGTCTGTCC+TGG | + | chr4_4:26888422-26888441 | Msa0676310:intron | 50.0% |
| CTGAAGCCAAGGAATATGCG+TGG | + | chr4_4:26888780-26888799 | Msa0676310:CDS | 50.0% | |
| TTGACGCCACGCATATTCCT+TGG | - | chr4_4:26888789-26888808 | None:intergenic | 50.0% | |
| TTCACCAGGAGTTGCTTCCT+CGG | - | chr4_4:26888877-26888896 | None:intergenic | 50.0% | |
| CAAGATGCACAAAACCCGCA+AGG | + | chr4_4:26889530-26889549 | Msa0676310:intron | 50.0% | |
| GGGGCAGAACACAATTAAGG+CGG | - | chr4_4:26889849-26889868 | None:intergenic | 50.0% | |
| GATGTTGGAGGCTGCAATGA+AGG | - | chr4_4:26889901-26889920 | None:intergenic | 50.0% | |
| ! | GGGTGGATTTAGTCCCACAT+CGG | + | chr4_4:26889942-26889961 | Msa0676310:intron | 50.0% |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | - | chr4_4:26890011-26890030 | None:intergenic | 50.0% |
| GGTTCTTGTACTGCGATGCT+AGG | + | chr4_4:26890442-26890461 | Msa0676310:CDS | 50.0% | |
| !!! | TAGGGTTTTGGGGCGTGAAG+AGG | - | chr4_4:26886227-26886246 | None:intergenic | 55.0% |
| TCACGCCCCAAAACCCTATC+TGG | + | chr4_4:26886229-26886248 | Msa0676310:CDS | 55.0% | |
| CACGCCCCAAAACCCTATCT+GGG | + | chr4_4:26886230-26886249 | Msa0676310:CDS | 55.0% | |
| ACAGGCCCTAGGTCATTAGG+TGG | + | chr4_4:26886900-26886919 | Msa0676310:intron | 55.0% | |
| CAGGCCCTAGGTCATTAGGT+GGG | + | chr4_4:26886901-26886920 | Msa0676310:intron | 55.0% | |
| GCTCTCCCACCTAATGACCT+AGG | - | chr4_4:26886909-26886928 | None:intergenic | 55.0% | |
| !! | CCGATGACGTCGGCTCTTAA+AGG | - | chr4_4:26886965-26886984 | None:intergenic | 55.0% |
| GTGAAAGTCGCCGATGACGT+CGG | - | chr4_4:26886975-26886994 | None:intergenic | 55.0% | |
| GGAAACGACTACGTACAGGC+TGG | - | chr4_4:26887085-26887104 | None:intergenic | 55.0% | |
| CGCAAGTCTCTCCCGCTTAA+TGG | - | chr4_4:26887182-26887201 | None:intergenic | 55.0% | |
| ! | TAGCTCTCCAACGAGGTGTC+AGG | + | chr4_4:26887631-26887650 | Msa0676310:intron | 55.0% |
| ! | AGCTCTCCAACGAGGTGTCA+GGG | + | chr4_4:26887632-26887651 | Msa0676310:intron | 55.0% |
| ! | CAACGAGGTGTCAGGGTTTG+CGG | + | chr4_4:26887639-26887658 | Msa0676310:intron | 55.0% |
| ! | AACGAGGTGTCAGGGTTTGC+GGG | + | chr4_4:26887640-26887659 | Msa0676310:intron | 55.0% |
| ATGCGTGGCGTCAAGTCTTC+AGG | + | chr4_4:26888795-26888814 | Msa0676310:CDS | 55.0% | |
| TGAACTTCTGTTCCCTCCCG+AGG | + | chr4_4:26888857-26888876 | Msa0676310:intron | 55.0% | |
| TCACCAGGAGTTGCTTCCTC+GGG | - | chr4_4:26888876-26888895 | None:intergenic | 55.0% | |
| TGATTGGGTTTGGCAGCCTC+AGG | - | chr4_4:26888939-26888958 | None:intergenic | 55.0% | |
| TGAGGCTGCCAAACCCAATC+AGG | + | chr4_4:26888938-26888957 | Msa0676310:intron | 55.0% | |
| GATGCACAAAACCCGCAAGG+AGG | + | chr4_4:26889533-26889552 | Msa0676310:intron | 55.0% | |
| !! | TTGTGTTGGCTTTGAGGGGG+TGG | + | chr4_4:26889925-26889944 | Msa0676310:intron | 55.0% |
| GCACTCCTCACCTTACAAGC+CGG | + | chr4_4:26890003-26890022 | Msa0676310:intron | 55.0% | |
| !! | GACGTCGGCTCTTAAAGGGG+TGG | - | chr4_4:26886960-26886979 | None:intergenic | 60.0% |
| CGCAAACCCTGACACCTCGT+TGG | - | chr4_4:26887641-26887660 | None:intergenic | 60.0% | |
| CAGGAGTTGCTTCCTCGGGA+GGG | - | chr4_4:26888872-26888891 | None:intergenic | 60.0% | |
| GGGTGCGGATGGGGATAGTT+AGG | + | chr4_4:26889772-26889791 | Msa0676310:intron | 60.0% | |
| CCAGGAGTTGCTTCCTCGGG+AGG | - | chr4_4:26888873-26888892 | None:intergenic | 65.0% | |
| CCTCCCGAGGAAGCAACTCC+TGG | + | chr4_4:26888870-26888889 | Msa0676310:intron | 65.0% | |
| GCGTGCGTGTGGGTGCGGAT+GGG | + | chr4_4:26889762-26889781 | Msa0676310:intron | 70.0% | |
| CGTGCGTGTGGGTGCGGATG+GGG | + | chr4_4:26889763-26889782 | Msa0676310:intron | 70.0% | |
| TGTGGGTGCGCGCGTGCGTG+TGG | + | chr4_4:26889751-26889770 | Msa0676310:intron | 75.0% | |
| GTGGGTGCGCGCGTGCGTGT+GGG | + | chr4_4:26889752-26889771 | Msa0676310:intron | 75.0% | |
| TGCGCGCGTGCGTGTGGGTG+CGG | + | chr4_4:26889757-26889776 | Msa0676310:intron | 75.0% | |
| CGCGTGCGTGTGGGTGCGGA+TGG | + | chr4_4:26889761-26889780 | Msa0676310:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 26886088 | 26890534 | 26886088 | ID=Msa0676310;Name=Msa0676310 |
| chr4_4 | mRNA | 26886088 | 26890534 | 26886088 | ID=Msa0676310-mRNA-1;Parent=Msa0676310;Name=Msa0676310-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|1|0|0.25|4|0|216 |
| chr4_4 | exon | 26886088 | 26886331 | 26886088 | ID=Msa0676310-mRNA-1:exon:7128;Parent=Msa0676310-mRNA-1 |
| chr4_4 | exon | 26886341 | 26886501 | 26886341 | ID=Msa0676310-mRNA-1:exon:7129;Parent=Msa0676310-mRNA-1 |
| chr4_4 | exon | 26888753 | 26888854 | 26888753 | ID=Msa0676310-mRNA-1:exon:7130;Parent=Msa0676310-mRNA-1 |
| chr4_4 | exon | 26890391 | 26890534 | 26890391 | ID=Msa0676310-mRNA-1:exon:7131;Parent=Msa0676310-mRNA-1 |
| chr4_4 | CDS | 26886088 | 26886331 | 26886088 | ID=Msa0676310-mRNA-1:cds;Parent=Msa0676310-mRNA-1 |
| chr4_4 | CDS | 26886341 | 26886501 | 26886341 | ID=Msa0676310-mRNA-1:cds;Parent=Msa0676310-mRNA-1 |
| chr4_4 | CDS | 26888753 | 26888854 | 26888753 | ID=Msa0676310-mRNA-1:cds;Parent=Msa0676310-mRNA-1 |
| chr4_4 | CDS | 26890391 | 26890534 | 26890391 | ID=Msa0676310-mRNA-1:cds;Parent=Msa0676310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
