AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0705480

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0705480 MtrunA17_Chr8g0384121 94.965 576 27 1 1 576 1 574 0.0 1110
Msa0705480 MtrunA17_Chr3g0129921 65.288 556 169 9 10 556 14 554 0.0 741
Msa0705480 MtrunA17_Chr8g0345281 37.996 529 285 15 58 558 68 581 1.05e-103 325
Msa0705480 MtrunA17_Chr3g0126771 37.755 588 304 19 16 567 37 598 3.52e-103 323
Msa0705480 MtrunA17_Chr4g0011791 38.867 512 261 14 56 555 27 498 2.48e-102 318
Msa0705480 MtrunA17_Chr4g0011771 38.728 519 279 15 50 560 20 507 4.17e-101 315
Msa0705480 MtrunA17_Chr7g0269541 37.170 530 276 15 59 558 46 548 9.00e-101 316
Msa0705480 MtrunA17_Chr1g0147051 34.747 613 311 20 3 567 37 608 6.78e-100 315
Msa0705480 MtrunA17_Chr4g0069841 39.434 459 234 10 122 565 86 515 7.24e-99 310
Msa0705480 MtrunA17_Chr7g0269531 36.162 542 274 15 59 555 40 554 2.32e-98 310
Msa0705480 MtrunA17_Chr7g0269521 36.194 536 302 12 59 565 37 561 4.75e-97 306
Msa0705480 MtrunA17_Chr1g0192331 35.373 523 299 13 50 555 17 517 5.70e-96 303
Msa0705480 MtrunA17_Chr4g0011751 39.348 460 239 11 110 558 51 481 1.50e-95 300
Msa0705480 MtrunA17_Chr2g0302021 37.872 470 229 13 122 565 92 524 6.06e-95 300
Msa0705480 MtrunA17_Chr7g0272141 34.429 578 307 17 22 568 8 544 1.49e-93 297
Msa0705480 MtrunA17_Chr4g0069861 38.362 464 236 11 122 565 83 516 2.53e-93 295
Msa0705480 MtrunA17_Chr7g0269511 34.848 594 306 18 14 561 1 559 6.20e-93 296
Msa0705480 MtrunA17_Chr1g0175661 38.242 455 248 11 123 555 104 547 1.81e-92 294
Msa0705480 MtrunA17_Chr8g0391311 35.019 534 280 15 59 558 33 533 3.30e-92 293
Msa0705480 MtrunA17_Chr1g0195301 37.551 490 240 14 102 555 85 544 3.78e-92 293
Msa0705480 MtrunA17_Chr1g0195321 37.551 490 240 14 102 555 85 544 3.78e-92 293
Msa0705480 MtrunA17_Chr1g0195331 37.755 490 239 14 102 555 85 544 6.92e-92 293
Msa0705480 MtrunA17_Chr8g0391291 34.766 535 280 15 59 558 31 531 1.22e-91 291
Msa0705480 MtrunA17_Chr8g0354911 35.209 551 297 14 60 565 76 611 2.30e-90 290
Msa0705480 MtrunA17_Chr2g0301931 46.392 291 141 5 277 565 14 291 2.75e-90 280
Msa0705480 MtrunA17_Chr4g0069891 32.961 537 306 15 58 565 81 592 5.94e-90 289
Msa0705480 MtrunA17_Chr7g0233831 36.117 515 277 16 73 565 70 554 6.90e-90 288
Msa0705480 MtrunA17_Chr1g0195351 37.143 490 240 15 102 555 85 542 8.21e-89 285
Msa0705480 MtrunA17_Chr4g0069881 38.515 431 222 10 148 565 134 534 1.58e-87 281
Msa0705480 MtrunA17_Chr7g0233771 36.217 497 252 16 99 565 92 553 1.97e-87 281
Msa0705480 MtrunA17_Chr2g0295531 35.583 489 272 17 58 531 43 503 2.91e-87 282
Msa0705480 MtrunA17_Chr8g0354901 35.373 523 295 15 56 558 74 573 1.63e-86 280
Msa0705480 MtrunA17_Chr3g0079341 37.778 450 230 14 126 558 103 519 1.85e-86 278
Msa0705480 MtrunA17_Chr3g0080381 45.806 310 154 6 260 565 328 627 2.01e-86 281
Msa0705480 MtrunA17_Chr3g0079361 37.333 450 232 13 126 558 103 519 2.59e-85 275
Msa0705480 MtrunA17_Chr7g0272151 31.507 584 341 18 16 560 14 577 3.28e-85 276
Msa0705480 MtrunA17_Chr7g0233801 36.961 487 268 16 85 558 85 545 4.07e-85 275
Msa0705480 MtrunA17_Chr3g0079351 34.857 525 289 15 54 558 28 519 4.18e-85 274
Msa0705480 MtrunA17_Chr3g0080391 34.875 519 297 17 58 558 71 566 8.80e-85 275
Msa0705480 MtrunA17_Chr3g0090091 44.753 324 154 9 240 555 211 517 1.54e-84 273
Msa0705480 MtrunA17_Chr1g0194091 33.087 541 306 17 58 560 41 563 6.09e-84 273
Msa0705480 MtrunA17_Chr1g0192311 31.193 545 323 14 58 574 58 578 6.78e-83 270
Msa0705480 MtrunA17_Chr1g0192281 31.193 545 323 14 58 574 58 578 6.78e-83 270
Msa0705480 MtrunA17_Chr1g0195311 50.379 264 116 5 296 555 51 303 7.60e-83 261
Msa0705480 MtrunA17_Chr4g0018371 34.942 518 298 16 58 558 36 531 2.11e-82 268
Msa0705480 MtrunA17_Chr4g0000121 31.193 545 323 14 58 574 45 565 4.63e-81 265
Msa0705480 MtrunA17_Chr8g0345211 34.701 536 287 19 55 560 74 576 7.01e-80 262
Msa0705480 MtrunA17_Chr1g0192321 32.065 552 308 17 58 566 56 583 5.40e-79 260
Msa0705480 MtrunA17_Chr1g0194081 35.831 427 249 12 151 565 149 562 1.69e-78 258
Msa0705480 MtrunA17_Chr1g0192301 30.459 545 327 14 58 574 63 583 1.60e-77 256
Msa0705480 MtrunA17_Chr4g0067611 34.274 496 279 17 58 531 59 529 1.87e-77 256
Msa0705480 MtrunA17_Chr7g0270651 31.450 531 317 14 62 562 46 559 8.52e-76 251
Msa0705480 MtrunA17_Chr2g0295551 33.464 511 290 18 53 539 51 535 1.80e-75 250
Msa0705480 MtrunA17_Chr7g0270691 42.056 321 172 8 247 565 240 548 1.87e-75 249
Msa0705480 MtrunA17_Chr7g0270661 32.996 494 285 13 96 555 82 563 3.02e-75 249
Msa0705480 MtrunA17_Chr7g0270671 32.996 494 285 13 96 555 82 563 3.02e-75 249
Msa0705480 MtrunA17_Chr2g0302001 46.360 261 129 5 307 565 185 436 6.00e-73 239
Msa0705480 MtrunA17_Chr4g0067601 32.106 489 299 12 58 531 59 529 2.78e-72 242
Msa0705480 MtrunA17_Chr7g0270631 32.860 493 290 13 96 562 70 547 8.10e-70 244
Msa0705480 MtrunA17_Chr7g0270631 31.504 492 292 13 96 552 618 1099 3.62e-61 219
Msa0705480 MtrunA17_Chr8g0380581 36.420 324 194 6 239 560 57 370 1.35e-65 218
Msa0705480 MtrunA17_Chr2g0295541 30.220 546 292 21 53 539 51 566 6.62e-63 217
Msa0705480 MtrunA17_Chr7g0234711 44.068 236 112 5 338 565 45 268 1.69e-62 207
Msa0705480 MtrunA17_Chr6g0487101 36.792 318 169 6 249 556 86 381 8.21e-59 201
Msa0705480 MtrunA17_Chr5g0437831 36.364 330 183 11 245 565 71 382 3.65e-58 199
Msa0705480 MtrunA17_Chr8g0389771 35.758 330 176 8 242 557 72 379 3.38e-57 196
Msa0705480 MtrunA17_Chr7g0258341 33.537 328 194 6 238 557 78 389 9.92e-57 195
Msa0705480 MtrunA17_Chr2g0334111 34.663 326 184 8 244 565 22 322 6.21e-56 191
Msa0705480 MtrunA17_Chr7g0268241 35.604 323 181 9 247 565 50 349 2.50e-55 190
Msa0705480 MtrunA17_Chr7g0271381 27.632 532 341 14 54 569 56 559 4.27e-50 181
Msa0705480 MtrunA17_Chr5g0446301 35.783 313 168 6 255 556 68 358 2.01e-49 175
Msa0705480 MtrunA17_Chr1g0161731 31.464 321 187 7 244 556 45 340 1.24e-47 169
Msa0705480 MtrunA17_Chr1g0194311 32.039 309 179 5 258 557 84 370 1.71e-45 164
Msa0705480 MtrunA17_Chr6g0453551 32.288 319 180 5 243 549 1 295 3.44e-45 162
Msa0705480 MtrunA17_Chr7g0217941 32.459 305 172 7 256 549 14 295 1.46e-43 157
Msa0705480 MtrunA17_Chr5g0399221 31.833 311 179 7 256 555 71 359 4.63e-43 157
Msa0705480 MtrunA17_Chr6g0466951 31.392 309 171 9 256 555 77 353 1.31e-41 153
Msa0705480 MtrunA17_Chr7g0265201 30.363 303 180 6 258 555 109 385 3.47e-39 147
Msa0705480 MtrunA17_Chr4g0070051 31.498 327 184 10 241 556 47 344 1.05e-38 145
Msa0705480 MtrunA17_Chr2g0294321 29.836 305 187 5 256 555 64 346 1.39e-38 145
Msa0705480 MtrunA17_Chr6g0466961 31.056 322 186 7 242 556 33 325 3.88e-38 143
Msa0705480 MtrunA17_Chr4g0037751 30.164 305 186 8 256 555 79 361 4.13e-34 133
Msa0705480 MtrunA17_Chr5g0440871 31.046 306 177 7 255 557 46 320 7.58e-34 131
Msa0705480 MtrunA17_Chr8g0351871 29.747 316 189 6 247 555 33 322 1.15e-33 130
Msa0705480 MtrunA17_Chr8g0391261 43.165 139 64 3 429 560 30 160 2.58e-31 119
Msa0705480 MtrunA17_Chr2g0299431 37.168 226 126 6 239 459 43 257 1.07e-30 121
Msa0705480 MtrunA17_Chr2g0295851 27.778 306 183 8 256 555 63 336 4.46e-30 120
Msa0705480 MtrunA17_Chr5g0420831 27.869 305 193 7 256 555 79 361 8.83e-30 120
Msa0705480 MtrunA17_Chr4g0025841 31.907 257 146 7 247 503 37 264 9.86e-30 118
Msa0705480 MtrunA17_Chr6g0459781 35.912 181 103 5 241 412 6 182 6.96e-27 108
Msa0705480 MtrunA17_Chr5g0440901 36.250 160 84 4 343 502 1 142 1.09e-24 100
Msa0705480 MtrunA17_Chr2g0314691 29.557 203 125 3 353 555 17 201 9.09e-24 99.4
Msa0705480 MtrunA17_Chr5g0437821 36.364 143 82 3 364 505 4 138 1.67e-22 93.6
Msa0705480 MtrunA17_Chr6g0460141 37.143 140 81 3 278 410 5 144 5.54e-21 89.7
Msa0705480 MtrunA17_Chr7g0265161 27.049 244 120 8 325 555 14 212 1.54e-17 82.4
Msa0705480 MtrunA17_Chr5g0440891 33.714 175 103 6 243 416 44 206 3.39e-17 80.5
Msa0705480 MtrunA17_Chr6g0459791 34.127 126 69 2 431 555 4 116 2.77e-15 72.4
Msa0705480 MtrunA17_Chr4g0073911 29.944 177 103 5 278 441 36 204 2.78e-15 75.9
Msa0705480 MtrunA17_Chr7g0234731 30.222 225 126 10 119 334 116 318 3.00e-14 73.9
Msa0705480 MtrunA17_Chr5g0440881 29.333 150 89 2 408 557 9 141 4.28e-14 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0705480 AT5G09760.1 65.326 522 166 6 45 558 36 550 0.0 709
Msa0705480 AT5G09760.2 65.698 516 166 5 51 558 64 576 0.0 708
Msa0705480 AT5G64640.1 60.949 548 199 7 25 558 55 601 0.0 685
Msa0705480 AT5G49180.1 35.965 570 323 15 14 560 14 564 2.11e-106 331
Msa0705480 AT3G05610.1 36.680 518 287 15 58 555 58 554 2.08e-104 329
Msa0705480 AT5G27870.1 36.364 528 295 16 51 555 42 551 1.93e-102 326
Msa0705480 AT3G06830.1 35.490 541 282 15 58 560 51 562 5.83e-102 320
Msa0705480 AT3G14310.1 37.273 550 290 17 49 558 50 584 8.96e-102 320
Msa0705480 AT2G45220.1 38.189 508 276 14 57 558 29 504 1.44e-101 317
Msa0705480 AT1G53830.1 35.979 567 306 17 26 558 36 579 1.26e-98 311
Msa0705480 AT4G02330.1 50.000 324 140 9 243 558 254 563 1.89e-98 311
Msa0705480 AT2G43050.1 40.220 455 217 13 126 565 101 515 3.42e-97 306
Msa0705480 AT1G11580.1 48.742 318 148 7 242 556 242 547 6.15e-96 304
Msa0705480 AT2G26450.1 34.679 545 301 20 42 558 86 603 6.22e-96 305
Msa0705480 AT1G11580.2 48.742 318 148 7 242 556 263 568 1.36e-95 303
Msa0705480 AT1G53840.1 35.348 546 301 16 38 555 55 576 7.94e-95 301
Msa0705480 AT1G23200.1 36.264 546 278 16 61 565 37 553 1.30e-94 300
Msa0705480 AT3G10720.2 34.249 546 305 12 61 565 82 614 2.31e-93 299
Msa0705480 AT3G05620.1 45.482 332 150 7 240 565 234 540 2.17e-92 294
Msa0705480 AT3G49220.1 34.856 591 319 19 6 567 44 597 2.78e-92 295
Msa0705480 AT3G60730.1 35.872 499 279 11 81 555 27 508 3.96e-92 293
Msa0705480 AT3G49220.3 34.856 591 319 19 6 567 89 642 7.48e-92 296
Msa0705480 AT2G26440.1 35.179 560 280 18 48 565 28 546 2.78e-91 291
Msa0705480 AT4G00190.1 35.922 515 264 15 60 560 6 468 2.96e-91 289
Msa0705480 AT5G53370.1 34.812 586 314 22 17 568 36 587 7.32e-91 291
Msa0705480 AT5G04970.1 34.301 551 304 12 61 568 87 622 1.39e-90 292
Msa0705480 AT5G53370.2 35.935 551 295 20 48 568 101 623 1.86e-90 291
Msa0705480 AT4G33220.2 46.505 329 153 8 244 565 89 401 5.75e-90 283
Msa0705480 AT3G59010.1 36.660 521 262 16 63 558 43 520 1.73e-89 286
Msa0705480 AT3G43270.1 47.678 323 146 9 246 561 214 520 3.59e-89 285
Msa0705480 AT4G33220.1 46.505 329 153 8 244 565 210 522 8.40e-89 284
Msa0705480 AT1G02810.1 34.233 593 301 20 17 557 8 563 9.14e-89 286
Msa0705480 AT4G33230.1 34.470 528 293 17 58 557 95 597 1.24e-88 286
Msa0705480 AT3G10710.1 33.638 547 298 16 45 565 53 560 1.65e-88 285
Msa0705480 AT5G04960.1 33.080 526 294 14 58 560 68 558 8.70e-88 283
Msa0705480 AT2G47550.1 36.042 566 270 19 46 555 18 547 2.46e-87 281
Msa0705480 AT5G20860.2 34.345 527 293 18 56 558 33 530 2.04e-83 270
Msa0705480 AT4G02320.1 34.669 499 276 16 83 560 43 512 6.22e-82 266
Msa0705480 AT3G14300.1 34.179 591 314 21 2 555 406 958 1.40e-80 273
Msa0705480 AT3G10720.1 47.191 267 130 4 301 565 1 258 4.80e-80 253
Msa0705480 AT5G51490.1 33.846 520 286 12 62 555 38 525 1.62e-78 258
Msa0705480 AT4G02300.1 43.949 314 160 6 256 565 230 531 2.51e-78 257
Msa0705480 AT5G51500.1 43.125 320 167 7 246 560 225 534 2.03e-77 255
Msa0705480 AT3G47400.1 43.030 330 172 8 241 565 275 593 2.19e-76 253
Msa0705480 AT4G15980.1 40.938 320 176 5 243 560 388 696 8.49e-75 252
Msa0705480 AT4G15980.2 40.938 320 176 5 243 560 398 706 1.34e-74 251
Msa0705480 AT3G27980.1 41.896 327 165 8 246 565 188 496 5.26e-74 244
Msa0705480 AT1G11370.1 46.484 256 125 5 246 501 45 288 3.33e-72 233
Msa0705480 AT1G11590.1 40.483 331 172 8 242 565 211 523 9.59e-71 237
Msa0705480 AT4G03930.1 40.244 328 177 7 242 565 211 523 2.51e-70 236
Msa0705480 AT3G62170.1 34.430 456 248 11 148 565 145 587 2.87e-68 232
Msa0705480 AT2G47040.1 34.316 475 237 14 148 565 138 594 1.32e-67 230
Msa0705480 AT5G20860.1 32.530 498 257 16 56 531 33 473 2.02e-66 225
Msa0705480 AT2G47030.1 31.095 566 313 18 58 565 41 587 9.94e-66 225
Msa0705480 AT1G05310.1 35.873 315 178 6 254 560 95 393 1.44e-56 195
Msa0705480 AT5G19730.1 34.862 327 179 6 242 556 78 382 2.67e-56 194
Msa0705480 AT2G21610.1 31.457 302 181 5 255 556 58 333 3.03e-48 172
Msa0705480 AT2G21610.2 31.457 302 181 5 255 556 63 338 4.25e-48 171
Msa0705480 AT5G55590.1 35.514 321 174 7 247 556 81 379 2.64e-47 170
Msa0705480 AT3G29090.1 32.787 305 171 5 256 549 15 296 2.24e-45 163
Msa0705480 AT2G36710.1 31.579 323 193 6 243 560 91 390 1.01e-44 164
Msa0705480 AT5G47500.1 32.039 309 177 7 258 555 71 357 1.07e-44 162
Msa0705480 AT3G17060.1 30.945 307 183 6 255 555 53 336 8.27e-44 159
Msa0705480 AT3G24130.1 32.177 317 182 8 256 562 42 335 1.19e-42 156
Msa0705480 AT2G36700.1 32.595 316 181 7 249 555 41 333 2.53e-42 155
Msa0705480 AT5G55590.2 37.828 267 133 7 247 502 81 325 9.38e-42 154
Msa0705480 AT5G18990.1 31.776 321 188 5 245 556 26 324 2.95e-41 152
Msa0705480 AT2G19150.1 32.441 299 184 5 258 555 51 332 4.99e-40 149
Msa0705480 AT5G61680.1 29.846 325 196 7 240 555 57 358 2.39e-39 148
Msa0705480 AT5G07430.1 30.990 313 188 7 247 555 67 355 2.63e-39 147
Msa0705480 AT2G47280.1 31.699 306 182 6 256 555 43 327 1.22e-38 145
Msa0705480 AT5G26810.1 29.874 318 199 5 246 555 32 333 3.99e-38 144
Msa0705480 AT5G07410.1 27.541 305 193 6 256 555 74 355 4.14e-36 139
Msa0705480 AT1G69940.1 27.541 305 193 6 256 555 74 355 6.15e-36 138
Msa0705480 AT5G07420.1 28.213 319 202 6 241 555 60 355 9.01e-35 135
Msa0705480 AT2G19150.2 33.333 246 146 5 258 502 51 279 2.51e-32 126
Msa0705480 AT1G44980.1 39.080 174 102 3 242 415 73 242 1.29e-27 112

Find 213 sgRNAs with CRISPR-Local

Find 260 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGGTGGTGGTTGTGGTTA+TGG 0.166550 4_4:-78185896 None:intergenic
TTCCAGAACTGTTTGATTAA+TGG 0.170821 4_4:+78187781 Msa0705480:CDS
TGATGGCGGATTGGAGAATT+TGG 0.187737 4_4:-78186049 None:intergenic
TGGAAAGCGGGTTGCTTTAC+AGG 0.191752 4_4:-78185976 None:intergenic
CCACCGAGCGCGACGGTTTA+TGG 0.218919 4_4:+78186444 Msa0705480:CDS
AGGGAGAGGGAGTGGGTTGG+TGG 0.219725 4_4:-78185911 None:intergenic
ATAGGAGGCATCAGTAAAAT+AGG 0.229442 4_4:+78188157 Msa0705480:exon
ATTTGGAGAGCGGTGGGATT+TGG 0.237129 4_4:-78186032 None:intergenic
GGAGGGAGAGGGAGAGGGAG+TGG 0.246203 4_4:-78185919 None:intergenic
GTTATTATTGTATTAGTAAA+TGG 0.252439 4_4:-78188228 None:intergenic
CGGTGGGATTTGGAGGGATA+TGG 0.255325 4_4:-78186022 None:intergenic
TGTATGGGGCAATTTGAAAT+TGG 0.267963 4_4:+78188370 Msa0705480:three_prime_UTR
ATTTCAATAGCAATCGAAAA+AGG 0.268506 4_4:+78188260 Msa0705480:three_prime_UTR
AGTGGTTATTGCGAGTTTAA+TGG 0.274778 4_4:-78185805 None:intergenic
GTGTGTCGTTGGCGTATTTC+AGG 0.277759 4_4:-78186301 None:intergenic
GCACTTAAGACACTTTATTA+TGG 0.281863 4_4:+78187961 Msa0705480:CDS
TTCCATTAATCAAACAGTTC+TGG 0.295517 4_4:-78187783 None:intergenic
GAGTGGGTTGGTGGTGGTTG+TGG 0.313032 4_4:-78185902 None:intergenic
TATGGAGAATTTGAGAATAC+TGG 0.319097 4_4:+78187979 Msa0705480:CDS
GAGAGGGAGTGGGTTGGTGG+TGG 0.348554 4_4:-78185908 None:intergenic
GAGTTTAATGGGTTTGTTCA+TGG 0.360107 4_4:-78185793 None:intergenic
TCCAACCCTGAGGTGTAATA+AGG 0.360223 4_4:-78187918 None:intergenic
GCATTGTTCTCACCCTTCTC+TGG 0.360849 4_4:-78187709 None:intergenic
GTGGTTATTGCGAGTTTAAT+GGG 0.367786 4_4:-78185804 None:intergenic
TGCGGCATGATTTGTAGAAT+TGG 0.382944 4_4:-78187600 None:intergenic
AGAGACGGAGGGAGAGGGAG+AGG 0.389282 4_4:-78185925 None:intergenic
TAGGAGGCATCAGTAAAATA+GGG 0.389338 4_4:+78188158 Msa0705480:exon
TGGATCTCTGAGCCGGCGTT+TGG 0.389693 4_4:-78185948 None:intergenic
AATGGGTTTGTTCATGGTTG+TGG 0.389877 4_4:-78185787 None:intergenic
GGTGTCTGGCATAGGGATTC+CGG 0.392391 4_4:+78186493 Msa0705480:CDS
ATACAGCAATTGTGTATGTT+TGG 0.397705 4_4:-78185755 None:intergenic
GTGTACCTGTGCAACACTTT+TGG 0.398459 4_4:+78188465 Msa0705480:three_prime_UTR
CGGAGGAGAGAGTGATGAAA+AGG 0.400293 4_4:-78185863 None:intergenic
GTAAATTACAAAGGGAGTAT+TGG 0.402573 4_4:-78188200 None:intergenic
ATATTTCTTGCATTAAGAAA+TGG 0.405081 4_4:+78188404 Msa0705480:three_prime_UTR
ATTTGTCTCAGAGGGTGTCT+TGG 0.408402 4_4:+78188013 Msa0705480:CDS
GGTTCTTGGCGATGGATTCA+TGG 0.410206 4_4:+78187438 Msa0705480:CDS
GCCACTGCTTGGTGTGCATC+AGG 0.413544 4_4:-78187493 None:intergenic
CGCAATAACCACTCTCTACA+TGG 0.415913 4_4:+78185815 Msa0705480:CDS
TCGGGAGGAGGATCGGTGTC+TGG 0.417550 4_4:+78186479 Msa0705480:CDS
AAAGAGTCCCACTCAATGTA+TGG 0.418443 4_4:+78188354 Msa0705480:three_prime_UTR
AAATCCAAGGGAAGGTTAGA+AGG 0.423435 4_4:+78188289 Msa0705480:three_prime_UTR
ATCGGGAAGACGGTTATTAC+CGG 0.426119 4_4:+78186713 Msa0705480:CDS
CGTTACTAGAGAGGGTTTCA+AGG 0.426351 4_4:-78186358 None:intergenic
AGAAGTCCTTATTACACCTC+AGG 0.426563 4_4:+78187912 Msa0705480:CDS
CTGGCCCACATTAGCAGAAC+CGG 0.431686 4_4:-78186732 None:intergenic
TGGAGAGCGGTGGGATTTGG+AGG 0.434100 4_4:-78186029 None:intergenic
TACAAATCATGCCGCATTGT+AGG 0.434437 4_4:+78187607 Msa0705480:CDS
GGATTGTGCGGTTACGAGAT+TGG 0.434680 4_4:-78186084 None:intergenic
TTATGGCAGGCAACTGGATC+GGG 0.434700 4_4:+78186461 Msa0705480:CDS
TACACCAACTTTACTACATC+AGG 0.437814 4_4:-78188447 None:intergenic
GGAGGATCGGTGTCTGGCAT+AGG 0.443078 4_4:+78186485 Msa0705480:CDS
CCGTCGCGCTCGGTGGTTGG+CGG 0.446645 4_4:-78186437 None:intergenic
TATTACCGGTTCTGCTAATG+TGG 0.450338 4_4:+78186727 Msa0705480:CDS
TTGGCAGCGGTTCTTGGCGA+TGG 0.452315 4_4:+78187430 Msa0705480:intron
CTAACCTTCTAACCTTCCCT+TGG 0.455386 4_4:-78188293 None:intergenic
ATTTCATTCAAGGAGGTGAA+TGG 0.457694 4_4:+78188082 Msa0705480:CDS
GACGGTTTATGGCAGGCAAC+TGG 0.460330 4_4:+78186455 Msa0705480:CDS
GTTTGGAGAGACGGAGGGAG+AGG 0.462161 4_4:-78185931 None:intergenic
AACCGCACAATCCATGGTTA+AGG 0.466294 4_4:+78186094 Msa0705480:CDS
TATCAAAGAAGGGGTTTATG+AGG 0.467273 4_4:+78186637 Msa0705480:CDS
GAAGCTGACGCCGGATGTTA+CGG 0.467729 4_4:+78186517 Msa0705480:CDS
CACCTCAGGGTTGGATGCCA+TGG 0.470349 4_4:+78187926 Msa0705480:CDS
TGGTAGAAGTAAATTACAAA+GGG 0.471086 4_4:-78188208 None:intergenic
GAGGGAGAGGGAGAGGGAGT+GGG 0.471728 4_4:-78185918 None:intergenic
GGTGTGTAAGAGAGGGGAGA+AGG 0.472425 4_4:+78186538 Msa0705480:CDS
ACAAATCCTGTACTCTGTGC+AGG 0.473024 4_4:-78187757 None:intergenic
ATGAGAGGTTGATGGCGGAT+TGG 0.475351 4_4:-78186058 None:intergenic
GAGACGGAGGGAGAGGGAGA+GGG 0.475792 4_4:-78185924 None:intergenic
CTGCCATAAACCGTCGCGCT+CGG 0.477771 4_4:-78186447 None:intergenic
GAAGCAAATAAAATATGATA+CGG 0.477990 4_4:+78188494 Msa0705480:three_prime_UTR
AAACCGTCGCGCTCGGTGGT+TGG 0.479503 4_4:-78186440 None:intergenic
ATTCGTTAGTATTTCGATGC+AGG 0.479611 4_4:-78186168 None:intergenic
GAGAGGGAGAGGGAGTGGGT+TGG 0.479722 4_4:-78185914 None:intergenic
GGGTTTATGAGGAAACCGTT+AGG 0.480051 4_4:+78186648 Msa0705480:CDS
AGAGTTGTAAGTAGTCATTC+CGG 0.480367 4_4:-78186756 None:intergenic
AAGCAAATAAAATATGATAC+GGG 0.480510 4_4:+78188495 Msa0705480:three_prime_UTR
TTTGTTATATATATCAAAGA+AGG 0.481343 4_4:+78186626 Msa0705480:CDS
ACATCCGGCGTCAGCTTCGC+CGG 0.481755 4_4:-78186512 None:intergenic
TTGTTATATATATCAAAGAA+GGG 0.484961 4_4:+78186627 Msa0705480:CDS
ATAGCGGTATTGACGGGAAG+AGG 0.485584 4_4:+78186603 Msa0705480:CDS
TCTGCTAATGTGGGCCAGCC+CGG 0.487185 4_4:+78186737 Msa0705480:CDS
TAGTATTTCGATGCAGGTGG+TGG 0.490505 4_4:-78186162 None:intergenic
GGTGGGATTTGGAGGGATAT+GGG 0.492141 4_4:-78186021 None:intergenic
GGCTGTTCCAGCAGTCGTAC+TGG 0.493558 4_4:-78186280 None:intergenic
GTGTGTAAGAGAGGGGAGAA+GGG 0.494610 4_4:+78186539 Msa0705480:CDS
TCCTTATTACACCTCAGGGT+TGG 0.495952 4_4:+78187917 Msa0705480:CDS
CAGGCAACTGGATCGGGAGG+AGG 0.496369 4_4:+78186467 Msa0705480:CDS
AACTGGATCGGGAGGAGGAT+CGG 0.498513 4_4:+78186472 Msa0705480:CDS
CTCTAGTAACGCTCTTGCCA+TGG 0.500275 4_4:+78186370 Msa0705480:CDS
GGGTTGCTTTACAGGCTTGT+TGG 0.502770 4_4:-78185968 None:intergenic
CGCCGGATAGCGGTATTGAC+GGG 0.503976 4_4:+78186597 Msa0705480:CDS
TGGCAGCGACGGTACGGTTA+CGG 0.505101 4_4:-78186142 None:intergenic
TCAGCGGAGAATTTCATTCA+AGG 0.506052 4_4:+78188072 Msa0705480:CDS
ACCGACCCTGCACAGAGTAC+AGG 0.506536 4_4:+78187751 Msa0705480:CDS
GTTATGGTGGCGAGTGGCGG+AGG 0.506640 4_4:-78185880 None:intergenic
GAGTTGTAAGTAGTCATTCC+GGG 0.507079 4_4:-78186755 None:intergenic
GGTTTATGAGGAAACCGTTA+GGG 0.507474 4_4:+78186649 Msa0705480:CDS
ACCGACAGCGTGTGTGTCGT+TGG 0.507485 4_4:-78186312 None:intergenic
TGGTTCTGATTTGTCTCAGA+GGG 0.508378 4_4:+78188005 Msa0705480:CDS
TTCTCTGGCTTGAGTTGTCT+AGG 0.508423 4_4:-78187694 None:intergenic
CTTCCAAGACTGTCAAATCC+TGG 0.512179 4_4:+78187666 Msa0705480:CDS
TTCCCGTCAATACCGCTATC+CGG 0.512214 4_4:-78186599 None:intergenic
GGTGGTGGTTGTGGTTATGG+TGG 0.512469 4_4:-78185893 None:intergenic
TGGAGAATTTGGAGAGCGGT+GGG 0.512568 4_4:-78186038 None:intergenic
GGAGAGCGGTGGGATTTGGA+GGG 0.515066 4_4:-78186028 None:intergenic
GAACCAGGATTTGACAGTCT+TGG 0.515146 4_4:-78187669 None:intergenic
TGGGACTCTTTCTAAGTATG+TGG 0.518936 4_4:-78188342 None:intergenic
TAGCTTACCAGTACGACTGC+TGG 0.519146 4_4:+78186273 Msa0705480:CDS
TTTGGAGAGACGGAGGGAGA+GGG 0.520847 4_4:-78185930 None:intergenic
ATTGGTAGATGAGAGGTTGA+TGG 0.520863 4_4:-78186066 None:intergenic
GTGGTTATGGTGGCGAGTGG+CGG 0.521091 4_4:-78185883 None:intergenic
TCTCGTAACCGCACAATCCA+TGG 0.524692 4_4:+78186088 Msa0705480:CDS
CTAATCTGAATGCCACTGCT+TGG 0.525437 4_4:-78187504 None:intergenic
TCCATGTGTTAAAGCGTCGT+TGG 0.528359 4_4:-78186213 None:intergenic
TGAGCCGGCGTTTGGAGAGA+CGG 0.530311 4_4:-78185940 None:intergenic
TTCGCATTGTTGTGGAAAGC+GGG 0.530551 4_4:-78185988 None:intergenic
GCGCCGGATAGCGGTATTGA+CGG 0.530888 4_4:+78186596 Msa0705480:CDS
CTCTTACACACCGTAACATC+CGG 0.535920 4_4:-78186527 None:intergenic
TTTATGGCAGGCAACTGGAT+CGG 0.536897 4_4:+78186460 Msa0705480:CDS
GGAGTCATCACAGTACTCAT+AGG 0.539961 4_4:+78188139 Msa0705480:CDS
AAGAGTCCCACTCAATGTAT+GGG 0.541468 4_4:+78188355 Msa0705480:three_prime_UTR
GAGGATCGGTGTCTGGCATA+GGG 0.541579 4_4:+78186486 Msa0705480:CDS
ATGGTAGAAGTAAATTACAA+AGG 0.542667 4_4:-78188209 None:intergenic
CGAGCGCGACGGTTTATGGC+AGG 0.543344 4_4:+78186448 Msa0705480:CDS
GAAGTCCTTATTACACCTCA+GGG 0.543999 4_4:+78187913 Msa0705480:CDS
TTGGAGAATTTGGAGAGCGG+TGG 0.547174 4_4:-78186039 None:intergenic
AACAATGCCATCACAGCTCA+TGG 0.547324 4_4:+78187724 Msa0705480:CDS
GGAAGCTGTTAATGCTGCGC+CGG 0.547905 4_4:+78186580 Msa0705480:CDS
GGCAAGAGCGTTACTAGAGA+GGG 0.548464 4_4:-78186366 None:intergenic
TGAGTTGTCTAGGACGAACC+AGG 0.550190 4_4:-78187684 None:intergenic
TAATGGAACTGAGGATTACA+TGG 0.550296 4_4:+78187798 Msa0705480:CDS
TAACTCGTTACATGTTCAGC+GGG 0.553913 4_4:-78188048 None:intergenic
GGTTCTACCATGAGCTGTGA+TGG 0.554105 4_4:-78187731 None:intergenic
GAATTTGAGAATACTGGTGC+TGG 0.555979 4_4:+78187985 Msa0705480:CDS
AAAACTATTTGGGAAGGCCA+TGG 0.556313 4_4:+78187851 Msa0705480:CDS
GGAAACCGTTAGGGTTCCGT+TGG 0.557005 4_4:+78186658 Msa0705480:CDS
TTGGACCAAAAGTGTTGCAC+AGG 0.557520 4_4:-78188470 None:intergenic
ACCACGTTTCTCTTCTCCAA+CGG 0.557929 4_4:-78186674 None:intergenic
AGTGATGATTCGCATTGTTG+TGG 0.559604 4_4:-78185996 None:intergenic
AAATTGCCCCATACATTGAG+TGG 0.564468 4_4:-78188362 None:intergenic
ATTCGCATTGTTGTGGAAAG+CGG 0.565903 4_4:-78185989 None:intergenic
CTTCTCCAACGGAACCCTAA+CGG 0.568649 4_4:-78186663 None:intergenic
CAATTTCTAGAGTGGTTGTG+TGG 0.570000 4_4:+78188584 Msa0705480:three_prime_UTR
AGTTATCAGCACATCGTGGT+AGG 0.571556 4_4:+78188118 Msa0705480:CDS
TCCAACGACGCTTTAACACA+TGG 0.571581 4_4:+78186212 Msa0705480:CDS
CGTTAGTATTTCGATGCAGG+TGG 0.572756 4_4:-78186165 None:intergenic
AGGTGGTGGCAGCGACGGTA+CGG 0.575966 4_4:-78186148 None:intergenic
GATGTTACGGTGTGTAAGAG+AGG 0.576539 4_4:+78186530 Msa0705480:CDS
GATGCAGGTGGTGGCAGCGA+CGG 0.578819 4_4:-78186153 None:intergenic
CCATAAACCGTCGCGCTCGG+TGG 0.579333 4_4:-78186444 None:intergenic
TAGACAACTCAAGCCAGAGA+AGG 0.581118 4_4:+78187696 Msa0705480:CDS
AAATCAAAGACGCTCGAGCA+TGG 0.581386 4_4:+78186237 Msa0705480:CDS
GTTAATGCTGCGCCGGATAG+CGG 0.582563 4_4:+78186587 Msa0705480:CDS
GTTCTAGAATACTCCTTCCA+TGG 0.582820 4_4:-78187868 None:intergenic
TGTAAGTAGTCATTCCGGGC+TGG 0.582837 4_4:-78186751 None:intergenic
CTGGTTCTGATTTGTCTCAG+AGG 0.582934 4_4:+78188004 Msa0705480:CDS
ATGTTACGGTGTGTAAGAGA+GGG 0.587954 4_4:+78186531 Msa0705480:CDS
GGCTTGTTGGATCTCTGAGC+CGG 0.589953 4_4:-78185955 None:intergenic
AGGTGATGGAATCGGGAAGA+CGG 0.589955 4_4:+78186703 Msa0705480:CDS
GGTAGATGAGAGGTTGATGG+CGG 0.590167 4_4:-78186063 None:intergenic
TGGCAGGCAACTGGATCGGG+AGG 0.590980 4_4:+78186464 Msa0705480:CDS
TCCTGTACTCTGTGCAGGGT+CGG 0.591729 4_4:-78187752 None:intergenic
TGGCAAGAGCGTTACTAGAG+AGG 0.593826 4_4:-78186367 None:intergenic
TGGCGATGGATTCATGGCAA+AGG 0.597408 4_4:+78187444 Msa0705480:CDS
CTGTTTGATTAATGGAACTG+AGG 0.603136 4_4:+78187789 Msa0705480:CDS
AGACAACTCAAGCCAGAGAA+GGG 0.603890 4_4:+78187697 Msa0705480:CDS
GTGACCTGATGTAGTAAAGT+TGG 0.604212 4_4:+78188443 Msa0705480:three_prime_UTR
CAAATCCTGTACTCTGTGCA+GGG 0.606314 4_4:-78187756 None:intergenic
GTTGTGGTTATGGTGGCGAG+TGG 0.607669 4_4:-78185886 None:intergenic
CTATTTGGGAAGGCCATGGA+AGG 0.608614 4_4:+78187855 Msa0705480:CDS
CCGCCAACCACCGAGCGCGA+CGG 0.609123 4_4:+78186437 Msa0705480:CDS
GAGAGAAGCCATGTAGAGAG+TGG 0.610542 4_4:-78185823 None:intergenic
GCCAACGACACACACGCTGT+CGG 0.610858 4_4:+78186311 Msa0705480:CDS
ATTACCGGTTCTGCTAATGT+GGG 0.611976 4_4:+78186728 Msa0705480:CDS
AGCCTTAACCATGGATTGTG+CGG 0.612738 4_4:-78186096 None:intergenic
AATTGCCCCATACATTGAGT+GGG 0.616087 4_4:-78188361 None:intergenic
GTTACTAGAGAGGGTTTCAA+GGG 0.617462 4_4:-78186357 None:intergenic
GGAGAAGGGTTGTTATAAGA+CGG 0.618703 4_4:+78186553 Msa0705480:CDS
ATCTAGAATAGCCTTAACCA+TGG 0.619598 4_4:-78186105 None:intergenic
AGTGCAAAGTTACCACTCCA+TGG 0.621412 4_4:-78187943 None:intergenic
GATTCCGGCGAAGCTGACGC+CGG 0.623725 4_4:+78186508 Msa0705480:CDS
TCCTGATGCACACCAAGCAG+TGG 0.624479 4_4:+78187492 Msa0705480:CDS
TGTTATATATATCAAAGAAG+GGG 0.624851 4_4:+78186628 Msa0705480:CDS
GTCATCACAGTACTCATAGG+AGG 0.626796 4_4:+78188142 Msa0705480:CDS
AGAAGCTTAGCATAACATAG+TGG 0.630188 4_4:-78188523 None:intergenic
TTACGAGATTGGTAGATGAG+AGG 0.632651 4_4:-78186073 None:intergenic
AGGAGGCATCAGTAAAATAG+GGG 0.635064 4_4:+78188159 Msa0705480:exon
CCGGCGTTTGGAGAGACGGA+GGG 0.640758 4_4:-78185936 None:intergenic
CCCTCCGTCTCTCCAAACGC+CGG 0.643281 4_4:+78185936 Msa0705480:CDS
GCAGTCGTACTGGTAAGCTA+AGG 0.643787 4_4:-78186270 None:intergenic
ATGGAAAAGACACGTCGTTG+TGG 0.643842 4_4:+78186411 Msa0705480:CDS
CAGGGTTGGATGCCATGGAG+TGG 0.651700 4_4:+78187931 Msa0705480:CDS
GGGTTGTTATAAGACGGTGC+AGG 0.652998 4_4:+78186559 Msa0705480:CDS
GCCGGCGTTTGGAGAGACGG+AGG 0.656925 4_4:-78185937 None:intergenic
CTAACGATCGAAAACACAGC+AGG 0.657735 4_4:+78187469 Msa0705480:CDS
AGAGTCCCACTCAATGTATG+GGG 0.659178 4_4:+78188356 Msa0705480:three_prime_UTR
GTCGTACTGGTAAGCTAAGG+CGG 0.661087 4_4:-78186267 None:intergenic
ACTTACAACTCTGCCACCGT+AGG 0.667310 4_4:+78186767 Msa0705480:CDS
GCGGAGAATTTCATTCAAGG+AGG 0.669409 4_4:+78188075 Msa0705480:CDS
ATAACTCGTTACATGTTCAG+CGG 0.683767 4_4:-78188049 None:intergenic
TGTTACGGTGTGTAAGAGAG+GGG 0.691033 4_4:+78186532 Msa0705480:CDS
AGCAAATAAAATATGATACG+GGG 0.691686 4_4:+78188496 Msa0705480:three_prime_UTR
GGTACGGTTACGGCTAGCTG+AGG 0.696882 4_4:-78186132 None:intergenic
GGATTGGAGAATTTGGAGAG+CGG 0.706980 4_4:-78186042 None:intergenic
CTCCATGGCATCCAACCCTG+AGG 0.708740 4_4:-78187928 None:intergenic
ACATGTAACGAGTTATTCAG+CGG 0.718970 4_4:+78188056 Msa0705480:CDS
AATCTACATTGCCTACAATG+CGG 0.720239 4_4:-78187618 None:intergenic
GTACTGGTAAGCTAAGGCGG+CGG 0.750479 4_4:-78186264 None:intergenic
TCCGTTGGAGAAGAGAAACG+TGG 0.756065 4_4:+78186673 Msa0705480:CDS
CGTCGTTGGAGAGAGAAATG+CGG 0.756471 4_4:-78186199 None:intergenic
TCTCAGTTATCAGCACATCG+TGG 0.761406 4_4:+78188114 Msa0705480:CDS
AACGTCGTAGGAAAACACCA+TGG 0.767788 4_4:-78186387 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTGTTATATATATCAAAGA+AGG + chr4_4:78186626-78186645 Msa0705480:CDS 15.0%
!! TTGTTATATATATCAAAGAA+GGG + chr4_4:78186627-78186646 Msa0705480:CDS 15.0%
!! AATAAAAATATAGTTACCTA+CGG - chr4_4:78186786-78186805 None:intergenic 15.0%
!!! ATCATACTTTTTTTTTTTGA+AGG + chr4_4:78186822-78186841 Msa0705480:intron 15.0%
!! TAAATACATATACTAATCTT+CGG - chr4_4:78186992-78187011 None:intergenic 15.0%
!! TATTGTAGTATTGTTAATAT+TGG + chr4_4:78187392-78187411 Msa0705480:intron 15.0%
!! ATTGTAGTATTGTTAATATT+GGG + chr4_4:78187393-78187412 Msa0705480:intron 15.0%
!! GTTATTATTGTATTAGTAAA+TGG - chr4_4:78188231-78188250 None:intergenic 15.0%
!! TGTTATATATATCAAAGAAG+GGG + chr4_4:78186628-78186647 Msa0705480:CDS 20.0%
!! ATGCATAATAAGTGTAAAAT+CGG + chr4_4:78186907-78186926 Msa0705480:intron 20.0%
!! AAATACATATACTAATCTTC+GGG - chr4_4:78186991-78187010 None:intergenic 20.0%
!! GATTGAATTTATATACTAGA+AGG + chr4_4:78187097-78187116 Msa0705480:intron 20.0%
!!! ACATTTAAAGTATTCAAAAC+TGG - chr4_4:78187124-78187143 None:intergenic 20.0%
!!! ATTGAGAATTGTGAATTTTT+AGG + chr4_4:78187544-78187563 Msa0705480:CDS 20.0%
!!! AAATAGTTTTTATGCACTTT+AGG - chr4_4:78187841-78187860 None:intergenic 20.0%
!! TAAAGTGCATAAAAACTATT+TGG + chr4_4:78187840-78187859 Msa0705480:CDS 20.0%
!! AAAGTGCATAAAAACTATTT+GGG + chr4_4:78187841-78187860 Msa0705480:CDS 20.0%
!! ATATTTCTTGCATTAAGAAA+TGG + chr4_4:78188404-78188423 Msa0705480:three_prime_UTR 20.0%
!!! TCATATTTTATTTGCTTCAT+TGG - chr4_4:78188492-78188511 None:intergenic 20.0%
!! GAAGCAAATAAAATATGATA+CGG + chr4_4:78188494-78188513 Msa0705480:three_prime_UTR 20.0%
!! AAGCAAATAAAATATGATAC+GGG + chr4_4:78188495-78188514 Msa0705480:three_prime_UTR 20.0%
!! TTGTAAAAAAATATAAGCAG+TGG - chr4_4:78188567-78188586 None:intergenic 20.0%
!!! TTTTTTTACAATTTCTAGAG+TGG + chr4_4:78188576-78188595 Msa0705480:three_prime_UTR 20.0%
! TAAAATCGGTATTTAAACTC+CGG + chr4_4:78186921-78186940 Msa0705480:intron 25.0%
!!! CTGTTTTTTTTTTTTGTGTC+CGG - chr4_4:78186943-78186962 None:intergenic 25.0%
! TACTAAAAGATGACCTAAAA+AGG + chr4_4:78187057-78187076 Msa0705480:intron 25.0%
!! ACAAATGAATCAACCTTTTT+AGG - chr4_4:78187073-78187092 None:intergenic 25.0%
!!! TTGGGTTATTTGATTTTTGT+TGG + chr4_4:78187411-78187430 Msa0705480:intron 25.0%
! TGGTAGAAGTAAATTACAAA+GGG - chr4_4:78188211-78188230 None:intergenic 25.0%
! ATGGTAGAAGTAAATTACAA+AGG - chr4_4:78188212-78188231 None:intergenic 25.0%
! ATTTCAATAGCAATCGAAAA+AGG + chr4_4:78188260-78188279 Msa0705480:three_prime_UTR 25.0%
! TTTCAATAGCAATCGAAAAA+GGG + chr4_4:78188261-78188280 Msa0705480:three_prime_UTR 25.0%
! AAAAAGGGAAAAAAAATCCA+AGG + chr4_4:78188276-78188295 Msa0705480:three_prime_UTR 25.0%
! AAAAGGGAAAAAAAATCCAA+GGG + chr4_4:78188277-78188296 Msa0705480:three_prime_UTR 25.0%
! AGCAAATAAAATATGATACG+GGG + chr4_4:78188496-78188515 Msa0705480:three_prime_UTR 25.0%
AAAAATATAGTTACCTACGG+TGG - chr4_4:78186783-78186802 None:intergenic 30.0%
TTATGCATTGTCCTTAACAA+CGG - chr4_4:78186895-78186914 None:intergenic 30.0%
AGCACATAATTCTTACAATG+AGG - chr4_4:78187247-78187266 None:intergenic 30.0%
CTTTCATGCATACATACTTA+AGG - chr4_4:78187355-78187374 None:intergenic 30.0%
!! TATTTGATTTTTGTTGGCAG+CGG + chr4_4:78187417-78187436 Msa0705480:intron 30.0%
! GGCAATGTAGATTTTATCTT+TGG + chr4_4:78187628-78187647 Msa0705480:CDS 30.0%
TTCCAGAACTGTTTGATTAA+TGG + chr4_4:78187781-78187800 Msa0705480:CDS 30.0%
TTCCATTAATCAAACAGTTC+TGG - chr4_4:78187786-78187805 None:intergenic 30.0%
TGCATAAAAACTATTTGGGA+AGG + chr4_4:78187845-78187864 Msa0705480:CDS 30.0%
GCACTTAAGACACTTTATTA+TGG + chr4_4:78187961-78187980 Msa0705480:CDS 30.0%
TATGGAGAATTTGAGAATAC+TGG + chr4_4:78187979-78187998 Msa0705480:CDS 30.0%
! GTAAATTACAAAGGGAGTAT+TGG - chr4_4:78188203-78188222 None:intergenic 30.0%
!! GAGTTTAATGGGTTTGTTCA+TGG - chr4_4:78185796-78185815 None:intergenic 35.0%
GTGGTTATTGCGAGTTTAAT+GGG - chr4_4:78185807-78185826 None:intergenic 35.0%
AGTGGTTATTGCGAGTTTAA+TGG - chr4_4:78185808-78185827 None:intergenic 35.0%
! ATCTAGAATAGCCTTAACCA+TGG - chr4_4:78186108-78186127 None:intergenic 35.0%
ATTCGTTAGTATTTCGATGC+AGG - chr4_4:78186171-78186190 None:intergenic 35.0%
TATCAAAGAAGGGGTTTATG+AGG + chr4_4:78186637-78186656 Msa0705480:CDS 35.0%
! AAGAGAAACGTGGTGTTTTT+AGG + chr4_4:78186683-78186702 Msa0705480:CDS 35.0%
!!! GTGTTTTTAGGTGATGGAAT+CGG + chr4_4:78186695-78186714 Msa0705480:CDS 35.0%
!!! TGTTTTTAGGTGATGGAATC+GGG + chr4_4:78186696-78186715 Msa0705480:CDS 35.0%
AGAGTTGTAAGTAGTCATTC+CGG - chr4_4:78186759-78186778 None:intergenic 35.0%
TTATCTTAGCTCCGTTGTTA+AGG + chr4_4:78186881-78186900 Msa0705480:intron 35.0%
ACATATACTAATCTTCGGGT+GGG - chr4_4:78186987-78187006 None:intergenic 35.0%
TACATATACTAATCTTCGGG+TGG - chr4_4:78186988-78187007 None:intergenic 35.0%
AGTATGTATGCATGAAAGCA+TGG + chr4_4:78187357-78187376 Msa0705480:intron 35.0%
AATCTACATTGCCTACAATG+CGG - chr4_4:78187621-78187640 None:intergenic 35.0%
CTGTTTGATTAATGGAACTG+AGG + chr4_4:78187789-78187808 Msa0705480:CDS 35.0%
TAATGGAACTGAGGATTACA+TGG + chr4_4:78187798-78187817 Msa0705480:CDS 35.0%
ATAACTCGTTACATGTTCAG+CGG - chr4_4:78188052-78188071 None:intergenic 35.0%
ACATGTAACGAGTTATTCAG+CGG + chr4_4:78188056-78188075 Msa0705480:CDS 35.0%
ATTTCATTCAAGGAGGTGAA+TGG + chr4_4:78188082-78188101 Msa0705480:CDS 35.0%
!! ATAGGAGGCATCAGTAAAAT+AGG + chr4_4:78188157-78188176 Msa0705480:exon 35.0%
!! TAGGAGGCATCAGTAAAATA+GGG + chr4_4:78188158-78188177 Msa0705480:exon 35.0%
! TGTATGGGGCAATTTGAAAT+TGG + chr4_4:78188370-78188389 Msa0705480:three_prime_UTR 35.0%
TACACCAACTTTACTACATC+AGG - chr4_4:78188450-78188469 None:intergenic 35.0%
AGAAGCTTAGCATAACATAG+TGG - chr4_4:78188526-78188545 None:intergenic 35.0%
! AATGGGTTTGTTCATGGTTG+TGG - chr4_4:78185790-78185809 None:intergenic 40.0%
ATTCGCATTGTTGTGGAAAG+CGG - chr4_4:78185992-78186011 None:intergenic 40.0%
AGTGATGATTCGCATTGTTG+TGG - chr4_4:78185999-78186018 None:intergenic 40.0%
ATTGGTAGATGAGAGGTTGA+TGG - chr4_4:78186069-78186088 None:intergenic 40.0%
TTACGAGATTGGTAGATGAG+AGG - chr4_4:78186076-78186095 None:intergenic 40.0%
GTTACTAGAGAGGGTTTCAA+GGG - chr4_4:78186360-78186379 None:intergenic 40.0%
! GTGTTTTCCTACGACGTTTA+TGG + chr4_4:78186392-78186411 Msa0705480:CDS 40.0%
! GTCTTTTCCATAAACGTCGT+AGG - chr4_4:78186402-78186421 None:intergenic 40.0%
ATGTTACGGTGTGTAAGAGA+GGG + chr4_4:78186531-78186550 Msa0705480:CDS 40.0%
GGAGAAGGGTTGTTATAAGA+CGG + chr4_4:78186553-78186572 Msa0705480:CDS 40.0%
GGTTTATGAGGAAACCGTTA+GGG + chr4_4:78186649-78186668 Msa0705480:CDS 40.0%
!!! AACGTGGTGTTTTTAGGTGA+TGG + chr4_4:78186689-78186708 Msa0705480:CDS 40.0%
!! TATTACCGGTTCTGCTAATG+TGG + chr4_4:78186727-78186746 Msa0705480:CDS 40.0%
!! ATTACCGGTTCTGCTAATGT+GGG + chr4_4:78186728-78186747 Msa0705480:CDS 40.0%
GAGTTGTAAGTAGTCATTCC+GGG - chr4_4:78186758-78186777 None:intergenic 40.0%
GTAACCTTTGTATGCTTGCT+AGG + chr4_4:78187142-78187161 Msa0705480:intron 40.0%
! TTTGTATGCTTGCTAGGCAT+GGG + chr4_4:78187148-78187167 Msa0705480:intron 40.0%
CTTAAGGCATGTGAAAGTGA+AGG - chr4_4:78187339-78187358 None:intergenic 40.0%
! TGCGGCATGATTTGTAGAAT+TGG - chr4_4:78187603-78187622 None:intergenic 40.0%
TACAAATCATGCCGCATTGT+AGG + chr4_4:78187607-78187626 Msa0705480:CDS 40.0%
AAAACTATTTGGGAAGGCCA+TGG + chr4_4:78187851-78187870 Msa0705480:CDS 40.0%
!! GTTCTAGAATACTCCTTCCA+TGG - chr4_4:78187871-78187890 None:intergenic 40.0%
AGAAGTCCTTATTACACCTC+AGG + chr4_4:78187912-78187931 Msa0705480:CDS 40.0%
GAAGTCCTTATTACACCTCA+GGG + chr4_4:78187913-78187932 Msa0705480:CDS 40.0%
GAATTTGAGAATACTGGTGC+TGG + chr4_4:78187985-78188004 Msa0705480:CDS 40.0%
!! TGGTTCTGATTTGTCTCAGA+GGG + chr4_4:78188005-78188024 Msa0705480:CDS 40.0%
TAACTCGTTACATGTTCAGC+GGG - chr4_4:78188051-78188070 None:intergenic 40.0%
TCAGCGGAGAATTTCATTCA+AGG + chr4_4:78188072-78188091 Msa0705480:CDS 40.0%
!! AGGAGGCATCAGTAAAATAG+GGG + chr4_4:78188159-78188178 Msa0705480:exon 40.0%
GGGAAAAAAAATCCAAGGGA+AGG + chr4_4:78188281-78188300 Msa0705480:three_prime_UTR 40.0%
AAATCCAAGGGAAGGTTAGA+AGG + chr4_4:78188289-78188308 Msa0705480:three_prime_UTR 40.0%
TGGGACTCTTTCTAAGTATG+TGG - chr4_4:78188345-78188364 None:intergenic 40.0%
AAAGAGTCCCACTCAATGTA+TGG + chr4_4:78188354-78188373 Msa0705480:three_prime_UTR 40.0%
AAGAGTCCCACTCAATGTAT+GGG + chr4_4:78188355-78188374 Msa0705480:three_prime_UTR 40.0%
AATTGCCCCATACATTGAGT+GGG - chr4_4:78188364-78188383 None:intergenic 40.0%
AAATTGCCCCATACATTGAG+TGG - chr4_4:78188365-78188384 None:intergenic 40.0%
GTGACCTGATGTAGTAAAGT+TGG + chr4_4:78188443-78188462 Msa0705480:three_prime_UTR 40.0%
CGCAATAACCACTCTCTACA+TGG + chr4_4:78185815-78185834 Msa0705480:CDS 45.0%
TTCGCATTGTTGTGGAAAGC+GGG - chr4_4:78185991-78186010 None:intergenic 45.0%
GGATTGGAGAATTTGGAGAG+CGG - chr4_4:78186045-78186064 None:intergenic 45.0%
!! TGATGGCGGATTGGAGAATT+TGG - chr4_4:78186052-78186071 None:intergenic 45.0%
AACCGCACAATCCATGGTTA+AGG + chr4_4:78186094-78186113 Msa0705480:CDS 45.0%
! AGCCTTAACCATGGATTGTG+CGG - chr4_4:78186099-78186118 None:intergenic 45.0%
TAGTATTTCGATGCAGGTGG+TGG - chr4_4:78186165-78186184 None:intergenic 45.0%
CGTTAGTATTTCGATGCAGG+TGG - chr4_4:78186168-78186187 None:intergenic 45.0%
TCCAACGACGCTTTAACACA+TGG + chr4_4:78186212-78186231 Msa0705480:CDS 45.0%
!! TCCATGTGTTAAAGCGTCGT+TGG - chr4_4:78186216-78186235 None:intergenic 45.0%
AAATCAAAGACGCTCGAGCA+TGG + chr4_4:78186237-78186256 Msa0705480:CDS 45.0%
CGTTACTAGAGAGGGTTTCA+AGG - chr4_4:78186361-78186380 None:intergenic 45.0%
AACGTCGTAGGAAAACACCA+TGG - chr4_4:78186390-78186409 None:intergenic 45.0%
ATGGAAAAGACACGTCGTTG+TGG + chr4_4:78186411-78186430 Msa0705480:CDS 45.0%
TTTATGGCAGGCAACTGGAT+CGG + chr4_4:78186460-78186479 Msa0705480:CDS 45.0%
CTCTTACACACCGTAACATC+CGG - chr4_4:78186530-78186549 None:intergenic 45.0%
GATGTTACGGTGTGTAAGAG+AGG + chr4_4:78186530-78186549 Msa0705480:CDS 45.0%
TGTTACGGTGTGTAAGAGAG+GGG + chr4_4:78186532-78186551 Msa0705480:CDS 45.0%
GGGTTTATGAGGAAACCGTT+AGG + chr4_4:78186648-78186667 Msa0705480:CDS 45.0%
ACCACGTTTCTCTTCTCCAA+CGG - chr4_4:78186677-78186696 None:intergenic 45.0%
ATCGGGAAGACGGTTATTAC+CGG + chr4_4:78186713-78186732 Msa0705480:CDS 45.0%
CATGCCTAGCAAGCATACAA+AGG - chr4_4:78187149-78187168 None:intergenic 45.0%
! CTTTGTATGCTTGCTAGGCA+TGG + chr4_4:78187147-78187166 Msa0705480:intron 45.0%
! TTGTATGCTTGCTAGGCATG+GGG + chr4_4:78187149-78187168 Msa0705480:intron 45.0%
! TTTTTGTTGGCAGCGGTTCT+TGG + chr4_4:78187424-78187443 Msa0705480:intron 45.0%
CTAACGATCGAAAACACAGC+AGG + chr4_4:78187469-78187488 Msa0705480:CDS 45.0%
CTAATCTGAATGCCACTGCT+TGG - chr4_4:78187507-78187526 None:intergenic 45.0%
CTTCCAAGACTGTCAAATCC+TGG + chr4_4:78187666-78187685 Msa0705480:CDS 45.0%
GAACCAGGATTTGACAGTCT+TGG - chr4_4:78187672-78187691 None:intergenic 45.0%
! TTCTCTGGCTTGAGTTGTCT+AGG - chr4_4:78187697-78187716 None:intergenic 45.0%
TAGACAACTCAAGCCAGAGA+AGG + chr4_4:78187696-78187715 Msa0705480:CDS 45.0%
AGACAACTCAAGCCAGAGAA+GGG + chr4_4:78187697-78187716 Msa0705480:CDS 45.0%
AACAATGCCATCACAGCTCA+TGG + chr4_4:78187724-78187743 Msa0705480:CDS 45.0%
CAAATCCTGTACTCTGTGCA+GGG - chr4_4:78187759-78187778 None:intergenic 45.0%
ACAAATCCTGTACTCTGTGC+AGG - chr4_4:78187760-78187779 None:intergenic 45.0%
TCCTTATTACACCTCAGGGT+TGG + chr4_4:78187917-78187936 Msa0705480:CDS 45.0%
TCCAACCCTGAGGTGTAATA+AGG - chr4_4:78187921-78187940 None:intergenic 45.0%
AGTGCAAAGTTACCACTCCA+TGG - chr4_4:78187946-78187965 None:intergenic 45.0%
!! CTGGTTCTGATTTGTCTCAG+AGG + chr4_4:78188004-78188023 Msa0705480:CDS 45.0%
!! ATTTGTCTCAGAGGGTGTCT+TGG + chr4_4:78188013-78188032 Msa0705480:CDS 45.0%
GCGGAGAATTTCATTCAAGG+AGG + chr4_4:78188075-78188094 Msa0705480:CDS 45.0%
TCTCAGTTATCAGCACATCG+TGG + chr4_4:78188114-78188133 Msa0705480:CDS 45.0%
AGTTATCAGCACATCGTGGT+AGG + chr4_4:78188118-78188137 Msa0705480:CDS 45.0%
GGAGTCATCACAGTACTCAT+AGG + chr4_4:78188139-78188158 Msa0705480:CDS 45.0%
GTCATCACAGTACTCATAGG+AGG + chr4_4:78188142-78188161 Msa0705480:CDS 45.0%
CTAACCTTCTAACCTTCCCT+TGG - chr4_4:78188296-78188315 None:intergenic 45.0%
AGAGTCCCACTCAATGTATG+GGG + chr4_4:78188356-78188375 Msa0705480:three_prime_UTR 45.0%
! GTGTACCTGTGCAACACTTT+TGG + chr4_4:78188465-78188484 Msa0705480:three_prime_UTR 45.0%
!! TTGGACCAAAAGTGTTGCAC+AGG - chr4_4:78188473-78188492 None:intergenic 45.0%
GAGAGAAGCCATGTAGAGAG+TGG - chr4_4:78185826-78185845 None:intergenic 50.0%
CGGAGGAGAGAGTGATGAAA+AGG - chr4_4:78185866-78185885 None:intergenic 50.0%
!! GTTGGTGGTGGTTGTGGTTA+TGG - chr4_4:78185899-78185918 None:intergenic 50.0%
! GGGTTGCTTTACAGGCTTGT+TGG - chr4_4:78185971-78185990 None:intergenic 50.0%
!! TGGAAAGCGGGTTGCTTTAC+AGG - chr4_4:78185979-78185998 None:intergenic 50.0%
GGTGGGATTTGGAGGGATAT+GGG - chr4_4:78186024-78186043 None:intergenic 50.0%
ATTTGGAGAGCGGTGGGATT+TGG - chr4_4:78186035-78186054 None:intergenic 50.0%
TGGAGAATTTGGAGAGCGGT+GGG - chr4_4:78186041-78186060 None:intergenic 50.0%
TTGGAGAATTTGGAGAGCGG+TGG - chr4_4:78186042-78186061 None:intergenic 50.0%
!! ATGAGAGGTTGATGGCGGAT+TGG - chr4_4:78186061-78186080 None:intergenic 50.0%
!! GGTAGATGAGAGGTTGATGG+CGG - chr4_4:78186066-78186085 None:intergenic 50.0%
GGATTGTGCGGTTACGAGAT+TGG - chr4_4:78186087-78186106 None:intergenic 50.0%
TCTCGTAACCGCACAATCCA+TGG + chr4_4:78186088-78186107 Msa0705480:CDS 50.0%
CGTCGTTGGAGAGAGAAATG+CGG - chr4_4:78186202-78186221 None:intergenic 50.0%
! GTCGTACTGGTAAGCTAAGG+CGG - chr4_4:78186270-78186289 None:intergenic 50.0%
! GCAGTCGTACTGGTAAGCTA+AGG - chr4_4:78186273-78186292 None:intergenic 50.0%
TAGCTTACCAGTACGACTGC+TGG + chr4_4:78186273-78186292 Msa0705480:CDS 50.0%
! GTGTGTCGTTGGCGTATTTC+AGG - chr4_4:78186304-78186323 None:intergenic 50.0%
!! GGCAAGAGCGTTACTAGAGA+GGG - chr4_4:78186369-78186388 None:intergenic 50.0%
!! TGGCAAGAGCGTTACTAGAG+AGG - chr4_4:78186370-78186389 None:intergenic 50.0%
CTCTAGTAACGCTCTTGCCA+TGG + chr4_4:78186370-78186389 Msa0705480:CDS 50.0%
TTATGGCAGGCAACTGGATC+GGG + chr4_4:78186461-78186480 Msa0705480:CDS 50.0%
GTGTGTAAGAGAGGGGAGAA+GGG + chr4_4:78186539-78186558 Msa0705480:CDS 50.0%
GGGTTGTTATAAGACGGTGC+AGG + chr4_4:78186559-78186578 Msa0705480:CDS 50.0%
TTCCCGTCAATACCGCTATC+CGG - chr4_4:78186602-78186621 None:intergenic 50.0%
!! ATAGCGGTATTGACGGGAAG+AGG + chr4_4:78186603-78186622 Msa0705480:CDS 50.0%
CTTCTCCAACGGAACCCTAA+CGG - chr4_4:78186666-78186685 None:intergenic 50.0%
TCCGTTGGAGAAGAGAAACG+TGG + chr4_4:78186673-78186692 Msa0705480:CDS 50.0%
!! AGGTGATGGAATCGGGAAGA+CGG + chr4_4:78186703-78186722 Msa0705480:CDS 50.0%
TGTAAGTAGTCATTCCGGGC+TGG - chr4_4:78186754-78186773 None:intergenic 50.0%
ACTTACAACTCTGCCACCGT+AGG + chr4_4:78186767-78186786 Msa0705480:CDS 50.0%
! GGTTCTTGGCGATGGATTCA+TGG + chr4_4:78187438-78187457 Msa0705480:CDS 50.0%
! TGGCGATGGATTCATGGCAA+AGG + chr4_4:78187444-78187463 Msa0705480:CDS 50.0%
! TGAGTTGTCTAGGACGAACC+AGG - chr4_4:78187687-78187706 None:intergenic 50.0%
GCATTGTTCTCACCCTTCTC+TGG - chr4_4:78187712-78187731 None:intergenic 50.0%
GGTTCTACCATGAGCTGTGA+TGG - chr4_4:78187734-78187753 None:intergenic 50.0%
CTATTTGGGAAGGCCATGGA+AGG + chr4_4:78187855-78187874 Msa0705480:CDS 50.0%
! GTTGTGGTTATGGTGGCGAG+TGG - chr4_4:78185889-78185908 None:intergenic 55.0%
! GGTGGTGGTTGTGGTTATGG+TGG - chr4_4:78185896-78185915 None:intergenic 55.0%
TTTGGAGAGACGGAGGGAGA+GGG - chr4_4:78185933-78185952 None:intergenic 55.0%
!! GGCTTGTTGGATCTCTGAGC+CGG - chr4_4:78185958-78185977 None:intergenic 55.0%
CGGTGGGATTTGGAGGGATA+TGG - chr4_4:78186025-78186044 None:intergenic 55.0%
! GTACTGGTAAGCTAAGGCGG+CGG - chr4_4:78186267-78186286 None:intergenic 55.0%
GACGGTTTATGGCAGGCAAC+TGG + chr4_4:78186455-78186474 Msa0705480:CDS 55.0%
AACTGGATCGGGAGGAGGAT+CGG + chr4_4:78186472-78186491 Msa0705480:CDS 55.0%
! GAGGATCGGTGTCTGGCATA+GGG + chr4_4:78186486-78186505 Msa0705480:CDS 55.0%
GGTGTCTGGCATAGGGATTC+CGG + chr4_4:78186493-78186512 Msa0705480:CDS 55.0%
GAAGCTGACGCCGGATGTTA+CGG + chr4_4:78186517-78186536 Msa0705480:CDS 55.0%
GGTGTGTAAGAGAGGGGAGA+AGG + chr4_4:78186538-78186557 Msa0705480:CDS 55.0%
GGAAGCTGTTAATGCTGCGC+CGG + chr4_4:78186580-78186599 Msa0705480:CDS 55.0%
GTTAATGCTGCGCCGGATAG+CGG + chr4_4:78186587-78186606 Msa0705480:CDS 55.0%
GGAAACCGTTAGGGTTCCGT+TGG + chr4_4:78186658-78186677 Msa0705480:CDS 55.0%
CTGGCCCACATTAGCAGAAC+CGG - chr4_4:78186735-78186754 None:intergenic 55.0%
TCCTGATGCACACCAAGCAG+TGG + chr4_4:78187492-78187511 Msa0705480:CDS 55.0%
TCCTGTACTCTGTGCAGGGT+CGG - chr4_4:78187755-78187774 None:intergenic 55.0%
! GTGGTTATGGTGGCGAGTGG+CGG - chr4_4:78185886-78185905 None:intergenic 60.0%
!! GAGTGGGTTGGTGGTGGTTG+TGG - chr4_4:78185905-78185924 None:intergenic 60.0%
GTTTGGAGAGACGGAGGGAG+AGG - chr4_4:78185934-78185953 None:intergenic 60.0%
TGAGCCGGCGTTTGGAGAGA+CGG - chr4_4:78185943-78185962 None:intergenic 60.0%
TGGATCTCTGAGCCGGCGTT+TGG - chr4_4:78185951-78185970 None:intergenic 60.0%
GGAGAGCGGTGGGATTTGGA+GGG - chr4_4:78186031-78186050 None:intergenic 60.0%
TGGAGAGCGGTGGGATTTGG+AGG - chr4_4:78186032-78186051 None:intergenic 60.0%
! GGTACGGTTACGGCTAGCTG+AGG - chr4_4:78186135-78186154 None:intergenic 60.0%
TGGCAGCGACGGTACGGTTA+CGG - chr4_4:78186145-78186164 None:intergenic 60.0%
GGCTGTTCCAGCAGTCGTAC+TGG - chr4_4:78186283-78186302 None:intergenic 60.0%
GCCAACGACACACACGCTGT+CGG + chr4_4:78186311-78186330 Msa0705480:CDS 60.0%
ACCGACAGCGTGTGTGTCGT+TGG - chr4_4:78186315-78186334 None:intergenic 60.0%
CTGCCATAAACCGTCGCGCT+CGG - chr4_4:78186450-78186469 None:intergenic 60.0%
! GGAGGATCGGTGTCTGGCAT+AGG + chr4_4:78186485-78186504 Msa0705480:CDS 60.0%
! GCGCCGGATAGCGGTATTGA+CGG + chr4_4:78186596-78186615 Msa0705480:CDS 60.0%
!! CGCCGGATAGCGGTATTGAC+GGG + chr4_4:78186597-78186616 Msa0705480:CDS 60.0%
TCTGCTAATGTGGGCCAGCC+CGG + chr4_4:78186737-78186756 Msa0705480:CDS 60.0%
TTGGCAGCGGTTCTTGGCGA+TGG + chr4_4:78187430-78187449 Msa0705480:intron 60.0%
!! GCCACTGCTTGGTGTGCATC+AGG - chr4_4:78187496-78187515 None:intergenic 60.0%
ACCGACCCTGCACAGAGTAC+AGG + chr4_4:78187751-78187770 Msa0705480:CDS 60.0%
CACCTCAGGGTTGGATGCCA+TGG + chr4_4:78187926-78187945 Msa0705480:CDS 60.0%
CTCCATGGCATCCAACCCTG+AGG - chr4_4:78187931-78187950 None:intergenic 60.0%
CAGGGTTGGATGCCATGGAG+TGG + chr4_4:78187931-78187950 Msa0705480:CDS 60.0%
! GTTATGGTGGCGAGTGGCGG+AGG - chr4_4:78185883-78185902 None:intergenic 65.0%
!! GAGAGGGAGTGGGTTGGTGG+TGG - chr4_4:78185911-78185930 None:intergenic 65.0%
!! AGGGAGAGGGAGTGGGTTGG+TGG - chr4_4:78185914-78185933 None:intergenic 65.0%
GAGAGGGAGAGGGAGTGGGT+TGG - chr4_4:78185917-78185936 None:intergenic 65.0%
GAGGGAGAGGGAGAGGGAGT+GGG - chr4_4:78185921-78185940 None:intergenic 65.0%
GAGACGGAGGGAGAGGGAGA+GGG - chr4_4:78185927-78185946 None:intergenic 65.0%
AGAGACGGAGGGAGAGGGAG+AGG - chr4_4:78185928-78185947 None:intergenic 65.0%
CCGGCGTTTGGAGAGACGGA+GGG - chr4_4:78185939-78185958 None:intergenic 65.0%
CCCTCCGTCTCTCCAAACGC+CGG + chr4_4:78185936-78185955 Msa0705480:CDS 65.0%
! AGGTGGTGGCAGCGACGGTA+CGG - chr4_4:78186151-78186170 None:intergenic 65.0%
! GATGCAGGTGGTGGCAGCGA+CGG - chr4_4:78186156-78186175 None:intergenic 65.0%
! AAACCGTCGCGCTCGGTGGT+TGG - chr4_4:78186443-78186462 None:intergenic 65.0%
CCATAAACCGTCGCGCTCGG+TGG - chr4_4:78186447-78186466 None:intergenic 65.0%
CCACCGAGCGCGACGGTTTA+TGG + chr4_4:78186444-78186463 Msa0705480:CDS 65.0%
CGAGCGCGACGGTTTATGGC+AGG + chr4_4:78186448-78186467 Msa0705480:CDS 65.0%
TGGCAGGCAACTGGATCGGG+AGG + chr4_4:78186464-78186483 Msa0705480:CDS 65.0%
CAGGCAACTGGATCGGGAGG+AGG + chr4_4:78186467-78186486 Msa0705480:CDS 65.0%
! TCGGGAGGAGGATCGGTGTC+TGG + chr4_4:78186479-78186498 Msa0705480:CDS 65.0%
GATTCCGGCGAAGCTGACGC+CGG + chr4_4:78186508-78186527 Msa0705480:CDS 65.0%
ACATCCGGCGTCAGCTTCGC+CGG - chr4_4:78186515-78186534 None:intergenic 65.0%
GGAGGGAGAGGGAGAGGGAG+TGG - chr4_4:78185922-78185941 None:intergenic 70.0%
GCCGGCGTTTGGAGAGACGG+AGG - chr4_4:78185940-78185959 None:intergenic 70.0%
! CCGTCGCGCTCGGTGGTTGG+CGG - chr4_4:78186440-78186459 None:intergenic 75.0%
CCGCCAACCACCGAGCGCGA+CGG + chr4_4:78186437-78186456 Msa0705480:CDS 75.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 78185756 78188605 78185756 ID=Msa0705480;Name=Msa0705480
chr4_4 mRNA 78185756 78188605 78185756 ID=Msa0705480-mRNA-1;Parent=Msa0705480;Name=Msa0705480-mRNA-1;_AED=0.00;_eAED=0.00;_QI=39|1|1|1|1|1|2|432|576
chr4_4 exon 78185756 78186788 78185756 ID=Msa0705480-mRNA-1:exon:24880;Parent=Msa0705480-mRNA-1
chr4_4 exon 78187437 78188605 78187437 ID=Msa0705480-mRNA-1:exon:24881;Parent=Msa0705480-mRNA-1
chr4_4 five_prime_UTR 78185756 78185794 78185756 ID=Msa0705480-mRNA-1:five_prime_utr;Parent=Msa0705480-mRNA-1
chr4_4 CDS 78185795 78186788 78185795 ID=Msa0705480-mRNA-1:cds;Parent=Msa0705480-mRNA-1
chr4_4 CDS 78187437 78188173 78187437 ID=Msa0705480-mRNA-1:cds;Parent=Msa0705480-mRNA-1
chr4_4 three_prime_UTR 78188174 78188605 78188174 ID=Msa0705480-mRNA-1:three_prime_utr;Parent=Msa0705480-mRNA-1
Gene Sequence

>Msa0705480

ATGAACAAACCCATTAAACTCGCAATAACCACTCTCTACATGGCTTCTCTCTTCACTTTATCTCTCTTCCTTTTCATCACTCTCTCCTCCGCCACTCGCCACCATAACCACAACCACCACCAACCCACTCCCTCTCCCTCTCCCTCCGTCTCTCCAAACGCCGGCTCAGAGATCCAACAAGCCTGTAAAGCAACCCGCTTTCCACAACAATGCGAATCATCACTCGCCCATATCCCTCCAAATCCCACCGCTCTCCAAATTCTCCAATCCGCCATCAACCTCTCATCTACCAATCTCGTAACCGCACAATCCATGGTTAAGGCTATTCTAGATTCTTCCTCAGCTAGCCGTAACCGTACCGTCGCTGCCACCACCTGCATCGAAATACTAACGAATTCACAGCACCGCATTTCTCTCTCCAACGACGCTTTAACACATGGAAAAATCAAAGACGCTCGAGCATGGTTGACCGCCGCCTTAGCTTACCAGTACGACTGCTGGAACAGCCTGAAATACGCCAACGACACACACGCTGTCGGTGAAGCTATGTCGTTTATCGATTCCCTTGAAACCCTCTCTAGTAACGCTCTTGCCATGGTGTTTTCCTACGACGTTTATGGAAAAGACACGTCGTTGTGGAAGCCGCCAACCACCGAGCGCGACGGTTTATGGCAGGCAACTGGATCGGGAGGAGGATCGGTGTCTGGCATAGGGATTCCGGCGAAGCTGACGCCGGATGTTACGGTGTGTAAGAGAGGGGAGAAGGGTTGTTATAAGACGGTGCAGGAAGCTGTTAATGCTGCGCCGGATAGCGGTATTGACGGGAAGAGGTTTGTTATATATATCAAAGAAGGGGTTTATGAGGAAACCGTTAGGGTTCCGTTGGAGAAGAGAAACGTGGTGTTTTTAGGTGATGGAATCGGGAAGACGGTTATTACCGGTTCTGCTAATGTGGGCCAGCCCGGAATGACTACTTACAACTCTGCCACCGTAGCGGTTCTTGGCGATGGATTCATGGCAAAGGATCTAACGATCGAAAACACAGCAGGTCCTGATGCACACCAAGCAGTGGCATTCAGATTAGACAGTGATCTTTCTGTAATTGAGAATTGTGAATTTTTAGGAAATCAAGATACTCTTTATGCTCATTCTCTGCGCCAATTCTACAAATCATGCCGCATTGTAGGCAATGTAGATTTTATCTTTGGAAACTCAGCTGTAATCTTCCAAGACTGTCAAATCCTGGTTCGTCCTAGACAACTCAAGCCAGAGAAGGGTGAGAACAATGCCATCACAGCTCATGGTAGAACCGACCCTGCACAGAGTACAGGATTTGTTTTCCAGAACTGTTTGATTAATGGAACTGAGGATTACATGGCATTGTATCATAGTAATCCTAAAGTGCATAAAAACTATTTGGGAAGGCCATGGAAGGAGTATTCTAGAACAGTTTTTATTCATTCGATATTAGAAGTCCTTATTACACCTCAGGGTTGGATGCCATGGAGTGGTAACTTTGCACTTAAGACACTTTATTATGGAGAATTTGAGAATACTGGTGCTGGTTCTGATTTGTCTCAGAGGGTGTCTTGGAGCAGTAAAATTCCCGCTGAACATGTAACGAGTTATTCAGCGGAGAATTTCATTCAAGGAGGTGAATGGATGCAATCATCTCAGTTATCAGCACATCGTGGTAGGAGTCATCACAGTACTCATAGGAGGCATCAGTAA
Protein sequence

>Msa0705480

MNKPIKLAITTLYMASLFTLSLFLFITLSSATRHHNHNHHQPTPSPSPSVSPNAGSEIQQACKATRFPQQCESSLAHIPPNPTALQILQSAINLSSTNLVTAQSMVKAILDSSSASRNRTVAATTCIEILTNSQHRISLSNDALTHGKIKDARAWLTAALAYQYDCWNSLKYANDTHAVGEAMSFIDSLETLSSNALAMVFSYDVYGKDTSLWKPPTTERDGLWQATGSGGGSVSGIGIPAKLTPDVTVCKRGEKGCYKTVQEAVNAAPDSGIDGKRFVIYIKEGVYEETVRVPLEKRNVVFLGDGIGKTVITGSANVGQPGMTTYNSATVAVLGDGFMAKDLTIENTAGPDAHQAVAFRLDSDLSVIENCEFLGNQDTLYAHSLRQFYKSCRIVGNVDFIFGNSAVIFQDCQILVRPRQLKPEKGENNAITAHGRTDPAQSTGFVFQNCLINGTEDYMALYHSNPKVHKNYLGRPWKEYSRTVFIHSILEVLITPQGWMPWSGNFALKTLYYGEFENTGAGSDLSQRVSWSSKIPAEHVTSYSAENFIQGGEWMQSSQLSAHRGRSHHSTHRRHQ*