Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0092480 | XP_013455479.1 | 76.744 | 258 | 17 | 3 | 1 | 216 | 1 | 257 | 7.04e-115 | 338 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0092480 | sp|P31230|AIMP1_MOUSE | 44.138 | 145 | 54 | 1 | 74 | 191 | 140 | 284 | 7.85e-31 | 118 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0092480 | A0A072UUH4 | 76.744 | 258 | 17 | 3 | 1 | 216 | 1 | 257 | 3.36e-115 | 338 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0026780 | Msa0092480 | -0.811240 | 7.728595e-51 | -8.615850e-47 |
Msa0035050 | Msa0092480 | 0.821308 | 4.325738e-53 | -8.615850e-47 |
Msa0037080 | Msa0092480 | -0.815472 | 9.085064e-52 | -8.615850e-47 |
Msa0037650 | Msa0092480 | 0.820274 | 7.478529e-53 | -8.615850e-47 |
Msa0037780 | Msa0092480 | 0.836069 | 1.161265e-56 | -8.615850e-47 |
Msa0039140 | Msa0092480 | 0.806634 | 7.477526e-50 | -8.615850e-47 |
Msa0042950 | Msa0092480 | 0.823553 | 1.302204e-53 | -8.615850e-47 |
Msa0046020 | Msa0092480 | 0.804822 | 1.796245e-49 | -8.615850e-47 |
Msa0067370 | Msa0092480 | 0.800234 | 1.586022e-48 | -8.615850e-47 |
Msa0069150 | Msa0092480 | 0.826404 | 2.763832e-54 | -8.615850e-47 |
Msa0075990 | Msa0092480 | 0.821860 | 3.225442e-53 | -8.615850e-47 |
Msa0081440 | Msa0092480 | 0.816410 | 5.609729e-52 | -8.615850e-47 |
Msa0084300 | Msa0092480 | -0.802376 | 5.777819e-49 | -8.615850e-47 |
Msa0092480 | Msa0094170 | 0.814877 | 1.231357e-51 | -8.615850e-47 |
Msa0092480 | Msa0097470 | 0.805720 | 1.164884e-49 | -8.615850e-47 |
Msa0092480 | Msa0099530 | 0.810357 | 1.199841e-50 | -8.615850e-47 |
Msa0092480 | Msa0112880 | 0.805769 | 1.137539e-49 | -8.615850e-47 |
Msa0092480 | Msa0136870 | 0.812084 | 5.065042e-51 | -8.615850e-47 |
Msa0092480 | Msa0142340 | 0.827380 | 1.615272e-54 | -8.615850e-47 |
Msa0092480 | Msa0148140 | 0.810386 | 1.182693e-50 | -8.615850e-47 |
Msa0092480 | Msa0159240 | 0.804444 | 2.153827e-49 | -8.615850e-47 |
Msa0092480 | Msa0168770 | 0.812510 | 4.089315e-51 | -8.615850e-47 |
Msa0092480 | Msa0173700 | 0.804668 | 1.933972e-49 | -8.615850e-47 |
Msa0092480 | Msa0173950 | 0.803714 | 3.056026e-49 | -8.615850e-47 |
Msa0092480 | Msa0178840 | 0.825366 | 4.874514e-54 | -8.615850e-47 |
Msa0092480 | Msa0186400 | 0.815432 | 9.273581e-52 | -8.615850e-47 |
Msa0092480 | Msa0187590 | 0.834097 | 3.650049e-56 | -8.615850e-47 |
Msa0092480 | Msa0195810 | 0.852519 | 4.377773e-61 | -8.615850e-47 |
Msa0092480 | Msa0225080 | 0.803735 | 3.024911e-49 | -8.615850e-47 |
Msa0092480 | Msa0225790 | 0.819012 | 1.451864e-52 | -8.615850e-47 |
Msa0092480 | Msa0226260 | -0.813113 | 3.016596e-51 | -8.615850e-47 |
Msa0092480 | Msa0237650 | 0.803107 | 4.082663e-49 | -8.615850e-47 |
Msa0092480 | Msa0238950 | -0.820147 | 7.995833e-53 | -8.615850e-47 |
Msa0092480 | Msa0256140 | -0.806809 | 6.867203e-50 | -8.615850e-47 |
Msa0092480 | Msa0259450 | 0.815507 | 8.922549e-52 | -8.615850e-47 |
Msa0092480 | Msa0260580 | 0.821668 | 3.571705e-53 | -8.615850e-47 |
Msa0092480 | Msa0260640 | 0.824652 | 7.187035e-54 | -8.615850e-47 |
Msa0092480 | Msa0270730 | 0.808165 | 3.541985e-50 | -8.615850e-47 |
Msa0092480 | Msa0275250 | 0.850240 | 1.930363e-60 | -8.615850e-47 |
Msa0092480 | Msa0304730 | -0.803391 | 3.565018e-49 | -8.615850e-47 |
Msa0092480 | Msa0305630 | 0.804167 | 2.459920e-49 | -8.615850e-47 |
Msa0092480 | Msa0308750 | -0.809134 | 2.198126e-50 | -8.615850e-47 |
Msa0092480 | Msa0315720 | 0.840880 | 6.659722e-58 | -8.615850e-47 |
Msa0092480 | Msa0316740 | -0.810291 | 1.240284e-50 | -8.615850e-47 |
Msa0092480 | Msa0326170 | 0.827140 | 1.844465e-54 | -8.615850e-47 |
Msa0092480 | Msa0326630 | 0.846428 | 2.185487e-59 | -8.615850e-47 |
Msa0092480 | Msa0327990 | 0.844604 | 6.820841e-59 | -8.615850e-47 |
Msa0092480 | Msa0329360 | 0.806370 | 8.502613e-50 | -8.615850e-47 |
Msa0092480 | Msa0334450 | 0.809233 | 2.094217e-50 | -8.615850e-47 |
Msa0092480 | Msa0367540 | 0.852798 | 3.643015e-61 | -8.615850e-47 |
Msa0092480 | Msa0372570 | 0.825234 | 5.238595e-54 | -8.615850e-47 |
Msa0092480 | Msa0373120 | 0.857332 | 1.753778e-62 | -8.615850e-47 |
Msa0092480 | Msa0382020 | 0.801296 | 9.628730e-49 | -8.615850e-47 |
Msa0092480 | Msa0383870 | 0.826807 | 2.214994e-54 | -8.615850e-47 |
Msa0092480 | Msa0385930 | 0.820010 | 8.597761e-53 | -8.615850e-47 |
Msa0092480 | Msa0387030 | -0.801632 | 8.217048e-49 | -8.615850e-47 |
Msa0092480 | Msa0387630 | 0.811351 | 7.312223e-51 | -8.615850e-47 |
Msa0092480 | Msa0392120 | 0.804826 | 1.792984e-49 | -8.615850e-47 |
Msa0092480 | Msa0397420 | 0.807853 | 4.125279e-50 | -8.615850e-47 |
Msa0092480 | Msa0415160 | 0.852919 | 3.364379e-61 | -8.615850e-47 |
Msa0092480 | Msa0419150 | 0.823206 | 1.568990e-53 | -8.615850e-47 |
Msa0092480 | Msa0420300 | 0.810918 | 9.077727e-51 | -8.615850e-47 |
Msa0092480 | Msa0431270 | 0.807763 | 4.312506e-50 | -8.615850e-47 |
Msa0092480 | Msa0434830 | 0.804882 | 1.744755e-49 | -8.615850e-47 |
Msa0092480 | Msa0437820 | 0.810301 | 1.234104e-50 | -8.615850e-47 |
Msa0092480 | Msa0460170 | 0.858329 | 8.879458e-63 | -8.615850e-47 |
Msa0092480 | Msa0464980 | 0.823628 | 1.250246e-53 | -8.615850e-47 |
Msa0092480 | Msa0484560 | 0.810527 | 1.102721e-50 | -8.615850e-47 |
Msa0092480 | Msa0492920 | 0.803137 | 4.024304e-49 | -8.615850e-47 |
Msa0092480 | Msa0500610 | 0.851467 | 8.707663e-61 | -8.615850e-47 |
Msa0092480 | Msa0500700 | 0.838922 | 2.156497e-57 | -8.615850e-47 |
Msa0092480 | Msa0512950 | 0.842708 | 2.192907e-58 | -8.615850e-47 |
Msa0092480 | Msa0523420 | 0.826515 | 2.600747e-54 | -8.615850e-47 |
Msa0092480 | Msa0531270 | 0.835900 | 1.281587e-56 | -8.615850e-47 |
Msa0092480 | Msa0536970 | 0.807154 | 5.804663e-50 | -8.615850e-47 |
Msa0092480 | Msa0548420 | -0.806536 | 7.844099e-50 | -8.615850e-47 |
Msa0092480 | Msa0549950 | -0.806351 | 8.580109e-50 | -8.615850e-47 |
Msa0092480 | Msa0557440 | 0.815343 | 9.703159e-52 | -8.615850e-47 |
Msa0092480 | Msa0559450 | 0.812163 | 4.867201e-51 | -8.615850e-47 |
Msa0092480 | Msa0565370 | 0.802396 | 5.723355e-49 | -8.615850e-47 |
Msa0092480 | Msa0569580 | 0.817745 | 2.811475e-52 | -8.615850e-47 |
Msa0092480 | Msa0572550 | 0.807832 | 4.168748e-50 | -8.615850e-47 |
Msa0092480 | Msa0572730 | 0.817992 | 2.472815e-52 | -8.615850e-47 |
Msa0092480 | Msa0576020 | 0.815821 | 7.596634e-52 | -8.615850e-47 |
Msa0092480 | Msa0576080 | 0.836919 | 7.055159e-57 | -8.615850e-47 |
Msa0092480 | Msa0576090 | 0.835308 | 1.809436e-56 | -8.615850e-47 |
Msa0092480 | Msa0576120 | 0.813622 | 2.332105e-51 | -8.615850e-47 |
Msa0092480 | Msa0576480 | 0.801144 | 1.034061e-48 | -8.615850e-47 |
Msa0092480 | Msa0580890 | 0.802355 | 5.834435e-49 | -8.615850e-47 |
Msa0092480 | Msa0582270 | 0.808382 | 3.183341e-50 | -8.615850e-47 |
Msa0092480 | Msa0588110 | 0.864965 | 8.317216e-65 | -8.615850e-47 |
Msa0092480 | Msa0590620 | 0.818471 | 1.926982e-52 | -8.615850e-47 |
Msa0092480 | Msa0616890 | 0.814037 | 1.888754e-51 | -8.615850e-47 |
Msa0092480 | Msa0626920 | -0.812405 | 4.309604e-51 | -8.615850e-47 |
Msa0092480 | Msa0628440 | 0.824171 | 9.326550e-54 | -8.615850e-47 |
Msa0092480 | Msa0638010 | 0.813964 | 1.960138e-51 | -8.615850e-47 |
Msa0092480 | Msa0639530 | 0.804171 | 2.455470e-49 | -8.615850e-47 |
Msa0092480 | Msa0646030 | 0.824276 | 8.813752e-54 | -8.615850e-47 |
Msa0092480 | Msa0646410 | 0.847890 | 8.682376e-60 | -8.615850e-47 |
Msa0092480 | Msa0646420 | -0.806802 | 6.890714e-50 | -8.615850e-47 |
Msa0092480 | Msa0651000 | 0.805380 | 1.372845e-49 | -8.615850e-47 |
Msa0092480 | Msa0651870 | -0.812225 | 4.718621e-51 | -8.615850e-47 |
Msa0092480 | Msa0651890 | -0.810090 | 1.369925e-50 | -8.615850e-47 |
Msa0092480 | Msa0661540 | 0.807336 | 5.313141e-50 | -8.615850e-47 |
Msa0092480 | Msa0662220 | -0.803343 | 3.648328e-49 | -8.615850e-47 |
Msa0092480 | Msa0665530 | 0.801661 | 8.105391e-49 | -8.615850e-47 |
Msa0092480 | Msa0671300 | 0.801792 | 7.618936e-49 | -8.615850e-47 |
Msa0092480 | Msa0676090 | 0.910624 | 1.521243e-82 | -8.615850e-47 |
Msa0092480 | Msa0676310 | 0.986689 | 1.237427e-167 | -8.615850e-47 |
Msa0092480 | Msa0676570 | 0.815700 | 8.083025e-52 | -8.615850e-47 |
Msa0092480 | Msa0693050 | 0.827005 | 1.986613e-54 | -8.615850e-47 |
Msa0092480 | Msa0695250 | 0.803356 | 3.625143e-49 | -8.615850e-47 |
Msa0092480 | Msa0701800 | 0.816442 | 5.519433e-52 | -8.615850e-47 |
Msa0092480 | Msa0707170 | 0.812356 | 4.417958e-51 | -8.615850e-47 |
Msa0092480 | Msa0707860 | 0.816734 | 4.747108e-52 | -8.615850e-47 |
Msa0092480 | Msa0742370 | 0.814700 | 1.348150e-51 | -8.615850e-47 |
Msa0092480 | Msa0758880 | 0.803890 | 2.808918e-49 | -8.615850e-47 |
Msa0092480 | Msa0769910 | 0.802196 | 6.292194e-49 | -8.615850e-47 |
Msa0092480 | Msa0779450 | 0.813854 | 2.073565e-51 | -8.615850e-47 |
Msa0092480 | Msa0793130 | 0.807126 | 5.887225e-50 | -8.615850e-47 |
Msa0092480 | Msa0801920 | 0.802821 | 4.677688e-49 | -8.615850e-47 |
Msa0092480 | Msa0807870 | 0.814678 | 1.362950e-51 | -8.615850e-47 |
Msa0092480 | Msa0832520 | -0.806475 | 8.077835e-50 | -8.615850e-47 |
Msa0092480 | Msa0838120 | 0.802236 | 6.173170e-49 | -8.615850e-47 |
Msa0092480 | Msa0862480 | 0.807871 | 4.089818e-50 | -8.615850e-47 |
Msa0092480 | Msa0881880 | 0.805466 | 1.317249e-49 | -8.615850e-47 |
Msa0092480 | Msa0946110 | -0.809698 | 1.663742e-50 | -8.615850e-47 |
Msa0092480 | Msa0947550 | 0.806830 | 6.800189e-50 | -8.615850e-47 |
Msa0092480 | Msa0968060 | 0.814660 | 1.375522e-51 | -8.615850e-47 |
Msa0092480 | Msa0979020 | 0.830769 | 2.436475e-55 | -8.615850e-47 |
Msa0092480 | Msa1025040 | 0.814589 | 1.426521e-51 | -8.615850e-47 |
Msa0092480 | Msa1029030 | 0.837344 | 5.495261e-57 | -8.615850e-47 |
Msa0092480 | Msa1039190 | 0.840614 | 7.818126e-58 | -8.615850e-47 |
Msa0092480 | Msa1039440 | 0.802318 | 5.938208e-49 | -8.615850e-47 |
Msa0092480 | Msa1041570 | 0.801126 | 1.043178e-48 | -8.615850e-47 |
Msa0092480 | Msa1063590 | 0.821355 | 4.219967e-53 | -8.615850e-47 |
Msa0092480 | Msa1074210 | -0.825439 | 4.684245e-54 | -8.615850e-47 |
Msa0092480 | Msa1080610 | 0.832390 | 9.714137e-56 | -8.615850e-47 |
Msa0092480 | Msa1080680 | 0.832856 | 7.443904e-56 | -8.615850e-47 |
Msa0092480 | Msa1081520 | 0.817578 | 3.066896e-52 | -8.615850e-47 |
Msa0092480 | Msa1083620 | 0.805822 | 1.108800e-49 | -8.615850e-47 |
Msa0092480 | Msa1085610 | 0.840408 | 8.854159e-58 | -8.615850e-47 |
Msa0092480 | Msa1087520 | 0.842375 | 2.686912e-58 | -8.615850e-47 |
Msa0092480 | Msa1112190 | -0.801207 | 1.003838e-48 | -8.615850e-47 |
Msa0092480 | Msa1117770 | 0.804796 | 1.819242e-49 | -8.615850e-47 |
Msa0092480 | Msa1121720 | 0.806720 | 7.172535e-50 | -8.615850e-47 |
Msa0092480 | Msa1126320 | 0.806238 | 9.066034e-50 | -8.615850e-47 |
Msa0092480 | Msa1128610 | 0.835398 | 1.717722e-56 | -8.615850e-47 |
Msa0092480 | Msa1129300 | 0.845005 | 5.318093e-59 | -8.615850e-47 |
Msa0092480 | Msa1131680 | -0.819369 | 1.204430e-52 | -8.615850e-47 |
Msa0092480 | Msa1133690 | -0.810613 | 1.056462e-50 | -8.615850e-47 |
Msa0092480 | Msa1143810 | 0.858946 | 5.809562e-63 | -8.615850e-47 |
Msa0092480 | Msa1159160 | -0.809821 | 1.565743e-50 | -8.615850e-47 |
Msa0092480 | Msa1166470 | 0.803913 | 2.778278e-49 | -8.615850e-47 |
Msa0092480 | Msa1167150 | 0.835208 | 1.918585e-56 | -8.615850e-47 |
Msa0092480 | Msa1190100 | 0.853933 | 1.721526e-61 | -8.615850e-47 |
Msa0092480 | Msa1190510 | 0.817587 | 3.052982e-52 | -8.615850e-47 |
Msa0092480 | Msa1202470 | -0.802057 | 6.718894e-49 | -8.615850e-47 |
Msa0092480 | Msa1202710 | 0.803298 | 3.726696e-49 | -8.615850e-47 |
Msa0092480 | Msa1204900 | 0.803906 | 2.787000e-49 | -8.615850e-47 |
Msa0092480 | Msa1207920 | 0.801977 | 6.980180e-49 | -8.615850e-47 |
Msa0092480 | Msa1229670 | 0.817676 | 2.914481e-52 | -8.615850e-47 |
Msa0092480 | Msa1251410 | -0.804051 | 2.600322e-49 | -8.615850e-47 |
Msa0092480 | Msa1254360 | 0.815333 | 9.753342e-52 | -8.615850e-47 |
Msa0092480 | Msa1255480 | 0.817437 | 3.299847e-52 | -8.615850e-47 |
Msa0092480 | Msa1258030 | 0.883156 | 5.692304e-71 | -8.615850e-47 |
Msa0092480 | Msa1291070 | 0.803439 | 3.484196e-49 | -8.615850e-47 |
Msa0092480 | Msa1298170 | 0.819478 | 1.137104e-52 | -8.615850e-47 |
Msa0092480 | Msa1303620 | 0.819838 | 9.409316e-53 | -8.615850e-47 |
Msa0092480 | Msa1325560 | 0.828380 | 9.284015e-55 | -8.615850e-47 |
Msa0092480 | Msa1326780 | 0.841353 | 5.004495e-58 | -8.615850e-47 |
Msa0092480 | Msa1330540 | 0.803569 | 3.274978e-49 | -8.615850e-47 |
Msa0092480 | Msa1341390 | 0.800540 | 1.373984e-48 | -8.615850e-47 |
Msa0092480 | Msa1341710 | 0.809300 | 2.025669e-50 | -8.615850e-47 |
Msa0092480 | Msa1342110 | 0.803919 | 2.770254e-49 | -8.615850e-47 |
Msa0092480 | Msa1345540 | 0.833403 | 5.441838e-56 | -8.615850e-47 |
Msa0092480 | Msa1350550 | 0.807914 | 4.004947e-50 | -8.615850e-47 |
Msa0092480 | Msa1350590 | 0.806660 | 7.386517e-50 | -8.615850e-47 |
Msa0092480 | Msa1356100 | 0.807419 | 5.101830e-50 | -8.615850e-47 |
Msa0092480 | Msa1357990 | -0.805284 | 1.437827e-49 | -8.615850e-47 |
Msa0092480 | Msa1360070 | 0.809487 | 1.846903e-50 | -8.615850e-47 |
Msa0092480 | Msa1361670 | 0.837345 | 5.491182e-57 | -8.615850e-47 |
Msa0092480 | Msa1364350 | 0.832345 | 9.968576e-56 | -8.615850e-47 |
Msa0092480 | Msa1373420 | 0.807457 | 5.008545e-50 | -8.615850e-47 |
Msa0092480 | Msa1375970 | 0.858790 | 6.469204e-63 | -8.615850e-47 |
Msa0092480 | Msa1375980 | 0.806209 | 9.194291e-50 | -8.615850e-47 |
Msa0092480 | Msa1377980 | 0.822412 | 2.402575e-53 | -8.615850e-47 |
Msa0092480 | Msa1395380 | 0.800278 | 1.553598e-48 | -8.615850e-47 |
Msa0092480 | Msa1398450 | 0.830069 | 3.613932e-55 | -8.615850e-47 |
Msa0092480 | Msa1401640 | 0.844859 | 5.823469e-59 | -8.615850e-47 |
Msa0092480 | Msa1408230 | 0.805863 | 1.087045e-49 | -8.615850e-47 |
Msa0092480 | Msa1408280 | 0.824728 | 6.898311e-54 | -8.615850e-47 |
Msa0092480 | Msa1411930 | 0.847109 | 1.423167e-59 | -8.615850e-47 |
Msa0092480 | Msa1415510 | 0.804803 | 1.812642e-49 | -8.615850e-47 |
Msa0092480 | Msa1431510 | 0.830195 | 3.367000e-55 | -8.615850e-47 |
Msa0092480 | Msa1440990 | 0.819114 | 1.376319e-52 | -8.615850e-47 |
Msa0092480 | Msa1444130 | 0.815782 | 7.750449e-52 | -8.615850e-47 |
Msa0092480 | Msa1444690 | 0.813914 | 2.010915e-51 | -8.615850e-47 |
Msa0092480 | Msa1454300 | 0.804438 | 2.160346e-49 | -8.615850e-47 |
Msa0092480 | Msa1456180 | 0.834859 | 2.349237e-56 | -8.615850e-47 |
Msa0092480 | Msa1457390 | 0.834932 | 2.251797e-56 | -8.615850e-47 |
Msa0092480 | Msa1459130 | 0.813642 | 2.308413e-51 | -8.615850e-47 |
Msa0092480 | Msa1462210 | 0.806015 | 1.010046e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0092480 | MtrunA17_Chr4g0019821 | 76.744 | 258 | 17 | 3 | 1 | 216 | 1 | 257 | 6.47e-119 | 338 |
Msa0092480 | MtrunA17_Chr4g0068561 | 40.994 | 161 | 64 | 2 | 79 | 210 | 34 | 192 | 4.91e-33 | 117 |
Msa0092480 | MtrunA17_Chr4g0039621 | 40.506 | 158 | 65 | 1 | 87 | 215 | 648 | 805 | 4.67e-30 | 117 |
Msa0092480 | MtrunA17_Chr3g0128701 | 35.220 | 159 | 72 | 3 | 76 | 203 | 218 | 376 | 7.04e-19 | 84.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0092480 | AT3G59980.1 | 54.455 | 202 | 47 | 3 | 59 | 216 | 73 | 273 | 1.99e-64 | 201 |
Msa0092480 | AT4G13780.1 | 37.349 | 166 | 75 | 1 | 79 | 215 | 631 | 796 | 3.77e-25 | 103 |
Msa0092480 | AT2G40660.1 | 43.023 | 86 | 49 | 0 | 86 | 171 | 231 | 316 | 1.29e-16 | 77.8 |
Find 40 sgRNAs with CRISPR-Local
Find 301 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAGTGAGAGAAAAGGGAATT+TGG | 0.204168 | 1_2:-74964622 | None:intergenic |
TCACGCCCCAAAACCCTATC+TGG | 0.209394 | 1_2:+74964657 | Msa0092480:CDS |
CTGCTGGGTTGCTTGATATA+AGG | 0.220534 | 1_2:+74964772 | Msa0092480:CDS |
TTTGGGTAGGAATGAGTAAT+TGG | 0.260789 | 1_2:-74964604 | None:intergenic |
GAAGAAGAAAGAGTGCAAAA+TGG | 0.289404 | 1_2:-74964687 | None:intergenic |
TGTCCCTCTTGAACAACTTC+AGG | 0.318121 | 1_2:+74964908 | Msa0092480:CDS |
AGACCACTGCAAATAATTCT+AGG | 0.337017 | 1_2:-74964876 | None:intergenic |
AGAGAACCCAGATAGGGTTT+TGG | 0.349454 | 1_2:-74964664 | None:intergenic |
AGTGAGAGAAAAGGGAATTT+GGG | 0.353893 | 1_2:-74964621 | None:intergenic |
TGCTGGGTTGCTTGATATAA+GGG | 0.359660 | 1_2:+74964773 | Msa0092480:CDS |
ATGCGTGGCGTCAAGTCTTC+AGG | 0.362081 | 1_2:+74967223 | Msa0092480:CDS |
AAGAAGAGAGTGAGAGAAAA+GGG | 0.367952 | 1_2:-74964629 | None:intergenic |
GAAGAAGAGAGTGAGAGAAA+AGG | 0.375038 | 1_2:-74964630 | None:intergenic |
TATGTTGAAGAGGTTGATAT+TGG | 0.447688 | 1_2:+74964843 | Msa0092480:CDS |
CAAGTCTTCAGGAATGTTGA+TGG | 0.466166 | 1_2:+74967234 | Msa0092480:CDS |
CTGCAAATAATTCTAGGTTC+AGG | 0.473329 | 1_2:-74964870 | None:intergenic |
AGTAGTATTAAAGATACTGC+TGG | 0.483323 | 1_2:+74964756 | Msa0092480:intron |
TTGACGCCACGCATATTCCT+TGG | 0.486119 | 1_2:-74967214 | None:intergenic |
CATGTTATGCGTACATCTGC+AGG | 0.488090 | 1_2:+74968896 | Msa0092480:CDS |
AAAATGGAGAGAACCCAGAT+AGG | 0.491884 | 1_2:-74964671 | None:intergenic |
TGAATCACTTTATGTTGAAG+AGG | 0.510641 | 1_2:+74964833 | Msa0092480:CDS |
TTCTTTCGAATCTGAAGCCA+AGG | 0.511951 | 1_2:+74967197 | Msa0092480:CDS |
TATTTGCATTCTGCAAAGAC+TGG | 0.514661 | 1_2:-74968931 | None:intergenic |
AAATGGAGAGAACCCAGATA+GGG | 0.556896 | 1_2:-74964670 | None:intergenic |
CAGCCTCATCTTAAAACAGA+TGG | 0.557780 | 1_2:+74968848 | Msa0092480:CDS |
TTGGTCAGATTGTGAAAGCA+TGG | 0.562162 | 1_2:+74964796 | Msa0092480:CDS |
TTCTTCTTCTGAGACAGTCA+CGG | 0.562195 | 1_2:+74964704 | Msa0092480:CDS |
AAAATGGCAAATGTATTGAA+AGG | 0.563636 | 1_2:+74964513 | None:intergenic |
CACGCCCCAAAACCCTATCT+GGG | 0.569575 | 1_2:+74964658 | Msa0092480:CDS |
AGAGAAAAGGGAATTTGGGT+AGG | 0.575873 | 1_2:-74964617 | None:intergenic |
GGTTCTTGTACTGCGATGCT+AGG | 0.576090 | 1_2:+74968869 | Msa0092480:CDS |
GAAACCTGAAGTTGTTCAAG+AGG | 0.586172 | 1_2:-74964912 | None:intergenic |
GTAGTATTAAAGATACTGCT+GGG | 0.595902 | 1_2:+74964757 | Msa0092480:intron |
GAACCTAGAATTATTTGCAG+TGG | 0.609307 | 1_2:+74964873 | Msa0092480:CDS |
CGTTGTTCGTGAGAGTGTTG+TGG | 0.624714 | 1_2:-74964580 | None:intergenic |
ATGGCAAATGTATTGAAAGG+TGG | 0.625147 | 1_2:+74964516 | Msa0092480:CDS |
GGGTTGCTTGATATAAGGGT+TGG | 0.626322 | 1_2:+74964777 | Msa0092480:CDS |
AAACCTGAAGTTGTTCAAGA+GGG | 0.658505 | 1_2:-74964911 | None:intergenic |
CTGAAGCCAAGGAATATGCG+TGG | 0.688927 | 1_2:+74967208 | Msa0092480:CDS |
TGTTCGTGAGAGTGTTGTGG+TGG | 0.704660 | 1_2:-74964577 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | CTTTTTTTATGAATTTTTTT+TGG | + | chr1_2:74964938-74964957 | Msa0092480:intron | 10.0% |
!!! | ATTGAAATTATGTTTTTTAT+TGG | + | chr1_2:74964967-74964986 | Msa0092480:intron | 10.0% |
!!! | AAAATATCTTTTACTAATAT+CGG | + | chr1_2:74966393-74966412 | Msa0092480:intron | 10.0% |
!!! | ATTTTTATTAAATAACATGT+TGG | - | chr1_2:74966721-74966740 | None:intergenic | 10.0% |
!!! | AATACTAATAAATTTGTTTA+AGG | + | chr1_2:74966891-74966910 | Msa0092480:intron | 10.0% |
!!! | AAAAAGAATTTTTAATTTGA+CGG | - | chr1_2:74967454-74967473 | None:intergenic | 10.0% |
!! | GTATATAAAAATATTCAATG+CGG | - | chr1_2:74965642-74965661 | None:intergenic | 15.0% |
!!! | ATATTTTTATATACTTGATG+TGG | + | chr1_2:74965648-74965667 | Msa0092480:intron | 15.0% |
!!! | TATTTTTATATACTTGATGT+GGG | + | chr1_2:74965649-74965668 | Msa0092480:intron | 15.0% |
!! | ATATATGAGGTATATTTAAA+GGG | - | chr1_2:74965752-74965771 | None:intergenic | 15.0% |
!! | TAAACATAAATTTAGAAATG+AGG | - | chr1_2:74966756-74966775 | None:intergenic | 15.0% |
!!! | TCTTTTTATTTAAATTATCC+AGG | - | chr1_2:74966871-74966890 | None:intergenic | 15.0% |
!!! | GATTTTCTTTCAAAAAAAAA+AGG | - | chr1_2:74967805-74967824 | None:intergenic | 15.0% |
!! | AAAGAATATTAAGTTACAAA+TGG | - | chr1_2:74968783-74968802 | None:intergenic | 15.0% |
!! | TTCAATATGGAATTTAATTG+TGG | + | chr1_2:74965005-74965024 | Msa0092480:intron | 20.0% |
!! | AAATTCTCCAAAATAGTTTA+TGG | - | chr1_2:74965194-74965213 | None:intergenic | 20.0% |
!! | CATATATGAGGTATATTTAA+AGG | - | chr1_2:74965753-74965772 | None:intergenic | 20.0% |
!! | ATTGCAAAACTAAATTTCAA+AGG | + | chr1_2:74966154-74966173 | Msa0092480:intron | 20.0% |
!!! | TTTTATAAAAACAGTATCGA+AGG | - | chr1_2:74966377-74966396 | None:intergenic | 20.0% |
!!! | TTGTTTTAATTGAAGATTTG+TGG | + | chr1_2:74966432-74966451 | Msa0092480:intron | 20.0% |
!! | ACAGTTCAAATATTAAAGTT+TGG | - | chr1_2:74966651-74966670 | None:intergenic | 20.0% |
!! | TAAGCATACAACAAATATTA+AGG | - | chr1_2:74966786-74966805 | None:intergenic | 20.0% |
!! | ATGAAAAATTAACCATGAAT+AGG | - | chr1_2:74966980-74966999 | None:intergenic | 20.0% |
!!! | TAATTTTTCATATGCAAAAC+TGG | + | chr1_2:74966989-74967008 | Msa0092480:intron | 20.0% |
!! | ATTAAAATGTAAGTTCTATG+AGG | + | chr1_2:74967056-74967075 | Msa0092480:intron | 20.0% |
!! | ATTAATTGCAAAACATAAAG+TGG | - | chr1_2:74967085-74967104 | None:intergenic | 20.0% |
!!! | TGCAATTAATATATTTGTTG+AGG | + | chr1_2:74967095-74967114 | Msa0092480:intron | 20.0% |
!! | AATGAATTCACAAAGTAAAT+GGG | - | chr1_2:74967580-74967599 | None:intergenic | 20.0% |
!! | AAATGAATTCACAAAGTAAA+TGG | - | chr1_2:74967581-74967600 | None:intergenic | 20.0% |
!!! | TTCATTTTAACTTGCTATTA+AGG | - | chr1_2:74967833-74967852 | None:intergenic | 20.0% |
!!! | TTGCTGATTCAAAAAAAAAA+AGG | - | chr1_2:74967915-74967934 | None:intergenic | 20.0% |
!! | TTGAATCAGCAAATATTATT+AGG | + | chr1_2:74967923-74967942 | Msa0092480:intron | 20.0% |
!! | TATTAGAGTAATAGACTAAT+AGG | + | chr1_2:74968560-74968579 | Msa0092480:intron | 20.0% |
!! | ATTAGAGTAATAGACTAATA+GGG | + | chr1_2:74968561-74968580 | Msa0092480:intron | 20.0% |
!! | ACTAATGAATTATCATGTTA+TGG | - | chr1_2:74968740-74968759 | None:intergenic | 20.0% |
!! | AGATACAAAAGAAAAAGATA+TGG | + | chr1_2:74968816-74968835 | Msa0092480:intron | 20.0% |
!! | GATACAAAAGAAAAAGATAT+GGG | + | chr1_2:74968817-74968836 | Msa0092480:intron | 20.0% |
!! | TTTTTATTGGCGCATTTTAT+CGG | + | chr1_2:74964980-74964999 | Msa0092480:intron | 25.0% |
!! | CATTTTATCGGATTTCAATA+TGG | + | chr1_2:74964992-74965011 | Msa0092480:intron | 25.0% |
! | AATTTAATTGTGGACCAAAT+TGG | + | chr1_2:74965015-74965034 | Msa0092480:intron | 25.0% |
!!! | GTTGTTTCCATAAACTATTT+TGG | + | chr1_2:74965184-74965203 | Msa0092480:intron | 25.0% |
! | TATGACTCAAATAAGTCATA+AGG | - | chr1_2:74965359-74965378 | None:intergenic | 25.0% |
!!! | GTTTTAATCTCTTAAGTACA+TGG | + | chr1_2:74965828-74965847 | Msa0092480:intron | 25.0% |
! | AACTAAATTTCAAAGGAATC+TGG | + | chr1_2:74966161-74966180 | Msa0092480:intron | 25.0% |
!! | GAATCTGGAATTAAAACATA+TGG | + | chr1_2:74966176-74966195 | Msa0092480:intron | 25.0% |
!! | TGCTGTATAGTATTTTTCTA+TGG | + | chr1_2:74966555-74966574 | Msa0092480:intron | 25.0% |
!! | AATATTAAAGTTTGGAGTCT+TGG | - | chr1_2:74966643-74966662 | None:intergenic | 25.0% |
! | GTATGCTTATGTATTTAGAA+AGG | + | chr1_2:74966797-74966816 | Msa0092480:intron | 25.0% |
! | ACACAAAAACACAAATATGA+TGG | - | chr1_2:74967129-74967148 | None:intergenic | 25.0% |
! | TTTGACGGTTGAATTATTAA+GGG | - | chr1_2:74967439-74967458 | None:intergenic | 25.0% |
! | ATTTGACGGTTGAATTATTA+AGG | - | chr1_2:74967440-74967459 | None:intergenic | 25.0% |
! | ATGAATTCACAAAGTAAATG+GGG | - | chr1_2:74967579-74967598 | None:intergenic | 25.0% |
!!! | GTTAATTTTACTTGCTAAGA+AGG | + | chr1_2:74967626-74967645 | Msa0092480:intron | 25.0% |
!!! | TTTAGGGAACTTTGTTTTTT+AGG | - | chr1_2:74968052-74968071 | None:intergenic | 25.0% |
! | GATGAGAATAAATTCACTAT+AGG | - | chr1_2:74968149-74968168 | None:intergenic | 25.0% |
!! | ATTGAGTCTAGTTTCAATTT+GGG | - | chr1_2:74968242-74968261 | None:intergenic | 25.0% |
!! | TATTGAGTCTAGTTTCAATT+TGG | - | chr1_2:74968243-74968262 | None:intergenic | 25.0% |
! | TGAAACTAGACTCAATAATT+TGG | + | chr1_2:74968246-74968265 | Msa0092480:intron | 25.0% |
!! | TTTTCTCCTTGTTGAAATTT+GGG | - | chr1_2:74968477-74968496 | None:intergenic | 25.0% |
!! | ATTTTCTCCTTGTTGAAATT+TGG | - | chr1_2:74968478-74968497 | None:intergenic | 25.0% |
! | AAATTTCAACAAGGAGAAAA+TGG | + | chr1_2:74968477-74968496 | Msa0092480:intron | 25.0% |
! | AATTTCAACAAGGAGAAAAT+GGG | + | chr1_2:74968478-74968497 | Msa0092480:intron | 25.0% |
! | TACAAGGGAATACAAAAAAA+GGG | - | chr1_2:74968522-74968541 | None:intergenic | 25.0% |
! | TTACAAGGGAATACAAAAAA+AGG | - | chr1_2:74968523-74968542 | None:intergenic | 25.0% |
! | AAAGAAAAAGATATGGGAAT+TGG | + | chr1_2:74968823-74968842 | Msa0092480:CDS | 25.0% |
AGTAGTATTAAAGATACTGC+TGG | + | chr1_2:74964756-74964775 | Msa0092480:intron | 30.0% | |
GTAGTATTAAAGATACTGCT+GGG | + | chr1_2:74964757-74964776 | Msa0092480:intron | 30.0% | |
TGAATCACTTTATGTTGAAG+AGG | + | chr1_2:74964833-74964852 | Msa0092480:CDS | 30.0% | |
!! | TATGTTGAAGAGGTTGATAT+TGG | + | chr1_2:74964843-74964862 | Msa0092480:CDS | 30.0% |
! | GGTAAGTTGTTAGAACTTTT+AGG | + | chr1_2:74965054-74965073 | Msa0092480:intron | 30.0% |
! | ATATGTTTTGTGACACTGTT+TGG | - | chr1_2:74965276-74965295 | None:intergenic | 30.0% |
TGAAATAAAGCAATCCAAAC+AGG | + | chr1_2:74965310-74965329 | Msa0092480:intron | 30.0% | |
AAGAATAAATGGCTATCACT+AGG | - | chr1_2:74965446-74965465 | None:intergenic | 30.0% | |
AGTGATAGCCATTTATTCTT+TGG | + | chr1_2:74965446-74965465 | Msa0092480:intron | 30.0% | |
TTCACTCATCTATCAGTATT+TGG | + | chr1_2:74965473-74965492 | Msa0092480:intron | 30.0% | |
! | GCTTAATGGAATAGTCTTTT+GGG | - | chr1_2:74965596-74965615 | None:intergenic | 30.0% |
CAAAAGACTATTCCATTAAG+CGG | + | chr1_2:74965595-74965614 | Msa0092480:intron | 30.0% | |
AAAAGACTATTCCATTAAGC+GGG | + | chr1_2:74965596-74965615 | Msa0092480:intron | 30.0% | |
AAATATTCAATGCGGTACTT+AGG | - | chr1_2:74965634-74965653 | None:intergenic | 30.0% | |
GACTCATAACATAAGTACTT+TGG | + | chr1_2:74965671-74965690 | Msa0092480:intron | 30.0% | |
TGATTCAATTTCTGACTGAT+CGG | + | chr1_2:74965715-74965734 | Msa0092480:intron | 30.0% | |
AATCTTCAAAAATGCATGTG+AGG | + | chr1_2:74965788-74965807 | Msa0092480:intron | 30.0% | |
! | TTTGATTTCTGACATATGCA+AGG | + | chr1_2:74965858-74965877 | Msa0092480:intron | 30.0% |
! | TGCAATGCTTTGAATAGTTA+AGG | - | chr1_2:74966140-74966159 | None:intergenic | 30.0% |
! | TCAGCTAATATTTGGAATGA+TGG | - | chr1_2:74966218-74966237 | None:intergenic | 30.0% |
CTTTCACTTCAGCTAATATT+TGG | - | chr1_2:74966226-74966245 | None:intergenic | 30.0% | |
! | TTTGTTTAAGGCCAATCATA+TGG | + | chr1_2:74966903-74966922 | Msa0092480:intron | 30.0% |
TAAGATACTCTTCCTATTCA+TGG | + | chr1_2:74966965-74966984 | Msa0092480:intron | 30.0% | |
AACTGGAAAATAACTTATCC+AGG | + | chr1_2:74967006-74967025 | Msa0092480:intron | 30.0% | |
TTGACGGTTGAATTATTAAG+GGG | - | chr1_2:74967438-74967457 | None:intergenic | 30.0% | |
GATACTTCATCAAGAAACAT+TGG | + | chr1_2:74967519-74967538 | Msa0092480:intron | 30.0% | |
!!! | GAACAATTGTGTGCATTTTT+TGG | + | chr1_2:74967669-74967688 | Msa0092480:intron | 30.0% |
! | GAAGATGAAATATTAGCTTG+AGG | - | chr1_2:74967747-74967766 | None:intergenic | 30.0% |
TCAGCAAATATTATTAGGCT+AGG | + | chr1_2:74967928-74967947 | Msa0092480:intron | 30.0% | |
!!! | TTTTTATCGAGTGGTGTTAT+GGG | - | chr1_2:74968025-74968044 | None:intergenic | 30.0% |
!!! | TTTTTTATCGAGTGGTGTTA+TGG | - | chr1_2:74968026-74968045 | None:intergenic | 30.0% |
GATAGTTAGGATTATGTCAA+GGG | + | chr1_2:74968212-74968231 | Msa0092480:intron | 30.0% | |
CTTGAGAAGAGTTTATAAAG+AGG | + | chr1_2:74968405-74968424 | Msa0092480:intron | 30.0% | |
TTTCTCCTTGTTGAAATTTG+GGG | - | chr1_2:74968476-74968495 | None:intergenic | 30.0% | |
!!! | AGTCGCTCTCTTATTTTTAT+AGG | - | chr1_2:74968624-74968643 | None:intergenic | 30.0% |
! | TTTTCCTTCAATCTTTTGTG+TGG | + | chr1_2:74968697-74968716 | Msa0092480:intron | 30.0% |
TAAACCACACAAAAGATTGA+AGG | - | chr1_2:74968704-74968723 | None:intergenic | 30.0% | |
ATCATGTTATGGCAATAGAT+AGG | - | chr1_2:74968729-74968748 | None:intergenic | 30.0% | |
ACAAATGGAAAAAGACATGT+TGG | - | chr1_2:74968768-74968787 | None:intergenic | 30.0% | |
ATGGCAAATGTATTGAAAGG+TGG | + | chr1_2:74964516-74964535 | Msa0092480:CDS | 35.0% | |
TTTGGGTAGGAATGAGTAAT+TGG | - | chr1_2:74964607-74964626 | None:intergenic | 35.0% | |
AGTGAGAGAAAAGGGAATTT+GGG | - | chr1_2:74964624-74964643 | None:intergenic | 35.0% | |
AAGAAGAGAGTGAGAGAAAA+GGG | - | chr1_2:74964632-74964651 | None:intergenic | 35.0% | |
! | GAAGAAGAAAGAGTGCAAAA+TGG | - | chr1_2:74964690-74964709 | None:intergenic | 35.0% |
! | TCATTGTTTTCAACAGCGAT+GGG | - | chr1_2:74964732-74964751 | None:intergenic | 35.0% |
CTGCAAATAATTCTAGGTTC+AGG | - | chr1_2:74964873-74964892 | None:intergenic | 35.0% | |
GAACCTAGAATTATTTGCAG+TGG | + | chr1_2:74964873-74964892 | Msa0092480:CDS | 35.0% | |
AGACCACTGCAAATAATTCT+AGG | - | chr1_2:74964879-74964898 | None:intergenic | 35.0% | |
AAACCTGAAGTTGTTCAAGA+GGG | - | chr1_2:74964914-74964933 | None:intergenic | 35.0% | |
GTTCTAACAACTTACCATTG+AGG | - | chr1_2:74965050-74965069 | None:intergenic | 35.0% | |
! | TTGTTAGAACTTTTAGGCAC+TGG | + | chr1_2:74965060-74965079 | Msa0092480:intron | 35.0% |
GATAGCCATTTATTCTTTGG+CGG | + | chr1_2:74965449-74965468 | Msa0092480:intron | 35.0% | |
ACTCATCTATCAGTATTTGG+TGG | + | chr1_2:74965476-74965495 | Msa0092480:intron | 35.0% | |
TTCTGTCGAGAATTAGACTA+CGG | - | chr1_2:74965534-74965553 | None:intergenic | 35.0% | |
CGGGCTTAAGTAATAACAAT+TGG | - | chr1_2:74965560-74965579 | None:intergenic | 35.0% | |
!! | AATGGAATAGTCTTTTGGGT+TGG | - | chr1_2:74965592-74965611 | None:intergenic | 35.0% |
! | CGCTTAATGGAATAGTCTTT+TGG | - | chr1_2:74965597-74965616 | None:intergenic | 35.0% |
ACCTCATATATGCTCAGAAA+AGG | + | chr1_2:74965761-74965780 | Msa0092480:intron | 35.0% | |
! | TCCTTTTCTGAGCATATATG+AGG | - | chr1_2:74965765-74965784 | None:intergenic | 35.0% |
! | GTTCATGACTATGTTTCTGT+TGG | - | chr1_2:74965923-74965942 | None:intergenic | 35.0% |
AAGTTTGCAATAAACCCAAC+AGG | + | chr1_2:74965971-74965990 | Msa0092480:intron | 35.0% | |
! | GCTTTGAATAGTTAAGGTCA+GGG | - | chr1_2:74966134-74966153 | None:intergenic | 35.0% |
! | TGCTTTGAATAGTTAAGGTC+AGG | - | chr1_2:74966135-74966154 | None:intergenic | 35.0% |
AACAAGGCTCTTTGAATGAT+AGG | - | chr1_2:74966254-74966273 | None:intergenic | 35.0% | |
ATTCAGACTAGGAGTTATGA+TGG | - | chr1_2:74966354-74966373 | None:intergenic | 35.0% | |
TATTATATCTCTCTCTCCCA+AGG | + | chr1_2:74966822-74966841 | Msa0092480:intron | 35.0% | |
CCATTATCCTGTTATTCCTT+GGG | - | chr1_2:74966841-74966860 | None:intergenic | 35.0% | |
ACCATTATCCTGTTATTCCT+TGG | - | chr1_2:74966842-74966861 | None:intergenic | 35.0% | |
CTTTAGGCATATTTGTGTGA+TGG | + | chr1_2:74966929-74966948 | Msa0092480:intron | 35.0% | |
CTGACATTCATTAAGTAACC+TGG | - | chr1_2:74967027-74967046 | None:intergenic | 35.0% | |
AACAGTAAGACACAAATGCA+GGG | + | chr1_2:74967160-74967179 | Msa0092480:intron | 35.0% | |
! | AAGAATATGGTTTGGATCTG+AGG | + | chr1_2:74967324-74967343 | Msa0092480:intron | 35.0% |
AGTAGAGTTATTGCCTGATT+GGG | - | chr1_2:74967382-74967401 | None:intergenic | 35.0% | |
AAGTAGAGTTATTGCCTGAT+TGG | - | chr1_2:74967383-74967402 | None:intergenic | 35.0% | |
!!! | TTTTATCGAGTGGTGTTATG+GGG | - | chr1_2:74968024-74968043 | None:intergenic | 35.0% |
!!! | TTAGGAGGTTTTTTATCGAG+TGG | - | chr1_2:74968034-74968053 | None:intergenic | 35.0% |
!!! | AGGGAACTTTGTTTTTTAGG+AGG | - | chr1_2:74968049-74968068 | None:intergenic | 35.0% |
AAAGTTCCCTAAAAGAACAC+AGG | + | chr1_2:74968059-74968078 | Msa0092480:intron | 35.0% | |
!! | TTGTGCTATTTGTGTTAGCT+TGG | - | chr1_2:74968100-74968119 | None:intergenic | 35.0% |
GGATAGTTAGGATTATGTCA+AGG | + | chr1_2:74968211-74968230 | Msa0092480:intron | 35.0% | |
CTAACCAAAGGTCTCAATTT+AGG | - | chr1_2:74968305-74968324 | None:intergenic | 35.0% | |
GAGAAGAGTTTATAAAGAGG+AGG | + | chr1_2:74968408-74968427 | Msa0092480:intron | 35.0% | |
CTAACTCATCCTTACAAAAC+CGG | - | chr1_2:74968452-74968471 | None:intergenic | 35.0% | |
!! | AACTAGTTCTGCAGTTACAA+GGG | - | chr1_2:74968537-74968556 | None:intergenic | 35.0% |
!! | AAACTAGTTCTGCAGTTACA+AGG | - | chr1_2:74968538-74968557 | None:intergenic | 35.0% |
!!! | GAACCATCTGTTTTAAGATG+AGG | - | chr1_2:74968854-74968873 | None:intergenic | 35.0% |
TATTTGCATTCTGCAAAGAC+TGG | - | chr1_2:74968934-74968953 | None:intergenic | 35.0% | |
AGAGAAAAGGGAATTTGGGT+AGG | - | chr1_2:74964620-74964639 | None:intergenic | 40.0% | |
GAGTGAGAGAAAAGGGAATT+TGG | - | chr1_2:74964625-74964644 | None:intergenic | 40.0% | |
GAAGAAGAGAGTGAGAGAAA+AGG | - | chr1_2:74964633-74964652 | None:intergenic | 40.0% | |
AAATGGAGAGAACCCAGATA+GGG | - | chr1_2:74964673-74964692 | None:intergenic | 40.0% | |
AAAATGGAGAGAACCCAGAT+AGG | - | chr1_2:74964674-74964693 | None:intergenic | 40.0% | |
!! | TTCTTCTTCTGAGACAGTCA+CGG | + | chr1_2:74964704-74964723 | Msa0092480:CDS | 40.0% |
! | CTCATTGTTTTCAACAGCGA+TGG | - | chr1_2:74964733-74964752 | None:intergenic | 40.0% |
TGCTGGGTTGCTTGATATAA+GGG | + | chr1_2:74964773-74964792 | Msa0092480:CDS | 40.0% | |
TTGGTCAGATTGTGAAAGCA+TGG | + | chr1_2:74964796-74964815 | Msa0092480:CDS | 40.0% | |
GAAACCTGAAGTTGTTCAAG+AGG | - | chr1_2:74964915-74964934 | None:intergenic | 40.0% | |
TGAAGCCGCCAAAGAATAAA+TGG | - | chr1_2:74965457-74965476 | None:intergenic | 40.0% | |
CTTTGGATTTCTCAAGCACT+TGG | + | chr1_2:74965688-74965707 | Msa0092480:intron | 40.0% | |
AAATGCATGTGAGGATAGTC+TGG | + | chr1_2:74965797-74965816 | Msa0092480:intron | 40.0% | |
TCTCTTAAGTACATGGTCAG+TGG | + | chr1_2:74965835-74965854 | Msa0092480:intron | 40.0% | |
ATTCAACTCACTGTCCTGTT+GGG | - | chr1_2:74965988-74966007 | None:intergenic | 40.0% | |
AATTCAACTCACTGTCCTGT+TGG | - | chr1_2:74965989-74966008 | None:intergenic | 40.0% | |
GGTTTCAACACATGAGAGTT+AGG | - | chr1_2:74966014-74966033 | None:intergenic | 40.0% | |
CAATTCAGCTCAATAGAGCT+AGG | - | chr1_2:74966035-74966054 | None:intergenic | 40.0% | |
TTGCCTATCAACATGCAACA+AGG | - | chr1_2:74966270-74966289 | None:intergenic | 40.0% | |
! | TTGTTGCATGTTGATAGGCA+AGG | + | chr1_2:74966269-74966288 | Msa0092480:intron | 40.0% |
! | GAGTTATGATGGTGTTTGAG+GGG | - | chr1_2:74966343-74966362 | None:intergenic | 40.0% |
! | GGAGTTATGATGGTGTTTGA+GGG | - | chr1_2:74966344-74966363 | None:intergenic | 40.0% |
! | AGGAGTTATGATGGTGTTTG+AGG | - | chr1_2:74966345-74966364 | None:intergenic | 40.0% |
! | AGTATCGAAGGATTCAGACT+AGG | - | chr1_2:74966365-74966384 | None:intergenic | 40.0% |
GGCTCTCAGAAGAAGAAAAA+AGG | + | chr1_2:74966609-74966628 | Msa0092480:intron | 40.0% | |
CCCAAGGAATAACAGGATAA+TGG | + | chr1_2:74966838-74966857 | Msa0092480:intron | 40.0% | |
! | GCCAATCATATGGTCACTTT+AGG | + | chr1_2:74966913-74966932 | Msa0092480:intron | 40.0% |
GCCTAAAGTGACCATATGAT+TGG | - | chr1_2:74966917-74966936 | None:intergenic | 40.0% | |
CTGCATTTGTGTCTTACTGT+TGG | - | chr1_2:74967161-74967180 | None:intergenic | 40.0% | |
CAACAGTAAGACACAAATGC+AGG | + | chr1_2:74967159-74967178 | Msa0092480:intron | 40.0% | |
! | TTCTTTCGAATCTGAAGCCA+AGG | + | chr1_2:74967197-74967216 | Msa0092480:CDS | 40.0% |
CAAGTCTTCAGGAATGTTGA+TGG | + | chr1_2:74967234-74967253 | Msa0092480:CDS | 40.0% | |
CAACTCCTGGTGAAAGAATA+TGG | + | chr1_2:74967311-74967330 | Msa0092480:intron | 40.0% | |
CCAAACCATATTCTTTCACC+AGG | - | chr1_2:74967319-74967338 | None:intergenic | 40.0% | |
CCTGGTGAAAGAATATGGTT+TGG | + | chr1_2:74967316-74967335 | Msa0092480:intron | 40.0% | |
GTTTGGATCTGAGGAAGAAA+AGG | + | chr1_2:74967333-74967352 | Msa0092480:intron | 40.0% | |
AGAAAAGGACAATCAACCTG+AGG | + | chr1_2:74967348-74967367 | Msa0092480:intron | 40.0% | |
AGTTATTGCCTGATTGGGTT+TGG | - | chr1_2:74967377-74967396 | None:intergenic | 40.0% | |
AAGGTGTGAGATTCATGAAG+TGG | - | chr1_2:74967786-74967805 | None:intergenic | 40.0% | |
! | TGTACTCTTTTTCCTCCTTG+CGG | - | chr1_2:74967975-74967994 | None:intergenic | 40.0% |
! | GGTGTTCCTGTGTTCTTTTA+GGG | - | chr1_2:74968068-74968087 | None:intergenic | 40.0% |
! | TGGTGTTCCTGTGTTCTTTT+AGG | - | chr1_2:74968069-74968088 | None:intergenic | 40.0% |
TAGGAATAACTCTCGCAACT+AGG | - | chr1_2:74968130-74968149 | None:intergenic | 40.0% | |
ATTCTCATCATGTGTGAGTG+TGG | + | chr1_2:74968160-74968179 | Msa0092480:intron | 40.0% | |
TTCTCATCATGTGTGAGTGT+GGG | + | chr1_2:74968161-74968180 | Msa0092480:intron | 40.0% | |
CAACACAATGAAGATGTTGG+AGG | - | chr1_2:74968340-74968359 | None:intergenic | 40.0% | |
CTCCAACATCTTCATTGTGT+TGG | + | chr1_2:74968338-74968357 | Msa0092480:intron | 40.0% | |
AGCCAACACAATGAAGATGT+TGG | - | chr1_2:74968343-74968362 | None:intergenic | 40.0% | |
!! | TCTTCATTGTGTTGGCTTTG+AGG | + | chr1_2:74968346-74968365 | Msa0092480:intron | 40.0% |
!! | CTTCATTGTGTTGGCTTTGA+GGG | + | chr1_2:74968347-74968366 | Msa0092480:intron | 40.0% |
!! | TTCATTGTGTTGGCTTTGAG+GGG | + | chr1_2:74968348-74968367 | Msa0092480:intron | 40.0% |
! | AGTCTTGTCTAATCCGATGT+GGG | - | chr1_2:74968385-74968404 | None:intergenic | 40.0% |
!! | CGGTTTTGTAAGGATGAGTT+AGG | + | chr1_2:74968450-74968469 | Msa0092480:intron | 40.0% |
TTAGGCCCCAAATTTCAACA+AGG | + | chr1_2:74968468-74968487 | Msa0092480:intron | 40.0% | |
AGAGCGACTTTCATAGACAT+TGG | + | chr1_2:74968635-74968654 | Msa0092480:intron | 40.0% | |
GAACAAGAGACAAAGACTTG+TGG | - | chr1_2:74968670-74968689 | None:intergenic | 40.0% | |
CAGCCTCATCTTAAAACAGA+TGG | + | chr1_2:74968848-74968867 | Msa0092480:CDS | 40.0% | |
! | AGAACCCAGATAGGGTTTTG+GGG | - | chr1_2:74964665-74964684 | None:intergenic | 45.0% |
! | GAGAACCCAGATAGGGTTTT+GGG | - | chr1_2:74964666-74964685 | None:intergenic | 45.0% |
! | AGAGAACCCAGATAGGGTTT+TGG | - | chr1_2:74964667-74964686 | None:intergenic | 45.0% |
CTGCTGGGTTGCTTGATATA+AGG | + | chr1_2:74964772-74964791 | Msa0092480:CDS | 45.0% | |
GGGTTGCTTGATATAAGGGT+TGG | + | chr1_2:74964777-74964796 | Msa0092480:CDS | 45.0% | |
TGTCCCTCTTGAACAACTTC+AGG | + | chr1_2:74964908-74964927 | Msa0092480:CDS | 45.0% | |
TGAGGCAGACAACACCAATT+TGG | - | chr1_2:74965032-74965051 | None:intergenic | 45.0% | |
!! | ATTGGTGTTGTCTGCCTCAA+TGG | + | chr1_2:74965033-74965052 | Msa0092480:intron | 45.0% |
ATCGGCGACTTTCACTCTAT+CGG | + | chr1_2:74965408-74965427 | Msa0092480:intron | 45.0% | |
ACTACGTACAGGCTGGATTA+GGG | - | chr1_2:74965506-74965525 | None:intergenic | 45.0% | |
!!! | TTTTGGGTTGGCTCTCAACA+CGG | - | chr1_2:74965580-74965599 | None:intergenic | 45.0% |
!! | TTGAATCTAGCTCTCCAACG+AGG | + | chr1_2:74966052-74966071 | Msa0092480:intron | 45.0% |
AAGAGTCTCTGCAAACTCGT+GGG | - | chr1_2:74966100-74966119 | None:intergenic | 45.0% | |
!! | GAGCCTTGTTGCATGTTGAT+AGG | + | chr1_2:74966264-74966283 | Msa0092480:intron | 45.0% |
! | TGTTGATAGGCAAGGAAGTG+TGG | + | chr1_2:74966277-74966296 | Msa0092480:intron | 45.0% |
GTACTGTGATTTCTGACCAG+TGG | + | chr1_2:74966588-74966607 | Msa0092480:intron | 45.0% | |
! | TTTCTTCTTCTGAGAGCCAC+TGG | - | chr1_2:74966607-74966626 | None:intergenic | 45.0% |
TCTCTCTCCCAAGGAATAAC+AGG | + | chr1_2:74966831-74966850 | Msa0092480:intron | 45.0% | |
! | GTACTCTTTTTCCTCCTTGC+GGG | - | chr1_2:74967974-74967993 | None:intergenic | 45.0% |
TGGGGTTGTGTCTGTTATTC+TGG | - | chr1_2:74968006-74968025 | None:intergenic | 45.0% | |
! | GTGTTAGCTTGGCAGTGTAT+TGG | - | chr1_2:74968089-74968108 | None:intergenic | 45.0% |
GAATAACTCTCGCAACTAGG+AGG | - | chr1_2:74968127-74968146 | None:intergenic | 45.0% | |
CTAGGGGCAGAACACAATTA+AGG | - | chr1_2:74968279-74968298 | None:intergenic | 45.0% | |
GTCTCAATTTAGGCGACTAG+GGG | - | chr1_2:74968295-74968314 | None:intergenic | 45.0% | |
GGTCTCAATTTAGGCGACTA+GGG | - | chr1_2:74968296-74968315 | None:intergenic | 45.0% | |
AGGTCTCAATTTAGGCGACT+AGG | - | chr1_2:74968297-74968316 | None:intergenic | 45.0% | |
GTCGCCTAAATTGAGACCTT+TGG | + | chr1_2:74968298-74968317 | Msa0092480:intron | 45.0% | |
CTGCAATGAAGGCTAACCAA+AGG | - | chr1_2:74968317-74968336 | None:intergenic | 45.0% | |
!! | TCATTGTGTTGGCTTTGAGG+GGG | + | chr1_2:74968349-74968368 | Msa0092480:intron | 45.0% |
! | GAGTCTTGTCTAATCCGATG+TGG | - | chr1_2:74968386-74968405 | None:intergenic | 45.0% |
!! | CCTTACAAAACCGGCTTGTA+AGG | - | chr1_2:74968443-74968462 | None:intergenic | 45.0% |
!! | CCTTACAAGCCGGTTTTGTA+AGG | + | chr1_2:74968440-74968459 | Msa0092480:intron | 45.0% |
CATGTTATGCGTACATCTGC+AGG | + | chr1_2:74968896-74968915 | Msa0092480:CDS | 45.0% | |
!! | TGTTCGTGAGAGTGTTGTGG+TGG | - | chr1_2:74964580-74964599 | None:intergenic | 50.0% |
!! | CGTTGTTCGTGAGAGTGTTG+TGG | - | chr1_2:74964583-74964602 | None:intergenic | 50.0% |
AAGCAATCCAAACAGGCCCT+AGG | + | chr1_2:74965317-74965336 | Msa0092480:intron | 50.0% | |
CTAATGACCTAGGGCCTGTT+TGG | - | chr1_2:74965327-74965346 | None:intergenic | 50.0% | |
CAAACAGGCCCTAGGTCATT+AGG | + | chr1_2:74965325-74965344 | Msa0092480:intron | 50.0% | |
CTCTCCCACCTAATGACCTA+GGG | - | chr1_2:74965336-74965355 | None:intergenic | 50.0% | |
!! | GATGACGTCGGCTCTTAAAG+GGG | - | chr1_2:74965391-74965410 | None:intergenic | 50.0% |
!! | CGATGACGTCGGCTCTTAAA+GGG | - | chr1_2:74965392-74965411 | None:intergenic | 50.0% |
! | CCTTTAAGAGCCGACGTCAT+CGG | + | chr1_2:74965390-74965409 | Msa0092480:intron | 50.0% |
GACTTTCACTCTATCGGCAG+TGG | + | chr1_2:74965414-74965433 | Msa0092480:intron | 50.0% | |
GACTACGTACAGGCTGGATT+AGG | - | chr1_2:74965507-74965526 | None:intergenic | 50.0% | |
CTACGGAAACGACTACGTAC+AGG | - | chr1_2:74965517-74965536 | None:intergenic | 50.0% | |
!! | TTTGGGTTGGCTCTCAACAC+GGG | - | chr1_2:74965579-74965598 | None:intergenic | 50.0% |
AGAGTCTCTGCAAACTCGTG+GGG | - | chr1_2:74966099-74966118 | None:intergenic | 50.0% | |
CAAGAGTCTCTGCAAACTCG+TGG | - | chr1_2:74966101-74966120 | None:intergenic | 50.0% | |
! | CAGGATAATGGTGTCTGTCC+TGG | + | chr1_2:74966850-74966869 | Msa0092480:intron | 50.0% |
CTGAAGCCAAGGAATATGCG+TGG | + | chr1_2:74967208-74967227 | Msa0092480:CDS | 50.0% | |
TTGACGCCACGCATATTCCT+TGG | - | chr1_2:74967217-74967236 | None:intergenic | 50.0% | |
TTCACCAGGAGTTGCTTCCT+CGG | - | chr1_2:74967305-74967324 | None:intergenic | 50.0% | |
CAAGATGCACAAAACCCGCA+AGG | + | chr1_2:74967957-74967976 | Msa0092480:intron | 50.0% | |
GGGGCAGAACACAATTAAGG+CGG | - | chr1_2:74968276-74968295 | None:intergenic | 50.0% | |
GATGTTGGAGGCTGCAATGA+AGG | - | chr1_2:74968328-74968347 | None:intergenic | 50.0% | |
! | GGGTGGATTTAGTCCCACAT+CGG | + | chr1_2:74968369-74968388 | Msa0092480:intron | 50.0% |
!! | CAAAACCGGCTTGTAAGGTG+AGG | - | chr1_2:74968438-74968457 | None:intergenic | 50.0% |
GGTTCTTGTACTGCGATGCT+AGG | + | chr1_2:74968869-74968888 | Msa0092480:CDS | 50.0% | |
!!! | TAGGGTTTTGGGGCGTGAAG+AGG | - | chr1_2:74964655-74964674 | None:intergenic | 55.0% |
TCACGCCCCAAAACCCTATC+TGG | + | chr1_2:74964657-74964676 | Msa0092480:CDS | 55.0% | |
CACGCCCCAAAACCCTATCT+GGG | + | chr1_2:74964658-74964677 | Msa0092480:CDS | 55.0% | |
ACAGGCCCTAGGTCATTAGG+TGG | + | chr1_2:74965328-74965347 | Msa0092480:intron | 55.0% | |
CAGGCCCTAGGTCATTAGGT+GGG | + | chr1_2:74965329-74965348 | Msa0092480:intron | 55.0% | |
GCTCTCCCACCTAATGACCT+AGG | - | chr1_2:74965337-74965356 | None:intergenic | 55.0% | |
!! | CCGATGACGTCGGCTCTTAA+AGG | - | chr1_2:74965393-74965412 | None:intergenic | 55.0% |
GTGAAAGTCGCCGATGACGT+CGG | - | chr1_2:74965403-74965422 | None:intergenic | 55.0% | |
GGAAACGACTACGTACAGGC+TGG | - | chr1_2:74965513-74965532 | None:intergenic | 55.0% | |
CGCAAGTCTCTCCCGCTTAA+TGG | - | chr1_2:74965610-74965629 | None:intergenic | 55.0% | |
! | TAGCTCTCCAACGAGGTGTC+AGG | + | chr1_2:74966059-74966078 | Msa0092480:intron | 55.0% |
! | AGCTCTCCAACGAGGTGTCA+GGG | + | chr1_2:74966060-74966079 | Msa0092480:intron | 55.0% |
! | CAACGAGGTGTCAGGGTTTG+CGG | + | chr1_2:74966067-74966086 | Msa0092480:intron | 55.0% |
! | AACGAGGTGTCAGGGTTTGC+GGG | + | chr1_2:74966068-74966087 | Msa0092480:intron | 55.0% |
ATGCGTGGCGTCAAGTCTTC+AGG | + | chr1_2:74967223-74967242 | Msa0092480:CDS | 55.0% | |
TGAACTTCTGTTCCCTCCCG+AGG | + | chr1_2:74967285-74967304 | Msa0092480:intron | 55.0% | |
TCACCAGGAGTTGCTTCCTC+GGG | - | chr1_2:74967304-74967323 | None:intergenic | 55.0% | |
TGATTGGGTTTGGCAGCCTC+AGG | - | chr1_2:74967367-74967386 | None:intergenic | 55.0% | |
TGAGGCTGCCAAACCCAATC+AGG | + | chr1_2:74967366-74967385 | Msa0092480:intron | 55.0% | |
GATGCACAAAACCCGCAAGG+AGG | + | chr1_2:74967960-74967979 | Msa0092480:intron | 55.0% | |
!! | TTGTGTTGGCTTTGAGGGGG+TGG | + | chr1_2:74968352-74968371 | Msa0092480:intron | 55.0% |
GCACTCCTCACCTTACAAGC+CGG | + | chr1_2:74968430-74968449 | Msa0092480:intron | 55.0% | |
!! | GACGTCGGCTCTTAAAGGGG+TGG | - | chr1_2:74965388-74965407 | None:intergenic | 60.0% |
CGCAAACCCTGACACCTCGT+TGG | - | chr1_2:74966069-74966088 | None:intergenic | 60.0% | |
CAGGAGTTGCTTCCTCGGGA+GGG | - | chr1_2:74967300-74967319 | None:intergenic | 60.0% | |
GGGTGCGGATGGGGATAGTT+AGG | + | chr1_2:74968199-74968218 | Msa0092480:intron | 60.0% | |
CCAGGAGTTGCTTCCTCGGG+AGG | - | chr1_2:74967301-74967320 | None:intergenic | 65.0% | |
CCTCCCGAGGAAGCAACTCC+TGG | + | chr1_2:74967298-74967317 | Msa0092480:intron | 65.0% | |
GCGTGCGTGTGGGTGCGGAT+GGG | + | chr1_2:74968189-74968208 | Msa0092480:intron | 70.0% | |
CGTGCGTGTGGGTGCGGATG+GGG | + | chr1_2:74968190-74968209 | Msa0092480:intron | 70.0% | |
TGTGGGTGCGCGCGTGCGTG+TGG | + | chr1_2:74968178-74968197 | Msa0092480:intron | 75.0% | |
GTGGGTGCGCGCGTGCGTGT+GGG | + | chr1_2:74968179-74968198 | Msa0092480:intron | 75.0% | |
TGCGCGCGTGCGTGTGGGTG+CGG | + | chr1_2:74968184-74968203 | Msa0092480:intron | 75.0% | |
CGCGTGCGTGTGGGTGCGGA+TGG | + | chr1_2:74968188-74968207 | Msa0092480:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_2 | gene | 74964516 | 74968961 | 74964516 | ID=Msa0092480;Name=Msa0092480 |
chr1_2 | mRNA | 74964516 | 74968961 | 74964516 | ID=Msa0092480-mRNA-1;Parent=Msa0092480;Name=Msa0092480-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|1|0|0.25|4|0|216 |
chr1_2 | exon | 74964516 | 74964759 | 74964516 | ID=Msa0092480-mRNA-1:exon:26377;Parent=Msa0092480-mRNA-1 |
chr1_2 | exon | 74964769 | 74964929 | 74964769 | ID=Msa0092480-mRNA-1:exon:26378;Parent=Msa0092480-mRNA-1 |
chr1_2 | exon | 74967181 | 74967282 | 74967181 | ID=Msa0092480-mRNA-1:exon:26379;Parent=Msa0092480-mRNA-1 |
chr1_2 | exon | 74968818 | 74968961 | 74968818 | ID=Msa0092480-mRNA-1:exon:26380;Parent=Msa0092480-mRNA-1 |
chr1_2 | CDS | 74964516 | 74964759 | 74964516 | ID=Msa0092480-mRNA-1:cds;Parent=Msa0092480-mRNA-1 |
chr1_2 | CDS | 74964769 | 74964929 | 74964769 | ID=Msa0092480-mRNA-1:cds;Parent=Msa0092480-mRNA-1 |
chr1_2 | CDS | 74967181 | 74967282 | 74967181 | ID=Msa0092480-mRNA-1:cds;Parent=Msa0092480-mRNA-1 |
chr1_2 | CDS | 74968818 | 74968961 | 74968818 | ID=Msa0092480-mRNA-1:cds;Parent=Msa0092480-mRNA-1 |
Gene Sequence |
Protein sequence |