AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0706430

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0706430 MtrunA17_Chr8g0385651 99.038 416 4 0 1 416 1 416 0.0 856
Msa0706430 MtrunA17_Chr8g0385671 95.673 416 18 0 1 416 1 416 0.0 829
Msa0706430 MtrunA17_Chr2g0320251 45.115 348 186 4 45 388 84 430 1.13e-101 309
Msa0706430 MtrunA17_Chr4g0028201 42.737 358 200 4 35 388 92 448 1.88e-101 309
Msa0706430 MtrunA17_Chr7g0265461 27.635 351 206 12 49 384 72 389 5.28e-32 125
Msa0706430 MtrunA17_Chr4g0055991 28.857 350 208 12 50 384 204 527 1.04e-31 126
Msa0706430 MtrunA17_Chr1g0179651 28.161 348 209 12 49 384 12 330 2.68e-31 122
Msa0706430 MtrunA17_Chr7g0265451 26.857 350 210 9 49 384 189 506 5.75e-31 124
Msa0706430 MtrunA17_Chr5g0411991 28.021 389 221 13 19 384 54 406 1.35e-29 119
Msa0706430 MtrunA17_Chr7g0265381 27.920 351 204 13 50 384 48 365 8.85e-29 115
Msa0706430 MtrunA17_Chr3g0137491 28.671 286 173 8 102 384 125 382 2.22e-28 115
Msa0706430 MtrunA17_Chr3g0119721 26.688 311 200 8 81 384 46 335 4.63e-28 113
Msa0706430 MtrunA17_Chr1g0197381 28.479 309 181 10 96 392 268 548 6.96e-28 115
Msa0706430 MtrunA17_Chr4g0064411 27.152 302 195 8 90 384 170 453 1.17e-27 114
Msa0706430 MtrunA17_Chr3g0120131 26.019 319 192 9 81 384 184 473 3.24e-27 113
Msa0706430 MtrunA17_Chr3g0131051 27.374 358 196 14 50 384 166 482 3.88e-27 113
Msa0706430 MtrunA17_Chr3g0140131 27.907 344 213 10 50 384 268 585 7.90e-27 112
Msa0706430 MtrunA17_Chr4g0064461 26.769 325 193 10 67 384 170 456 6.53e-26 109
Msa0706430 MtrunA17_Chr1g0146181 28.371 356 198 14 49 384 260 578 7.35e-25 107
Msa0706430 MtrunA17_Chr8g0390121 27.095 358 199 14 50 384 283 601 1.67e-24 105
Msa0706430 MtrunA17_Chr3g0140141 28.221 326 194 11 73 384 244 543 5.53e-24 104
Msa0706430 MtrunA17_Chr4g0064471 23.055 347 228 9 41 384 151 461 2.14e-23 102
Msa0706430 MtrunA17_Chr1g0173651 25.000 348 202 11 52 341 356 702 6.28e-23 101
Msa0706430 MtrunA17_Chr7g0253441 25.081 307 204 8 77 381 187 469 7.05e-21 94.7
Msa0706430 MtrunA17_Chr4g0039811 27.809 356 205 14 50 372 112 448 6.47e-19 88.6
Msa0706430 MtrunA17_Chr6g0460631 23.483 379 230 11 50 389 113 470 4.79e-18 86.3
Msa0706430 MtrunA17_Chr3g0092341 24.372 398 232 10 36 388 101 474 5.18e-16 79.7
Msa0706430 MtrunA17_Chr1g0200871 25.085 295 168 10 142 401 195 471 4.55e-13 70.9
Msa0706430 MtrunA17_Chr5g0421571 31.757 148 91 3 19 159 107 251 5.03e-13 69.7
Msa0706430 MtrunA17_Chr7g0254391 22.549 306 212 6 92 389 187 475 7.80e-13 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0706430 AT5G61840.1 91.133 406 35 1 11 416 11 415 0.0 775
Msa0706430 AT1G27440.1 88.279 401 46 1 16 416 13 412 0.0 746
Msa0706430 AT5G22940.1 42.179 358 200 4 50 400 109 466 1.15e-100 308
Msa0706430 AT5G22940.2 42.179 358 200 4 50 400 138 495 1.88e-100 308
Msa0706430 AT2G28110.1 42.897 359 196 6 42 394 86 441 4.59e-99 303
Msa0706430 AT5G37000.1 29.568 301 175 10 96 384 268 543 1.15e-31 127
Msa0706430 AT5G03795.1 30.286 350 207 13 49 388 189 511 5.29e-31 124
Msa0706430 AT4G38040.1 29.143 350 198 12 49 384 103 416 8.56e-31 122
Msa0706430 AT4G16745.1 29.179 329 193 13 73 384 218 523 7.95e-30 121
Msa0706430 AT5G11130.2 29.043 303 188 8 89 384 41 323 8.43e-30 118
Msa0706430 AT4G38040.2 30.225 311 169 10 49 345 103 379 2.00e-29 119
Msa0706430 AT5G11130.1 29.043 303 188 8 89 384 185 467 6.55e-29 118
Msa0706430 AT4G32790.1 27.954 347 212 13 49 384 266 585 5.14e-28 116
Msa0706430 AT4G32790.3 27.954 347 212 13 49 384 266 585 5.14e-28 116
Msa0706430 AT4G32790.2 27.954 347 212 13 49 384 266 585 5.14e-28 116
Msa0706430 AT5G25310.1 28.531 354 202 14 49 384 150 470 5.14e-28 115
Msa0706430 AT5G11610.1 27.457 346 212 9 50 384 220 537 5.57e-28 116
Msa0706430 AT4G16745.2 29.392 296 175 10 73 353 218 494 1.11e-27 115
Msa0706430 AT5G25820.1 28.693 352 203 15 50 384 324 644 1.26e-27 115
Msa0706430 AT3G42180.4 27.362 307 191 10 89 384 45 330 7.21e-26 107
Msa0706430 AT5G20260.1 26.689 296 191 7 96 384 48 324 2.03e-25 106
Msa0706430 AT5G20260.3 26.689 296 191 7 96 384 75 351 2.67e-25 106
Msa0706430 AT3G42180.1 27.362 307 191 10 89 384 174 459 3.05e-25 107
Msa0706430 AT5G19670.1 26.857 350 210 14 50 384 281 599 6.59e-25 107
Msa0706430 AT5G19670.2 26.857 350 210 14 50 384 281 599 6.59e-25 107
Msa0706430 AT5G20260.2 26.689 296 191 7 96 384 180 456 1.27e-24 105
Msa0706430 AT5G33290.1 29.699 266 156 10 126 384 248 489 6.12e-24 103
Msa0706430 AT3G07620.1 26.821 302 187 9 93 384 172 449 2.19e-23 102
Msa0706430 AT5G16890.1 25.424 354 216 12 50 372 118 454 3.40e-21 95.9
Msa0706430 AT1G67410.1 24.934 377 230 11 50 390 53 412 6.18e-21 94.7
Msa0706430 AT3G45400.1 25.325 308 205 9 90 389 151 441 9.79e-15 76.3
Msa0706430 AT2G35100.1 24.156 385 216 19 49 389 59 411 1.08e-14 75.9
Msa0706430 AT3G03650.1 24.528 318 198 10 90 389 190 483 1.69e-14 75.5
Msa0706430 AT1G74680.1 22.917 384 231 11 50 389 75 437 4.44e-13 71.2

Find 193 sgRNAs with CRISPR-Local

Find 908 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCTTCAAATTGGCCTTAT+TGG 0.102741 4_4:+79402675 Msa0706430:CDS
TGATTACCACTTTATTATTT+TGG 0.154260 4_4:+79404629 Msa0706430:three_prime_UTR
ACCGACCCCTATGAACATTT+TGG 0.163679 4_4:-79404086 None:intergenic
AATCAGCTTCTTCAGGATTA+AGG 0.174499 4_4:-79402553 None:intergenic
AAAACTGCTACCAAGGTTTA+AGG 0.176700 4_4:-79404014 None:intergenic
ATCTCCTGATTGTGCGGGTT+GGG 0.180030 4_4:-79403881 None:intergenic
CAACCTACTGAAAGAATTTC+AGG 0.205977 4_4:+79399516 Msa0706430:CDS
TTGTGGTTCCTCATGACTTT+GGG 0.215552 4_4:+79402726 Msa0706430:CDS
CATATCATAGCTTGTTGTTT+TGG 0.231738 4_4:+79404403 Msa0706430:three_prime_UTR
CATCATTCGAGGCGACTTAA+AGG 0.233456 4_4:-79402633 None:intergenic
TACAACTTATTTCTTCAAAT+TGG 0.241087 4_4:+79402666 Msa0706430:CDS
GTGTCTGTGTGTGTGGATTT+AGG 0.251600 4_4:+79404470 Msa0706430:three_prime_UTR
GCTACCTTGGTTCAAACATT+TGG 0.286641 4_4:+79402936 Msa0706430:CDS
AACATTGCTTGCTTCATAGA+AGG 0.295573 4_4:-79403853 None:intergenic
GCCTTCCATCAAGTTCTAAA+TGG 0.295689 4_4:+79403904 Msa0706430:CDS
AAAATGGGTATTTGGAAATT+GGG 0.306965 4_4:+79399429 Msa0706430:exon
GAGAGTAGCGAAGTTGAAAA+TGG 0.315479 4_4:-79392166 None:intergenic
TCCTGCTAAAATCTAAATAC+TGG 0.321872 4_4:-79404547 None:intergenic
TTGGATTCAAGCTTGTCTTT+AGG 0.328560 4_4:+79404571 Msa0706430:three_prime_UTR
AGCGGTGTGGGAGAACTTTA+AGG 0.332947 4_4:+79403528 Msa0706430:CDS
ATCAGCTTCTTCAGGATTAA+GGG 0.335863 4_4:-79402552 None:intergenic
GTGGGAGATTTCTTAGAAAT+GGG 0.337748 4_4:-79392281 None:intergenic
AACATATGGGTTAGGCATCT+TGG 0.349568 4_4:-79402479 None:intergenic
CAAGTCCATTTAGAACTTGA+TGG 0.350985 4_4:-79403909 None:intergenic
TCTCCTGATTGTGCGGGTTG+GGG 0.353405 4_4:-79403880 None:intergenic
AGATCAATCATGTAGCAAAT+TGG 0.353942 4_4:-79404187 None:intergenic
TAAAACCAATCAGCTTCTTC+AGG 0.355917 4_4:-79402560 None:intergenic
ACCACAGCTTCAACCAATCT+TGG 0.366518 4_4:-79403655 None:intergenic
TGTGGGAGATTTCTTAGAAA+TGG 0.366861 4_4:-79392282 None:intergenic
TTGGTTGAAGCTGTGGTATT+TGG 0.367168 4_4:+79403661 Msa0706430:CDS
TTTGTGGTTCCTCATGACTT+TGG 0.372681 4_4:+79402725 Msa0706430:CDS
AGATCTCAGCAGCAAACATA+TGG 0.376928 4_4:-79402493 None:intergenic
CTTGCATAATAACCACCTTC+AGG 0.377203 4_4:-79403110 None:intergenic
CTACCTTGGTTCAAACATTT+GGG 0.381929 4_4:+79402937 Msa0706430:CDS
GCTGCTGCGGCGTGCTACCT+TGG 0.382050 4_4:+79402923 Msa0706430:CDS
TGTTTCCTTAGTATAACTTC+TGG 0.382496 4_4:-79403814 None:intergenic
CCCTCTGTTCGGTTCCAATA+AGG 0.384026 4_4:-79402689 None:intergenic
AAGTCACAGGTGGTGTATAC+AGG 0.384394 4_4:-79402587 None:intergenic
CTTCTTCAGGATTAAGGGTT+CGG 0.385048 4_4:-79402547 None:intergenic
TAGCTGGAAGGAAAGGGAAA+TGG 0.387658 4_4:-79392245 None:intergenic
GAGGGGTATTGTAATTGTGT+GGG 0.391814 4_4:-79392087 None:intergenic
TTATGATTCTTTATATGTCT+TGG 0.402929 4_4:+79404053 Msa0706430:three_prime_UTR
ACCTGTGACTTGACACCAAA+TGG 0.407155 4_4:+79402599 Msa0706430:CDS
TTTCTTGTTCTGATGATAGT+TGG 0.408620 4_4:+79404315 Msa0706430:three_prime_UTR
CATCTCCTGATTGTGCGGGT+TGG 0.410206 4_4:-79403882 None:intergenic
ATATCATCGGCAATAATAAC+AGG 0.410609 4_4:-79403691 None:intergenic
TTCAACCAATCTTGGGCTCC+AGG 0.410705 4_4:-79403647 None:intergenic
ATTTGAAGAAATAAGTTGTA+TGG 0.413913 4_4:-79402663 None:intergenic
GATATGCTTGAAGTCTCAAT+TGG 0.414862 4_4:-79404386 None:intergenic
GAAAACAGACACTCCTACTA+AGG 0.414930 4_4:-79404240 None:intergenic
AAGGGTAAAGGGAGGCCATT+TGG 0.417277 4_4:-79402614 None:intergenic
AGAGGGGTATTGTAATTGTG+TGG 0.419310 4_4:-79392088 None:intergenic
CAAGGTTTAAGGTCGCCAAC+AGG 0.419697 4_4:-79404003 None:intergenic
GTGTGGATTTAGGTTAGGTT+AGG 0.419775 4_4:+79404480 Msa0706430:three_prime_UTR
CAAATTTAGTCAACAGAAGA+AGG 0.421111 4_4:-79392335 None:intergenic
CAATACCGTGGGAAGAGATC+GGG 0.421402 4_4:+79403734 Msa0706430:CDS
AGCTGGAAGGAAAGGGAAAT+GGG 0.425156 4_4:-79392244 None:intergenic
ACATATGGGTTAGGCATCTT+GGG 0.425565 4_4:-79402478 None:intergenic
TCTTAGAAATGGGGTTTCAA+TGG 0.428869 4_4:-79392271 None:intergenic
ATCCTCCCCAAAATGTTCAT+AGG 0.429719 4_4:+79404079 Msa0706430:three_prime_UTR
TTTCTCTTGTGTCACGGCAT+TGG 0.430557 4_4:+79404259 Msa0706430:three_prime_UTR
AGGTGCAAGAGCAGCGGTGT+GGG 0.432542 4_4:+79403516 Msa0706430:CDS
TTGGAAAATAAGAGTCATAA+TGG 0.441627 4_4:+79404278 Msa0706430:three_prime_UTR
AAGGGGAGAAGAGCTTGAAT+TGG 0.443074 4_4:+79403971 Msa0706430:CDS
TGGTGGGATCGATGTGAGTA+TGG 0.450775 4_4:-79403794 None:intergenic
TGTGTGTGTGGATTTAGGTT+AGG 0.451242 4_4:+79404475 Msa0706430:three_prime_UTR
TTAATCCTGAAGAAGCTGAT+TGG 0.455161 4_4:+79402555 Msa0706430:CDS
ATCATTCGAGGCGACTTAAA+GGG 0.456095 4_4:-79402632 None:intergenic
TTCTGAGAAGCAACAGAGAC+AGG 0.456845 4_4:-79392218 None:intergenic
AGGGAAAGTAGTTGTGTTGT+GGG 0.457301 4_4:-79392299 None:intergenic
TAGTCAACAGAAGAAGGTTA+AGG 0.459446 4_4:-79392329 None:intergenic
CAACCAATCTTGGGCTCCAG+GGG 0.460367 4_4:-79403645 None:intergenic
GGGGTTTCAATGGAATTAGC+TGG 0.462075 4_4:-79392261 None:intergenic
TTGTCTATGCCCACTTGGAT+GGG 0.465656 4_4:+79403621 Msa0706430:CDS
TTTGTCTATGCCCACTTGGA+TGG 0.466748 4_4:+79403620 Msa0706430:CDS
TTAGGAAGAAGTGTCAAATC+TGG 0.467946 4_4:+79404498 Msa0706430:three_prime_UTR
CACGGTATTGCATCGGCAAA+CGG 0.471872 4_4:-79403721 None:intergenic
AAGCTATCTACCACCCTACC+TGG 0.472732 4_4:-79404724 None:intergenic
TCCTCCCCAAAATGTTCATA+GGG 0.473430 4_4:+79404080 Msa0706430:three_prime_UTR
TGCTTGCTTCATAGAAGGGT+TGG 0.477612 4_4:-79403848 None:intergenic
TTCCTTAGTATAACTTCTGG+TGG 0.480532 4_4:-79403811 None:intergenic
TCTAGACTCATACTTGGTAA+TGG 0.480817 4_4:-79402757 None:intergenic
AATGATCGGCTCCCTCTGTT+CGG 0.484122 4_4:-79402700 None:intergenic
TCTAGTTTATTCTCCAGGTA+GGG 0.489257 4_4:+79404711 Msa0706430:three_prime_UTR
GTAATTCTAGTTTATTCTCC+AGG 0.490086 4_4:+79404706 Msa0706430:three_prime_UTR
ATGGAATTAGCTGGAAGGAA+AGG 0.490515 4_4:-79392252 None:intergenic
GAGGCGACTTAAAGGGTAAA+GGG 0.490626 4_4:-79402625 None:intergenic
CGGGGTGTTTGTTGATGAGC+AGG 0.491978 4_4:+79403753 Msa0706430:CDS
AGGTAGTGCTGGTGATGTAT+TGG 0.493276 4_4:+79402376 Msa0706430:intron
ACATTGCTTGCTTCATAGAA+GGG 0.496136 4_4:-79403852 None:intergenic
TTGCATAATAACCACCTTCA+GGG 0.496241 4_4:-79403109 None:intergenic
TGATCCGGTTGGAAGGTTGA+AGG 0.497770 4_4:+79402403 Msa0706430:CDS
GGGAGCCGATCATTTCTTTG+TGG 0.498580 4_4:+79402709 Msa0706430:CDS
TGTGGTTCCTCATGACTTTG+GGG 0.499739 4_4:+79402727 Msa0706430:CDS
AATTGGACTGCTGGCCCTGT+TGG 0.500040 4_4:+79403988 Msa0706430:CDS
TGGAATTAGCTGGAAGGAAA+GGG 0.502294 4_4:-79392251 None:intergenic
AAAACCTTCAACCTTCCAAC+CGG 0.502517 4_4:-79402407 None:intergenic
CCACAGCTTCAACCAATCTT+GGG 0.502883 4_4:-79403654 None:intergenic
TCCTTAGTATAACTTCTGGT+GGG 0.503457 4_4:-79403810 None:intergenic
TCAACCAATCTTGGGCTCCA+GGG 0.504298 4_4:-79403646 None:intergenic
CTACCTGAAATTCTTTCAGT+AGG 0.506228 4_4:-79399519 None:intergenic
CTGTTGGCGACCTTAAACCT+TGG 0.507487 4_4:+79404004 Msa0706430:CDS
CAGCAGCAAACATATGGGTT+AGG 0.507985 4_4:-79402487 None:intergenic
TCTCATGAAAGATATTAGTC+TGG 0.508501 4_4:+79404677 Msa0706430:three_prime_UTR
TGTGAGTATGGTATCCAACT+TGG 0.508722 4_4:-79403782 None:intergenic
AGGTAGGGTGGTAGATAGCT+TGG 0.508805 4_4:+79404726 Msa0706430:three_prime_UTR
TGCTGCAAAAGAAGTAGTAA+AGG 0.509311 4_4:-79399370 None:intergenic
GACTGTTAAAACTGCTACCA+AGG 0.509613 4_4:-79404021 None:intergenic
CTGCTGAGATCTTTATGCAC+CGG 0.510746 4_4:+79402504 Msa0706430:CDS
GCCATTTGGTGTCAAGTCAC+AGG 0.510932 4_4:-79402600 None:intergenic
AGGGGTATTGTAATTGTGTG+GGG 0.512295 4_4:-79392086 None:intergenic
CGAGGCGACTTAAAGGGTAA+AGG 0.512868 4_4:-79402626 None:intergenic
CTCCTGATTGTGCGGGTTGG+GGG 0.514631 4_4:-79403879 None:intergenic
GCAATACCGTGGGAAGAGAT+CGG 0.515153 4_4:+79403733 Msa0706430:CDS
GCTGCAAAAGAAGTAGTAAA+GGG 0.516288 4_4:-79399369 None:intergenic
TCTGGCTTGCTTAGAAGAAA+CGG 0.518888 4_4:+79404516 Msa0706430:three_prime_UTR
TGGTTCAAACATTTGGGCAG+AGG 0.523047 4_4:+79402943 Msa0706430:CDS
AAGAGCTTGAATTGGACTGC+TGG 0.524717 4_4:+79403979 Msa0706430:CDS
CACGGAAGTTGCCACATGAC+AGG 0.525758 4_4:+79403932 Msa0706430:CDS
GAACTAATTGTAGGTAGTGC+TGG 0.526058 4_4:+79402365 Msa0706430:intron
CAGCGCTAGATAAGAGAAAC+CGG 0.530862 4_4:-79402523 None:intergenic
TAAAGAATCATAATCGCCTC+AGG 0.531284 4_4:-79404043 None:intergenic
AAGAAGGTTAAGGTGTCGTA+AGG 0.533148 4_4:-79392319 None:intergenic
ATGGCACTTCTCATCATTCG+AGG 0.534980 4_4:-79402644 None:intergenic
AAAACTCCAAAATAATAAAG+TGG 0.535449 4_4:-79404635 None:intergenic
TGAGCAGGATGTTCCCAAGT+TGG 0.535887 4_4:+79403768 Msa0706430:CDS
CAACATCATAAAACAGTCCT+CGG 0.537401 4_4:-79403079 None:intergenic
AAGGGAAAGTAGTTGTGTTG+TGG 0.539252 4_4:-79392300 None:intergenic
CCCAAAATGTTCATAGGGGT+CGG 0.539812 4_4:+79404085 Msa0706430:three_prime_UTR
ATGTCCTCGTAATATGTTGT+TGG 0.543592 4_4:-79403583 None:intergenic
TCCCACCAGAAGTTATACTA+AGG 0.543860 4_4:+79403809 Msa0706430:CDS
TTGATGCTGTTGAGCTTCGT+AGG 0.545962 4_4:+79399490 Msa0706430:CDS
CCCAAGATTGGTTGAAGCTG+TGG 0.547702 4_4:+79403654 Msa0706430:CDS
TGGGAGATTTCTTAGAAATG+GGG 0.550635 4_4:-79392280 None:intergenic
TGATGTATTGGAAGATGATC+CGG 0.554892 4_4:+79402388 Msa0706430:CDS
TTCTAGTTTATTCTCCAGGT+AGG 0.556035 4_4:+79404710 Msa0706430:three_prime_UTR
AAGGTAGCACGCCGCAGCAG+CGG 0.559783 4_4:-79402921 None:intergenic
GATCTCAGCAGCAAACATAT+GGG 0.560809 4_4:-79402492 None:intergenic
GAAGAGAAGGCAATTGAAAG+AGG 0.561536 4_4:+79402891 Msa0706430:CDS
GCTAAAATCTAAATACTGGA+AGG 0.562081 4_4:-79404543 None:intergenic
TCCACTATTTGACATTTCGA+CGG 0.565695 4_4:+79403555 Msa0706430:CDS
AGTCACAGGTGGTGTATACA+GGG 0.565897 4_4:-79402586 None:intergenic
GAAGGCATCTCCTGATTGTG+CGG 0.568643 4_4:-79403887 None:intergenic
CTCTTCCCACGGTATTGCAT+CGG 0.576123 4_4:-79403728 None:intergenic
AGGAGTGTATTCTTGAAACA+AGG 0.576573 4_4:+79403952 Msa0706430:CDS
TGGAAGATGATCCGGTTGGA+AGG 0.577407 4_4:+79402396 Msa0706430:CDS
TCCATTTAGAACTTGATGGA+AGG 0.586348 4_4:-79403905 None:intergenic
AATCATGTGTGCTTGAAAGA+TGG 0.587027 4_4:+79402966 Msa0706430:CDS
AGTTTATTCTCCAGGTAGGG+TGG 0.587529 4_4:+79404714 Msa0706430:three_prime_UTR
TTCTGTGGTGGAGCATATGG+AGG 0.588062 4_4:-79403002 None:intergenic
CTGAAGGTGGTTATTATGCA+AGG 0.592317 4_4:+79403111 Msa0706430:CDS
TCCGTCGAAATGTCAAATAG+TGG 0.596017 4_4:-79403556 None:intergenic
AACCAATCTTGGGCTCCAGG+GGG 0.599952 4_4:-79403644 None:intergenic
CCTTATTGGAACCGAACAGA+GGG 0.603172 4_4:+79402689 Msa0706430:CDS
GTGAGTATGGTATCCAACTT+GGG 0.606039 4_4:-79403781 None:intergenic
GAGGGATTCTTCCGCTGCTG+CGG 0.606476 4_4:+79402910 Msa0706430:CDS
GAGGTGCAAGAGCAGCGGTG+TGG 0.609121 4_4:+79403515 Msa0706430:intron
AAGAAGATGAAGATTGACGA+AGG 0.609486 4_4:-79392127 None:intergenic
AGGAACCACAAAGAAATGAT+CGG 0.611291 4_4:-79402714 None:intergenic
AAGAGAAGGCAATTGAAAGA+GGG 0.624340 4_4:+79402892 Msa0706430:CDS
TTCATAGGGGTCGGTAACCG+AGG 0.626269 4_4:+79404094 Msa0706430:three_prime_UTR
AAGGTTTAAGGTCGCCAACA+GGG 0.626386 4_4:-79404002 None:intergenic
GGGTCTTATCAGGAATCAAG+TGG 0.630713 4_4:-79403034 None:intergenic
AAGTTCTAAATGGACTTGCA+CGG 0.631519 4_4:+79403914 Msa0706430:CDS
AAGGCATCTCCTGATTGTGC+GGG 0.633255 4_4:-79403886 None:intergenic
TGGTGGAGCATATGGAGGAA+TGG 0.634234 4_4:-79402997 None:intergenic
GCCTTATTGGAACCGAACAG+AGG 0.636673 4_4:+79402688 Msa0706430:CDS
AAACGGTAGAACAATATCAT+CGG 0.636948 4_4:-79403704 None:intergenic
AGAGACAGGTTAGAAGAGTG+AGG 0.637698 4_4:-79392204 None:intergenic
ATTTGGTGTCAAGTCACAGG+TGG 0.641622 4_4:-79402597 None:intergenic
AAGAATACACTCCTGTCATG+TGG 0.646047 4_4:-79403943 None:intergenic
AGAAGGTTAAGGTGTCGTAA+GGG 0.647502 4_4:-79392318 None:intergenic
CTGCCCAAATGTTTGAACCA+AGG 0.647947 4_4:-79402940 None:intergenic
AAGTTGAAAATGGAAGAGTG+TGG 0.648104 4_4:-79392156 None:intergenic
AACACCCCGATCTCTTCCCA+CGG 0.650716 4_4:-79403739 None:intergenic
GGAGTGTATTCTTGAAACAA+GGG 0.652265 4_4:+79403953 Msa0706430:CDS
GTTTGCCGATGCAATACCGT+GGG 0.652759 4_4:+79403723 Msa0706430:CDS
TAAAGAGAAAAGCAACACAA+AGG 0.657048 4_4:-79399464 None:intergenic
AAACATGCCCCAAAGTCATG+AGG 0.658104 4_4:-79402734 None:intergenic
GGTCTTATCAGGAATCAAGT+GGG 0.661427 4_4:-79403033 None:intergenic
AATACCGTGGGAAGAGATCG+GGG 0.662810 4_4:+79403735 Msa0706430:CDS
TAACAGAGGTGCAAGAGCAG+CGG 0.662972 4_4:+79403510 Msa0706430:intron
AAGTGGGCATAGACAAAACA+CGG 0.670823 4_4:-79403614 None:intergenic
TTTCAATGGAATTAGCTGGA+AGG 0.674164 4_4:-79392257 None:intergenic
CGTTTGCCGATGCAATACCG+TGG 0.699810 4_4:+79403722 Msa0706430:CDS
GCATCCAACAACATATTACG+AGG 0.700041 4_4:+79403579 Msa0706430:CDS
GAGTGTATTCTTGAAACAAG+GGG 0.700993 4_4:+79403954 Msa0706430:CDS
GTTGGAAATGACCCTGAAGG+TGG 0.701807 4_4:+79403098 Msa0706430:CDS
CCTCCCCAAAATGTTCATAG+GGG 0.703947 4_4:+79404081 Msa0706430:three_prime_UTR
GCGACTTAAAGGGTAAAGGG+AGG 0.710948 4_4:-79402622 None:intergenic
GATGTTGGAAATGACCCTGA+AGG 0.717539 4_4:+79403095 Msa0706430:CDS
GTATTGGAAGATGATCCGGT+TGG 0.718257 4_4:+79402392 Msa0706430:CDS
GTCACAGGTGGTGTATACAG+GGG 0.728508 4_4:-79402585 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTTTTTTTTTTAAA+AGG + chr4_4:79397820-79397839 Msa0706430:intron 0.0%
!!! TAATTTTAAAATTATCTACA+TGG + chr4_4:79393270-79393289 Msa0706430:intron 10.0%
!!! AATTTTTATCAATTTCTTTA+TGG + chr4_4:79399578-79399597 Msa0706430:intron 10.0%
!! TTTGAAAATTTATAATTGTA+CGG + chr4_4:79400385-79400404 Msa0706430:intron 10.0%
!!! TTTTATTATTATTTTGTTTC+AGG + chr4_4:79402869-79402888 Msa0706430:intron 10.0%
!!! TTTTTCTTCCAATAAAAAAT+GGG + chr4_4:79392404-79392423 Msa0706430:intron 15.0%
!! TAAAATTAAAATTGCAAGTT+TGG - chr4_4:79393258-79393277 None:intergenic 15.0%
!!! TATTTTAAGACATATCTTTT+AGG + chr4_4:79393725-79393744 Msa0706430:intron 15.0%
!!! ATTTTAAGACATATCTTTTA+GGG + chr4_4:79393726-79393745 Msa0706430:intron 15.0%
!!! ATTTTCTTGTTATATTTACT+TGG - chr4_4:79394172-79394191 None:intergenic 15.0%
!!! CTTATTTTTATGAACATTTA+GGG - chr4_4:79395776-79395795 None:intergenic 15.0%
!!! CATTGTAAATTTTGATATTT+TGG + chr4_4:79395843-79395862 Msa0706430:intron 15.0%
!!! TCATTTTTCAAATTGTTTAT+TGG + chr4_4:79397439-79397458 Msa0706430:intron 15.0%
!! AAAAAAAAAAATCCATACAA+AGG - chr4_4:79397812-79397831 None:intergenic 15.0%
!! CATAAAATATAATACTGATA+GGG - chr4_4:79398080-79398099 None:intergenic 15.0%
!! TCATAAAATATAATACTGAT+AGG - chr4_4:79398081-79398100 None:intergenic 15.0%
!!! ACTATTTTAAGCAATATTTT+TGG + chr4_4:79398115-79398134 Msa0706430:intron 15.0%
!! TTATAAATTCACAATAAAAG+TGG + chr4_4:79398218-79398237 Msa0706430:intron 15.0%
!!! AAATTTTGAACTTTTTTTTC+TGG + chr4_4:79398607-79398626 Msa0706430:intron 15.0%
!!! AATTTGATAATTTTGTAAAG+AGG + chr4_4:79398806-79398825 Msa0706430:intron 15.0%
!! TAATATAAAGAAGTCAAATT+TGG - chr4_4:79392352-79392371 None:intergenic 15.0%
!!! ATAAAGTTTATTCTTTTCTT+GGG + chr4_4:79399398-79399417 Msa0706430:five_prime_UTR 15.0%
!!! TGATTTGATTATTTTTGTTT+AGG + chr4_4:79399550-79399569 Msa0706430:intron 15.0%
!! TAATCATTGAAATTATAACA+TGG - chr4_4:79399754-79399773 None:intergenic 15.0%
!! GTTATAATTTCAATGATTAA+AGG + chr4_4:79399755-79399774 Msa0706430:intron 15.0%
!! TTTGATGTTTAAATATTAGT+TGG - chr4_4:79399984-79400003 None:intergenic 15.0%
!!! TTCAAAAAACATTTATTTTG+AGG - chr4_4:79400222-79400241 None:intergenic 15.0%
!! TTGAAAATTTATAATTGTAC+GGG + chr4_4:79400386-79400405 Msa0706430:intron 15.0%
!!! ATTGATTATTGATTGAAAAA+AGG + chr4_4:79400566-79400585 Msa0706430:intron 15.0%
!!! TAATAAGAAAATTTTGCAAA+AGG + chr4_4:79402454-79402473 Msa0706430:CDS 15.0%
!!! TAAAATAAAAGTGTGTTATA+TGG - chr4_4:79402854-79402873 None:intergenic 15.0%
!!! ACATTGTAAATTTTGATATA+CGG + chr4_4:79404133-79404152 Msa0706430:three_prime_UTR 15.0%
!!! CATTTTTTATTGGAAGAAAA+AGG - chr4_4:79392405-79392424 None:intergenic 20.0%
!!! CTTTTTCTTCCAATAAAAAA+TGG + chr4_4:79392403-79392422 Msa0706430:intron 20.0%
!!! ATTTCCAAATTCAGTTTTTT+AGG + chr4_4:79392428-79392447 Msa0706430:intron 20.0%
!!! TTTCCAAATTCAGTTTTTTA+GGG + chr4_4:79392429-79392448 Msa0706430:intron 20.0%
!! AAATAAAATGGTGATAATCA+TGG - chr4_4:79393125-79393144 None:intergenic 20.0%
!!! TGATTATCACCATTTTATTT+AGG + chr4_4:79393125-79393144 Msa0706430:intron 20.0%
!! TATCAGAACATATCAAATAA+GGG - chr4_4:79393480-79393499 None:intergenic 20.0%
!! GATCAAGTAATTTAATTCTT+GGG - chr4_4:79393845-79393864 None:intergenic 20.0%
!! TGATCAAGTAATTTAATTCT+TGG - chr4_4:79393846-79393865 None:intergenic 20.0%
!!! ATTTTATTTTCGAGAAATAG+TGG + chr4_4:79393967-79393986 Msa0706430:intron 20.0%
!!! AACATAAACTATTTTGTTTC+AGG + chr4_4:79394598-79394617 Msa0706430:intron 20.0%
!!! TTTTGTGTCGTTATTAAAAT+TGG + chr4_4:79395016-79395035 Msa0706430:intron 20.0%
!!! ATTGATGACCTAAATAAAAT+TGG + chr4_4:79395070-79395089 Msa0706430:intron 20.0%
!!! TGAACAAACCAATTTTATTT+AGG - chr4_4:79395081-79395100 None:intergenic 20.0%
!!! CCTTATTTTTATGAACATTT+AGG - chr4_4:79395777-79395796 None:intergenic 20.0%
!! CCTAAATGTTCATAAAAATA+AGG + chr4_4:79395774-79395793 Msa0706430:intron 20.0%
!! ATCAAATTTCAAGATTAGAA+TGG + chr4_4:79396039-79396058 Msa0706430:intron 20.0%
!! TCAAATTTCAAGATTAGAAT+GGG + chr4_4:79396040-79396059 Msa0706430:intron 20.0%
!!! TTGAATGACTTTTGTAATAA+TGG + chr4_4:79396147-79396166 Msa0706430:intron 20.0%
!! TCATTGTAACAAAAAAACAA+AGG - chr4_4:79396684-79396703 None:intergenic 20.0%
!! ACTTATAATTGTCAGTATTT+AGG + chr4_4:79396781-79396800 Msa0706430:intron 20.0%
!! CTTATAATTGTCAGTATTTA+GGG + chr4_4:79396782-79396801 Msa0706430:intron 20.0%
!! ATAACTGATATAAGTAACAA+AGG - chr4_4:79397729-79397748 None:intergenic 20.0%
!!! TTATATTTTATGAGTGTGAT+TGG + chr4_4:79398088-79398107 Msa0706430:intron 20.0%
!!! ATCTATATATGCAATTTTAG+TGG + chr4_4:79398386-79398405 Msa0706430:intron 20.0%
!!! CATAAAGTTTATTCTTTTCT+TGG + chr4_4:79399397-79399416 Msa0706430:five_prime_UTR 20.0%
!!! TAAAGTTTATTCTTTTCTTG+GGG + chr4_4:79399399-79399418 Msa0706430:five_prime_UTR 20.0%
!! TTATCAATTTCTTTATGGTT+AGG + chr4_4:79399583-79399602 Msa0706430:intron 20.0%
!! TATTATGAATGTGTTTGATT+AGG + chr4_4:79399673-79399692 Msa0706430:intron 20.0%
!! AATTTCAATGATTAAAGGAT+TGG + chr4_4:79399760-79399779 Msa0706430:intron 20.0%
!! TTAAAACATTTCCTTAGATT+AGG + chr4_4:79399891-79399910 Msa0706430:intron 20.0%
!!! CTTTAGGGTTAATTAATAAT+TGG - chr4_4:79399956-79399975 None:intergenic 20.0%
!!! TTAAAGGTTTGTTAAAAACT+TGG - chr4_4:79400169-79400188 None:intergenic 20.0%
!! TTAGATAGAACATCAATATA+GGG - chr4_4:79400719-79400738 None:intergenic 20.0%
!!! CTCTAAGATACAAATTTTAA+GGG - chr4_4:79401034-79401053 None:intergenic 20.0%
!!! TCTCTAAGATACAAATTTTA+AGG - chr4_4:79401035-79401054 None:intergenic 20.0%
!!! AATTCAGAAATGGAAATTTT+TGG - chr4_4:79401216-79401235 None:intergenic 20.0%
!! AATTTCCATTTCTGAATTAA+TGG + chr4_4:79401218-79401237 Msa0706430:intron 20.0%
!! ATTTCCATTTCTGAATTAAT+GGG + chr4_4:79401219-79401238 Msa0706430:intron 20.0%
!! TAACAAAACATTTCTTAAAC+TGG - chr4_4:79401737-79401756 None:intergenic 20.0%
!!! TAAGCTTCTAAAACAATTAA+TGG - chr4_4:79401930-79401949 None:intergenic 20.0%
!!! TAATAGATTGGTAATTTCTA+AGG + chr4_4:79402111-79402130 Msa0706430:intron 20.0%
!!! TATATATTCTAAGCATTTTG+TGG + chr4_4:79402340-79402359 Msa0706430:intron 20.0%
!!! ATTTTCTTATTATACTTGCT+TGG - chr4_4:79402446-79402465 None:intergenic 20.0%
!! ATTTGAAGAAATAAGTTGTA+TGG - chr4_4:79402666-79402685 None:intergenic 20.0%
!!! TACAACTTATTTCTTCAAAT+TGG + chr4_4:79402666-79402685 Msa0706430:CDS 20.0%
!! TTATGATTCTTTATATGTCT+TGG + chr4_4:79404053-79404072 Msa0706430:three_prime_UTR 20.0%
!!! CATTGTAAATTTTGATATAC+GGG + chr4_4:79404134-79404153 Msa0706430:three_prime_UTR 20.0%
!!! TGATTACCACTTTATTATTT+TGG + chr4_4:79404629-79404648 Msa0706430:three_prime_UTR 20.0%
!! AAAACTCCAAAATAATAAAG+TGG - chr4_4:79404638-79404657 None:intergenic 20.0%
!! TTTTTATTGGAAGAAAAAGG+TGG - chr4_4:79392402-79392421 None:intergenic 25.0%
!!! TGGAAATACCCATTTTTTAT+TGG - chr4_4:79392415-79392434 None:intergenic 25.0%
! AAACCCTAAAAAACTGAATT+TGG - chr4_4:79392435-79392454 None:intergenic 25.0%
! CATGGCAAACAAAAAAAAAA+TGG - chr4_4:79392560-79392579 None:intergenic 25.0%
! ATCAACATAACTATAGAACA+TGG - chr4_4:79392578-79392597 None:intergenic 25.0%
!!! ATAGTTATGTTGATTTGAGT+TGG + chr4_4:79392584-79392603 Msa0706430:intron 25.0%
!! GGTTTGAATTTTTCATGTTA+TGG + chr4_4:79392647-79392666 Msa0706430:intron 25.0%
! TATTTATTGCATCAATTGAC+TGG + chr4_4:79392747-79392766 Msa0706430:intron 25.0%
! AGTTGCAACTAATATATAAC+TGG - chr4_4:79393156-79393175 None:intergenic 25.0%
!!! ATGGTTGAATTTTTTGAAGA+TGG + chr4_4:79393289-79393308 Msa0706430:intron 25.0%
!! ATCATATCCTGTATTTTTCA+AGG + chr4_4:79393443-79393462 Msa0706430:intron 25.0%
! GTATCAGAACATATCAAATA+AGG - chr4_4:79393481-79393500 None:intergenic 25.0%
! AAAGATAATCCAAGCAAATT+GGG + chr4_4:79393589-79393608 Msa0706430:intron 25.0%
!! CATAACTTTCATGTTTTCAT+TGG - chr4_4:79393648-79393667 None:intergenic 25.0%
! CAATGAAAACATGAAAGTTA+TGG + chr4_4:79393646-79393665 Msa0706430:intron 25.0%
! TGGTAATCTAATATATCCAA+TGG + chr4_4:79393666-79393685 Msa0706430:intron 25.0%
!!! TCTTGTGTATTGTTTCTAAT+TGG + chr4_4:79393932-79393951 Msa0706430:intron 25.0%
! TAACAAGAAAATTCTGCAAA+AGG + chr4_4:79394180-79394199 Msa0706430:intron 25.0%
! GTTTGAAGAAATAAGTTGTA+TGG - chr4_4:79394392-79394411 None:intergenic 25.0%
!! TACAACTTATTTCTTCAAAC+TGG + chr4_4:79394392-79394411 Msa0706430:intron 25.0%
!!! TTCTCAAGATAGCTTTAAAA+TGG - chr4_4:79394537-79394556 None:intergenic 25.0%
! AAGTATACAAAAATAGACCT+GGG - chr4_4:79394788-79394807 None:intergenic 25.0%
! AAAGTATACAAAAATAGACC+TGG - chr4_4:79394789-79394808 None:intergenic 25.0%
!!! TCTATTTTTGTATACTTTCG+AGG + chr4_4:79394791-79394810 Msa0706430:intron 25.0%
!! TGTGATTTTCAATTTTACAG+AGG + chr4_4:79395182-79395201 Msa0706430:intron 25.0%
! TATCATCTGCAATAATAACA+GGG - chr4_4:79395379-79395398 None:intergenic 25.0%
! ATATCATCTGCAATAATAAC+AGG - chr4_4:79395380-79395399 None:intergenic 25.0%
! TGTTTCCTTAATATAACTTC+TGG - chr4_4:79395503-79395522 None:intergenic 25.0%
!! ATTTTTATGAACATTTAGGG+AGG - chr4_4:79395773-79395792 None:intergenic 25.0%
! ATGTTCATAAAAATAAGGCT+TGG + chr4_4:79395779-79395798 Msa0706430:intron 25.0%
! CATACTAGATTAGGTAATTT+GGG + chr4_4:79395977-79395996 Msa0706430:intron 25.0%
! GATTCATTAATATGAACACA+TGG - chr4_4:79396117-79396136 None:intergenic 25.0%
!!! ACTTTTGTAATAATGGAAGT+TGG + chr4_4:79396154-79396173 Msa0706430:intron 25.0%
!!! CTTCTAATTCTAGAATTGAT+TGG + chr4_4:79396252-79396271 Msa0706430:intron 25.0%
!! TTCTGATGTGAAAATTTTGT+TGG - chr4_4:79396339-79396358 None:intergenic 25.0%
!!! CATTCAATTTTAGTTAACCA+AGG - chr4_4:79396411-79396430 None:intergenic 25.0%
! CTTGGTTAACTAAAATTGAA+TGG + chr4_4:79396409-79396428 Msa0706430:intron 25.0%
!!! TGATTAGTTTCCAAATCTAT+CGG - chr4_4:79396465-79396484 None:intergenic 25.0%
!!! ATGGATTTTCTTTTTTGAGA+AGG - chr4_4:79396508-79396527 None:intergenic 25.0%
! CAAAGGTTTAAAGAAATGAA+AGG - chr4_4:79396667-79396686 None:intergenic 25.0%
!! CGACTTGTAATTTTTCTTTT+AGG + chr4_4:79396748-79396767 Msa0706430:intron 25.0%
!! AACTATCTATAGTTCAAGTT+CGG - chr4_4:79396934-79396953 None:intergenic 25.0%
! ATAACGATTAAAGGAAATGA+AGG - chr4_4:79397198-79397217 None:intergenic 25.0%
!! AGAGAAAACGTTTTATGTTT+TGG - chr4_4:79397237-79397256 None:intergenic 25.0%
! AGAACCATAATAAGATGATA+TGG + chr4_4:79397307-79397326 Msa0706430:intron 25.0%
! AAAGTAGATTACTAACATCA+TGG - chr4_4:79397480-79397499 None:intergenic 25.0%
! ACTTAAATGTTTACTCCTTT+AGG - chr4_4:79397566-79397585 None:intergenic 25.0%
! TAAATTCACAATAAAAGTGG+AGG + chr4_4:79398221-79398240 Msa0706430:intron 25.0%
!!! AAATTCTGAAATTGTTACGT+TGG - chr4_4:79398276-79398295 None:intergenic 25.0%
!! GATTTTATTGCAAACATGTT+TGG - chr4_4:79398681-79398700 None:intergenic 25.0%
! AGAATACTGAAACTTATAGT+TGG + chr4_4:79398750-79398769 Msa0706430:intron 25.0%
!!! CTTCTTGTTTTATCTAAAGT+TGG - chr4_4:79398846-79398865 None:intergenic 25.0%
! AAAGAAACAGAGTTGAAAAT+TGG - chr4_4:79399209-79399228 None:intergenic 25.0%
! GAACTAAAAAAATGGGTATT+TGG + chr4_4:79399421-79399440 Msa0706430:exon 25.0%
! AAAAATGGGTATTTGGAAAT+TGG + chr4_4:79399428-79399447 Msa0706430:exon 25.0%
! AAAATGGGTATTTGGAAATT+GGG + chr4_4:79399429-79399448 Msa0706430:exon 25.0%
!!! TATTTGGAAATTGGGTTTTT+TGG + chr4_4:79399437-79399456 Msa0706430:CDS 25.0%
!!! ATTTGGAAATTGGGTTTTTT+GGG + chr4_4:79399438-79399457 Msa0706430:CDS 25.0%
! AATTTGATTGCTTCATGTTA+TGG + chr4_4:79399621-79399640 Msa0706430:intron 25.0%
!! AATGCTGTGTCTTTAATTTA+TGG + chr4_4:79399649-79399668 Msa0706430:intron 25.0%
!! CAATACTGTAACTACAATTT+TGG + chr4_4:79399841-79399860 Msa0706430:intron 25.0%
!!! TTGGTAGAACTTTTTTTTGT+TGG + chr4_4:79399860-79399879 Msa0706430:intron 25.0%
! TATTAGTTGGATGAACTTTA+GGG - chr4_4:79399971-79399990 None:intergenic 25.0%
! ATATTAGTTGGATGAACTTT+AGG - chr4_4:79399972-79399991 None:intergenic 25.0%
!!! CATTTATTTTGAGGTAAAGT+GGG - chr4_4:79400213-79400232 None:intergenic 25.0%
!!! ACATTTATTTTGAGGTAAAG+TGG - chr4_4:79400214-79400233 None:intergenic 25.0%
!! AAGTGAATCATATTTTGCAT+AGG + chr4_4:79400249-79400268 Msa0706430:intron 25.0%
! AATATATTTCGAATGCTCAT+TGG - chr4_4:79400481-79400500 None:intergenic 25.0%
! AACCTGAATTAACATAGAAA+AGG + chr4_4:79400542-79400561 Msa0706430:intron 25.0%
!! TTCCTTTTCTATGTTAATTC+AGG - chr4_4:79400547-79400566 None:intergenic 25.0%
! GTTAGATAGAACATCAATAT+AGG - chr4_4:79400720-79400739 None:intergenic 25.0%
!!! AAGAAATGTTTTGTTACAAC+AGG + chr4_4:79401741-79401760 Msa0706430:intron 25.0%
!!! AGAAATGTTTTGTTACAACA+GGG + chr4_4:79401742-79401761 Msa0706430:intron 25.0%
!!! CATTTTAGAATCATACTTTC+AGG - chr4_4:79401894-79401913 None:intergenic 25.0%
! AAAATTGGAGGAAGATTATT+CGG - chr4_4:79401992-79402011 None:intergenic 25.0%
!! TAATTTCTAAGGAATTCCTA+AGG + chr4_4:79402122-79402141 Msa0706430:intron 25.0%
!!! TTCTTGTGTTCTATTTTAGA+AGG + chr4_4:79402213-79402232 Msa0706430:intron 25.0%
!! TTTTTATAGCAAAACAGACT+CGG + chr4_4:79403440-79403459 Msa0706430:intron 25.0%
! TTACAATGTCCACAAAAAAA+GGG - chr4_4:79404122-79404141 None:intergenic 25.0%
! TTTACAATGTCCACAAAAAA+AGG - chr4_4:79404123-79404142 None:intergenic 25.0%
! TTGGAAAATAAGAGTCATAA+TGG + chr4_4:79404278-79404297 Msa0706430:three_prime_UTR 25.0%
!!! ATTTAGATTTTAGCAGGATT+TGG + chr4_4:79404552-79404571 Msa0706430:three_prime_UTR 25.0%
CAAATTTAGTCAACAGAAGA+AGG - chr4_4:79392338-79392357 None:intergenic 30.0%
! TTGAGGTTGATTAGGAATTT+AGG + chr4_4:79392723-79392742 Msa0706430:intron 30.0%
!!! GAGACTCGTTTTTTAAGAAA+AGG + chr4_4:79392961-79392980 Msa0706430:intron 30.0%
GCAACTAATATATAACTGGA+AGG - chr4_4:79393152-79393171 None:intergenic 30.0%
ATGATGAGCTAAAGAAGTAA+TGG - chr4_4:79393229-79393248 None:intergenic 30.0%
TAAGAGACATGTTCTTAGTT+TGG + chr4_4:79393348-79393367 Msa0706430:intron 30.0%
ATACAGGATATGATACGTTT+AGG - chr4_4:79393437-79393456 None:intergenic 30.0%
!!! ATCCTGTATTTTTCAAGGAA+TGG + chr4_4:79393448-79393467 Msa0706430:intron 30.0%
! AACTAGTTTAAGAGTTTGGA+AGG + chr4_4:79393538-79393557 Msa0706430:intron 30.0%
TTTGCTTGGATTATCTTTGA+AGG - chr4_4:79393587-79393606 None:intergenic 30.0%
CAAAGATAATCCAAGCAAAT+TGG + chr4_4:79393588-79393607 Msa0706430:intron 30.0%
ACGACCTATTAATTATCCTA+AGG - chr4_4:79393616-79393635 None:intergenic 30.0%
ATTTAATTCTTGGGCAAAGT+GGG - chr4_4:79393836-79393855 None:intergenic 30.0%
AATTTAATTCTTGGGCAAAG+TGG - chr4_4:79393837-79393856 None:intergenic 30.0%
TTAGAAACAATACACAAGAC+TGG - chr4_4:79393931-79393950 None:intergenic 30.0%
AGAGATTACTAAGCATATTG+TGG + chr4_4:79394066-79394085 Msa0706430:intron 30.0%
ATCATTCGTGGTGATTTAAA+GGG - chr4_4:79394361-79394380 None:intergenic 30.0%
TATATACTAGATCTCGTACT+TGG - chr4_4:79394492-79394511 None:intergenic 30.0%
!! TATTTTGTTTCAGGAAGAGA+AGG + chr4_4:79394607-79394626 Msa0706430:intron 30.0%
! GATTTTATCAGGAATTAGGT+GGG - chr4_4:79394765-79394784 None:intergenic 30.0%
AGTATACAAAAATAGACCTG+GGG - chr4_4:79394787-79394806 None:intergenic 30.0%
ATAATCCTGACTATTCAAAC+TGG + chr4_4:79395158-79395177 Msa0706430:intron 30.0%
TCAGTAGAAATGTCAAATAG+TGG - chr4_4:79395245-79395264 None:intergenic 30.0%
TGTCCTCATAATATGTTGTT+GGG - chr4_4:79395271-79395290 None:intergenic 30.0%
ATGTCCTCATAATATGTTGT+TGG - chr4_4:79395272-79395291 None:intergenic 30.0%
TCCTTAATATAACTTCTGGT+CGG - chr4_4:79395499-79395518 None:intergenic 30.0%
! ACAGTTGTAGTAGTTTTCTT+AGG + chr4_4:79395715-79395734 Msa0706430:intron 30.0%
! CAGGATAATTTTACATGTCT+TGG + chr4_4:79395742-79395761 Msa0706430:intron 30.0%
GCATACTAGATTAGGTAATT+TGG + chr4_4:79395976-79395995 Msa0706430:intron 30.0%
! TGGATAATCAAAGTATTCTC+AGG + chr4_4:79396009-79396028 Msa0706430:intron 30.0%
! ATAATCAAAGTATTCTCAGG+TGG + chr4_4:79396012-79396031 Msa0706430:intron 30.0%
!!! CAATTTTAGTTAACCAAGGT+TGG - chr4_4:79396407-79396426 None:intergenic 30.0%
!!! CTTTTTTGAGAAGGCAATTA+TGG - chr4_4:79396499-79396518 None:intergenic 30.0%
!!! ACTATGTCACTTGTTTTTGA+AGG + chr4_4:79396704-79396723 Msa0706430:intron 30.0%
! TATAGATAGTTCGATTCGTT+TGG + chr4_4:79396943-79396962 Msa0706430:intron 30.0%
TAAAGGAAATGAAGGTTGTT+AGG - chr4_4:79397190-79397209 None:intergenic 30.0%
GAAAATGGGATAACGATTAA+AGG - chr4_4:79397207-79397226 None:intergenic 30.0%
!! GTTTTGGTGGAATTGAAAAT+GGG - chr4_4:79397221-79397240 None:intergenic 30.0%
!!! TGTTTTGGTGGAATTGAAAA+TGG - chr4_4:79397222-79397241 None:intergenic 30.0%
!! GAAAACGTTTTATGTTTTGG+TGG - chr4_4:79397234-79397253 None:intergenic 30.0%
TTATGGTTCTCATTACCAAA+GGG - chr4_4:79397297-79397316 None:intergenic 30.0%
ATTATGGTTCTCATTACCAA+AGG - chr4_4:79397298-79397317 None:intergenic 30.0%
ACTCCTATACAAACAACTAA+GGG - chr4_4:79397334-79397353 None:intergenic 30.0%
AACTCCTATACAAACAACTA+AGG - chr4_4:79397335-79397354 None:intergenic 30.0%
! TAGTTTGCCCTCTTTATTAT+TGG + chr4_4:79397392-79397411 Msa0706430:intron 30.0%
GCCTATTCCAATAATAAAGA+GGG - chr4_4:79397402-79397421 None:intergenic 30.0%
AGCCTATTCCAATAATAAAG+AGG - chr4_4:79397403-79397422 None:intergenic 30.0%
AAATTGTTTATTGGTGCATG+TGG + chr4_4:79397448-79397467 Msa0706430:intron 30.0%
!! TTTTTGAATTGTTGCTGCTT+TGG + chr4_4:79397510-79397529 Msa0706430:intron 30.0%
!! GGAGTAAACATTTAAGTTGA+AGG + chr4_4:79397569-79397588 Msa0706430:intron 30.0%
!! CATTTAAGTTGAAGGCTATA+TGG + chr4_4:79397577-79397596 Msa0706430:intron 30.0%
! ACTGATACTATTTCTCTTGA+AGG + chr4_4:79397617-79397636 Msa0706430:intron 30.0%
! CTGATACTATTTCTCTTGAA+GGG + chr4_4:79397618-79397637 Msa0706430:intron 30.0%
! TGATACTATTTCTCTTGAAG+GGG + chr4_4:79397619-79397638 Msa0706430:intron 30.0%
CTGATATAAGTAACAAAGGA+AGG - chr4_4:79397725-79397744 None:intergenic 30.0%
ATACAAAGGATAGACTTGAA+TGG - chr4_4:79397798-79397817 None:intergenic 30.0%
ATTCAAGTCTATCCTTTGTA+TGG + chr4_4:79397797-79397816 Msa0706430:intron 30.0%
AAATATAATACTGATAGGGC+TGG - chr4_4:79398076-79398095 None:intergenic 30.0%
!!! AGAATTTTGTCGATTCAACT+AGG + chr4_4:79398289-79398308 Msa0706430:intron 30.0%
! AATGTAAAACTGGATTTTGC+TGG - chr4_4:79399156-79399175 None:intergenic 30.0%
TCAAATTTGGTCAAAGAAGA+AGG - chr4_4:79399334-79399353 None:intergenic 30.0%
TTCTTGGGGAACTAAAAAAA+TGG + chr4_4:79399413-79399432 Msa0706430:exon 30.0%
TCTTGGGGAACTAAAAAAAT+GGG + chr4_4:79399414-79399433 Msa0706430:exon 30.0%
!!! TTTGGAAATTGGGTTTTTTG+GGG + chr4_4:79399439-79399458 Msa0706430:CDS 30.0%
TAAAGAGAAAAGCAACACAA+AGG - chr4_4:79399467-79399486 None:intergenic 30.0%
! AGTTACAGTATTGAACTAGA+AGG - chr4_4:79399834-79399853 None:intergenic 30.0%
!! ACAAACCTTTAAGACTTTCA+AGG + chr4_4:79400177-79400196 Msa0706430:intron 30.0%
TTTCACCTTGAAAGTCTTAA+AGG - chr4_4:79400185-79400204 None:intergenic 30.0%
TTTGCTTGCATTGTCTTTAA+AGG - chr4_4:79400419-79400438 None:intergenic 30.0%
AACAAGAAAGATAGCTATGA+GGG + chr4_4:79401266-79401285 Msa0706430:intron 30.0%
! TATTTTGCTACCTATACTAC+AGG - chr4_4:79401315-79401334 None:intergenic 30.0%
! TTGCAAAGTATCAAACAGAA+GGG + chr4_4:79401539-79401558 Msa0706430:intron 30.0%
! ACAAGTACTTTTCTAACTCT+CGG + chr4_4:79401597-79401616 Msa0706430:intron 30.0%
ACTGGAAGAATTGTTAATTC+TGG - chr4_4:79401719-79401738 None:intergenic 30.0%
GGATATATATATGTTCAGCT+TGG - chr4_4:79401817-79401836 None:intergenic 30.0%
AACAATTAATGGCGTAAAGT+TGG - chr4_4:79401919-79401938 None:intergenic 30.0%
ATCCTGTAATTGCAGAAAAT+TGG - chr4_4:79402007-79402026 None:intergenic 30.0%
AATAATATATCCTTCCGCAA+GGG - chr4_4:79402060-79402079 None:intergenic 30.0%
TAATAATATATCCTTCCGCA+AGG - chr4_4:79402061-79402080 None:intergenic 30.0%
ATTAGTAATCTTGTGTCTGT+AGG + chr4_4:79402077-79402096 Msa0706430:intron 30.0%
TATGTACCAAACATATCCTT+AGG - chr4_4:79402141-79402160 None:intergenic 30.0%
ATAATAAATGTGCACATCCT+TGG + chr4_4:79402160-79402179 Msa0706430:intron 30.0%
!!! TGGAATTTTGAGGTGTTTAT+AGG + chr4_4:79402188-79402207 Msa0706430:intron 30.0%
GCATTAAGAAATTCTGTTTC+TGG + chr4_4:79402240-79402259 Msa0706430:intron 30.0%
TTTGTGGTTGAACTAATTGT+AGG + chr4_4:79402356-79402375 Msa0706430:intron 30.0%
!! TTTCTTCAAATTGGCCTTAT+TGG + chr4_4:79402675-79402694 Msa0706430:CDS 30.0%
ACATATTCTAGACTCATACT+TGG - chr4_4:79402766-79402785 None:intergenic 30.0%
!! TATTTTGTTTCAGGAAGAGA+AGG + chr4_4:79394607-79394626 Msa0706430:intron 30.0%
AAGTACACAAAAATTGACCT+GGG - chr4_4:79403059-79403078 None:intergenic 30.0%
! AAATACCCTCATTTGAAGTT+TGG - chr4_4:79403154-79403173 None:intergenic 30.0%
TATTGTATGCATAAGAATGC+TGG + chr4_4:79403203-79403222 Msa0706430:intron 30.0%
GATGAACAAATAATCCTAAC+TGG + chr4_4:79403462-79403481 Msa0706430:intron 30.0%
ATATCATCGGCAATAATAAC+AGG - chr4_4:79403694-79403713 None:intergenic 30.0%
AAACGGTAGAACAATATCAT+CGG - chr4_4:79403707-79403726 None:intergenic 30.0%
TGTTTCCTTAGTATAACTTC+TGG - chr4_4:79403817-79403836 None:intergenic 30.0%
AGATCAATCATGTAGCAAAT+TGG - chr4_4:79404190-79404209 None:intergenic 30.0%
TTTCTTGTTCTGATGATAGT+TGG + chr4_4:79404315-79404334 Msa0706430:three_prime_UTR 30.0%
!!! CATATCATAGCTTGTTGTTT+TGG + chr4_4:79404403-79404422 Msa0706430:three_prime_UTR 30.0%
!!! TTGTTTTGGTAAACTTAGAG+TGG + chr4_4:79404417-79404436 Msa0706430:three_prime_UTR 30.0%
GCTAAAATCTAAATACTGGA+AGG - chr4_4:79404546-79404565 None:intergenic 30.0%
!! TCCAGTATTTAGATTTTAGC+AGG + chr4_4:79404546-79404565 Msa0706430:three_prime_UTR 30.0%
TCCTGCTAAAATCTAAATAC+TGG - chr4_4:79404550-79404569 None:intergenic 30.0%
!!! TCAGTGTTTTTTCTTTGACA+AGG + chr4_4:79404596-79404615 Msa0706430:three_prime_UTR 30.0%
TCTCATGAAAGATATTAGTC+TGG + chr4_4:79404677-79404696 Msa0706430:three_prime_UTR 30.0%
!! GTAATTCTAGTTTATTCTCC+AGG + chr4_4:79404706-79404725 Msa0706430:three_prime_UTR 30.0%
!!! TGAATTTTGCTGGTTTAGAG+GGG - chr4_4:79392107-79392126 None:intergenic 35.0%
!!! GTGAATTTTGCTGGTTTAGA+GGG - chr4_4:79392108-79392127 None:intergenic 35.0%
AAGAAGATGAAGATTGACGA+AGG - chr4_4:79392130-79392149 None:intergenic 35.0%
AAGTTGAAAATGGAAGAGTG+TGG - chr4_4:79392159-79392178 None:intergenic 35.0%
TTTCAATGGAATTAGCTGGA+AGG - chr4_4:79392260-79392279 None:intergenic 35.0%
TCTTAGAAATGGGGTTTCAA+TGG - chr4_4:79392274-79392293 None:intergenic 35.0%
TGGGAGATTTCTTAGAAATG+GGG - chr4_4:79392283-79392302 None:intergenic 35.0%
GTGGGAGATTTCTTAGAAAT+GGG - chr4_4:79392284-79392303 None:intergenic 35.0%
TGTGGGAGATTTCTTAGAAA+TGG - chr4_4:79392285-79392304 None:intergenic 35.0%
TAGTCAACAGAAGAAGGTTA+AGG - chr4_4:79392332-79392351 None:intergenic 35.0%
TCACCTGAAATTCTTTCAGT+AGG - chr4_4:79392512-79392531 None:intergenic 35.0%
! TGTGATCAATTTTTGTCACG+TGG + chr4_4:79392625-79392644 Msa0706430:intron 35.0%
! GTGATCAATTTTTGTCACGT+GGG + chr4_4:79392626-79392645 Msa0706430:intron 35.0%
ATTATGAATGTGATCTGCTC+TGG + chr4_4:79392699-79392718 Msa0706430:intron 35.0%
TCAAACTAGCAGGATTGAAT+TGG - chr4_4:79392779-79392798 None:intergenic 35.0%
CATACTAGTATCAAACTAGC+AGG - chr4_4:79392789-79392808 None:intergenic 35.0%
GTGTTCCTTAGATTCAATGT+CGG + chr4_4:79392840-79392859 Msa0706430:intron 35.0%
AATTGCCGACATTGAATCTA+AGG - chr4_4:79392848-79392867 None:intergenic 35.0%
ATTCAATGTCGGCAATTATG+AGG + chr4_4:79392851-79392870 Msa0706430:intron 35.0%
! AGCATAATGCAGAGTATCAA+GGG - chr4_4:79392906-79392925 None:intergenic 35.0%
ATGAGATGTGAAGTCATAAG+AGG - chr4_4:79393024-79393043 None:intergenic 35.0%
CTGGAAGGACCTAAATAAAA+TGG - chr4_4:79393137-79393156 None:intergenic 35.0%
CACCATTCCTTGAAAAATAC+AGG - chr4_4:79393453-79393472 None:intergenic 35.0%
! TGGCAACTAGTTTAAGAGTT+TGG + chr4_4:79393534-79393553 Msa0706430:intron 35.0%
! TGGAAGGTGTATAACTTCAT+AGG + chr4_4:79393554-79393573 Msa0706430:intron 35.0%
AAGGTGTATAACTTCATAGG+CGG + chr4_4:79393557-79393576 Msa0706430:intron 35.0%
GGGACCTTAGGATAATTAAT+AGG + chr4_4:79393609-79393628 Msa0706430:intron 35.0%
TTTAATTCTTGGGCAAAGTG+GGG - chr4_4:79393835-79393854 None:intergenic 35.0%
TACAAACGACTTAAAACTCC+AGG - chr4_4:79393906-79393925 None:intergenic 35.0%
ATTGTGGTTGAACCAATTGT+AGG + chr4_4:79394082-79394101 Msa0706430:intron 35.0%
GTGGTGATTTAAAGGGTAAA+GGG - chr4_4:79394354-79394373 None:intergenic 35.0%
CATCATTCGTGGTGATTTAA+AGG - chr4_4:79394362-79394381 None:intergenic 35.0%
TTAAATCACCACGAATGATG+AGG + chr4_4:79394362-79394381 Msa0706430:intron 35.0%
GGCATTAATAGTTGAATCAG+AGG - chr4_4:79394563-79394582 None:intergenic 35.0%
AAGAGAAGGCAATTGAAAGA+GGG + chr4_4:79394621-79394640 Msa0706430:intron 35.0%
AAATCATGTGTGCTTGAAAG+AGG + chr4_4:79394694-79394713 Msa0706430:intron 35.0%
AATCATGTGTGCTTGAAAGA+GGG + chr4_4:79394695-79394714 Msa0706430:intron 35.0%
! GGATTTTATCAGGAATTAGG+TGG - chr4_4:79394766-79394785 None:intergenic 35.0%
! TGGGGATTTTATCAGGAATT+AGG - chr4_4:79394769-79394788 None:intergenic 35.0%
TAATTCCTGATAAAATCCCC+AGG + chr4_4:79394768-79394787 Msa0706430:intron 35.0%
ACAAGCTCAAACTTCAAATG+AGG + chr4_4:79394874-79394893 Msa0706430:intron 35.0%
TTATGTGTGCATAAGAAAGC+CGG + chr4_4:79394929-79394948 Msa0706430:intron 35.0%
TCTGATGCATGCATGAATTT+CGG + chr4_4:79395106-79395125 Msa0706430:intron 35.0%
CAATACCATGGGAAGATATT+GGG + chr4_4:79395420-79395439 Msa0706430:intron 35.0%
AATACCATGGGAAGATATTG+GGG + chr4_4:79395421-79395440 Msa0706430:intron 35.0%
TCCGACCAGAAGTTATATTA+AGG + chr4_4:79395495-79395514 Msa0706430:intron 35.0%
GAATAGCATTGCTTGTTTCA+TGG - chr4_4:79395546-79395565 None:intergenic 35.0%
!! GCTTTCCATCAAGTTCTAAA+TGG + chr4_4:79395590-79395609 Msa0706430:intron 35.0%
! CAAGTCCATTTAGAACTTGA+TGG - chr4_4:79395598-79395617 None:intergenic 35.0%
!! AAGTTCTAAATGGACTTGCA+CGG + chr4_4:79395600-79395619 Msa0706430:intron 35.0%
ACAACTGTTACCAAGGTTTA+AGG - chr4_4:79395703-79395722 None:intergenic 35.0%
AACTACTACAACTGTTACCA+AGG - chr4_4:79395710-79395729 None:intergenic 35.0%
! AGTAGTTTTCTTAGGTGATC+AGG + chr4_4:79395723-79395742 Msa0706430:intron 35.0%
TTTGTGCTGCATACTAGATT+AGG + chr4_4:79395968-79395987 Msa0706430:intron 35.0%
AGATTAGGTAATTTGGGTCA+CGG + chr4_4:79395983-79396002 Msa0706430:intron 35.0%
ATTTCAAGATTAGAATGGGC+AGG + chr4_4:79396044-79396063 Msa0706430:intron 35.0%
GTGAACTATGAAGTTCTCTT+TGG + chr4_4:79396066-79396085 Msa0706430:intron 35.0%
AGAATTGATTGGATTCCAAG+TGG + chr4_4:79396263-79396282 Msa0706430:intron 35.0%
! GCATTTAGTTCAAGAACCAA+TGG - chr4_4:79396292-79396311 None:intergenic 35.0%
CGATTTACATTCAAGAACGT+GGG - chr4_4:79396368-79396387 None:intergenic 35.0%
TCGATTTACATTCAAGAACG+TGG - chr4_4:79396369-79396388 None:intergenic 35.0%
TCTTACAACTAAACCAACCT+TGG + chr4_4:79396391-79396410 Msa0706430:intron 35.0%
TTCTGTGATACCGATAGATT+TGG + chr4_4:79396452-79396471 Msa0706430:intron 35.0%
CTTTCTCTCTTGTATGATCA+TGG - chr4_4:79396527-79396546 None:intergenic 35.0%
! TAATTGTCAGTATTTAGGGC+TGG + chr4_4:79396786-79396805 Msa0706430:intron 35.0%
ATTTCGAACTACATTCGAGT+TGG - chr4_4:79396824-79396843 None:intergenic 35.0%
! CTTAATTTTCAGCTCAGGTT+CGG - chr4_4:79396894-79396913 None:intergenic 35.0%
! ACGAACTTAATTTTCAGCTC+AGG - chr4_4:79396899-79396918 None:intergenic 35.0%
TGGGTAAAAAAAGGGAGAAA+CGG - chr4_4:79397122-79397141 None:intergenic 35.0%
TTCCTAGATAGACAATGGAA+CGG - chr4_4:79397146-79397165 None:intergenic 35.0%
CCTATTTCCTAGATAGACAA+TGG - chr4_4:79397151-79397170 None:intergenic 35.0%
CCATTGTCTATCTAGGAAAT+AGG + chr4_4:79397148-79397167 Msa0706430:intron 35.0%
TTCGCATATGAATTTGCCTA+TGG - chr4_4:79397273-79397292 None:intergenic 35.0%
GGGACCATATCATCTTATTA+TGG - chr4_4:79397314-79397333 None:intergenic 35.0%
AGTTGAAGATGCACAATTGA+TGG - chr4_4:79397359-79397378 None:intergenic 35.0%
GCCCTCTTTATTATTGGAAT+AGG + chr4_4:79397398-79397417 Msa0706430:intron 35.0%
AACAAGCTTCACAAATGATG+TGG - chr4_4:79397539-79397558 None:intergenic 35.0%
TGAAGGCTATATGGAAAATG+TGG + chr4_4:79397586-79397605 Msa0706430:intron 35.0%
AAGAGTGAAGAAGAAGATGA+AGG - chr4_4:79399186-79399205 None:intergenic 35.0%
GTGACAGATTTCTTAGGAAT+GGG - chr4_4:79399285-79399304 None:intergenic 35.0%
TGTGACAGATTTCTTAGGAA+TGG - chr4_4:79399286-79399305 None:intergenic 35.0%
GTAGTTGTGACAGATTTCTT+AGG - chr4_4:79399291-79399310 None:intergenic 35.0%
GCTGCAAAAGAAGTAGTAAA+GGG - chr4_4:79399372-79399391 None:intergenic 35.0%
TGCTGCAAAAGAAGTAGTAA+AGG - chr4_4:79399373-79399392 None:intergenic 35.0%
CAACCTACTGAAAGAATTTC+AGG + chr4_4:79399516-79399535 Msa0706430:CDS 35.0%
CTACCTGAAATTCTTTCAGT+AGG - chr4_4:79399522-79399541 None:intergenic 35.0%
! TTTATGGTTAGGTGTCATGT+AGG + chr4_4:79399594-79399613 Msa0706430:intron 35.0%
!! TTAGGATCTGCTTTTGATTG+AGG + chr4_4:79399691-79399710 Msa0706430:intron 35.0%
ACGACAACATTAAAAGATGC+CGG - chr4_4:79400063-79400082 None:intergenic 35.0%
!! GAATTACGAAAAGTGTTAGC+AGG + chr4_4:79400290-79400309 Msa0706430:intron 35.0%
CTTAAATGAGTTGCTGACAT+TGG - chr4_4:79400362-79400381 None:intergenic 35.0%
TGAACCTTGCGGTTATAAAT+AGG + chr4_4:79400441-79400460 Msa0706430:intron 35.0%
GAACCTTGCGGTTATAAATA+GGG + chr4_4:79400442-79400461 Msa0706430:intron 35.0%
GCATTTGCTCTGATTTACAA+GGG - chr4_4:79400613-79400632 None:intergenic 35.0%
AGCATTTGCTCTGATTTACA+AGG - chr4_4:79400614-79400633 None:intergenic 35.0%
ACATCAATATAGGGTGGAAA+AGG - chr4_4:79400710-79400729 None:intergenic 35.0%
GATAGAACATCAATATAGGG+TGG - chr4_4:79400716-79400735 None:intergenic 35.0%
TAGACCTAAGCTCTACAAAT+GGG - chr4_4:79400755-79400774 None:intergenic 35.0%
CTGGATCAAAGTTTACATTC+AGG - chr4_4:79400965-79400984 None:intergenic 35.0%
AATGTAAACTTTGATCCAGC+TGG + chr4_4:79400966-79400985 Msa0706430:intron 35.0%
! TTGGTCTTTGGTATGCTTTA+TGG - chr4_4:79401083-79401102 None:intergenic 35.0%
ATACCAAAGACCAAGTACAT+AGG + chr4_4:79401089-79401108 Msa0706430:intron 35.0%
TACCAAAGACCAAGTACATA+GGG + chr4_4:79401090-79401109 Msa0706430:intron 35.0%
CATTATACTCCCTATGTACT+TGG - chr4_4:79401102-79401121 None:intergenic 35.0%
TCTAGGAAAGGACAAATCTT+TGG - chr4_4:79401153-79401172 None:intergenic 35.0%
TGCTCCCATTAATTCAGAAA+TGG - chr4_4:79401226-79401245 None:intergenic 35.0%
CAACAAGAAAGATAGCTATG+AGG + chr4_4:79401265-79401284 Msa0706430:intron 35.0%
CAACACAAAACCTGTAGTAT+AGG + chr4_4:79401302-79401321 Msa0706430:intron 35.0%
TCCCCACAATTACTGAAATT+TGG + chr4_4:79401345-79401364 Msa0706430:intron 35.0%
CCCAAATTTCAGTAATTGTG+GGG - chr4_4:79401349-79401368 None:intergenic 35.0%
CCCCACAATTACTGAAATTT+GGG + chr4_4:79401346-79401365 Msa0706430:intron 35.0%
GCCCAAATTTCAGTAATTGT+GGG - chr4_4:79401350-79401369 None:intergenic 35.0%
AGCCCAAATTTCAGTAATTG+TGG - chr4_4:79401351-79401370 None:intergenic 35.0%
TGAGCGTTAGGATTATTGTA+AGG - chr4_4:79401412-79401431 None:intergenic 35.0%
ATGGCATGCTTTAATCAAAG+CGG - chr4_4:79401441-79401460 None:intergenic 35.0%
AGCAGTGCTAAAAAATGAGA+TGG - chr4_4:79401460-79401479 None:intergenic 35.0%
CGAATCTAACAAAATGTGTG+AGG - chr4_4:79401497-79401516 None:intergenic 35.0%
! GTTGCAAAGTATCAAACAGA+AGG + chr4_4:79401538-79401557 Msa0706430:intron 35.0%
! TGCAAAGTATCAAACAGAAG+GGG + chr4_4:79401540-79401559 Msa0706430:intron 35.0%
!! TGTTTTGTTACAACAGGGAT+TGG + chr4_4:79401747-79401766 Msa0706430:intron 35.0%
ACAAAGGCAAGGAAGTTATT+AGG - chr4_4:79401786-79401805 None:intergenic 35.0%
!! CTCTGAAATGGTTAACAGAA+TGG + chr4_4:79401957-79401976 Msa0706430:intron 35.0%
CTGTAATTGCAGAAAATTGG+AGG - chr4_4:79402004-79402023 None:intergenic 35.0%
! CTCCAATTTTCTGCAATTAC+AGG + chr4_4:79402002-79402021 Msa0706430:intron 35.0%
!!! GCTCGGTAGTTTTAATAGAT+TGG + chr4_4:79402099-79402118 Msa0706430:intron 35.0%
GGAATTCCTAAGGATATGTT+TGG + chr4_4:79402132-79402151 Msa0706430:intron 35.0%
TGATGTATTGGAAGATGATC+CGG + chr4_4:79402388-79402407 Msa0706430:CDS 35.0%
ATCAGCTTCTTCAGGATTAA+GGG - chr4_4:79402555-79402574 None:intergenic 35.0%
AATCAGCTTCTTCAGGATTA+AGG - chr4_4:79402556-79402575 None:intergenic 35.0%
TTAATCCTGAAGAAGCTGAT+TGG + chr4_4:79402555-79402574 Msa0706430:CDS 35.0%
TAAAACCAATCAGCTTCTTC+AGG - chr4_4:79402563-79402582 None:intergenic 35.0%
AGGAACCACAAAGAAATGAT+CGG - chr4_4:79402717-79402736 None:intergenic 35.0%
TCTAGACTCATACTTGGTAA+TGG - chr4_4:79402760-79402779 None:intergenic 35.0%
ATATGGTTTATGTGCAGCAT+TGG - chr4_4:79402837-79402856 None:intergenic 35.0%
AAGAGAAGGCAATTGAAAGA+GGG + chr4_4:79394621-79394640 Msa0706430:intron 35.0%
CTACCTTGGTTCAAACATTT+GGG + chr4_4:79394666-79394685 Msa0706430:intron 35.0%
AATCATGTGTGCTTGAAAGA+TGG + chr4_4:79394695-79394714 Msa0706430:intron 35.0%
AGTACACAAAAATTGACCTG+GGG - chr4_4:79403058-79403077 None:intergenic 35.0%
GAAGTACACAAAAATTGACC+TGG - chr4_4:79403060-79403079 None:intergenic 35.0%
! TCAATTTTTGTGTACTTCCG+AGG + chr4_4:79403062-79403081 Msa0706430:CDS 35.0%
CAACATCATAAAACAGTCCT+CGG - chr4_4:79394811-79394830 None:intergenic 35.0%
TTGCATAATAACCACCTTCA+GGG - chr4_4:79403112-79403131 None:intergenic 35.0%
! TGCAAGGTAGGTCTTTTTAT+CGG + chr4_4:79403127-79403146 Msa0706430:intron 35.0%
! GTGATTTGGAACTTTAACAG+AGG + chr4_4:79403496-79403515 Msa0706430:intron 35.0%
TCCACTATTTGACATTTCGA+CGG + chr4_4:79403555-79403574 Msa0706430:CDS 35.0%
ATGTCCTCGTAATATGTTGT+TGG - chr4_4:79403586-79403605 None:intergenic 35.0%
TCCTTAGTATAACTTCTGGT+GGG - chr4_4:79403813-79403832 None:intergenic 35.0%
TTCCTTAGTATAACTTCTGG+TGG - chr4_4:79403814-79403833 None:intergenic 35.0%
ACATTGCTTGCTTCATAGAA+GGG - chr4_4:79403855-79403874 None:intergenic 35.0%
AACATTGCTTGCTTCATAGA+AGG - chr4_4:79403856-79403875 None:intergenic 35.0%
! TCCATTTAGAACTTGATGGA+AGG - chr4_4:79395594-79395613 None:intergenic 35.0%
! CAAGTCCATTTAGAACTTGA+TGG - chr4_4:79395598-79395617 None:intergenic 35.0%
!! AAGTTCTAAATGGACTTGCA+CGG + chr4_4:79395600-79395619 Msa0706430:intron 35.0%
! AGGAGTGTATTCTTGAAACA+AGG + chr4_4:79403952-79403971 Msa0706430:CDS 35.0%
GGAGTGTATTCTTGAAACAA+GGG + chr4_4:79403953-79403972 Msa0706430:CDS 35.0%
GAGTGTATTCTTGAAACAAG+GGG + chr4_4:79403954-79403973 Msa0706430:CDS 35.0%
AAAACTGCTACCAAGGTTTA+AGG - chr4_4:79404017-79404036 None:intergenic 35.0%
TAAAGAATCATAATCGCCTC+AGG - chr4_4:79404046-79404065 None:intergenic 35.0%
!!! ACTTATTTTGCTGCCTTAGT+AGG + chr4_4:79404227-79404246 Msa0706430:three_prime_UTR 35.0%
GATATGCTTGAAGTCTCAAT+TGG - chr4_4:79404389-79404408 None:intergenic 35.0%
! ATATTTTGTGTCTGTGTGTG+TGG + chr4_4:79404463-79404482 Msa0706430:three_prime_UTR 35.0%
!! TTAGGAAGAAGTGTCAAATC+TGG + chr4_4:79404498-79404517 Msa0706430:three_prime_UTR 35.0%
TTGGATTCAAGCTTGTCTTT+AGG + chr4_4:79404571-79404590 Msa0706430:three_prime_UTR 35.0%
!! TTCTAGTTTATTCTCCAGGT+AGG + chr4_4:79404710-79404729 Msa0706430:three_prime_UTR 35.0%
! TCTAGTTTATTCTCCAGGTA+GGG + chr4_4:79404711-79404730 Msa0706430:three_prime_UTR 35.0%
!! AGGGGTATTGTAATTGTGTG+GGG - chr4_4:79392089-79392108 None:intergenic 40.0%
!! GAGGGGTATTGTAATTGTGT+GGG - chr4_4:79392090-79392109 None:intergenic 40.0%
!! AGAGGGGTATTGTAATTGTG+TGG - chr4_4:79392091-79392110 None:intergenic 40.0%
!!! GGTGAATTTTGCTGGTTTAG+AGG - chr4_4:79392109-79392128 None:intergenic 40.0%
! TTGACGAAGGTGAATTTTGC+TGG - chr4_4:79392117-79392136 None:intergenic 40.0%
GAGAGTAGCGAAGTTGAAAA+TGG - chr4_4:79392169-79392188 None:intergenic 40.0%
TGGAATTAGCTGGAAGGAAA+GGG - chr4_4:79392254-79392273 None:intergenic 40.0%
ATGGAATTAGCTGGAAGGAA+AGG - chr4_4:79392255-79392274 None:intergenic 40.0%
AGGGAAAGTAGTTGTGTTGT+GGG - chr4_4:79392302-79392321 None:intergenic 40.0%
AAGGGAAAGTAGTTGTGTTG+TGG - chr4_4:79392303-79392322 None:intergenic 40.0%
!! AGAAGGTTAAGGTGTCGTAA+GGG - chr4_4:79392321-79392340 None:intergenic 40.0%
!! AAGAAGGTTAAGGTGTCGTA+AGG - chr4_4:79392322-79392341 None:intergenic 40.0%
TCTCTCTTCAATTGATGCTG+TGG + chr4_4:79392469-79392488 Msa0706430:intron 40.0%
CAGCCTACTGAAAGAATTTC+AGG + chr4_4:79392506-79392525 Msa0706430:intron 40.0%
AGTATCAAGGGAAACACATG+AGG - chr4_4:79392894-79392913 None:intergenic 40.0%
! GAGCATAATGCAGAGTATCA+AGG - chr4_4:79392907-79392926 None:intergenic 40.0%
GATGCATATTGACAGCCTAA+CGG - chr4_4:79392929-79392948 None:intergenic 40.0%
AAAAAATCCCAACACGCTGT+CGG + chr4_4:79392984-79393003 Msa0706430:intron 40.0%
CGTGTCTGTACTTCAAATGT+TGG + chr4_4:79393507-79393526 Msa0706430:intron 40.0%
GTACTTCAAATGTTGGCAAG+TGG + chr4_4:79393514-79393533 Msa0706430:intron 40.0%
! TTACGTAAGAGGTACACCAT+TGG - chr4_4:79393685-79393704 None:intergenic 40.0%
TTAATTCTTGGGCAAAGTGG+GGG - chr4_4:79393834-79393853 None:intergenic 40.0%
! ATACAACAAAAGCACATCCC+CGG + chr4_4:79393877-79393896 Msa0706430:intron 40.0%
CGATGTATTGGAAGATGATC+CGG + chr4_4:79394114-79394133 Msa0706430:intron 40.0%
AAAACCTTCAACCTTCCAAC+CGG - chr4_4:79394136-79394155 None:intergenic 40.0%
GATCTCAGCAGCAAACATAT+GGG - chr4_4:79394221-79394240 None:intergenic 40.0%
AGATCTCAGCAGCAAACATA+TGG - chr4_4:79394222-79394241 None:intergenic 40.0%
CTGCTGAGATCTTTATGCAT+CGG + chr4_4:79394230-79394249 Msa0706430:intron 40.0%
AAAACCAATCAGCCTCTTCA+GGG - chr4_4:79394288-79394307 None:intergenic 40.0%
TAAAACCAATCAGCCTCTTC+AGG - chr4_4:79394289-79394308 None:intergenic 40.0%
GTGATTTAAAGGGTAAAGGG+AGG - chr4_4:79394351-79394370 None:intergenic 40.0%
CGTGGTGATTTAAAGGGTAA+AGG - chr4_4:79394355-79394374 None:intergenic 40.0%
TTTCTTCAAACTGGCCCTAT+TGG + chr4_4:79394401-79394420 Msa0706430:intron 40.0%
CATGAGGAACCACAAAGAAA+TGG - chr4_4:79394447-79394466 None:intergenic 40.0%
TTTGTGGTTCCTCATGACTT+TGG + chr4_4:79394451-79394470 Msa0706430:intron 40.0%
TTGTGGTTCCTCATGACTTT+GGG + chr4_4:79394452-79394471 Msa0706430:intron 40.0%
TCAACTATTAATGCCTCACG+TGG + chr4_4:79394568-79394587 Msa0706430:intron 40.0%
CAACTATTAATGCCTCACGT+GGG + chr4_4:79394569-79394588 Msa0706430:intron 40.0%
GAAGAGAAGGCAATTGAAAG+AGG + chr4_4:79394620-79394639 Msa0706430:intron 40.0%
GCTACCTTGGTTCAAACATT+TGG + chr4_4:79394665-79394684 Msa0706430:intron 40.0%
CTGACCAAATGTTTGAACCA+AGG - chr4_4:79394672-79394691 None:intergenic 40.0%
!! ATTTTCTGTGGTGGAGCATA+TGG - chr4_4:79394737-79394756 None:intergenic 40.0%
! ATAGACCTGGGGATTTTATC+AGG - chr4_4:79394776-79394795 None:intergenic 40.0%
! CGAGGACTGTTTTATGATGT+TGG + chr4_4:79394809-79394828 Msa0706430:intron 40.0%
TTGCATAGTATCCACCTTCA+GGG - chr4_4:79394841-79394860 None:intergenic 40.0%
ACTTCAAATGAGGCTTGAGT+AGG + chr4_4:79394884-79394903 Msa0706430:intron 40.0%
! CTCATCCTTCTACTCTGAAA+AGG + chr4_4:79394952-79394971 Msa0706430:intron 40.0%
AGCAGTATGGGAGAACTTTA+AGG + chr4_4:79395214-79395233 Msa0706430:intron 40.0%
GCACCCAACAACATATTATG+AGG + chr4_4:79395265-79395284 Msa0706430:intron 40.0%
TTGGTTGAAGCTGTGGTATT+TGG + chr4_4:79395347-79395366 Msa0706430:intron 40.0%
GCAATACCATGGGAAGATAT+TGG + chr4_4:79395419-79395438 Msa0706430:intron 40.0%
GTGAGTATGGTATCCAACTT+GGG - chr4_4:79395470-79395489 None:intergenic 40.0%
TGTGAGTATGGTATCCAACT+TGG - chr4_4:79395471-79395490 None:intergenic 40.0%
GCATTGCTTGTTTCATGGAA+GGG - chr4_4:79395541-79395560 None:intergenic 40.0%
AGCATTGCTTGTTTCATGGA+AGG - chr4_4:79395542-79395561 None:intergenic 40.0%
AAGAATACACTCCTGTCATG+CGG - chr4_4:79395632-79395651 None:intergenic 40.0%
! AGGAGTGTATTCTTGAAACC+AGG + chr4_4:79395638-79395657 Msa0706430:intron 40.0%
GGAGTGTATTCTTGAAACCA+GGG + chr4_4:79395639-79395658 Msa0706430:intron 40.0%
GAGTGTATTCTTGAAACCAG+GGG + chr4_4:79395640-79395659 Msa0706430:intron 40.0%
AAAAGCTTGAATTGGACTGC+TGG + chr4_4:79395665-79395684 Msa0706430:intron 40.0%
TGCAGCACAAAAAAGAGAAC+AGG - chr4_4:79395959-79395978 None:intergenic 40.0%
TACCAGTGACCTTTGTAACT+TGG + chr4_4:79396089-79396108 Msa0706430:intron 40.0%
AACCAAGTTACAAAGGTCAC+TGG - chr4_4:79396094-79396113 None:intergenic 40.0%
CACATGGAACCAAGTTACAA+AGG - chr4_4:79396101-79396120 None:intergenic 40.0%
GAAGCACAGATGATAAGATC+TGG - chr4_4:79396233-79396252 None:intergenic 40.0%
AAGAACCAATGGTAACCACT+TGG - chr4_4:79396281-79396300 None:intergenic 40.0%
!! GAACTACATTCGAGTTGGTT+CGG - chr4_4:79396819-79396838 None:intergenic 40.0%
GACAATTGATCCGTTGAACT+TGG + chr4_4:79396851-79396870 Msa0706430:intron 40.0%
GGTTCATGAACCAAGTTCAA+CGG - chr4_4:79396864-79396883 None:intergenic 40.0%
GGAACGGATGGGTAAAAAAA+GGG - chr4_4:79397130-79397149 None:intergenic 40.0%
TGGAACGGATGGGTAAAAAA+AGG - chr4_4:79397131-79397150 None:intergenic 40.0%
AGATAGACAATGGAACGGAT+GGG - chr4_4:79397141-79397160 None:intergenic 40.0%
TAGATAGACAATGGAACGGA+TGG - chr4_4:79397142-79397161 None:intergenic 40.0%
ATCCGTTCCATTGTCTATCT+AGG + chr4_4:79397141-79397160 Msa0706430:intron 40.0%
AATTCATATGCGAAGCCCTT+TGG + chr4_4:79397279-79397298 Msa0706430:intron 40.0%
GGTCCCTTAGTTGTTTGTAT+AGG + chr4_4:79397328-79397347 Msa0706430:intron 40.0%
!! TGAAGCTTGTTGATGCCTAA+AGG + chr4_4:79397548-79397567 Msa0706430:intron 40.0%
! ATTTGGTTCAGCTCGAAACT+CGG - chr4_4:79398002-79398021 None:intergenic 40.0%
! CACAATAAAAGTGGAGGTGT+CGG + chr4_4:79398227-79398246 Msa0706430:intron 40.0%
! AGGTGGTGGTAATGTAAAAC+TGG - chr4_4:79399166-79399185 None:intergenic 40.0%
AGTGAAGAAGAAGATGAAGG+TGG - chr4_4:79399183-79399202 None:intergenic 40.0%
GGTCAAAGAAGAAGGTTAAG+AGG - chr4_4:79399326-79399345 None:intergenic 40.0%
! CAGTATTGAACTAGAAGGCA+TGG - chr4_4:79399829-79399848 None:intergenic 40.0%
TCCTTAGATTAGGTCCAATC+AGG + chr4_4:79399901-79399920 Msa0706430:intron 40.0%
CCTTAGATTAGGTCCAATCA+GGG + chr4_4:79399902-79399921 Msa0706430:intron 40.0%
ATGGAGCTGGACATATATGA+TGG + chr4_4:79399925-79399944 Msa0706430:intron 40.0%
TAAGTTTGGCATTGTTGCAG+TGG - chr4_4:79400324-79400343 None:intergenic 40.0%
GCAAGCAAAATTGAACCTTG+CGG + chr4_4:79400430-79400449 Msa0706430:intron 40.0%
TGCTCATTGGAAATCAAGCA+CGG - chr4_4:79400468-79400487 None:intergenic 40.0%
TATAGGGTGGAAAAGGAAAG+AGG - chr4_4:79400703-79400722 None:intergenic 40.0%
! CTCTACAAATGGGCTTAACT+GGG - chr4_4:79400745-79400764 None:intergenic 40.0%
TAAGCCCATTTGTAGAGCTT+AGG + chr4_4:79400748-79400767 Msa0706430:intron 40.0%
CTAGACCTAAGCTCTACAAA+TGG - chr4_4:79400756-79400775 None:intergenic 40.0%
AAGACAACGCTGTTCTTCAA+GGG - chr4_4:79400803-79400822 None:intergenic 40.0%
GGGAAGGATACATTTCTACT+CGG - chr4_4:79400852-79400871 None:intergenic 40.0%
TCGGGAAATAGTTCAACAAG+AGG - chr4_4:79400904-79400923 None:intergenic 40.0%
TGACTTCAGATAGCAACACT+CGG - chr4_4:79400923-79400942 None:intergenic 40.0%
! GTTGCTATCTGAAGTCATCA+AGG + chr4_4:79400926-79400945 Msa0706430:intron 40.0%
CTTTGATCCAGCTGGAATTA+TGG + chr4_4:79400974-79400993 Msa0706430:intron 40.0%
TCCAGCTGGAATTATGGAAT+CGG + chr4_4:79400980-79400999 Msa0706430:intron 40.0%
!! ACAAATTTTAAGGGTCCTCG+TGG - chr4_4:79401025-79401044 None:intergenic 40.0%
! GCTTTATGGCTTGTAAAGCA+TGG - chr4_4:79401069-79401088 None:intergenic 40.0%
!! ACTACAGGTTTTGTGTTGCA+GGG - chr4_4:79401300-79401319 None:intergenic 40.0%
!! TACTACAGGTTTTGTGTTGC+AGG - chr4_4:79401301-79401320 None:intergenic 40.0%
TACTGAAATTTGGGCTCCAA+TGG + chr4_4:79401355-79401374 Msa0706430:intron 40.0%
AACAATGTCAGATCTGCCAT+TGG - chr4_4:79401374-79401393 None:intergenic 40.0%
AATGGCAGATCTGACATTGT+TGG + chr4_4:79401373-79401392 Msa0706430:intron 40.0%
AAGCGGAAAATATGAGCGTT+AGG - chr4_4:79401424-79401443 None:intergenic 40.0%
ATGTGTGAGGAAGAATCTAC+TGG - chr4_4:79401484-79401503 None:intergenic 40.0%
TGATACTTTGCAACGCTACA+GGG - chr4_4:79401532-79401551 None:intergenic 40.0%
TTGATACTTTGCAACGCTAC+AGG - chr4_4:79401533-79401552 None:intergenic 40.0%
TGAACTTTAGTAGACACCGA+GGG + chr4_4:79401637-79401656 Msa0706430:intron 40.0%
TTTGTTCTTAGTGTTGCCCT+CGG - chr4_4:79401656-79401675 None:intergenic 40.0%
AGGGCAACACTAAGAACAAA+AGG + chr4_4:79401656-79401675 Msa0706430:intron 40.0%
GTTAATTCTGGTCCAACATC+AGG - chr4_4:79401707-79401726 None:intergenic 40.0%
TGGTCAGATAAACAAAGGCA+AGG - chr4_4:79401797-79401816 None:intergenic 40.0%
CAGCTTGGTCAGATAAACAA+AGG - chr4_4:79401802-79401821 None:intergenic 40.0%
TTCAGTGTCTTGCCATTATC+TGG + chr4_4:79401844-79401863 Msa0706430:intron 40.0%
TCAGTGTCTTGCCATTATCT+GGG + chr4_4:79401845-79401864 Msa0706430:intron 40.0%
! CAGGCTTTTCGATGTTTTGT+GGG - chr4_4:79401875-79401894 None:intergenic 40.0%
! TCAGGCTTTTCGATGTTTTG+TGG - chr4_4:79401876-79401895 None:intergenic 40.0%
! GCTTAACATGCTCTCTGAAA+TGG + chr4_4:79401945-79401964 Msa0706430:intron 40.0%
TAATCTTGTGTCTGTAGGCT+CGG + chr4_4:79402082-79402101 Msa0706430:intron 40.0%
CTCAAAATTCCAAGTGACCA+AGG - chr4_4:79402180-79402199 None:intergenic 40.0%
! CTTGGTCACTTGGAATTTTG+AGG + chr4_4:79402178-79402197 Msa0706430:intron 40.0%
!! TCTGTTTCTGGAGATACAGT+AGG + chr4_4:79402252-79402271 Msa0706430:intron 40.0%
!! CTGTTTCTGGAGATACAGTA+GGG + chr4_4:79402253-79402272 Msa0706430:intron 40.0%
GAACTAATTGTAGGTAGTGC+TGG + chr4_4:79402365-79402384 Msa0706430:intron 40.0%
AAAACCTTCAACCTTCCAAC+CGG - chr4_4:79394136-79394155 None:intergenic 40.0%
!! ACATATGGGTTAGGCATCTT+GGG - chr4_4:79402481-79402500 None:intergenic 40.0%
!! AACATATGGGTTAGGCATCT+TGG - chr4_4:79402482-79402501 None:intergenic 40.0%
GATCTCAGCAGCAAACATAT+GGG - chr4_4:79394221-79394240 None:intergenic 40.0%
AGATCTCAGCAGCAAACATA+TGG - chr4_4:79394222-79394241 None:intergenic 40.0%
CTTCTTCAGGATTAAGGGTT+CGG - chr4_4:79402550-79402569 None:intergenic 40.0%
ATCATTCGAGGCGACTTAAA+GGG - chr4_4:79402635-79402654 None:intergenic 40.0%
TTTGTGGTTCCTCATGACTT+TGG + chr4_4:79394451-79394470 Msa0706430:intron 40.0%
TTGTGGTTCCTCATGACTTT+GGG + chr4_4:79394452-79394471 Msa0706430:intron 40.0%
GAAGAGAAGGCAATTGAAAG+AGG + chr4_4:79394620-79394639 Msa0706430:intron 40.0%
GCTACCTTGGTTCAAACATT+TGG + chr4_4:79394665-79394684 Msa0706430:intron 40.0%
!! ATTTTCTGTGGTGGAGCATA+TGG - chr4_4:79394737-79394756 None:intergenic 40.0%
! AAGTGGGTATGCATTTTCTG+TGG - chr4_4:79403020-79403039 None:intergenic 40.0%
! GGTCTTATCAGGAATCAAGT+GGG - chr4_4:79403036-79403055 None:intergenic 40.0%
GTACACAAAAATTGACCTGG+GGG - chr4_4:79403057-79403076 None:intergenic 40.0%
! CGAGGACTGTTTTATGATGT+TGG + chr4_4:79394809-79394828 Msa0706430:intron 40.0%
CTTGCATAATAACCACCTTC+AGG - chr4_4:79403113-79403132 None:intergenic 40.0%
CTGAAGGTGGTTATTATGCA+AGG + chr4_4:79403111-79403130 Msa0706430:CDS 40.0%
AGGTGGTTATTATGCAAGGT+AGG + chr4_4:79403115-79403134 Msa0706430:intron 40.0%
ATCGGTCCAAACTTCAAATG+AGG + chr4_4:79403145-79403164 Msa0706430:intron 40.0%
TCGGTCCAAACTTCAAATGA+GGG + chr4_4:79403146-79403165 Msa0706430:intron 40.0%
! GCATGCATTCTTTTACCGAA+AGG + chr4_4:79403225-79403244 Msa0706430:intron 40.0%
! TCTTTTACCGAAAGGCGAAA+AGG + chr4_4:79403233-79403252 Msa0706430:intron 40.0%
CAAGTAATGCATACACGTCT+TGG + chr4_4:79403403-79403422 Msa0706430:intron 40.0%
TGGTCAATCTGTCTGTGATT+TGG + chr4_4:79403482-79403501 Msa0706430:intron 40.0%
TCCGTCGAAATGTCAAATAG+TGG - chr4_4:79403559-79403578 None:intergenic 40.0%
GCATCCAACAACATATTACG+AGG + chr4_4:79403579-79403598 Msa0706430:CDS 40.0%
AAGTGGGCATAGACAAAACA+CGG - chr4_4:79403617-79403636 None:intergenic 40.0%
TTGGTTGAAGCTGTGGTATT+TGG + chr4_4:79395347-79395366 Msa0706430:intron 40.0%
GTGAGTATGGTATCCAACTT+GGG - chr4_4:79395470-79395489 None:intergenic 40.0%
TGTGAGTATGGTATCCAACT+TGG - chr4_4:79395471-79395490 None:intergenic 40.0%
TCCCACCAGAAGTTATACTA+AGG + chr4_4:79403809-79403828 Msa0706430:CDS 40.0%
!! GCCTTCCATCAAGTTCTAAA+TGG + chr4_4:79403904-79403923 Msa0706430:CDS 40.0%
AAGAATACACTCCTGTCATG+TGG - chr4_4:79395632-79395651 None:intergenic 40.0%
GACTGTTAAAACTGCTACCA+AGG - chr4_4:79404024-79404043 None:intergenic 40.0%
!! TAGCAGTTTTAACAGTCCTG+AGG + chr4_4:79404027-79404046 Msa0706430:exon 40.0%
ATCCTCCCCAAAATGTTCAT+AGG + chr4_4:79404079-79404098 Msa0706430:three_prime_UTR 40.0%
TCCTCCCCAAAATGTTCATA+GGG + chr4_4:79404080-79404099 Msa0706430:three_prime_UTR 40.0%
GAAAACAGACACTCCTACTA+AGG - chr4_4:79404243-79404262 None:intergenic 40.0%
! GTCTGTTTTCTCTTGTGTCA+CGG + chr4_4:79404253-79404272 Msa0706430:three_prime_UTR 40.0%
! TGTGTGTGTGGATTTAGGTT+AGG + chr4_4:79404475-79404494 Msa0706430:three_prime_UTR 40.0%
! GTGTGGATTTAGGTTAGGTT+AGG + chr4_4:79404480-79404499 Msa0706430:three_prime_UTR 40.0%
!! TCTGGCTTGCTTAGAAGAAA+CGG + chr4_4:79404516-79404535 Msa0706430:three_prime_UTR 40.0%
AGAGACAGGTTAGAAGAGTG+AGG - chr4_4:79392207-79392226 None:intergenic 45.0%
! TTCTGAGAAGCAACAGAGAC+AGG - chr4_4:79392221-79392240 None:intergenic 45.0%
AGCTGGAAGGAAAGGGAAAT+GGG - chr4_4:79392247-79392266 None:intergenic 45.0%
TAGCTGGAAGGAAAGGGAAA+TGG - chr4_4:79392248-79392267 None:intergenic 45.0%
GGGGTTTCAATGGAATTAGC+TGG - chr4_4:79392264-79392283 None:intergenic 45.0%
! ATGTGATCTGCTCTGGATTG+AGG + chr4_4:79392706-79392725 Msa0706430:intron 45.0%
! GCTCTGGATTGAGGTTGATT+AGG + chr4_4:79392715-79392734 Msa0706430:intron 45.0%
ACTCTGCATTATGCTCCGTT+AGG + chr4_4:79392911-79392930 Msa0706430:intron 45.0%
TGTTGAAACTCTCACCCATC+CGG + chr4_4:79393053-79393072 Msa0706430:intron 45.0%
TAACCGTGACATAACCGGAT+GGG - chr4_4:79393070-79393089 None:intergenic 45.0%
TGACGTAACCGTGACATAAC+CGG - chr4_4:79393075-79393094 None:intergenic 45.0%
TCCAAGCAAATTGGGACCTT+AGG + chr4_4:79393597-79393616 Msa0706430:intron 45.0%
! TCCTAAGGTCCCAATTTGCT+TGG - chr4_4:79393601-79393620 None:intergenic 45.0%
GTGTACCTCTTACGTAAGTG+CGG + chr4_4:79393688-79393707 Msa0706430:intron 45.0%
TAGGGATTCTTGCTGAATCC+CGG + chr4_4:79393744-79393763 Msa0706430:intron 45.0%
! TACAACAAAAGCACATCCCC+GGG + chr4_4:79393878-79393897 Msa0706430:intron 45.0%
GAACCAATTGTAGGTAGTGC+TGG + chr4_4:79394091-79394110 Msa0706430:intron 45.0%
GTATTGGAAGATGATCCGGT+TGG + chr4_4:79394118-79394137 Msa0706430:intron 45.0%
! ACATATGGGTGAGGCATCTT+GGG - chr4_4:79394207-79394226 None:intergenic 45.0%
! AACATATGGGTGAGGCATCT+TGG - chr4_4:79394208-79394227 None:intergenic 45.0%
ATCAGCCTCTTCAGGGTTAA+GGG - chr4_4:79394281-79394300 None:intergenic 45.0%
AATCAGCCTCTTCAGGGTTA+AGG - chr4_4:79394282-79394301 None:intergenic 45.0%
TTAACCCTGAAGAGGCTGAT+TGG + chr4_4:79394281-79394300 Msa0706430:intron 45.0%
AAGTCACAGGTTGTGTAGAC+AGG - chr4_4:79394316-79394335 None:intergenic 45.0%
ACCTGTGACTTGACACCAAA+TGG + chr4_4:79394325-79394344 Msa0706430:intron 45.0%
TGTGGTTCCTCATGACTTTG+GGG + chr4_4:79394453-79394472 Msa0706430:intron 45.0%
AAACATGCCCCAAAGTCATG+AGG - chr4_4:79394463-79394482 None:intergenic 45.0%
TATGTTACATGACCCACGTG+AGG - chr4_4:79394584-79394603 None:intergenic 45.0%
! TGGGAATGCATTTTCTGTGG+TGG - chr4_4:79394746-79394765 None:intergenic 45.0%
! AGGTGGGAATGCATTTTCTG+TGG - chr4_4:79394749-79394768 None:intergenic 45.0%
GATGTTGGAAATGACCCTGA+AGG + chr4_4:79394824-79394843 Msa0706430:intron 45.0%
CTTGCATAGTATCCACCTTC+AGG - chr4_4:79394842-79394861 None:intergenic 45.0%
CTGAAGGTGGATACTATGCA+AGG + chr4_4:79394840-79394859 Msa0706430:intron 45.0%
TTCAGAGTAGAAGGATGAGC+CGG - chr4_4:79394951-79394970 None:intergenic 45.0%
! TGTCGCCTTTTCAGAGTAGA+AGG - chr4_4:79394960-79394979 None:intergenic 45.0%
CACAGCCAGTTTGAATAGTC+AGG - chr4_4:79395166-79395185 None:intergenic 45.0%
CCACAGCTTCAACCAATCTT+GGG - chr4_4:79395343-79395362 None:intergenic 45.0%
ACCACAGCTTCAACCAATCT+TGG - chr4_4:79395344-79395363 None:intergenic 45.0%
ATCTTCCCATGGTATTGCGT+CGG - chr4_4:79395417-79395436 None:intergenic 45.0%
AACACCCCAATATCTTCCCA+TGG - chr4_4:79395428-79395447 None:intergenic 45.0%
TGAGCAAGATGTTCCCAAGT+TGG + chr4_4:79395454-79395473 Msa0706430:intron 45.0%
! CAATTCAAGCTTTTCTCCCC+TGG - chr4_4:79395659-79395678 None:intergenic 45.0%
CAGGGGAGAAAAGCTTGAAT+TGG + chr4_4:79395657-79395676 Msa0706430:intron 45.0%
! AAGGTTTAAGGTCACCGACA+GGG - chr4_4:79395691-79395710 None:intergenic 45.0%
TGCTTTCAAAACGTGTTCCC+TGG + chr4_4:79395920-79395939 Msa0706430:intron 45.0%
GGATTCCAAGTGGTTACCAT+TGG + chr4_4:79396273-79396292 Msa0706430:intron 45.0%
! CGTTTTCTCTTCTTCTCCGA+CGG + chr4_4:79397247-79397266 Msa0706430:intron 45.0%
ATGAATTTGCCTATGGCCGT+CGG - chr4_4:79397266-79397285 None:intergenic 45.0%
TACGTTGGATGCAATGACTG+AGG - chr4_4:79398261-79398280 None:intergenic 45.0%
! GTCGATTCAACTAGGACTTG+TGG + chr4_4:79398297-79398316 Msa0706430:intron 45.0%
! GACAGCAGTTGGTGCAAAAA+TGG + chr4_4:79399076-79399095 Msa0706430:intron 45.0%
GAAGAAGAAGATGAAGGTGG+TGG - chr4_4:79399180-79399199 None:intergenic 45.0%
TTGATGCTGTTGAGCTTCGT+AGG + chr4_4:79399490-79399509 Msa0706430:CDS 45.0%
CCCTGATTGGACCTAATCTA+AGG - chr4_4:79399905-79399924 None:intergenic 45.0%
AGATTAGGTCCAATCAGGGA+TGG + chr4_4:79399906-79399925 Msa0706430:intron 45.0%
GAGCTGGACATATATGATGG+CGG + chr4_4:79399928-79399947 Msa0706430:intron 45.0%
AGCTGGACATATATGATGGC+GGG + chr4_4:79399929-79399948 Msa0706430:intron 45.0%
CCGGTAATACAGCAGATTTG+CGG - chr4_4:79400044-79400063 None:intergenic 45.0%
CCGCAAATCTGCTGTATTAC+CGG + chr4_4:79400041-79400060 Msa0706430:intron 45.0%
AGTTAGTAACCACTGGGGTT+GGG - chr4_4:79400662-79400681 None:intergenic 45.0%
TCTGGCAGTTAGTAACCACT+GGG - chr4_4:79400668-79400687 None:intergenic 45.0%
TTCTGGCAGTTAGTAACCAC+TGG - chr4_4:79400669-79400688 None:intergenic 45.0%
! GCTCTACAAATGGGCTTAAC+TGG - chr4_4:79400746-79400765 None:intergenic 45.0%
GTAGAGCTTAGGTCTAGATC+TGG + chr4_4:79400759-79400778 Msa0706430:intron 45.0%
AGACAACGCTGTTCTTCAAG+GGG - chr4_4:79400802-79400821 None:intergenic 45.0%
GAAGACAACGCTGTTCTTCA+AGG - chr4_4:79400804-79400823 None:intergenic 45.0%
GAAGAACAGCGTTGTCTTCA+AGG + chr4_4:79400805-79400824 Msa0706430:intron 45.0%
GACTTCAGATAGCAACACTC+GGG - chr4_4:79400922-79400941 None:intergenic 45.0%
TCCGATTCCATAATTCCAGC+TGG - chr4_4:79400984-79401003 None:intergenic 45.0%
ATACAGAGATAGTGACCACG+AGG + chr4_4:79401007-79401026 Msa0706430:intron 45.0%
! CTCCCTATGTACTTGGTCTT+TGG - chr4_4:79401095-79401114 None:intergenic 45.0%
! TTGTGACAGCTCTCTAGGAA+AGG - chr4_4:79401165-79401184 None:intergenic 45.0%
GCTGTCACAATCGAGTTTCA+AGG + chr4_4:79401175-79401194 Msa0706430:intron 45.0%
GAAAGATAGCTATGAGGGCA+AGG + chr4_4:79401271-79401290 Msa0706430:intron 45.0%
!! CTACAGGTTTTGTGTTGCAG+GGG - chr4_4:79401299-79401318 None:intergenic 45.0%
!! CTCGGTGTCTACTAAAGTTC+AGG - chr4_4:79401638-79401657 None:intergenic 45.0%
CTGAACTTTAGTAGACACCG+AGG + chr4_4:79401636-79401655 Msa0706430:intron 45.0%
CTCGATACAGTTCCTGATGT+TGG + chr4_4:79401692-79401711 Msa0706430:intron 45.0%
!! TGTGTTAGGATACTGGCTCT+GGG - chr4_4:79402035-79402054 None:intergenic 45.0%
!! AGGTAGTGCTGGTGATGTAT+TGG + chr4_4:79402376-79402395 Msa0706430:intron 45.0%
GTATTGGAAGATGATCCGGT+TGG + chr4_4:79394118-79394137 Msa0706430:intron 45.0%
CAGCAGCAAACATATGGGTT+AGG - chr4_4:79402490-79402509 None:intergenic 45.0%
CTGCTGAGATCTTTATGCAC+CGG + chr4_4:79402504-79402523 Msa0706430:CDS 45.0%
CAGCGCTAGATAAGAGAAAC+CGG - chr4_4:79402526-79402545 None:intergenic 45.0%
AGTCACAGGTGGTGTATACA+GGG - chr4_4:79402589-79402608 None:intergenic 45.0%
AAGTCACAGGTGGTGTATAC+AGG - chr4_4:79402590-79402609 None:intergenic 45.0%
!! ATTTGGTGTCAAGTCACAGG+TGG - chr4_4:79394326-79394345 None:intergenic 45.0%
ACCTGTGACTTGACACCAAA+TGG + chr4_4:79394325-79394344 Msa0706430:intron 45.0%
GAGGCGACTTAAAGGGTAAA+GGG - chr4_4:79402628-79402647 None:intergenic 45.0%
CATCATTCGAGGCGACTTAA+AGG - chr4_4:79402636-79402655 None:intergenic 45.0%
ATGGCACTTCTCATCATTCG+AGG - chr4_4:79402647-79402666 None:intergenic 45.0%
CCTTATTGGAACCGAACAGA+GGG + chr4_4:79402689-79402708 Msa0706430:CDS 45.0%
TGTGGTTCCTCATGACTTTG+GGG + chr4_4:79394453-79394472 Msa0706430:intron 45.0%
AAACATGCCCCAAAGTCATG+AGG - chr4_4:79394463-79394482 None:intergenic 45.0%
CTGCCCAAATGTTTGAACCA+AGG - chr4_4:79402943-79402962 None:intergenic 45.0%
TGGTTCAAACATTTGGGCAG+AGG + chr4_4:79402943-79402962 Msa0706430:CDS 45.0%
! TGGGTATGCATTTTCTGTGG+TGG - chr4_4:79403017-79403036 None:intergenic 45.0%
! GGGTCTTATCAGGAATCAAG+TGG - chr4_4:79403037-79403056 None:intergenic 45.0%
GATGTTGGAAATGACCCTGA+AGG + chr4_4:79394824-79394843 Msa0706430:intron 45.0%
! TCCATTGCCTTTTCGCCTTT+CGG - chr4_4:79403243-79403262 None:intergenic 45.0%
CACAGACAGATTGACCAGTT+AGG - chr4_4:79403479-79403498 None:intergenic 45.0%
! GTGTTTTGTCTATGCCCACT+TGG + chr4_4:79403616-79403635 Msa0706430:CDS 45.0%
TTTGTCTATGCCCACTTGGA+TGG + chr4_4:79403620-79403639 Msa0706430:CDS 45.0%
TTGTCTATGCCCACTTGGAT+GGG + chr4_4:79403621-79403640 Msa0706430:CDS 45.0%
CCACAGCTTCAACCAATCTT+GGG - chr4_4:79395343-79395362 None:intergenic 45.0%
ACCACAGCTTCAACCAATCT+TGG - chr4_4:79395344-79395363 None:intergenic 45.0%
TGCTTGCTTCATAGAAGGGT+TGG - chr4_4:79403851-79403870 None:intergenic 45.0%
AAGGGGAGAAGAGCTTGAAT+TGG + chr4_4:79403971-79403990 Msa0706430:CDS 45.0%
AAGAGCTTGAATTGGACTGC+TGG + chr4_4:79403979-79403998 Msa0706430:CDS 45.0%
! AAGGTTTAAGGTCGCCAACA+GGG - chr4_4:79404005-79404024 None:intergenic 45.0%
CCTCCCCAAAATGTTCATAG+GGG + chr4_4:79404081-79404100 Msa0706430:three_prime_UTR 45.0%
! CGACCCCTATGAACATTTTG+GGG - chr4_4:79404087-79404106 None:intergenic 45.0%
! CCGACCCCTATGAACATTTT+GGG - chr4_4:79404088-79404107 None:intergenic 45.0%
CCCAAAATGTTCATAGGGGT+CGG + chr4_4:79404085-79404104 Msa0706430:three_prime_UTR 45.0%
! ACCGACCCCTATGAACATTT+TGG - chr4_4:79404089-79404108 None:intergenic 45.0%
!! TCCACAAAAAAAGGGCACCT+CGG - chr4_4:79404114-79404133 None:intergenic 45.0%
TTTCTCTTGTGTCACGGCAT+TGG + chr4_4:79404259-79404278 Msa0706430:three_prime_UTR 45.0%
GTGTCTGTGTGTGTGGATTT+AGG + chr4_4:79404470-79404489 Msa0706430:three_prime_UTR 45.0%
AGTTTATTCTCCAGGTAGGG+TGG + chr4_4:79404714-79404733 Msa0706430:three_prime_UTR 45.0%
!! AAAAGTAAAAAAATTATTAA+TGG - chr4_4:79398437-79398456 None:intergenic 5.0%
!!! ATATGTTATTTAAAATTTAT+TGG + chr4_4:79402780-79402799 Msa0706430:intron 5.0%
TTGATGCTGTGGAGTTGCAC+AGG + chr4_4:79392480-79392499 Msa0706430:intron 50.0%
TCACCCATCCGGTTATGTCA+CGG + chr4_4:79393064-79393083 Msa0706430:intron 50.0%
GTAACCGTGACATAACCGGA+TGG - chr4_4:79393071-79393090 None:intergenic 50.0%
TGCATCCGCACTTACGTAAG+AGG - chr4_4:79393696-79393715 None:intergenic 50.0%
AGGGATTCTTGCTGAATCCC+GGG + chr4_4:79393745-79393764 Msa0706430:intron 50.0%
! ACAACAAAAGCACATCCCCG+GGG + chr4_4:79393879-79393898 Msa0706430:intron 50.0%
ACTTAAAACTCCAGGACCCC+GGG - chr4_4:79393898-79393917 None:intergenic 50.0%
GACTTAAAACTCCAGGACCC+CGG - chr4_4:79393899-79393918 None:intergenic 50.0%
TCGCCAGCACTACCTACAAT+TGG - chr4_4:79394097-79394116 None:intergenic 50.0%
!! AGGTAGTGCTGGCGATGTAT+TGG + chr4_4:79394102-79394121 Msa0706430:intron 50.0%
TGGAAGATGATCCGGTTGGA+AGG + chr4_4:79394122-79394141 Msa0706430:intron 50.0%
TGATCCGGTTGGAAGGTTGA+AGG + chr4_4:79394129-79394148 Msa0706430:intron 50.0%
CAGCAGCAAACATATGGGTG+AGG - chr4_4:79394216-79394235 None:intergenic 50.0%
CCTCTTCAGGGTTAAGGGTT+CGG - chr4_4:79394276-79394295 None:intergenic 50.0%
!! GCCATTTGGTGTCAAGTCAC+AGG - chr4_4:79394329-79394348 None:intergenic 50.0%
AAGGGTAAAGGGAGGCCATT+TGG - chr4_4:79394343-79394362 None:intergenic 50.0%
ATGGCACTCCTCATCATTCG+TGG - chr4_4:79394373-79394392 None:intergenic 50.0%
CCCTCTGTTCGGTTCCAATA+GGG - chr4_4:79394418-79394437 None:intergenic 50.0%
CCCTATTGGAACCGAACAGA+GGG + chr4_4:79394415-79394434 Msa0706430:intron 50.0%
CCTATTGGAACCGAACAGAG+GGG + chr4_4:79394416-79394435 Msa0706430:intron 50.0%
CTATTGGAACCGAACAGAGG+GGG + chr4_4:79394417-79394436 Msa0706430:intron 50.0%
! TTCTGTGGTGGAGCATATGG+AGG - chr4_4:79394734-79394753 None:intergenic 50.0%
GTTGGAAATGACCCTGAAGG+TGG + chr4_4:79394827-79394846 Msa0706430:intron 50.0%
AGGTGCAAGAGCAGCAGTAT+GGG + chr4_4:79395202-79395221 Msa0706430:intron 50.0%
! GTGTTTTGTCCATGCCCACT+TGG + chr4_4:79395302-79395321 Msa0706430:intron 50.0%
TTTGTCCATGCCCACTTGGA+TGG + chr4_4:79395306-79395325 Msa0706430:intron 50.0%
TTGTCCATGCCCACTTGGAT+GGG + chr4_4:79395307-79395326 Msa0706430:intron 50.0%
AACCAATCTTGGGCTCCAAG+GGG - chr4_4:79395333-79395352 None:intergenic 50.0%
CAACCAATCTTGGGCTCCAA+GGG - chr4_4:79395334-79395353 None:intergenic 50.0%
TCAACCAATCTTGGGCTCCA+AGG - chr4_4:79395335-79395354 None:intergenic 50.0%
! CCCAAGATTGGTTGAAGCTG+TGG + chr4_4:79395340-79395359 Msa0706430:intron 50.0%
! CATGGTATTGCGTCGGCAAA+CGG - chr4_4:79395410-79395429 None:intergenic 50.0%
GTTTGCCGACGCAATACCAT+GGG + chr4_4:79395409-79395428 Msa0706430:intron 50.0%
TGGTCGGATCGATGTGAGTA+TGG - chr4_4:79395483-79395502 None:intergenic 50.0%
! CAAGGTTTAAGGTCACCGAC+AGG - chr4_4:79395692-79395711 None:intergenic 50.0%
CTGTCGGTGACCTTAAACCT+TGG + chr4_4:79395690-79395709 Msa0706430:intron 50.0%
AACGTGTTCCCTGGTCTAGT+AGG + chr4_4:79395929-79395948 Msa0706430:intron 50.0%
GGTAATTTGGGTCACGGCTT+TGG + chr4_4:79395989-79396008 Msa0706430:intron 50.0%
! ATTTGAGTTCGCGAGCAGCT+CGG - chr4_4:79397935-79397954 None:intergenic 50.0%
! CGGCTCGACTCGATAAGATT+TGG - chr4_4:79398019-79398038 None:intergenic 50.0%
TAACCCCAACAGACAGCAGT+TGG + chr4_4:79399065-79399084 Msa0706430:intron 50.0%
TGCACCAACTGCTGTCTGTT+GGG - chr4_4:79399072-79399091 None:intergenic 50.0%
TTGCACCAACTGCTGTCTGT+TGG - chr4_4:79399073-79399092 None:intergenic 50.0%
! GCTGGACATATATGATGGCG+GGG + chr4_4:79399930-79399949 Msa0706430:intron 50.0%
CCAAACTTACGTCCATCCCT+GGG + chr4_4:79400335-79400354 Msa0706430:intron 50.0%
AGTTGCTGACATTGGACCCA+GGG - chr4_4:79400354-79400373 None:intergenic 50.0%
CGGCCCTATTTATAACCGCA+AGG - chr4_4:79400448-79400467 None:intergenic 50.0%
TGTGCACATTGAGAGGGAGT+AGG - chr4_4:79400507-79400526 None:intergenic 50.0%
TACTCCCTCTCAATGTGCAC+AGG + chr4_4:79400506-79400525 Msa0706430:intron 50.0%
GTGTCCTGTGCACATTGAGA+GGG - chr4_4:79400513-79400532 None:intergenic 50.0%
TGTGTCCTGTGCACATTGAG+AGG - chr4_4:79400514-79400533 None:intergenic 50.0%
CAGTTAGTAACCACTGGGGT+TGG - chr4_4:79400663-79400682 None:intergenic 50.0%
CTGGCAGTTAGTAACCACTG+GGG - chr4_4:79400667-79400686 None:intergenic 50.0%
GAAAAGGAAAGAGGCGGTCA+TGG - chr4_4:79400694-79400713 None:intergenic 50.0%
AGGGTGGAAAAGGAAAGAGG+CGG - chr4_4:79400700-79400719 None:intergenic 50.0%
TTCAAGGGGTGGGTCATGTT+AGG - chr4_4:79400788-79400807 None:intergenic 50.0%
AACGCTGTTCTTCAAGGGGT+GGG - chr4_4:79400798-79400817 None:intergenic 50.0%
CAGCGTTGTCTTCAAGGATG+AGG + chr4_4:79400811-79400830 Msa0706430:intron 50.0%
TCCTTCCCAGCTATGACTAG+AGG + chr4_4:79400864-79400883 Msa0706430:intron 50.0%
CCTTCCCAGCTATGACTAGA+GGG + chr4_4:79400865-79400884 Msa0706430:intron 50.0%
CAGTCCCTCTAGTCATAGCT+GGG - chr4_4:79400872-79400891 None:intergenic 50.0%
TCAGTCCCTCTAGTCATAGC+TGG - chr4_4:79400873-79400892 None:intergenic 50.0%
CTCGATTGTGACAGCTCTCT+AGG - chr4_4:79401170-79401189 None:intergenic 50.0%
CAACGCTACAGGGTTGTTGT+TGG - chr4_4:79401522-79401541 None:intergenic 50.0%
ACTCTCGGCTCATGTGTATG+TGG + chr4_4:79401612-79401631 Msa0706430:intron 50.0%
!! GGCAAGACACTGAAAGCGTT+TGG - chr4_4:79401838-79401857 None:intergenic 50.0%
TTGTGGGTGTGCCCAGATAA+TGG - chr4_4:79401859-79401878 None:intergenic 50.0%
!! GTGTTAGGATACTGGCTCTG+GGG - chr4_4:79402034-79402053 None:intergenic 50.0%
!! GTGTGTTAGGATACTGGCTC+TGG - chr4_4:79402036-79402055 None:intergenic 50.0%
TGTGCACATCCTTGGTCACT+TGG + chr4_4:79402168-79402187 Msa0706430:intron 50.0%
TGGAAGATGATCCGGTTGGA+AGG + chr4_4:79394122-79394141 Msa0706430:intron 50.0%
TGATCCGGTTGGAAGGTTGA+AGG + chr4_4:79394129-79394148 Msa0706430:intron 50.0%
GTCACAGGTGGTGTATACAG+GGG - chr4_4:79402588-79402607 None:intergenic 50.0%
!! GCCATTTGGTGTCAAGTCAC+AGG - chr4_4:79394329-79394348 None:intergenic 50.0%
AAGGGTAAAGGGAGGCCATT+TGG - chr4_4:79394343-79394362 None:intergenic 50.0%
GCGACTTAAAGGGTAAAGGG+AGG - chr4_4:79402625-79402644 None:intergenic 50.0%
CGAGGCGACTTAAAGGGTAA+AGG - chr4_4:79402629-79402648 None:intergenic 50.0%
! GCCTTATTGGAACCGAACAG+AGG + chr4_4:79402688-79402707 Msa0706430:CDS 50.0%
CCCTCTGTTCGGTTCCAATA+AGG - chr4_4:79394418-79394437 None:intergenic 50.0%
! AATGATCGGCTCCCTCTGTT+CGG - chr4_4:79402703-79402722 None:intergenic 50.0%
GGGAGCCGATCATTTCTTTG+TGG + chr4_4:79402709-79402728 Msa0706430:CDS 50.0%
TGGTGGAGCATATGGAGGAA+TGG - chr4_4:79394729-79394748 None:intergenic 50.0%
! TTCTGTGGTGGAGCATATGG+AGG - chr4_4:79394734-79394753 None:intergenic 50.0%
TGATTCCTGATAAGACCCCC+AGG + chr4_4:79403039-79403058 Msa0706430:CDS 50.0%
! ATTGACCTGGGGGTCTTATC+AGG - chr4_4:79403047-79403066 None:intergenic 50.0%
GTTGGAAATGACCCTGAAGG+TGG + chr4_4:79394827-79394846 Msa0706430:intron 50.0%
ACCGAAAGGCGAAAAGGCAA+TGG + chr4_4:79403239-79403258 Msa0706430:intron 50.0%
! TAACAGAGGTGCAAGAGCAG+CGG + chr4_4:79403510-79403529 Msa0706430:intron 50.0%
AGCGGTGTGGGAGAACTTTA+AGG + chr4_4:79403528-79403547 Msa0706430:CDS 50.0%
TCAACCAATCTTGGGCTCCA+GGG - chr4_4:79395335-79395354 None:intergenic 50.0%
TTCAACCAATCTTGGGCTCC+AGG - chr4_4:79395336-79395355 None:intergenic 50.0%
! CCCAAGATTGGTTGAAGCTG+TGG + chr4_4:79395340-79395359 Msa0706430:intron 50.0%
! CACGGTATTGCATCGGCAAA+CGG - chr4_4:79403724-79403743 None:intergenic 50.0%
GTTTGCCGATGCAATACCGT+GGG + chr4_4:79403723-79403742 Msa0706430:CDS 50.0%
CTCTTCCCACGGTATTGCAT+CGG - chr4_4:79403731-79403750 None:intergenic 50.0%
GCAATACCGTGGGAAGAGAT+CGG + chr4_4:79403733-79403752 Msa0706430:CDS 50.0%
CAATACCGTGGGAAGAGATC+GGG + chr4_4:79403734-79403753 Msa0706430:CDS 50.0%
AATACCGTGGGAAGAGATCG+GGG + chr4_4:79403735-79403754 Msa0706430:CDS 50.0%
TGAGCAGGATGTTCCCAAGT+TGG + chr4_4:79403768-79403787 Msa0706430:CDS 50.0%
TGGTGGGATCGATGTGAGTA+TGG - chr4_4:79403797-79403816 None:intergenic 50.0%
ATCTCCTGATTGTGCGGGTT+GGG - chr4_4:79403884-79403903 None:intergenic 50.0%
! AAGGCATCTCCTGATTGTGC+GGG - chr4_4:79403889-79403908 None:intergenic 50.0%
!! GAAGGCATCTCCTGATTGTG+CGG - chr4_4:79403890-79403909 None:intergenic 50.0%
! CAAGGTTTAAGGTCGCCAAC+AGG - chr4_4:79404006-79404025 None:intergenic 50.0%
CTGTTGGCGACCTTAAACCT+TGG + chr4_4:79404004-79404023 Msa0706430:CDS 50.0%
!! CCCCTATGAACATTTTGGGG+AGG - chr4_4:79404084-79404103 None:intergenic 50.0%
!!! ACCGAGGTGCCCTTTTTTTG+TGG + chr4_4:79404110-79404129 Msa0706430:three_prime_UTR 50.0%
AAGCTATCTACCACCCTACC+TGG - chr4_4:79404727-79404746 None:intergenic 50.0%
AGGTAGGGTGGTAGATAGCT+TGG + chr4_4:79404726-79404745 Msa0706430:three_prime_UTR 50.0%
AGACATGCCGACAGCGTGTT+GGG - chr4_4:79392994-79393013 None:intergenic 55.0%
GGGATTCTTGCTGAATCCCG+GGG + chr4_4:79393746-79393765 Msa0706430:intron 55.0%
CTTAAAACTCCAGGACCCCG+GGG - chr4_4:79393897-79393916 None:intergenic 55.0%
CCGAACCCTTAACCCTGAAG+AGG + chr4_4:79394273-79394292 Msa0706430:intron 55.0%
GCCCTATTGGAACCGAACAG+AGG + chr4_4:79394414-79394433 Msa0706430:intron 55.0%
CCCCTCTGTTCGGTTCCAAT+AGG - chr4_4:79394419-79394438 None:intergenic 55.0%
TAGCACGCTGTAGCAGTGGA+AGG - chr4_4:79394649-79394668 None:intergenic 55.0%
AAGGTAGCACGCTGTAGCAG+TGG - chr4_4:79394653-79394672 None:intergenic 55.0%
ACTGCTACAGCGTGCTACCT+TGG + chr4_4:79394652-79394671 Msa0706430:intron 55.0%
GAGGTGCAAGAGCAGCAGTA+TGG + chr4_4:79395201-79395220 Msa0706430:intron 55.0%
CGTTTGCCGACGCAATACCA+TGG + chr4_4:79395408-79395427 Msa0706430:intron 55.0%
TTCCCTCAACCTGCTCAAGC+TGG + chr4_4:79395563-79395582 Msa0706430:intron 55.0%
! CTCCAGCTTGAGCAGGTTGA+GGG - chr4_4:79395568-79395587 None:intergenic 55.0%
TCTCCAGCTTGAGCAGGTTG+AGG - chr4_4:79395569-79395588 None:intergenic 55.0%
! AAAGCGTCTCCAGCTTGAGC+AGG - chr4_4:79395575-79395594 None:intergenic 55.0%
AATTGGACTGCTGGCCCTGT+CGG + chr4_4:79395674-79395693 Msa0706430:intron 55.0%
CAGGCACTCCTACTAGACCA+GGG - chr4_4:79395940-79395959 None:intergenic 55.0%
ACAGGCACTCCTACTAGACC+AGG - chr4_4:79395941-79395960 None:intergenic 55.0%
CAGCTCAGGTTCGGCTCATT+TGG - chr4_4:79396885-79396904 None:intergenic 55.0%
TCTTCTTCTCCGACGGCCAT+AGG + chr4_4:79397254-79397273 Msa0706430:intron 55.0%
GAACCGAACTCGTCTGAGCT+CGG - chr4_4:79398039-79398058 None:intergenic 55.0%
GCACCAACTGCTGTCTGTTG+GGG - chr4_4:79399071-79399090 None:intergenic 55.0%
TGTCCAGCTCCATCCCTGAT+TGG - chr4_4:79399918-79399937 None:intergenic 55.0%
GCCAAACTTACGTCCATCCC+TGG + chr4_4:79400334-79400353 Msa0706430:intron 55.0%
CCCAGGGATGGACGTAAGTT+TGG - chr4_4:79400338-79400357 None:intergenic 55.0%
GAGTTGCTGACATTGGACCC+AGG - chr4_4:79400355-79400374 None:intergenic 55.0%
AAGAGGCGGTCATGGAGTTC+TGG - chr4_4:79400686-79400705 None:intergenic 55.0%
CAACGCTGTTCTTCAAGGGG+TGG - chr4_4:79400799-79400818 None:intergenic 55.0%
CCCTCTAGTCATAGCTGGGA+AGG - chr4_4:79400868-79400887 None:intergenic 55.0%
AACCAATCTTGGGCTCCAGG+GGG - chr4_4:79403647-79403666 None:intergenic 55.0%
CAACCAATCTTGGGCTCCAG+GGG - chr4_4:79403648-79403667 None:intergenic 55.0%
CGTTTGCCGATGCAATACCG+TGG + chr4_4:79403722-79403741 Msa0706430:CDS 55.0%
AACACCCCGATCTCTTCCCA+CGG - chr4_4:79403742-79403761 None:intergenic 55.0%
! CGGGGTGTTTGTTGATGAGC+AGG + chr4_4:79403753-79403772 Msa0706430:CDS 55.0%
! TCTCCTGATTGTGCGGGTTG+GGG - chr4_4:79403883-79403902 None:intergenic 55.0%
CATCTCCTGATTGTGCGGGT+TGG - chr4_4:79403885-79403904 None:intergenic 55.0%
CACGGAAGTTGCCACATGAC+AGG + chr4_4:79403932-79403951 Msa0706430:CDS 55.0%
AATTGGACTGCTGGCCCTGT+TGG + chr4_4:79395674-79395693 Msa0706430:intron 55.0%
TTCATAGGGGTCGGTAACCG+AGG + chr4_4:79404094-79404113 Msa0706430:three_prime_UTR 55.0%
CAGACATGCCGACAGCGTGT+TGG - chr4_4:79392995-79393014 None:intergenic 60.0%
TGCTGAATCCCGGGGCTTTC+TGG + chr4_4:79393754-79393773 Msa0706430:intron 60.0%
!! ATCCCGGGGCTTTCTGGCTT+CGG + chr4_4:79393760-79393779 Msa0706430:intron 60.0%
ACTCCGAAGCCAGAAAGCCC+CGG - chr4_4:79393766-79393785 None:intergenic 60.0%
TTGGAACCGAACAGAGGGGG+CGG + chr4_4:79394420-79394439 Msa0706430:intron 60.0%
AATGGTCCGCCCCCTCTGTT+CGG - chr4_4:79394429-79394448 None:intergenic 60.0%
GGGGGCGGACCATTTCTTTG+TGG + chr4_4:79394435-79394454 Msa0706430:intron 60.0%
TCCAAGGGGCCCATCCAAGT+GGG - chr4_4:79395319-79395338 None:intergenic 60.0%
CACGGAAGTTGCCGCATGAC+AGG + chr4_4:79395618-79395637 Msa0706430:intron 60.0%
AGTTCGCGAGCAGCTCGGTT+CGG - chr4_4:79397930-79397949 None:intergenic 60.0%
GAGCCGAGCTCAGACGAGTT+CGG + chr4_4:79398033-79398052 Msa0706430:intron 60.0%
GGTCCAATCAGGGATGGAGC+TGG + chr4_4:79399912-79399931 Msa0706430:intron 60.0%
GCTGACATTGGACCCAGGGA+TGG - chr4_4:79400350-79400369 None:intergenic 60.0%
AATTCCCTGCCCAACCCCAG+TGG + chr4_4:79400650-79400669 Msa0706430:intron 60.0%
GTAACCACTGGGGTTGGGCA+GGG - chr4_4:79400657-79400676 None:intergenic 60.0%
AGTAACCACTGGGGTTGGGC+AGG - chr4_4:79400658-79400677 None:intergenic 60.0%
GAGGGATTCTTCCGCTGCTG+CGG + chr4_4:79402910-79402929 Msa0706430:CDS 60.0%
AGGTGCAAGAGCAGCGGTGT+GGG + chr4_4:79403516-79403535 Msa0706430:CDS 60.0%
TTCCCCCAACCCGCACAATC+AGG + chr4_4:79403877-79403896 Msa0706430:CDS 60.0%
!! CTCCTGATTGTGCGGGTTGG+GGG - chr4_4:79403882-79403901 None:intergenic 60.0%
CTCCGAAGCCAGAAAGCCCC+GGG - chr4_4:79393765-79393784 None:intergenic 65.0%
AAAGCACATCCCCGGGGTCC+TGG + chr4_4:79393885-79393904 Msa0706430:intron 65.0%
CTCCAAGGGGCCCATCCAAG+TGG - chr4_4:79395320-79395339 None:intergenic 65.0%
GGCCCCTTGGAGCCCAAGAT+TGG + chr4_4:79395328-79395347 Msa0706430:intron 65.0%
!! GCAGCTCGGTTCGGCTCGTT+AGG - chr4_4:79397921-79397940 None:intergenic 65.0%
AAGGTAGCACGCCGCAGCAG+CGG - chr4_4:79402924-79402943 None:intergenic 65.0%
GAGGTGCAAGAGCAGCGGTG+TGG + chr4_4:79403515-79403534 Msa0706430:intron 65.0%
TCCAGGGGGCCCATCCAAGT+GGG - chr4_4:79403633-79403652 None:intergenic 65.0%
GGGGCCCATCCAAGTGGGCA+TGG - chr4_4:79395314-79395333 None:intergenic 70.0%
GCCCACTTGGATGGGCCCCT+TGG + chr4_4:79395315-79395334 Msa0706430:intron 70.0%
GCTGCTGCGGCGTGCTACCT+TGG + chr4_4:79402923-79402942 Msa0706430:CDS 70.0%
CTCCAGGGGGCCCATCCAAG+TGG - chr4_4:79403634-79403653 None:intergenic 70.0%
GGCCCCCTGGAGCCCAAGAT+TGG + chr4_4:79403642-79403661 Msa0706430:CDS 70.0%
GCCCACTTGGATGGGCCCCC+TGG + chr4_4:79403629-79403648 Msa0706430:CDS 75.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 79392057 79404754 79392057 ID=Msa0706430;Name=Msa0706430
chr4_4 mRNA 79392057 79404754 79392057 ID=Msa0706430-mRNA-1;Parent=Msa0706430;Name=Msa0706430-mRNA-1;_AED=0.24;_eAED=0.24;_QI=380|1|1|1|0.75|0.6|5|725|416
chr4_4 exon 79392057 79392354 79392057 ID=Msa0706430-mRNA-1:exon:25572;Parent=Msa0706430-mRNA-1
chr4_4 exon 79399350 79399537 79399350 ID=Msa0706430-mRNA-1:exon:25573;Parent=Msa0706430-mRNA-1
chr4_4 exon 79402378 79402766 79402378 ID=Msa0706430-mRNA-1:exon:25574;Parent=Msa0706430-mRNA-1
chr4_4 exon 79402891 79403132 79402891 ID=Msa0706430-mRNA-1:exon:25575;Parent=Msa0706430-mRNA-1
chr4_4 exon 79403516 79404754 79403516 ID=Msa0706430-mRNA-1:exon:25576;Parent=Msa0706430-mRNA-1
chr4_4 five_prime_UTR 79392057 79392354 79392057 ID=Msa0706430-mRNA-1:five_prime_utr;Parent=Msa0706430-mRNA-1
chr4_4 five_prime_UTR 79399350 79399431 79399350 ID=Msa0706430-mRNA-1:five_prime_utr;Parent=Msa0706430-mRNA-1
chr4_4 CDS 79399432 79399537 79399432 ID=Msa0706430-mRNA-1:cds;Parent=Msa0706430-mRNA-1
chr4_4 CDS 79402378 79402766 79402378 ID=Msa0706430-mRNA-1:cds;Parent=Msa0706430-mRNA-1
chr4_4 CDS 79402891 79403132 79402891 ID=Msa0706430-mRNA-1:cds;Parent=Msa0706430-mRNA-1
chr4_4 CDS 79403516 79404029 79403516 ID=Msa0706430-mRNA-1:cds;Parent=Msa0706430-mRNA-1
chr4_4 three_prime_UTR 79404030 79404754 79404030 ID=Msa0706430-mRNA-1:three_prime_utr;Parent=Msa0706430-mRNA-1
Gene Sequence

>Msa0706430

ATGGGTATTTGGAAATTGGGTTTTTTGGGGATCCTTTGTGTTGCTTTTCTCTTTACAATTGATGCTGTTGAGCTTCGTAGGAATCAACCTACTGAAAGAATTTCAGGTAGTGCTGGTGATGTATTGGAAGATGATCCGGTTGGAAGGTTGAAGGTTTTTGTTTATGAGCTTCCAAGCAAGTATAATAAGAAAATTTTGCAAAAGGACCCAAGATGCCTAACCCATATGTTTGCTGCTGAGATCTTTATGCACCGGTTTCTCTTATCTAGCGCTGTCCGAACCCTTAATCCTGAAGAAGCTGATTGGTTTTATACCCCTGTATACACCACCTGTGACTTGACACCAAATGGCCTCCCTTTACCCTTTAAGTCGCCTCGAATGATGAGAAGTGCCATACAACTTATTTCTTCAAATTGGCCTTATTGGAACCGAACAGAGGGAGCCGATCATTTCTTTGTGGTTCCTCATGACTTTGGGGCATGTTTCCATTACCAAGAAGAGAAGGCAATTGAAAGAGGGATTCTTCCGCTGCTGCGGCGTGCTACCTTGGTTCAAACATTTGGGCAGAGGAATCATGTGTGCTTGAAAGATGGCTCAATAACCATTCCTCCATATGCTCCACCACAGAAAATGCATACCCACTTGATTCCTGATAAGACCCCCAGGTCAATTTTTGTGTACTTCCGAGGACTGTTTTATGATGTTGGAAATGACCCTGAAGGTGGTTATTATGCAAGAGGTGCAAGAGCAGCGGTGTGGGAGAACTTTAAGGACAATCCACTATTTGACATTTCGACGGAGCATCCAACAACATATTACGAGGACATGCAACGAGCCGTGTTTTGTCTATGCCCACTTGGATGGGCCCCCTGGAGCCCAAGATTGGTTGAAGCTGTGGTATTTGGTTGCATTCCTGTTATTATTGCCGATGATATTGTTCTACCGTTTGCCGATGCAATACCGTGGGAAGAGATCGGGGTGTTTGTTGATGAGCAGGATGTTCCCAAGTTGGATACCATACTCACATCGATCCCACCAGAAGTTATACTAAGGAAACAAAGATTGCTTGCCAACCCTTCTATGAAGCAAGCAATGTTATTCCCCCAACCCGCACAATCAGGAGATGCCTTCCATCAAGTTCTAAATGGACTTGCACGGAAGTTGCCACATGACAGGAGTGTATTCTTGAAACAAGGGGAGAAGAGCTTGAATTGGACTGCTGGCCCTGTTGGCGACCTTAAACCTTGGTAG
Protein sequence

>Msa0706430

MGIWKLGFLGILCVAFLFTIDAVELRRNQPTERISGSAGDVLEDDPVGRLKVFVYELPSKYNKKILQKDPRCLTHMFAAEIFMHRFLLSSAVRTLNPEEADWFYTPVYTTCDLTPNGLPLPFKSPRMMRSAIQLISSNWPYWNRTEGADHFFVVPHDFGACFHYQEEKAIERGILPLLRRATLVQTFGQRNHVCLKDGSITIPPYAPPQKMHTHLIPDKTPRSIFVYFRGLFYDVGNDPEGGYYARGARAAVWENFKDNPLFDISTEHPTTYYEDMQRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWEEIGVFVDEQDVPKLDTILTSIPPEVILRKQRLLANPSMKQAMLFPQPAQSGDAFHQVLNGLARKLPHDRSVFLKQGEKSLNWTAGPVGDLKPW*