Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0774810 | sp|O65735|ALF_CICAR | 94.150 | 359 | 20 | 1 | 1 | 358 | 1 | 359 | 0.0 | 685 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0774810 | I3SU63 | 99.162 | 358 | 3 | 0 | 1 | 358 | 1 | 358 | 0.0 | 727 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006700 | Msa0774810 | -0.840695 | 7.448227e-58 | -8.615850e-47 |
| Msa0012780 | Msa0774810 | 0.804153 | 2.476305e-49 | -8.615850e-47 |
| Msa0012820 | Msa0774810 | 0.803789 | 2.947598e-49 | -8.615850e-47 |
| Msa0016440 | Msa0774810 | 0.822444 | 2.360859e-53 | -8.615850e-47 |
| Msa0028280 | Msa0774810 | -0.805889 | 1.073280e-49 | -8.615850e-47 |
| Msa0030030 | Msa0774810 | -0.826001 | 3.446779e-54 | -8.615850e-47 |
| Msa0047470 | Msa0774810 | -0.804365 | 2.237414e-49 | -8.615850e-47 |
| Msa0051100 | Msa0774810 | -0.849388 | 3.339040e-60 | -8.615850e-47 |
| Msa0055280 | Msa0774810 | -0.830337 | 3.108843e-55 | -8.615850e-47 |
| Msa0061600 | Msa0774810 | 0.827471 | 1.536385e-54 | -8.615850e-47 |
| Msa0077330 | Msa0774810 | -0.813469 | 2.519178e-51 | -8.615850e-47 |
| Msa0089080 | Msa0774810 | 0.802656 | 5.059250e-49 | -8.615850e-47 |
| Msa0093440 | Msa0774810 | -0.816750 | 4.707107e-52 | -8.615850e-47 |
| Msa0101060 | Msa0774810 | -0.829265 | 5.671727e-55 | -8.615850e-47 |
| Msa0101650 | Msa0774810 | -0.848834 | 4.761747e-60 | -8.615850e-47 |
| Msa0106120 | Msa0774810 | 0.820946 | 5.242979e-53 | -8.615850e-47 |
| Msa0106130 | Msa0774810 | 0.812947 | 3.280926e-51 | -8.615850e-47 |
| Msa0617370 | Msa0774810 | -0.809643 | 1.709453e-50 | -8.615850e-47 |
| Msa0620640 | Msa0774810 | -0.836692 | 8.062135e-57 | -8.615850e-47 |
| Msa0621890 | Msa0774810 | -0.800659 | 1.298928e-48 | -8.615850e-47 |
| Msa0635470 | Msa0774810 | -0.819889 | 9.163070e-53 | -8.615850e-47 |
| Msa0639030 | Msa0774810 | -0.825715 | 4.029372e-54 | -8.615850e-47 |
| Msa0641020 | Msa0774810 | -0.805679 | 1.187932e-49 | -8.615850e-47 |
| Msa0656270 | Msa0774810 | -0.824232 | 9.023168e-54 | -8.615850e-47 |
| Msa0660880 | Msa0774810 | 0.839034 | 2.017099e-57 | -8.615850e-47 |
| Msa0663330 | Msa0774810 | -0.841224 | 5.409468e-58 | -8.615850e-47 |
| Msa0664020 | Msa0774810 | -0.836257 | 1.040393e-56 | -8.615850e-47 |
| Msa0669990 | Msa0774810 | -0.805140 | 1.541229e-49 | -8.615850e-47 |
| Msa0678240 | Msa0774810 | -0.801170 | 1.021661e-48 | -8.615850e-47 |
| Msa0697600 | Msa0774810 | -0.826438 | 2.712624e-54 | -8.615850e-47 |
| Msa0700070 | Msa0774810 | -0.817665 | 2.930956e-52 | -8.615850e-47 |
| Msa0706430 | Msa0774810 | 0.800452 | 1.432014e-48 | -8.615850e-47 |
| Msa0709820 | Msa0774810 | 0.805769 | 1.137344e-49 | -8.615850e-47 |
| Msa0716740 | Msa0774810 | 0.829515 | 4.930860e-55 | -8.615850e-47 |
| Msa0722930 | Msa0774810 | -0.828690 | 7.814555e-55 | -8.615850e-47 |
| Msa0723140 | Msa0774810 | -0.822134 | 2.785995e-53 | -8.615850e-47 |
| Msa0731710 | Msa0774810 | -0.819344 | 1.220378e-52 | -8.615850e-47 |
| Msa0733670 | Msa0774810 | 0.898983 | 3.106861e-77 | -8.615850e-47 |
| Msa0736500 | Msa0774810 | 0.814689 | 1.355966e-51 | -8.615850e-47 |
| Msa0752580 | Msa0774810 | -0.803592 | 3.238371e-49 | -8.615850e-47 |
| Msa0757990 | Msa0774810 | 0.821173 | 4.646582e-53 | -8.615850e-47 |
| Msa0771960 | Msa0774810 | -0.815597 | 8.522762e-52 | -8.615850e-47 |
| Msa0774810 | Msa0782030 | -0.817346 | 3.459244e-52 | -8.615850e-47 |
| Msa0774810 | Msa0797620 | -0.807288 | 5.438327e-50 | -8.615850e-47 |
| Msa0774810 | Msa0799290 | 0.834463 | 2.953738e-56 | -8.615850e-47 |
| Msa0774810 | Msa0812330 | 0.881656 | 2.001562e-70 | -8.615850e-47 |
| Msa0774810 | Msa0815950 | -0.808388 | 3.174848e-50 | -8.615850e-47 |
| Msa0774810 | Msa0837510 | 0.834845 | 2.368182e-56 | -8.615850e-47 |
| Msa0774810 | Msa0843280 | -0.823287 | 1.502625e-53 | -8.615850e-47 |
| Msa0774810 | Msa0861560 | -0.808541 | 2.944013e-50 | -8.615850e-47 |
| Msa0774810 | Msa0867810 | -0.810023 | 1.416461e-50 | -8.615850e-47 |
| Msa0774810 | Msa0883390 | -0.808835 | 2.547854e-50 | -8.615850e-47 |
| Msa0774810 | Msa0883410 | -0.812210 | 4.754027e-51 | -8.615850e-47 |
| Msa0774810 | Msa0883430 | -0.809769 | 1.606653e-50 | -8.615850e-47 |
| Msa0774810 | Msa0883660 | -0.805209 | 1.491088e-49 | -8.615850e-47 |
| Msa0774810 | Msa0883670 | -0.839214 | 1.811966e-57 | -8.615850e-47 |
| Msa0774810 | Msa0887000 | -0.813977 | 1.947369e-51 | -8.615850e-47 |
| Msa0774810 | Msa0887070 | -0.800172 | 1.632871e-48 | -8.615850e-47 |
| Msa0774810 | Msa0903730 | -0.801570 | 8.461827e-49 | -8.615850e-47 |
| Msa0774810 | Msa0919520 | -0.809606 | 1.741611e-50 | -8.615850e-47 |
| Msa0774810 | Msa0926800 | -0.803222 | 3.864083e-49 | -8.615850e-47 |
| Msa0774810 | Msa0934830 | -0.810933 | 9.009582e-51 | -8.615850e-47 |
| Msa0774810 | Msa0934940 | 0.832752 | 7.902499e-56 | -8.615850e-47 |
| Msa0774810 | Msa0950410 | -0.803343 | 3.647125e-49 | -8.615850e-47 |
| Msa0774810 | Msa0951720 | -0.825963 | 3.519134e-54 | -8.615850e-47 |
| Msa0774810 | Msa0961420 | 0.804013 | 2.647794e-49 | -8.615850e-47 |
| Msa0774810 | Msa0964680 | -0.807327 | 5.335332e-50 | -8.615850e-47 |
| Msa0774810 | Msa0965520 | -0.830366 | 3.057739e-55 | -8.615850e-47 |
| Msa0774810 | Msa0972090 | 0.802584 | 5.234725e-49 | -8.615850e-47 |
| Msa0774810 | Msa0973230 | -0.800153 | 1.647528e-48 | -8.615850e-47 |
| Msa0774810 | Msa0984840 | -0.827733 | 1.329333e-54 | -8.615850e-47 |
| Msa0774810 | Msa0984850 | -0.813600 | 2.358413e-51 | -8.615850e-47 |
| Msa0774810 | Msa1008340 | -0.802577 | 5.252902e-49 | -8.615850e-47 |
| Msa0774810 | Msa1011320 | 0.818365 | 2.036751e-52 | -8.615850e-47 |
| Msa0774810 | Msa1011350 | 0.815212 | 1.037916e-51 | -8.615850e-47 |
| Msa0774810 | Msa1016110 | -0.812476 | 4.159900e-51 | -8.615850e-47 |
| Msa0774810 | Msa1026730 | 0.844492 | 7.309829e-59 | -8.615850e-47 |
| Msa0774810 | Msa1032350 | -0.804064 | 2.583907e-49 | -8.615850e-47 |
| Msa0774810 | Msa1040730 | 0.829403 | 5.249993e-55 | -8.615850e-47 |
| Msa0774810 | Msa1041550 | -0.820879 | 5.432473e-53 | -8.615850e-47 |
| Msa0774810 | Msa1049950 | -0.820720 | 5.908745e-53 | -8.615850e-47 |
| Msa0774810 | Msa1072350 | -0.800140 | 1.657327e-48 | -8.615850e-47 |
| Msa0774810 | Msa1081530 | -0.821016 | 5.051881e-53 | -8.615850e-47 |
| Msa0774810 | Msa1120620 | -0.830428 | 2.952803e-55 | -8.615850e-47 |
| Msa0774810 | Msa1141250 | 0.809230 | 2.096822e-50 | -8.615850e-47 |
| Msa0774810 | Msa1142850 | 0.808432 | 3.106927e-50 | -8.615850e-47 |
| Msa0774810 | Msa1142860 | 0.814960 | 1.180474e-51 | -8.615850e-47 |
| Msa0774810 | Msa1157020 | -0.826682 | 2.372700e-54 | -8.615850e-47 |
| Msa0774810 | Msa1166450 | -0.814966 | 1.176993e-51 | -8.615850e-47 |
| Msa0774810 | Msa1166970 | -0.819735 | 9.934747e-53 | -8.615850e-47 |
| Msa0774810 | Msa1182830 | -0.802203 | 6.272150e-49 | -8.615850e-47 |
| Msa0774810 | Msa1184580 | -0.802278 | 6.052413e-49 | -8.615850e-47 |
| Msa0774810 | Msa1191390 | -0.825560 | 4.386204e-54 | -8.615850e-47 |
| Msa0774810 | Msa1204160 | 0.812658 | 3.794315e-51 | -8.615850e-47 |
| Msa0774810 | Msa1204190 | 0.807620 | 4.625381e-50 | -8.615850e-47 |
| Msa0774810 | Msa1207460 | 0.805392 | 1.364526e-49 | -8.615850e-47 |
| Msa0774810 | Msa1207480 | 0.805210 | 1.490105e-49 | -8.615850e-47 |
| Msa0774810 | Msa1211390 | -0.821513 | 3.878770e-53 | -8.615850e-47 |
| Msa0774810 | Msa1219780 | 0.801569 | 8.465048e-49 | -8.615850e-47 |
| Msa0774810 | Msa1222030 | 0.817277 | 3.585085e-52 | -8.615850e-47 |
| Msa0774810 | Msa1228160 | 0.833260 | 5.904969e-56 | -8.615850e-47 |
| Msa0774810 | Msa1235770 | -0.802918 | 4.467047e-49 | -8.615850e-47 |
| Msa0774810 | Msa1237260 | -0.857193 | 1.927739e-62 | -8.615850e-47 |
| Msa0774810 | Msa1242990 | -0.816152 | 6.408139e-52 | -8.615850e-47 |
| Msa0774810 | Msa1257640 | 0.823903 | 1.078139e-53 | -8.615850e-47 |
| Msa0774810 | Msa1271170 | 0.821371 | 4.183415e-53 | -8.615850e-47 |
| Msa0774810 | Msa1272130 | -0.825608 | 4.272273e-54 | -8.615850e-47 |
| Msa0774810 | Msa1279860 | -0.804173 | 2.452521e-49 | -8.615850e-47 |
| Msa0774810 | Msa1279870 | -0.815660 | 8.251822e-52 | -8.615850e-47 |
| Msa0774810 | Msa1284390 | -0.816807 | 4.571571e-52 | -8.615850e-47 |
| Msa0774810 | Msa1306700 | -0.801440 | 8.994122e-49 | -8.615850e-47 |
| Msa0774810 | Msa1317710 | -0.815710 | 8.039350e-52 | -8.615850e-47 |
| Msa0774810 | Msa1328600 | -0.808741 | 2.667853e-50 | -8.615850e-47 |
| Msa0774810 | Msa1335970 | 0.846280 | 2.399170e-59 | -8.615850e-47 |
| Msa0774810 | Msa1357720 | -0.846700 | 1.841641e-59 | -8.615850e-47 |
| Msa0774810 | Msa1360380 | -0.828843 | 7.177716e-55 | -8.615850e-47 |
| Msa0774810 | Msa1370930 | 0.812559 | 3.989444e-51 | -8.615850e-47 |
| Msa0774810 | Msa1380490 | 0.803533 | 3.331018e-49 | -8.615850e-47 |
| Msa0774810 | Msa1384980 | -0.800235 | 1.585086e-48 | -8.615850e-47 |
| Msa0774810 | Msa1386520 | -0.805153 | 1.531679e-49 | -8.615850e-47 |
| Msa0774810 | Msa1405470 | -0.845128 | 4.925518e-59 | -8.615850e-47 |
| Msa0774810 | Msa1407210 | 0.803285 | 3.749141e-49 | -8.615850e-47 |
| Msa0774810 | Msa1428440 | -0.820043 | 8.447791e-53 | -8.615850e-47 |
| Msa0774810 | Msa1440180 | -0.815255 | 1.015106e-51 | -8.615850e-47 |
| Msa0774810 | Msa1445250 | -0.801544 | 8.562780e-49 | -8.615850e-47 |
| Msa0774810 | Msa1449740 | -0.813423 | 2.579353e-51 | -8.615850e-47 |
| Msa0774810 | Msa1452200 | -0.805879 | 1.078804e-49 | -8.615850e-47 |
| Msa0774810 | Msa1460310 | 0.831904 | 1.281233e-55 | -8.615850e-47 |
| Msa0153440 | Msa0774810 | -0.826315 | 2.902155e-54 | -8.615850e-47 |
| Msa0169960 | Msa0774810 | -0.829830 | 4.131803e-55 | -8.615850e-47 |
| Msa0197750 | Msa0774810 | 0.813241 | 2.827378e-51 | -8.615850e-47 |
| Msa0212210 | Msa0774810 | -0.805069 | 1.594915e-49 | -8.615850e-47 |
| Msa0222720 | Msa0774810 | -0.801028 | 1.092144e-48 | -8.615850e-47 |
| Msa0223100 | Msa0774810 | -0.813274 | 2.781264e-51 | -8.615850e-47 |
| Msa0223290 | Msa0774810 | -0.804487 | 2.110006e-49 | -8.615850e-47 |
| Msa0223380 | Msa0774810 | -0.810503 | 1.115791e-50 | -8.615850e-47 |
| Msa0231860 | Msa0774810 | 0.803559 | 3.290773e-49 | -8.615850e-47 |
| Msa0379500 | Msa0774810 | -0.802076 | 6.660255e-49 | -8.615850e-47 |
| Msa0379540 | Msa0774810 | -0.802200 | 6.280940e-49 | -8.615850e-47 |
| Msa0379820 | Msa0774810 | -0.810185 | 1.307192e-50 | -8.615850e-47 |
| Msa0404220 | Msa0774810 | -0.802895 | 4.515263e-49 | -8.615850e-47 |
| Msa0411000 | Msa0774810 | -0.820100 | 8.197535e-53 | -8.615850e-47 |
| Msa0414070 | Msa0774810 | -0.827050 | 1.937272e-54 | -8.615850e-47 |
| Msa0419620 | Msa0774810 | 0.811706 | 6.121663e-51 | -8.615850e-47 |
| Msa0423600 | Msa0774810 | -0.803096 | 4.104207e-49 | -8.615850e-47 |
| Msa0431520 | Msa0774810 | -0.805930 | 1.052273e-49 | -8.615850e-47 |
| Msa0431830 | Msa0774810 | -0.801907 | 7.213578e-49 | -8.615850e-47 |
| Msa0434890 | Msa0774810 | 0.811737 | 6.027588e-51 | -8.615850e-47 |
| Msa0454940 | Msa0774810 | -0.817854 | 2.657579e-52 | -8.615850e-47 |
| Msa0455230 | Msa0774810 | -0.801251 | 9.832197e-49 | -8.615850e-47 |
| Msa0459120 | Msa0774810 | -0.837454 | 5.149291e-57 | -8.615850e-47 |
| Msa0256430 | Msa0774810 | -0.854568 | 1.128768e-61 | -8.615850e-47 |
| Msa0264020 | Msa0774810 | -0.801471 | 8.864692e-49 | -8.615850e-47 |
| Msa0264940 | Msa0774810 | 0.829932 | 3.903502e-55 | -8.615850e-47 |
| Msa0265210 | Msa0774810 | -0.807431 | 5.071147e-50 | -8.615850e-47 |
| Msa0277280 | Msa0774810 | 0.811058 | 8.464118e-51 | -8.615850e-47 |
| Msa0302990 | Msa0774810 | 0.832587 | 8.683739e-56 | -8.615850e-47 |
| Msa0311330 | Msa0774810 | -0.803878 | 2.824903e-49 | -8.615850e-47 |
| Msa0329550 | Msa0774810 | -0.809028 | 2.317155e-50 | -8.615850e-47 |
| Msa0339560 | Msa0774810 | -0.808318 | 3.284832e-50 | -8.615850e-47 |
| Msa0362430 | Msa0774810 | -0.807517 | 4.862783e-50 | -8.615850e-47 |
| Msa0363460 | Msa0774810 | -0.800024 | 1.750085e-48 | -8.615850e-47 |
| Msa0502910 | Msa0774810 | -0.803626 | 3.186170e-49 | -8.615850e-47 |
| Msa0505660 | Msa0774810 | -0.838574 | 2.652692e-57 | -8.615850e-47 |
| Msa0589610 | Msa0774810 | -0.801418 | 9.090731e-49 | -8.615850e-47 |
| Msa0598250 | Msa0774810 | -0.801045 | 1.083782e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0774810 | MtrunA17_Chr5g0429051 | 99.162 | 358 | 3 | 0 | 1 | 358 | 1 | 358 | 0.0 | 727 |
| Msa0774810 | MtrunA17_Chr1g0179211 | 87.430 | 358 | 45 | 0 | 1 | 358 | 1 | 358 | 0.0 | 647 |
| Msa0774810 | MtrunA17_Chr7g0265821 | 85.754 | 358 | 51 | 0 | 1 | 358 | 1 | 358 | 0.0 | 643 |
| Msa0774810 | MtrunA17_Chr5g0447091 | 78.212 | 358 | 77 | 1 | 1 | 358 | 1 | 357 | 0.0 | 566 |
| Msa0774810 | MtrunA17_Chr5g0429031 | 94.313 | 211 | 12 | 0 | 1 | 211 | 42 | 252 | 9.13e-145 | 409 |
| Msa0774810 | MtrunA17_Chr4g0035951 | 56.818 | 352 | 147 | 4 | 8 | 358 | 53 | 400 | 3.19e-135 | 391 |
| Msa0774810 | MtrunA17_Chr4g0028361 | 56.818 | 352 | 147 | 4 | 8 | 358 | 53 | 400 | 3.36e-135 | 391 |
| Msa0774810 | MtrunA17_Chr1g0208981 | 54.213 | 356 | 158 | 4 | 4 | 358 | 40 | 391 | 5.15e-133 | 385 |
| Msa0774810 | MtrunA17_Chr5g0429021 | 97.710 | 131 | 3 | 0 | 228 | 358 | 1 | 131 | 2.30e-86 | 256 |
| Msa0774810 | MtrunA17_Chr4g0035981 | 54.393 | 239 | 104 | 4 | 121 | 358 | 6 | 240 | 1.93e-82 | 251 |
| Msa0774810 | MtrunA17_Chr7g0265811 | 67.708 | 96 | 6 | 1 | 112 | 207 | 21 | 91 | 4.51e-36 | 126 |
| Msa0774810 | MtrunA17_Chr4g0035971 | 59.091 | 88 | 36 | 0 | 8 | 95 | 51 | 138 | 3.38e-27 | 104 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0774810 | AT3G52930.1 | 88.268 | 358 | 42 | 0 | 1 | 358 | 1 | 358 | 0.0 | 652 |
| Msa0774810 | AT2G36460.1 | 86.592 | 358 | 48 | 0 | 1 | 358 | 1 | 358 | 0.0 | 640 |
| Msa0774810 | AT5G03690.2 | 86.351 | 359 | 48 | 1 | 1 | 358 | 1 | 359 | 0.0 | 618 |
| Msa0774810 | AT5G03690.1 | 86.819 | 349 | 45 | 1 | 11 | 358 | 45 | 393 | 0.0 | 603 |
| Msa0774810 | AT4G26530.1 | 76.536 | 358 | 84 | 0 | 1 | 358 | 1 | 358 | 0.0 | 564 |
| Msa0774810 | AT4G26530.3 | 76.536 | 358 | 84 | 0 | 1 | 358 | 1 | 358 | 0.0 | 564 |
| Msa0774810 | AT4G26530.2 | 76.536 | 358 | 84 | 0 | 1 | 358 | 1 | 358 | 0.0 | 564 |
| Msa0774810 | AT4G26520.1 | 71.229 | 358 | 103 | 0 | 1 | 358 | 1 | 358 | 0.0 | 518 |
| Msa0774810 | AT4G26520.3 | 71.348 | 356 | 102 | 0 | 1 | 356 | 1 | 356 | 0.0 | 514 |
| Msa0774810 | AT4G26520.2 | 71.347 | 349 | 100 | 0 | 10 | 358 | 7 | 355 | 0.0 | 506 |
| Msa0774810 | AT4G26520.4 | 71.347 | 349 | 100 | 0 | 10 | 358 | 7 | 355 | 0.0 | 506 |
| Msa0774810 | AT2G36460.3 | 87.266 | 267 | 34 | 0 | 92 | 358 | 1 | 267 | 1.41e-174 | 486 |
| Msa0774810 | AT2G36460.2 | 87.266 | 267 | 34 | 0 | 92 | 358 | 1 | 267 | 1.41e-174 | 486 |
| Msa0774810 | AT5G03690.3 | 86.517 | 267 | 35 | 1 | 93 | 358 | 1 | 267 | 4.04e-163 | 457 |
| Msa0774810 | AT5G03690.4 | 86.517 | 267 | 35 | 1 | 93 | 358 | 1 | 267 | 4.04e-163 | 457 |
| Msa0774810 | AT2G21330.1 | 57.062 | 354 | 147 | 4 | 6 | 358 | 50 | 399 | 4.40e-136 | 393 |
| Msa0774810 | AT4G38970.1 | 56.780 | 354 | 148 | 4 | 6 | 358 | 49 | 398 | 4.45e-136 | 393 |
| Msa0774810 | AT2G01140.1 | 55.398 | 352 | 152 | 4 | 8 | 358 | 44 | 391 | 4.35e-133 | 385 |
| Msa0774810 | AT2G21330.3 | 55.085 | 354 | 144 | 5 | 6 | 358 | 50 | 389 | 3.71e-127 | 370 |
| Msa0774810 | AT4G38970.2 | 56.757 | 259 | 110 | 2 | 6 | 263 | 49 | 306 | 8.29e-98 | 295 |
| Msa0774810 | AT2G21330.2 | 55.985 | 259 | 112 | 2 | 6 | 263 | 50 | 307 | 5.93e-97 | 290 |
Find 143 sgRNAs with CRISPR-Local
Find 194 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCGATTTCGGATTAATTT+AGG | 0.174132 | 5_2:+51336701 | None:intergenic |
| TGGACCCTTTCCTTCTCTTT+TGG | 0.209134 | 5_2:-51337170 | Msa0774810:CDS |
| TGAGAAATAAAGTGAGGTTT+TGG | 0.257019 | 5_2:+51339230 | None:intergenic |
| CTTACCCTTCACTTGGTTGA+TGG | 0.266236 | 5_2:+51337199 | None:intergenic |
| TGATCGAGGTAGGTTTGTTT+TGG | 0.314472 | 5_2:+51339161 | None:intergenic |
| AACGAAGCTGGTGTGCTTCC+TGG | 0.322802 | 5_2:-51337758 | Msa0774810:CDS |
| GTTAAAACAACATTCGATTT+CGG | 0.324429 | 5_2:+51336690 | None:intergenic |
| AAGAGGGTAGGTTAAGAATA+AGG | 0.334430 | 5_2:+51339196 | None:intergenic |
| CAGGTGCACGTTTCGCTAAA+TGG | 0.343443 | 5_2:-51337631 | Msa0774810:CDS |
| GAGTGCTCAGATGGCTCATT+GGG | 0.370466 | 5_2:+51337587 | None:intergenic |
| ACCACCACTCAGGGTCTTGA+TGG | 0.384125 | 5_2:-51337686 | Msa0774810:CDS |
| TAGACGCTTTCCAATTGTTC+CGG | 0.385779 | 5_2:+51338523 | None:intergenic |
| ACCTTTGGTGCATCAGATCC+AGG | 0.397934 | 5_2:+51337347 | None:intergenic |
| AATTTCAGGTTCAGTGTACT+TGG | 0.398447 | 5_2:-51336824 | Msa0774810:three_prime_UTR |
| GCTTCAAGAGAGTGCCTTCA+AGG | 0.401651 | 5_2:+51337384 | None:intergenic |
| GATGAGTCAACCGGAACAAT+TGG | 0.403195 | 5_2:-51338533 | Msa0774810:CDS |
| GGTGGTTTCTCCATCAGTTC+CGG | 0.405974 | 5_2:+51337703 | None:intergenic |
| GAGCCTGAGATCCTTGTTGA+TGG | 0.408703 | 5_2:-51337491 | Msa0774810:CDS |
| ACAACCTCGGGTGCAACCTT+TGG | 0.418995 | 5_2:+51337332 | None:intergenic |
| GGTGTCCTTCAGTACCTTAG+TGG | 0.421088 | 5_2:-51338431 | Msa0774810:CDS |
| AGCAGCAAGAATACCCTTGC+CGG | 0.424830 | 5_2:+51338556 | None:intergenic |
| AAGGGTACCGTTGAGCTTGC+CGG | 0.426023 | 5_2:-51337722 | Msa0774810:CDS |
| GATCCAGGGGTAACCATGTT+AGG | 0.432972 | 5_2:+51337362 | None:intergenic |
| CTGCAGCGGTGCTTTGGTAG+AGG | 0.433294 | 5_2:+51338387 | None:intergenic |
| GGGTAGGTTAAGAATAAGGT+AGG | 0.436283 | 5_2:+51339200 | None:intergenic |
| GACCACCATGTCCTCCTTGA+AGG | 0.437194 | 5_2:-51337398 | Msa0774810:CDS |
| ATATAGTGATTATGATGGAT+TGG | 0.437581 | 5_2:+51339259 | None:intergenic |
| AGTACCCTCAAGGCATGGTC+TGG | 0.442363 | 5_2:-51337131 | Msa0774810:CDS |
| TTGGCATATGACTGCATATC+GGG | 0.442827 | 5_2:+51337538 | None:intergenic |
| TAGTGGAGTCATCCTCTTTG+AGG | 0.444154 | 5_2:-51338414 | Msa0774810:CDS |
| AGCTGGGACTGCGGCAGGTA+CGG | 0.452758 | 5_2:+51337277 | None:intergenic |
| TTTATATATAGTGATTATGA+TGG | 0.454462 | 5_2:+51339254 | None:intergenic |
| AGGATCTCAGGCTCAACAAT+TGG | 0.457558 | 5_2:+51337500 | None:intergenic |
| AGAGTGCTCAGATGGCTCAT+TGG | 0.465315 | 5_2:+51337586 | None:intergenic |
| CCATGAGAATGCCTATGGTT+TGG | 0.465357 | 5_2:-51337561 | Msa0774810:CDS |
| GCTAATTCTGAGGCTACTCT+TGG | 0.466145 | 5_2:-51337056 | Msa0774810:CDS |
| CTCAAGAAGCTTTGTTGACA+AGG | 0.466664 | 5_2:-51337085 | Msa0774810:CDS |
| TATAGTGATTATGATGGATT+GGG | 0.466756 | 5_2:+51339260 | None:intergenic |
| TGGCGTGCAGTGCTTAAAAT+CGG | 0.467744 | 5_2:-51337611 | Msa0774810:CDS |
| CTTGGTCCAACCCGAGCTAA+AGG | 0.468746 | 5_2:-51336806 | Msa0774810:three_prime_UTR |
| GAGGACATGGTGGTCATTCA+AGG | 0.470656 | 5_2:+51337406 | None:intergenic |
| ATGGCTTCTTACCCTTCACT+TGG | 0.473021 | 5_2:+51337192 | None:intergenic |
| CTCTACCAAAGCACCGCTGC+AGG | 0.473908 | 5_2:-51338386 | Msa0774810:intron |
| CCAGACAAGAAAACAACAGC+TGG | 0.481066 | 5_2:+51337260 | None:intergenic |
| AAGTACCTGCAGCGGTGCTT+TGG | 0.482170 | 5_2:+51338381 | None:intergenic |
| CTTGCCGGGTGTGCCGATGT+AGG | 0.484543 | 5_2:+51338571 | None:intergenic |
| TACAAGGGTAACTCTAAACT+TGG | 0.485439 | 5_2:-51337029 | Msa0774810:CDS |
| GTGTGCTCAGCAACAACCTC+GGG | 0.487306 | 5_2:+51337320 | None:intergenic |
| AGCTTTGTTGACAAGGGCTA+AGG | 0.490730 | 5_2:-51337078 | Msa0774810:CDS |
| TTTATAATAACCCTTTAGCT+CGG | 0.494818 | 5_2:+51336795 | None:intergenic |
| TGCAGCGGTGCTTTGGTAGA+GGG | 0.495649 | 5_2:+51338388 | None:intergenic |
| TTGGTACAAGTCCATTCTCT+TGG | 0.496399 | 5_2:+51337519 | None:intergenic |
| TTATAATAACCCTTTAGCTC+GGG | 0.498924 | 5_2:+51336796 | None:intergenic |
| GTTGATGTCTTGAACGAAGC+TGG | 0.500977 | 5_2:-51337770 | Msa0774810:CDS |
| GCTGCCTACATCGGCACACC+CGG | 0.503985 | 5_2:-51338575 | Msa0774810:CDS |
| CTTGCTGCTGATGAGTCAAC+CGG | 0.504792 | 5_2:-51338542 | Msa0774810:CDS |
| CTTGGCATATGACTGCATAT+CGG | 0.504914 | 5_2:+51337537 | None:intergenic |
| TGCGAGACAGAATAATTGCT+TGG | 0.506543 | 5_2:-51336882 | Msa0774810:three_prime_UTR |
| TGTGCCGATGTAGGCAGCAT+TGG | 0.506890 | 5_2:+51338580 | None:intergenic |
| GTTGAGCTTGCCGGAACTGA+TGG | 0.507933 | 5_2:-51337713 | Msa0774810:CDS |
| GGTCCATCAACAAGGATCTC+AGG | 0.508887 | 5_2:+51337488 | None:intergenic |
| TGGTGTGCTTCCTGGTATCA+AGG | 0.513204 | 5_2:-51337750 | Msa0774810:CDS |
| CCCTTGTCAACCTTGATACC+AGG | 0.513576 | 5_2:+51337740 | None:intergenic |
| GCAGTCATATGCCAAGAGAA+TGG | 0.513764 | 5_2:-51337530 | Msa0774810:CDS |
| CCCTTCCAAAAGAGAAGGAA+AGG | 0.518782 | 5_2:+51337165 | None:intergenic |
| AATAACCCTTTAGCTCGGGT+TGG | 0.519996 | 5_2:+51336800 | None:intergenic |
| TTGGTCCAACCCGAGCTAAA+GGG | 0.520195 | 5_2:-51336805 | Msa0774810:three_prime_UTR |
| ACAACAGCTGGGACTGCGGC+AGG | 0.520425 | 5_2:+51337272 | None:intergenic |
| TGTCCTTGCAGCATGCTACA+AGG | 0.521812 | 5_2:-51337429 | Msa0774810:CDS |
| CCCTGGATCTGATGCACCAA+AGG | 0.525088 | 5_2:-51337348 | Msa0774810:CDS |
| CTACATCGGCACACCCGGCA+AGG | 0.526541 | 5_2:-51338570 | Msa0774810:CDS |
| CTAAGGTACTGAAGGACACC+AGG | 0.526807 | 5_2:+51338434 | None:intergenic |
| TCGTTCAAGACATCAACAAA+AGG | 0.529185 | 5_2:+51337776 | None:intergenic |
| TGGTGGACAGAGTGAGGAAG+AGG | 0.529702 | 5_2:-51337240 | Msa0774810:CDS |
| TCTATCCATGAGAATGCCTA+TGG | 0.529948 | 5_2:-51337566 | Msa0774810:CDS |
| TCACTTGGTTGATGGCATTG+AGG | 0.532962 | 5_2:+51337207 | None:intergenic |
| GGCTACTCTTGGAACTTACA+AGG | 0.533473 | 5_2:-51337045 | Msa0774810:CDS |
| TTCACGGAGAGCACGTCTGT+TGG | 0.535839 | 5_2:+51338472 | None:intergenic |
| ATTGCCAATGCTGCCTACAT+CGG | 0.536003 | 5_2:-51338584 | Msa0774810:CDS |
| GGTAACTCTAAACTTGGTGC+TGG | 0.539715 | 5_2:-51337023 | Msa0774810:CDS |
| AAGCCTAACATGGTTACCCC+TGG | 0.543234 | 5_2:-51337365 | Msa0774810:CDS |
| GGTAGGTTAAGAATAAGGTA+GGG | 0.544916 | 5_2:+51339201 | None:intergenic |
| CACTCTCTTGAAGCCTAACA+TGG | 0.547031 | 5_2:-51337375 | Msa0774810:CDS |
| CCAAACCATAGGCATTCTCA+TGG | 0.550708 | 5_2:+51337561 | None:intergenic |
| GATTTCGGATTAATTTAGGA+TGG | 0.552335 | 5_2:+51336705 | None:intergenic |
| ATTTCGGATTAATTTAGGAT+GGG | 0.553743 | 5_2:+51336706 | None:intergenic |
| AAAGAGAAGGAAAGGGTCCA+TGG | 0.554272 | 5_2:+51337173 | None:intergenic |
| AAGTGAAGGGTAAGAAGCCA+TGG | 0.558340 | 5_2:-51337190 | Msa0774810:CDS |
| TGTGCTAAGTACTATGAAGC+AGG | 0.559793 | 5_2:-51337650 | Msa0774810:CDS |
| TCCTGGTATCAAGGTTGACA+AGG | 0.560548 | 5_2:-51337741 | Msa0774810:CDS |
| GCAGCAAGAATACCCTTGCC+GGG | 0.561946 | 5_2:+51338557 | None:intergenic |
| AAGTTCGACATGATCGAGGT+AGG | 0.562374 | 5_2:+51339151 | None:intergenic |
| ACTCAGGGTCTTGATGGACT+TGG | 0.562479 | 5_2:-51337680 | Msa0774810:CDS |
| CTTGTCTGGTGGACAGAGTG+AGG | 0.562758 | 5_2:-51337246 | Msa0774810:CDS |
| CTCAGAGAGTCTTCATGTGA+AGG | 0.562837 | 5_2:-51336997 | Msa0774810:CDS |
| GGGCGGTGAAAAGAAGTTCA+CGG | 0.569226 | 5_2:+51338456 | None:intergenic |
| TGATGGAGAAACCACCACTC+AGG | 0.570496 | 5_2:-51337696 | Msa0774810:CDS |
| GATGGCATTGAGGTTGACAC+TGG | 0.575533 | 5_2:+51337217 | None:intergenic |
| GGTAGAGGGTTTCCTCAAAG+AGG | 0.575881 | 5_2:+51338402 | None:intergenic |
| GAAAACAACAGCTGGGACTG+CGG | 0.579869 | 5_2:+51337268 | None:intergenic |
| TACATCGGCACACCCGGCAA+GGG | 0.581098 | 5_2:-51338569 | Msa0774810:CDS |
| TCATGGATAGAGTGCTCAGA+TGG | 0.581969 | 5_2:+51337578 | None:intergenic |
| CCTTTGGTGCATCAGATCCA+GGG | 0.582593 | 5_2:+51337348 | None:intergenic |
| GATGGAGAAACCACCACTCA+GGG | 0.584183 | 5_2:-51337695 | Msa0774810:CDS |
| CAATGCCATCAACCAAGTGA+AGG | 0.584291 | 5_2:-51337204 | Msa0774810:CDS |
| ATCAGTTCCGGCAAGCTCAA+CGG | 0.584893 | 5_2:+51337715 | None:intergenic |
| GAGTGCCTTCAAGGAGGACA+TGG | 0.586352 | 5_2:+51337393 | None:intergenic |
| TGCACCAAAGGTTGCACCCG+AGG | 0.589398 | 5_2:-51337336 | Msa0774810:CDS |
| AGAGAGTGAGAAATAAAGTG+AGG | 0.589814 | 5_2:+51339224 | None:intergenic |
| CAAAGAGGATGACTCCACTA+AGG | 0.590051 | 5_2:+51338417 | None:intergenic |
| AAGTATTGATGAGTCAAAGT+TGG | 0.592391 | 5_2:-51336969 | Msa0774810:exon |
| TGACTCCACTAAGGTACTGA+AGG | 0.592512 | 5_2:+51338426 | None:intergenic |
| GCATGCTGCAAGGACACGCT+CGG | 0.593245 | 5_2:+51337436 | None:intergenic |
| TGCATATCGGGCCAAACCAT+AGG | 0.596299 | 5_2:+51337550 | None:intergenic |
| AAGTGCCCTTCCAAAAGAGA+AGG | 0.603752 | 5_2:+51337160 | None:intergenic |
| AACAGAGTACCCTCAAGGCA+TGG | 0.603839 | 5_2:-51337136 | Msa0774810:CDS |
| AATGCCATCAACCAAGTGAA+GGG | 0.616498 | 5_2:-51337203 | Msa0774810:CDS |
| CCTTCCAAAAGAGAAGGAAA+GGG | 0.621042 | 5_2:+51337166 | None:intergenic |
| TCCATCAAGACCCTGAGTGG+TGG | 0.624702 | 5_2:+51337685 | None:intergenic |
| AGGCCTTGTAGCATGCTGCA+AGG | 0.628730 | 5_2:+51337426 | None:intergenic |
| TGTCATGAGGTCCATCAACA+AGG | 0.633917 | 5_2:+51337480 | None:intergenic |
| AGTGTGCTCAGCAACAACCT+CGG | 0.636805 | 5_2:+51337319 | None:intergenic |
| TGCCTTCAAGGAGGACATGG+TGG | 0.637134 | 5_2:+51337396 | None:intergenic |
| TCAAGAAGCTTTGTTGACAA+GGG | 0.640371 | 5_2:-51337084 | Msa0774810:CDS |
| CAGACAAGAAAACAACAGCT+GGG | 0.641298 | 5_2:+51337261 | None:intergenic |
| AAGGGCTAAGGCTAATTCTG+AGG | 0.650952 | 5_2:-51337066 | Msa0774810:CDS |
| CTTTGGTGCATCAGATCCAG+GGG | 0.655083 | 5_2:+51337349 | None:intergenic |
| AAGTCCATCAAGACCCTGAG+TGG | 0.657276 | 5_2:+51337682 | None:intergenic |
| GCTACTCTTGGAACTTACAA+GGG | 0.661396 | 5_2:-51337044 | Msa0774810:CDS |
| TGGAAAAGAAGAAAATGTGA+AGG | 0.663229 | 5_2:-51337111 | Msa0774810:CDS |
| CTTGAAGTTCGACATGATCG+AGG | 0.672998 | 5_2:+51339147 | None:intergenic |
| CCTGGTATCAAGGTTGACAA+GGG | 0.676179 | 5_2:-51337740 | Msa0774810:CDS |
| ACTTCAACAGAGTACCCTCA+AGG | 0.678437 | 5_2:-51337141 | Msa0774810:CDS |
| GGGAAACAAGACAACAAAGG+AGG | 0.683439 | 5_2:+51339280 | None:intergenic |
| AACTTCAAGAGCAAGTACCA+TGG | 0.686368 | 5_2:-51339133 | Msa0774810:intron |
| TAAGGTACTGAAGGACACCA+GGG | 0.689754 | 5_2:+51338435 | None:intergenic |
| TAGGAAGTAAGTACCTGCAG+CGG | 0.691298 | 5_2:+51338373 | None:intergenic |
| AGTGCTCAGATGGCTCATTG+GGG | 0.704686 | 5_2:+51337588 | None:intergenic |
| CTTCACATGAAGACTCTCTG+AGG | 0.707482 | 5_2:+51336998 | None:intergenic |
| ATTGGGAAACAAGACAACAA+AGG | 0.714069 | 5_2:+51339277 | None:intergenic |
| TCAAGAGAGTGCCTTCAAGG+AGG | 0.717476 | 5_2:+51337387 | None:intergenic |
| AAGGTACTGAAGGACACCAG+GGG | 0.750874 | 5_2:+51338436 | None:intergenic |
| GTACTGAAGGACACCAGGGG+CGG | 0.769749 | 5_2:+51338439 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTAATTTGAAATTATG+TGG | - | chr5_2:51339224-51339243 | Msa0774810:five_prime_UTR | 10.0% |
| !! | TTTATATATAGTGATTATGA+TGG | + | chr5_2:51336722-51336741 | None:intergenic | 15.0% |
| !! | TATTTATGAAATTGTAAATC+AGG | - | chr5_2:51337147-51337166 | Msa0774810:CDS | 15.0% |
| !! | ATTTATGAAATTGTAAATCA+GGG | - | chr5_2:51337148-51337167 | Msa0774810:CDS | 15.0% |
| !! | AAAATAAGTAGATCTATTTA+AGG | - | chr5_2:51337188-51337207 | Msa0774810:CDS | 15.0% |
| !!! | CATGAATGTATTTTTTTTTT+AGG | - | chr5_2:51338170-51338189 | Msa0774810:intron | 15.0% |
| !!! | TTTGTTCTGTTTTATTTGTA+TGG | - | chr5_2:51336966-51336985 | Msa0774810:exon | 20.0% |
| !!! | TGTCTAATCATGATTAATTT+TGG | - | chr5_2:51337283-51337302 | Msa0774810:CDS | 20.0% |
| !!! | GTCTAATCATGATTAATTTT+GGG | - | chr5_2:51337284-51337303 | Msa0774810:CDS | 20.0% |
| !!! | TTTGTTCTTTTGATAATTTC+AGG | - | chr5_2:51339135-51339154 | Msa0774810:CDS | 20.0% |
| !!! | TATAGTGATTATGATGGATT+GGG | + | chr5_2:51336716-51336735 | None:intergenic | 25.0% |
| !!! | ATATAGTGATTATGATGGAT+TGG | + | chr5_2:51336717-51336736 | None:intergenic | 25.0% |
| ! | AAGAGAATAGAATTATACCA+TGG | + | chr5_2:51336860-51336879 | None:intergenic | 25.0% |
| !!! | TCTGTTTTATTTGTATGGAT+CGG | - | chr5_2:51336971-51336990 | Msa0774810:exon | 25.0% |
| ! | TTAATTAGATTGTTGCAGTA+AGG | - | chr5_2:51337317-51337336 | Msa0774810:CDS | 25.0% |
| ! | GTAAATATTGTTCAGATTGT+AGG | + | chr5_2:51337629-51337648 | None:intergenic | 25.0% |
| !! | ATGTATTGATGAACAATTCA+AGG | + | chr5_2:51337682-51337701 | None:intergenic | 25.0% |
| ! | TGCTTTGTATTGTAAAAGTT+TGG | - | chr5_2:51337752-51337771 | Msa0774810:CDS | 25.0% |
| ! | CATATAAGAAAACGTGTTAA+AGG | + | chr5_2:51337896-51337915 | None:intergenic | 25.0% |
| !!! | ATTTTTTGCATCCCAAAAAA+GGG | + | chr5_2:51338026-51338045 | None:intergenic | 25.0% |
| !!! | TCTTTTGAAGATTAGAAAGA+GGG | - | chr5_2:51339031-51339050 | Msa0774810:intron | 25.0% |
| !!! | TCTTGTTATTTTGAGTATTG+TGG | - | chr5_2:51339061-51339080 | Msa0774810:intron | 25.0% |
| ! | TTTATAATAACCCTTTAGCT+CGG | + | chr5_2:51339181-51339200 | None:intergenic | 25.0% |
| !! | ATTTCGGATTAATTTAGGAT+GGG | + | chr5_2:51339270-51339289 | None:intergenic | 25.0% |
| ! | ATTCGATTTCGGATTAATTT+AGG | + | chr5_2:51339275-51339294 | None:intergenic | 25.0% |
| ! | GAGAAATAAAGTGAGGTTTT+GGG | + | chr5_2:51336745-51336764 | None:intergenic | 30.0% |
| ! | TGAGAAATAAAGTGAGGTTT+TGG | + | chr5_2:51336746-51336765 | None:intergenic | 30.0% |
| TTGGAAGAGAATGAAAAAGA+GGG | + | chr5_2:51336796-51336815 | None:intergenic | 30.0% | |
| TTTGGAAGAGAATGAAAAAG+AGG | + | chr5_2:51336797-51336816 | None:intergenic | 30.0% | |
| AGATCTATTGTTATCACCTT+CGG | - | chr5_2:51336909-51336928 | Msa0774810:three_prime_UTR | 30.0% | |
| AGTAAGGTTTATAGTTGTGT+TGG | - | chr5_2:51337333-51337352 | Msa0774810:CDS | 30.0% | |
| TATTGTAAAAGTTTGGATCG+TGG | - | chr5_2:51337759-51337778 | Msa0774810:CDS | 30.0% | |
| ATCTATTGCTTTGTGAAGTT+TGG | - | chr5_2:51337849-51337868 | Msa0774810:intron | 30.0% | |
| AAATAGTGATCCATCATGTT+AGG | - | chr5_2:51337949-51337968 | Msa0774810:intron | 30.0% | |
| !!! | TTTTTTGCATCCCAAAAAAG+GGG | + | chr5_2:51338025-51338044 | None:intergenic | 30.0% |
| !!! | CATTTTTTGCATCCCAAAAA+AGG | + | chr5_2:51338027-51338046 | None:intergenic | 30.0% |
| ! | TTCTTGATTGCTTCTTTTTG+TGG | - | chr5_2:51338101-51338120 | Msa0774810:intron | 30.0% |
| TGGAAAAGAAGAAAATGTGA+AGG | - | chr5_2:51338862-51338881 | Msa0774810:intron | 30.0% | |
| !! | AAGTATTGATGAGTCAAAGT+TGG | - | chr5_2:51339004-51339023 | Msa0774810:intron | 30.0% |
| !! | CTCTTTTGAAGATTAGAAAG+AGG | - | chr5_2:51339030-51339049 | Msa0774810:intron | 30.0% |
| ! | TTATAATAACCCTTTAGCTC+GGG | + | chr5_2:51339180-51339199 | None:intergenic | 30.0% |
| GATTTCGGATTAATTTAGGA+TGG | + | chr5_2:51339271-51339290 | None:intergenic | 30.0% | |
| ATTGGGAAACAAGACAACAA+AGG | + | chr5_2:51336699-51336718 | None:intergenic | 35.0% | |
| AGAGAGTGAGAAATAAAGTG+AGG | + | chr5_2:51336752-51336771 | None:intergenic | 35.0% | |
| GGTAGGTTAAGAATAAGGTA+GGG | + | chr5_2:51336775-51336794 | None:intergenic | 35.0% | |
| AAGAGGGTAGGTTAAGAATA+AGG | + | chr5_2:51336780-51336799 | None:intergenic | 35.0% | |
| AAGAGAATGAAAAAGAGGGT+AGG | + | chr5_2:51336792-51336811 | None:intergenic | 35.0% | |
| AAAAATTGAGCAAGATCCGA+AGG | + | chr5_2:51336928-51336947 | None:intergenic | 35.0% | |
| TTGTATGGATCGGTAATTGT+TGG | - | chr5_2:51336981-51337000 | Msa0774810:exon | 35.0% | |
| TTGTTCAGATTGTAGGAACT+AGG | + | chr5_2:51337622-51337641 | None:intergenic | 35.0% | |
| TCTATTGCTTCCTAACATGA+TGG | + | chr5_2:51337962-51337981 | None:intergenic | 35.0% | |
| ! | TTTTTGCATCCCAAAAAAGG+GGG | + | chr5_2:51338024-51338043 | None:intergenic | 35.0% |
| TCGTTCAAGACATCAACAAA+AGG | + | chr5_2:51338200-51338219 | None:intergenic | 35.0% | |
| !! | TCAAGAAGCTTTGTTGACAA+GGG | - | chr5_2:51338889-51338908 | Msa0774810:intron | 35.0% |
| TACAAGGGTAACTCTAAACT+TGG | - | chr5_2:51338944-51338963 | Msa0774810:intron | 35.0% | |
| !! | AATTTCAGGTTCAGTGTACT+TGG | - | chr5_2:51339149-51339168 | Msa0774810:exon | 35.0% |
| GGGTAGGTTAAGAATAAGGT+AGG | + | chr5_2:51336776-51336795 | None:intergenic | 40.0% | |
| !! | TGATCGAGGTAGGTTTGTTT+TGG | + | chr5_2:51336815-51336834 | None:intergenic | 40.0% |
| AACTTCAAGAGCAAGTACCA+TGG | - | chr5_2:51336840-51336859 | Msa0774810:three_prime_UTR | 40.0% | |
| TCGTTACATCAGATCCTTGA+AGG | - | chr5_2:51337084-51337103 | Msa0774810:CDS | 40.0% | |
| CGTTACATCAGATCCTTGAA+GGG | - | chr5_2:51337085-51337104 | Msa0774810:CDS | 40.0% | |
| GCTAAACTCAAAACCCTTCA+AGG | + | chr5_2:51337101-51337120 | None:intergenic | 40.0% | |
| TAGACGCTTTCCAATTGTTC+CGG | + | chr5_2:51337453-51337472 | None:intergenic | 40.0% | |
| ! | TGCATTTTTCCCCCCTTTTT+TGG | - | chr5_2:51338011-51338030 | Msa0774810:intron | 40.0% |
| ! | GCATTTTTCCCCCCTTTTTT+GGG | - | chr5_2:51338012-51338031 | Msa0774810:intron | 40.0% |
| ! | TTTTGCATCCCAAAAAAGGG+GGG | + | chr5_2:51338023-51338042 | None:intergenic | 40.0% |
| TGTGCTAAGTACTATGAAGC+AGG | - | chr5_2:51338323-51338342 | Msa0774810:intron | 40.0% | |
| TCTATCCATGAGAATGCCTA+TGG | - | chr5_2:51338407-51338426 | Msa0774810:CDS | 40.0% | |
| TTGGCATATGACTGCATATC+GGG | + | chr5_2:51338438-51338457 | None:intergenic | 40.0% | |
| CTTGGCATATGACTGCATAT+CGG | + | chr5_2:51338439-51338458 | None:intergenic | 40.0% | |
| TTGGTACAAGTCCATTCTCT+TGG | + | chr5_2:51338457-51338476 | None:intergenic | 40.0% | |
| ! | GCACACTTTTGAATGTCATG+AGG | + | chr5_2:51338509-51338528 | None:intergenic | 40.0% |
| CAGACAAGAAAACAACAGCT+GGG | + | chr5_2:51338715-51338734 | None:intergenic | 40.0% | |
| AATGCCATCAACCAAGTGAA+GGG | - | chr5_2:51338770-51338789 | Msa0774810:intron | 40.0% | |
| CCTTCCAAAAGAGAAGGAAA+GGG | + | chr5_2:51338810-51338829 | None:intergenic | 40.0% | |
| !! | CCTTTCCTTCTCTTTTGGAA+GGG | - | chr5_2:51338808-51338827 | Msa0774810:intron | 40.0% |
| !! | CTCAAGAAGCTTTGTTGACA+AGG | - | chr5_2:51338888-51338907 | Msa0774810:intron | 40.0% |
| GCTACTCTTGGAACTTACAA+GGG | - | chr5_2:51338929-51338948 | Msa0774810:intron | 40.0% | |
| TGCGAGACAGAATAATTGCT+TGG | - | chr5_2:51339091-51339110 | Msa0774810:intron | 40.0% | |
| GGGAAACAAGACAACAAAGG+AGG | + | chr5_2:51336696-51336715 | None:intergenic | 45.0% | |
| AAGTTCGACATGATCGAGGT+AGG | + | chr5_2:51336825-51336844 | None:intergenic | 45.0% | |
| CTTGAAGTTCGACATGATCG+AGG | + | chr5_2:51336829-51336848 | None:intergenic | 45.0% | |
| ATTGCCAATGCTGCCTACAT+CGG | - | chr5_2:51337389-51337408 | Msa0774810:CDS | 45.0% | |
| GATGAGTCAACCGGAACAAT+TGG | - | chr5_2:51337440-51337459 | Msa0774810:CDS | 45.0% | |
| !! | TAAGGTACTGAAGGACACCA+GGG | + | chr5_2:51337541-51337560 | None:intergenic | 45.0% |
| !! | TGACTCCACTAAGGTACTGA+AGG | + | chr5_2:51337550-51337569 | None:intergenic | 45.0% |
| CAAAGAGGATGACTCCACTA+AGG | + | chr5_2:51337559-51337578 | None:intergenic | 45.0% | |
| TAGTGGAGTCATCCTCTTTG+AGG | - | chr5_2:51337559-51337578 | Msa0774810:CDS | 45.0% | |
| TAGGAAGTAAGTACCTGCAG+CGG | + | chr5_2:51337603-51337622 | None:intergenic | 45.0% | |
| TCAAGAACAGCTTCGTAAGC+AGG | + | chr5_2:51338088-51338107 | None:intergenic | 45.0% | |
| GTTGATGTCTTGAACGAAGC+TGG | - | chr5_2:51338203-51338222 | Msa0774810:intron | 45.0% | |
| TCCTGGTATCAAGGTTGACA+AGG | - | chr5_2:51338232-51338251 | Msa0774810:intron | 45.0% | |
| CCTGGTATCAAGGTTGACAA+GGG | - | chr5_2:51338233-51338252 | Msa0774810:intron | 45.0% | |
| TGGCGTGCAGTGCTTAAAAT+CGG | - | chr5_2:51338362-51338381 | Msa0774810:intron | 45.0% | |
| ! | TCATGGATAGAGTGCTCAGA+TGG | + | chr5_2:51338398-51338417 | None:intergenic | 45.0% |
| CCAAACCATAGGCATTCTCA+TGG | + | chr5_2:51338415-51338434 | None:intergenic | 45.0% | |
| CCATGAGAATGCCTATGGTT+TGG | - | chr5_2:51338412-51338431 | Msa0774810:CDS | 45.0% | |
| GCAGTCATATGCCAAGAGAA+TGG | - | chr5_2:51338443-51338462 | Msa0774810:CDS | 45.0% | |
| AGGATCTCAGGCTCAACAAT+TGG | + | chr5_2:51338476-51338495 | None:intergenic | 45.0% | |
| TGTCATGAGGTCCATCAACA+AGG | + | chr5_2:51338496-51338515 | None:intergenic | 45.0% | |
| CACTCTCTTGAAGCCTAACA+TGG | - | chr5_2:51338598-51338617 | Msa0774810:intron | 45.0% | |
| CCAGACAAGAAAACAACAGC+TGG | + | chr5_2:51338716-51338735 | None:intergenic | 45.0% | |
| !!! | CCAGCTGTTGTTTTCTTGTC+TGG | - | chr5_2:51338713-51338732 | Msa0774810:intron | 45.0% |
| !!! | GCTGTTGTTTTCTTGTCTGG+TGG | - | chr5_2:51338716-51338735 | Msa0774810:intron | 45.0% |
| !! | TCACTTGGTTGATGGCATTG+AGG | + | chr5_2:51338769-51338788 | None:intergenic | 45.0% |
| CAATGCCATCAACCAAGTGA+AGG | - | chr5_2:51338769-51338788 | Msa0774810:intron | 45.0% | |
| CTTACCCTTCACTTGGTTGA+TGG | + | chr5_2:51338777-51338796 | None:intergenic | 45.0% | |
| ATGGCTTCTTACCCTTCACT+TGG | + | chr5_2:51338784-51338803 | None:intergenic | 45.0% | |
| AAGTGAAGGGTAAGAAGCCA+TGG | - | chr5_2:51338783-51338802 | Msa0774810:intron | 45.0% | |
| AAAGAGAAGGAAAGGGTCCA+TGG | + | chr5_2:51338803-51338822 | None:intergenic | 45.0% | |
| ! | TGGACCCTTTCCTTCTCTTT+TGG | - | chr5_2:51338803-51338822 | Msa0774810:intron | 45.0% |
| ! | CCCTTTCCTTCTCTTTTGGA+AGG | - | chr5_2:51338807-51338826 | Msa0774810:intron | 45.0% |
| CCCTTCCAAAAGAGAAGGAA+AGG | + | chr5_2:51338811-51338830 | None:intergenic | 45.0% | |
| AAGTGCCCTTCCAAAAGAGA+AGG | + | chr5_2:51338816-51338835 | None:intergenic | 45.0% | |
| ! | ACTTCAACAGAGTACCCTCA+AGG | - | chr5_2:51338832-51338851 | Msa0774810:intron | 45.0% |
| ! | TTTTCCAGACCATGCCTTGA+GGG | + | chr5_2:51338849-51338868 | None:intergenic | 45.0% |
| !! | AGCTTTGTTGACAAGGGCTA+AGG | - | chr5_2:51338895-51338914 | Msa0774810:intron | 45.0% |
| AAGGGCTAAGGCTAATTCTG+AGG | - | chr5_2:51338907-51338926 | Msa0774810:intron | 45.0% | |
| !! | GCTAATTCTGAGGCTACTCT+TGG | - | chr5_2:51338917-51338936 | Msa0774810:intron | 45.0% |
| GGCTACTCTTGGAACTTACA+AGG | - | chr5_2:51338928-51338947 | Msa0774810:intron | 45.0% | |
| !! | GGTAACTCTAAACTTGGTGC+TGG | - | chr5_2:51338950-51338969 | Msa0774810:intron | 45.0% |
| CTTCACATGAAGACTCTCTG+AGG | + | chr5_2:51338978-51338997 | None:intergenic | 45.0% | |
| CTCAGAGAGTCTTCATGTGA+AGG | - | chr5_2:51338976-51338995 | Msa0774810:intron | 45.0% | |
| ! | AATAACCCTTTAGCTCGGGT+TGG | + | chr5_2:51339176-51339195 | None:intergenic | 45.0% |
| AGCAGCAAGAATACCCTTGC+CGG | + | chr5_2:51337420-51337439 | None:intergenic | 50.0% | |
| CTTGCTGCTGATGAGTCAAC+CGG | - | chr5_2:51337431-51337450 | Msa0774810:CDS | 50.0% | |
| GGGCGGTGAAAAGAAGTTCA+CGG | + | chr5_2:51337520-51337539 | None:intergenic | 50.0% | |
| !! | AAGGTACTGAAGGACACCAG+GGG | + | chr5_2:51337540-51337559 | None:intergenic | 50.0% |
| !! | CTAAGGTACTGAAGGACACC+AGG | + | chr5_2:51337542-51337561 | None:intergenic | 50.0% |
| GGTGTCCTTCAGTACCTTAG+TGG | - | chr5_2:51337542-51337561 | Msa0774810:CDS | 50.0% | |
| GGTAGAGGGTTTCCTCAAAG+AGG | + | chr5_2:51337574-51337593 | None:intergenic | 50.0% | |
| TGGTGTGCTTCCTGGTATCA+AGG | - | chr5_2:51338223-51338242 | Msa0774810:intron | 50.0% | |
| CCCTTGTCAACCTTGATACC+AGG | + | chr5_2:51338236-51338255 | None:intergenic | 50.0% | |
| ATCAGTTCCGGCAAGCTCAA+CGG | + | chr5_2:51338261-51338280 | None:intergenic | 50.0% | |
| GGTGGTTTCTCCATCAGTTC+CGG | + | chr5_2:51338273-51338292 | None:intergenic | 50.0% | |
| TGATGGAGAAACCACCACTC+AGG | - | chr5_2:51338277-51338296 | Msa0774810:intron | 50.0% | |
| GATGGAGAAACCACCACTCA+GGG | - | chr5_2:51338278-51338297 | Msa0774810:intron | 50.0% | |
| AAGTCCATCAAGACCCTGAG+TGG | + | chr5_2:51338294-51338313 | None:intergenic | 50.0% | |
| !! | ACTCAGGGTCTTGATGGACT+TGG | - | chr5_2:51338293-51338312 | Msa0774810:intron | 50.0% |
| CAGGTGCACGTTTCGCTAAA+TGG | - | chr5_2:51338342-51338361 | Msa0774810:intron | 50.0% | |
| AGTGCTCAGATGGCTCATTG+GGG | + | chr5_2:51338388-51338407 | None:intergenic | 50.0% | |
| GAGTGCTCAGATGGCTCATT+GGG | + | chr5_2:51338389-51338408 | None:intergenic | 50.0% | |
| ! | AGAGTGCTCAGATGGCTCAT+TGG | + | chr5_2:51338390-51338409 | None:intergenic | 50.0% |
| TGCATATCGGGCCAAACCAT+AGG | + | chr5_2:51338426-51338445 | None:intergenic | 50.0% | |
| GAGCCTGAGATCCTTGTTGA+TGG | - | chr5_2:51338482-51338501 | Msa0774810:CDS | 50.0% | |
| GGTCCATCAACAAGGATCTC+AGG | + | chr5_2:51338488-51338507 | None:intergenic | 50.0% | |
| TGTCCTTGCAGCATGCTACA+AGG | - | chr5_2:51338544-51338563 | Msa0774810:CDS | 50.0% | |
| GAGGACATGGTGGTCATTCA+AGG | + | chr5_2:51338570-51338589 | None:intergenic | 50.0% | |
| !! | TCAAGAGAGTGCCTTCAAGG+AGG | + | chr5_2:51338589-51338608 | None:intergenic | 50.0% |
| !! | GCTTCAAGAGAGTGCCTTCA+AGG | + | chr5_2:51338592-51338611 | None:intergenic | 50.0% |
| AAGCCTAACATGGTTACCCC+TGG | - | chr5_2:51338608-51338627 | Msa0774810:intron | 50.0% | |
| GATCCAGGGGTAACCATGTT+AGG | + | chr5_2:51338614-51338633 | None:intergenic | 50.0% | |
| ! | CTTTGGTGCATCAGATCCAG+GGG | + | chr5_2:51338627-51338646 | None:intergenic | 50.0% |
| ! | CCTTTGGTGCATCAGATCCA+GGG | + | chr5_2:51338628-51338647 | None:intergenic | 50.0% |
| ! | ACCTTTGGTGCATCAGATCC+AGG | + | chr5_2:51338629-51338648 | None:intergenic | 50.0% |
| AGTGTGCTCAGCAACAACCT+CGG | + | chr5_2:51338657-51338676 | None:intergenic | 50.0% | |
| GAAAACAACAGCTGGGACTG+CGG | + | chr5_2:51338708-51338727 | None:intergenic | 50.0% | |
| ! | GATGGCATTGAGGTTGACAC+TGG | + | chr5_2:51338759-51338778 | None:intergenic | 50.0% |
| ! | AACAGAGTACCCTCAAGGCA+TGG | - | chr5_2:51338837-51338856 | Msa0774810:intron | 50.0% |
| ! | CTTTTCCAGACCATGCCTTG+AGG | + | chr5_2:51338850-51338869 | None:intergenic | 50.0% |
| TTGGTCCAACCCGAGCTAAA+GGG | - | chr5_2:51339168-51339187 | Msa0774810:five_prime_UTR | 50.0% | |
| ! | TGTGCCGATGTAGGCAGCAT+TGG | + | chr5_2:51337396-51337415 | None:intergenic | 55.0% |
| GCAGCAAGAATACCCTTGCC+GGG | + | chr5_2:51337419-51337438 | None:intergenic | 55.0% | |
| ! | TTCACGGAGAGCACGTCTGT+TGG | + | chr5_2:51337504-51337523 | None:intergenic | 55.0% |
| ! | GAACTTCTTTTCACCGCCCC+TGG | - | chr5_2:51337521-51337540 | Msa0774810:CDS | 55.0% |
| TGCAGCGGTGCTTTGGTAGA+GGG | + | chr5_2:51337588-51337607 | None:intergenic | 55.0% | |
| AAGTACCTGCAGCGGTGCTT+TGG | + | chr5_2:51337595-51337614 | None:intergenic | 55.0% | |
| AACGAAGCTGGTGTGCTTCC+TGG | - | chr5_2:51338215-51338234 | Msa0774810:intron | 55.0% | |
| !! | AAGGGTACCGTTGAGCTTGC+CGG | - | chr5_2:51338251-51338270 | Msa0774810:intron | 55.0% |
| GTTGAGCTTGCCGGAACTGA+TGG | - | chr5_2:51338260-51338279 | Msa0774810:intron | 55.0% | |
| ACCACCACTCAGGGTCTTGA+TGG | - | chr5_2:51338287-51338306 | Msa0774810:intron | 55.0% | |
| TCCATCAAGACCCTGAGTGG+TGG | + | chr5_2:51338291-51338310 | None:intergenic | 55.0% | |
| ! | AGGCCTTGTAGCATGCTGCA+AGG | + | chr5_2:51338550-51338569 | None:intergenic | 55.0% |
| GACCACCATGTCCTCCTTGA+AGG | - | chr5_2:51338575-51338594 | Msa0774810:CDS | 55.0% | |
| TGCCTTCAAGGAGGACATGG+TGG | + | chr5_2:51338580-51338599 | None:intergenic | 55.0% | |
| GAGTGCCTTCAAGGAGGACA+TGG | + | chr5_2:51338583-51338602 | None:intergenic | 55.0% | |
| CCCTGGATCTGATGCACCAA+AGG | - | chr5_2:51338625-51338644 | Msa0774810:intron | 55.0% | |
| ACAACCTCGGGTGCAACCTT+TGG | + | chr5_2:51338644-51338663 | None:intergenic | 55.0% | |
| GTGTGCTCAGCAACAACCTC+GGG | + | chr5_2:51338656-51338675 | None:intergenic | 55.0% | |
| ! | CTTGTCTGGTGGACAGAGTG+AGG | - | chr5_2:51338727-51338746 | Msa0774810:intron | 55.0% |
| ! | TGGTGGACAGAGTGAGGAAG+AGG | - | chr5_2:51338733-51338752 | Msa0774810:intron | 55.0% |
| AGTACCCTCAAGGCATGGTC+TGG | - | chr5_2:51338842-51338861 | Msa0774810:intron | 55.0% | |
| CTTGGTCCAACCCGAGCTAA+AGG | - | chr5_2:51339167-51339186 | Msa0774810:five_prime_UTR | 55.0% | |
| TACATCGGCACACCCGGCAA+GGG | - | chr5_2:51337404-51337423 | Msa0774810:CDS | 60.0% | |
| GTACTGAAGGACACCAGGGG+CGG | + | chr5_2:51337537-51337556 | None:intergenic | 60.0% | |
| CTGCAGCGGTGCTTTGGTAG+AGG | + | chr5_2:51337589-51337608 | None:intergenic | 60.0% | |
| !! | CTCTACCAAAGCACCGCTGC+AGG | - | chr5_2:51337587-51337606 | Msa0774810:CDS | 60.0% |
| GCATGCTGCAAGGACACGCT+CGG | + | chr5_2:51338540-51338559 | None:intergenic | 60.0% | |
| TGCACCAAAGGTTGCACCCG+AGG | - | chr5_2:51338637-51338656 | Msa0774810:intron | 60.0% | |
| GCTGCCTACATCGGCACACC+CGG | - | chr5_2:51337398-51337417 | Msa0774810:CDS | 65.0% | |
| ! | CTTGCCGGGTGTGCCGATGT+AGG | + | chr5_2:51337405-51337424 | None:intergenic | 65.0% |
| CTACATCGGCACACCCGGCA+AGG | - | chr5_2:51337403-51337422 | Msa0774810:CDS | 65.0% | |
| AGCTGGGACTGCGGCAGGTA+CGG | + | chr5_2:51338699-51338718 | None:intergenic | 65.0% | |
| ACAACAGCTGGGACTGCGGC+AGG | + | chr5_2:51338704-51338723 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 51336691 | 51339304 | 51336691 | ID=Msa0774810;Name=Msa0774810 |
| chr5_2 | mRNA | 51336691 | 51339304 | 51336691 | ID=Msa0774810-mRNA-1;Parent=Msa0774810;Name=Msa0774810-mRNA-1;_AED=0.24;_eAED=0.24;_QI=143|1|1|1|1|1|3|292|358 |
| chr5_2 | exon | 51336691 | 51337803 | 51336691 | ID=Msa0774810-mRNA-1:exon:15279;Parent=Msa0774810-mRNA-1 |
| chr5_2 | exon | 51338387 | 51338614 | 51338387 | ID=Msa0774810-mRNA-1:exon:15278;Parent=Msa0774810-mRNA-1 |
| chr5_2 | exon | 51339134 | 51339304 | 51339134 | ID=Msa0774810-mRNA-1:exon:15277;Parent=Msa0774810-mRNA-1 |
| chr5_2 | five_prime_UTR | 51339162 | 51339304 | 51339162 | ID=Msa0774810-mRNA-1:five_prime_utr;Parent=Msa0774810-mRNA-1 |
| chr5_2 | CDS | 51339134 | 51339161 | 51339134 | ID=Msa0774810-mRNA-1:cds;Parent=Msa0774810-mRNA-1 |
| chr5_2 | CDS | 51338387 | 51338614 | 51338387 | ID=Msa0774810-mRNA-1:cds;Parent=Msa0774810-mRNA-1 |
| chr5_2 | CDS | 51336983 | 51337803 | 51336983 | ID=Msa0774810-mRNA-1:cds;Parent=Msa0774810-mRNA-1 |
| chr5_2 | three_prime_UTR | 51336691 | 51336982 | 51336691 | ID=Msa0774810-mRNA-1:three_prime_utr;Parent=Msa0774810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
