Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0659300 | XP_003630249.2 | 95.139 | 576 | 26 | 1 | 1 | 576 | 1 | 574 | 0.0 | 1111 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0659300 | sp|Q9LXD9|PME51_ARATH | 65.517 | 522 | 165 | 6 | 45 | 558 | 36 | 550 | 0.0 | 711 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0659300 | A0A396GPN0 | 95.139 | 576 | 26 | 1 | 1 | 576 | 1 | 574 | 0.0 | 1111 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014410 | Msa0659300 | -0.819932 | 8.955041e-53 | -8.615850e-47 |
| Msa0018470 | Msa0659300 | -0.834532 | 2.839374e-56 | -8.615850e-47 |
| Msa0035290 | Msa0659300 | -0.805882 | 1.076833e-49 | -8.615850e-47 |
| Msa0044180 | Msa0659300 | -0.835575 | 1.549394e-56 | -8.615850e-47 |
| Msa0045620 | Msa0659300 | 0.800605 | 1.332382e-48 | -8.615850e-47 |
| Msa0064550 | Msa0659300 | -0.834829 | 2.390416e-56 | -8.615850e-47 |
| Msa0091090 | Msa0659300 | -0.836126 | 1.123419e-56 | -8.615850e-47 |
| Msa0104360 | Msa0659300 | -0.800883 | 1.169246e-48 | -8.615850e-47 |
| Msa0104390 | Msa0659300 | -0.808442 | 3.090706e-50 | -8.615850e-47 |
| Msa0108070 | Msa0659300 | -0.830112 | 3.526932e-55 | -8.615850e-47 |
| Msa0109490 | Msa0659300 | -0.819791 | 9.648069e-53 | -8.615850e-47 |
| Msa0604880 | Msa0659300 | -0.856366 | 3.377616e-62 | -8.615850e-47 |
| Msa0620000 | Msa0659300 | 0.805152 | 1.532379e-49 | -8.615850e-47 |
| Msa0624930 | Msa0659300 | 0.827697 | 1.355441e-54 | -8.615850e-47 |
| Msa0629440 | Msa0659300 | 0.814161 | 1.773931e-51 | -8.615850e-47 |
| Msa0643020 | Msa0659300 | 0.851141 | 1.076632e-60 | -8.615850e-47 |
| Msa0646190 | Msa0659300 | -0.846108 | 2.670701e-59 | -8.615850e-47 |
| Msa0651310 | Msa0659300 | -0.806014 | 1.010515e-49 | -8.615850e-47 |
| Msa0659300 | Msa0667070 | 0.827600 | 1.430111e-54 | -8.615850e-47 |
| Msa0659300 | Msa0679780 | -0.831201 | 1.908958e-55 | -8.615850e-47 |
| Msa0659300 | Msa0682730 | 0.823138 | 1.627396e-53 | -8.615850e-47 |
| Msa0659300 | Msa0693400 | -0.808398 | 3.159135e-50 | -8.615850e-47 |
| Msa0659300 | Msa0697600 | -0.803283 | 3.753628e-49 | -8.615850e-47 |
| Msa0659300 | Msa0705050 | -0.805153 | 1.531449e-49 | -8.615850e-47 |
| Msa0659300 | Msa0705460 | 0.884585 | 1.691742e-71 | -8.615850e-47 |
| Msa0659300 | Msa0705480 | 0.930929 | 7.992545e-94 | -8.615850e-47 |
| Msa0659300 | Msa0705810 | -0.812584 | 3.939695e-51 | -8.615850e-47 |
| Msa0659300 | Msa0706350 | 0.826006 | 3.437206e-54 | -8.615850e-47 |
| Msa0659300 | Msa0706430 | 0.832434 | 9.472923e-56 | -8.615850e-47 |
| Msa0659300 | Msa0715510 | 0.815718 | 8.010222e-52 | -8.615850e-47 |
| Msa0659300 | Msa0736500 | 0.812947 | 3.280926e-51 | -8.615850e-47 |
| Msa0659300 | Msa0740210 | -0.814333 | 1.625544e-51 | -8.615850e-47 |
| Msa0659300 | Msa0781390 | -0.833340 | 5.641845e-56 | -8.615850e-47 |
| Msa0659300 | Msa0803530 | -0.822350 | 2.482839e-53 | -8.615850e-47 |
| Msa0659300 | Msa0860920 | -0.820919 | 5.317384e-53 | -8.615850e-47 |
| Msa0659300 | Msa0879650 | -0.835308 | 1.809645e-56 | -8.615850e-47 |
| Msa0659300 | Msa0899730 | -0.830977 | 2.166704e-55 | -8.615850e-47 |
| Msa0659300 | Msa0922500 | 0.801410 | 9.123282e-49 | -8.615850e-47 |
| Msa0659300 | Msa0968780 | -0.800130 | 1.664628e-48 | -8.615850e-47 |
| Msa0659300 | Msa0975560 | -0.804460 | 2.137562e-49 | -8.615850e-47 |
| Msa0659300 | Msa0982960 | 0.828972 | 6.677811e-55 | -8.615850e-47 |
| Msa0659300 | Msa0984000 | -0.847261 | 1.293252e-59 | -8.615850e-47 |
| Msa0659300 | Msa0999590 | -0.855205 | 7.373763e-62 | -8.615850e-47 |
| Msa0659300 | Msa1040730 | 0.836123 | 1.125075e-56 | -8.615850e-47 |
| Msa0659300 | Msa1108540 | 0.808988 | 2.362437e-50 | -8.615850e-47 |
| Msa0659300 | Msa1125450 | -0.805852 | 1.092701e-49 | -8.615850e-47 |
| Msa0659300 | Msa1141250 | 0.825646 | 4.185065e-54 | -8.615850e-47 |
| Msa0659300 | Msa1144730 | -0.800879 | 1.171511e-48 | -8.615850e-47 |
| Msa0659300 | Msa1152290 | 0.810404 | 1.172374e-50 | -8.615850e-47 |
| Msa0659300 | Msa1164570 | -0.807871 | 4.089818e-50 | -8.615850e-47 |
| Msa0659300 | Msa1173380 | -0.824714 | 6.951239e-54 | -8.615850e-47 |
| Msa0659300 | Msa1178120 | -0.803573 | 3.267696e-49 | -8.615850e-47 |
| Msa0659300 | Msa1180050 | -0.802474 | 5.515198e-49 | -8.615850e-47 |
| Msa0659300 | Msa1211390 | -0.802809 | 4.702888e-49 | -8.615850e-47 |
| Msa0659300 | Msa1232270 | -0.806339 | 8.628775e-50 | -8.615850e-47 |
| Msa0659300 | Msa1236860 | -0.816698 | 4.836228e-52 | -8.615850e-47 |
| Msa0659300 | Msa1237260 | -0.821121 | 4.778945e-53 | -8.615850e-47 |
| Msa0659300 | Msa1240060 | 0.870472 | 1.421782e-66 | -8.615850e-47 |
| Msa0659300 | Msa1241820 | -0.818016 | 2.442213e-52 | -8.615850e-47 |
| Msa0659300 | Msa1245120 | 0.874149 | 8.463698e-68 | -8.615850e-47 |
| Msa0659300 | Msa1245780 | -0.810462 | 1.139091e-50 | -8.615850e-47 |
| Msa0659300 | Msa1281370 | 0.864406 | 1.244600e-64 | -8.615850e-47 |
| Msa0659300 | Msa1317240 | -0.803048 | 4.198958e-49 | -8.615850e-47 |
| Msa0659300 | Msa1320530 | 0.874839 | 4.934496e-68 | -8.615850e-47 |
| Msa0659300 | Msa1335970 | 0.800270 | 1.559110e-48 | -8.615850e-47 |
| Msa0659300 | Msa1349810 | -0.828308 | 9.665976e-55 | -8.615850e-47 |
| Msa0659300 | Msa1359890 | -0.844791 | 6.072943e-59 | -8.615850e-47 |
| Msa0659300 | Msa1363690 | 0.812137 | 4.932284e-51 | -8.615850e-47 |
| Msa0659300 | Msa1370930 | 0.833295 | 5.790886e-56 | -8.615850e-47 |
| Msa0659300 | Msa1371800 | 0.800260 | 1.566668e-48 | -8.615850e-47 |
| Msa0659300 | Msa1386250 | -0.806332 | 8.659962e-50 | -8.615850e-47 |
| Msa0659300 | Msa1394900 | -0.813010 | 3.178285e-51 | -8.615850e-47 |
| Msa0659300 | Msa1396550 | 0.826792 | 2.233481e-54 | -8.615850e-47 |
| Msa0659300 | Msa1412620 | 0.814917 | 1.207053e-51 | -8.615850e-47 |
| Msa0659300 | Msa1413900 | -0.801380 | 9.254207e-49 | -8.615850e-47 |
| Msa0659300 | Msa1450630 | -0.828124 | 1.069976e-54 | -8.615850e-47 |
| Msa0659300 | Msa1459540 | -0.834024 | 3.807327e-56 | -8.615850e-47 |
| Msa0659300 | Msa1460970 | 0.831733 | 1.412196e-55 | -8.615850e-47 |
| Msa0131090 | Msa0659300 | -0.808875 | 2.497820e-50 | -8.615850e-47 |
| Msa0143280 | Msa0659300 | -0.806399 | 8.383894e-50 | -8.615850e-47 |
| Msa0154200 | Msa0659300 | -0.804715 | 1.891484e-49 | -8.615850e-47 |
| Msa0154220 | Msa0659300 | -0.824048 | 9.967883e-54 | -8.615850e-47 |
| Msa0154240 | Msa0659300 | -0.837093 | 6.369528e-57 | -8.615850e-47 |
| Msa0154270 | Msa0659300 | -0.858204 | 9.670153e-63 | -8.615850e-47 |
| Msa0158610 | Msa0659300 | -0.803219 | 3.870287e-49 | -8.615850e-47 |
| Msa0170760 | Msa0659300 | 0.807364 | 5.241761e-50 | -8.615850e-47 |
| Msa0183200 | Msa0659300 | -0.813176 | 2.922307e-51 | -8.615850e-47 |
| Msa0183700 | Msa0659300 | 0.810845 | 9.414340e-51 | -8.615850e-47 |
| Msa0187980 | Msa0659300 | -0.838221 | 3.270370e-57 | -8.615850e-47 |
| Msa0197030 | Msa0659300 | -0.814951 | 1.185927e-51 | -8.615850e-47 |
| Msa0225880 | Msa0659300 | -0.872588 | 2.833250e-67 | -8.615850e-47 |
| Msa0386300 | Msa0659300 | 0.820895 | 5.385557e-53 | -8.615850e-47 |
| Msa0392050 | Msa0659300 | -0.801723 | 7.870872e-49 | -8.615850e-47 |
| Msa0428330 | Msa0659300 | -0.802691 | 4.975193e-49 | -8.615850e-47 |
| Msa0464160 | Msa0659300 | 0.802276 | 6.058037e-49 | -8.615850e-47 |
| Msa0469950 | Msa0659300 | -0.803754 | 2.997047e-49 | -8.615850e-47 |
| Msa0242260 | Msa0659300 | 0.805035 | 1.621338e-49 | -8.615850e-47 |
| Msa0253160 | Msa0659300 | -0.845306 | 4.409572e-59 | -8.615850e-47 |
| Msa0260470 | Msa0659300 | -0.863452 | 2.464285e-64 | -8.615850e-47 |
| Msa0265980 | Msa0659300 | 0.845501 | 3.904263e-59 | -8.615850e-47 |
| Msa0291940 | Msa0659300 | -0.835257 | 1.864586e-56 | -8.615850e-47 |
| Msa0303920 | Msa0659300 | 0.844685 | 6.486821e-59 | -8.615850e-47 |
| Msa0304110 | Msa0659300 | -0.869713 | 2.519286e-66 | -8.615850e-47 |
| Msa0319690 | Msa0659300 | 0.826408 | 2.758109e-54 | -8.615850e-47 |
| Msa0341190 | Msa0659300 | -0.851044 | 1.146636e-60 | -8.615850e-47 |
| Msa0344680 | Msa0659300 | -0.800192 | 1.617221e-48 | -8.615850e-47 |
| Msa0518480 | Msa0659300 | -0.828040 | 1.121232e-54 | -8.615850e-47 |
| Msa0529360 | Msa0659300 | 0.813370 | 2.649324e-51 | -8.615850e-47 |
| Msa0530340 | Msa0659300 | -0.822038 | 2.933242e-53 | -8.615850e-47 |
| Msa0545230 | Msa0659300 | -0.827476 | 1.531970e-54 | -8.615850e-47 |
| Msa0547200 | Msa0659300 | 0.851630 | 7.832748e-61 | -8.615850e-47 |
| Msa0549540 | Msa0659300 | -0.852941 | 3.317521e-61 | -8.615850e-47 |
| Msa0556070 | Msa0659300 | -0.835922 | 1.265818e-56 | -8.615850e-47 |
| Msa0560370 | Msa0659300 | -0.812621 | 3.866095e-51 | -8.615850e-47 |
| Msa0569050 | Msa0659300 | 0.850885 | 1.271017e-60 | -8.615850e-47 |
| Msa0584280 | Msa0659300 | -0.814040 | 1.886083e-51 | -8.615850e-47 |
| Msa0600820 | Msa0659300 | -0.818012 | 2.447569e-52 | -8.615850e-47 |
| Msa0601920 | Msa0659300 | 0.859207 | 4.853409e-63 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0659300 | MtrunA17_Chr8g0384121 | 95.139 | 576 | 26 | 1 | 1 | 576 | 1 | 574 | 0.0 | 1111 |
| Msa0659300 | MtrunA17_Chr3g0129921 | 65.288 | 556 | 169 | 9 | 10 | 556 | 14 | 554 | 0.0 | 743 |
| Msa0659300 | MtrunA17_Chr8g0345281 | 37.807 | 529 | 286 | 15 | 58 | 558 | 68 | 581 | 5.49e-103 | 323 |
| Msa0659300 | MtrunA17_Chr3g0126771 | 37.585 | 588 | 305 | 19 | 16 | 567 | 37 | 598 | 1.57e-102 | 322 |
| Msa0659300 | MtrunA17_Chr4g0011771 | 38.921 | 519 | 278 | 15 | 50 | 560 | 20 | 507 | 9.84e-102 | 317 |
| Msa0659300 | MtrunA17_Chr4g0011791 | 38.672 | 512 | 262 | 14 | 56 | 555 | 27 | 498 | 1.20e-101 | 317 |
| Msa0659300 | MtrunA17_Chr7g0269541 | 36.981 | 530 | 277 | 15 | 59 | 558 | 46 | 548 | 3.57e-100 | 314 |
| Msa0659300 | MtrunA17_Chr4g0069841 | 39.651 | 459 | 233 | 10 | 122 | 565 | 86 | 515 | 1.47e-99 | 311 |
| Msa0659300 | MtrunA17_Chr1g0147051 | 34.584 | 613 | 312 | 20 | 3 | 567 | 37 | 608 | 3.17e-99 | 313 |
| Msa0659300 | MtrunA17_Chr7g0269531 | 35.978 | 542 | 275 | 15 | 59 | 555 | 40 | 554 | 1.19e-97 | 308 |
| Msa0659300 | MtrunA17_Chr1g0192331 | 35.564 | 523 | 298 | 13 | 50 | 555 | 17 | 517 | 8.63e-97 | 305 |
| Msa0659300 | MtrunA17_Chr7g0269521 | 36.007 | 536 | 303 | 12 | 59 | 565 | 37 | 561 | 1.63e-96 | 305 |
| Msa0659300 | MtrunA17_Chr2g0302021 | 37.872 | 470 | 229 | 13 | 122 | 565 | 92 | 524 | 4.85e-95 | 300 |
| Msa0659300 | MtrunA17_Chr4g0011751 | 39.130 | 460 | 240 | 11 | 110 | 558 | 51 | 481 | 5.56e-95 | 299 |
| Msa0659300 | MtrunA17_Chr7g0272141 | 34.602 | 578 | 306 | 17 | 22 | 568 | 8 | 544 | 3.62e-94 | 298 |
| Msa0659300 | MtrunA17_Chr4g0069861 | 38.147 | 464 | 237 | 11 | 122 | 565 | 83 | 516 | 1.05e-92 | 294 |
| Msa0659300 | MtrunA17_Chr7g0269511 | 34.680 | 594 | 307 | 18 | 14 | 561 | 1 | 559 | 2.47e-92 | 294 |
| Msa0659300 | MtrunA17_Chr8g0391311 | 35.019 | 534 | 280 | 15 | 59 | 558 | 33 | 533 | 3.20e-92 | 293 |
| Msa0659300 | MtrunA17_Chr1g0175661 | 38.022 | 455 | 249 | 11 | 123 | 555 | 104 | 547 | 1.10e-91 | 292 |
| Msa0659300 | MtrunA17_Chr8g0391291 | 34.766 | 535 | 280 | 15 | 59 | 558 | 31 | 531 | 1.12e-91 | 292 |
| Msa0659300 | MtrunA17_Chr1g0195301 | 37.347 | 490 | 241 | 14 | 102 | 555 | 85 | 544 | 1.80e-91 | 291 |
| Msa0659300 | MtrunA17_Chr1g0195321 | 37.347 | 490 | 241 | 14 | 102 | 555 | 85 | 544 | 1.80e-91 | 291 |
| Msa0659300 | MtrunA17_Chr1g0195331 | 37.551 | 490 | 240 | 14 | 102 | 555 | 85 | 544 | 3.30e-91 | 291 |
| Msa0659300 | MtrunA17_Chr8g0354911 | 35.390 | 551 | 296 | 14 | 60 | 565 | 76 | 611 | 5.88e-91 | 292 |
| Msa0659300 | MtrunA17_Chr2g0301931 | 46.735 | 291 | 140 | 5 | 277 | 565 | 14 | 291 | 6.45e-91 | 281 |
| Msa0659300 | MtrunA17_Chr4g0069891 | 32.775 | 537 | 307 | 15 | 58 | 565 | 81 | 592 | 2.23e-89 | 287 |
| Msa0659300 | MtrunA17_Chr7g0233831 | 35.922 | 515 | 278 | 16 | 73 | 565 | 70 | 554 | 2.31e-89 | 286 |
| Msa0659300 | MtrunA17_Chr1g0195351 | 36.939 | 490 | 241 | 15 | 102 | 555 | 85 | 542 | 2.90e-88 | 283 |
| Msa0659300 | MtrunA17_Chr2g0295531 | 35.787 | 489 | 271 | 17 | 58 | 531 | 43 | 503 | 4.55e-88 | 285 |
| Msa0659300 | MtrunA17_Chr4g0069881 | 38.283 | 431 | 223 | 10 | 148 | 565 | 134 | 534 | 9.10e-87 | 279 |
| Msa0659300 | MtrunA17_Chr7g0233771 | 36.016 | 497 | 253 | 16 | 99 | 565 | 92 | 553 | 1.03e-86 | 279 |
| Msa0659300 | MtrunA17_Chr8g0354901 | 35.182 | 523 | 296 | 15 | 56 | 558 | 74 | 573 | 5.99e-86 | 278 |
| Msa0659300 | MtrunA17_Chr3g0080381 | 45.484 | 310 | 155 | 6 | 260 | 565 | 328 | 627 | 7.42e-86 | 279 |
| Msa0659300 | MtrunA17_Chr3g0079341 | 37.556 | 450 | 231 | 14 | 126 | 558 | 103 | 519 | 8.01e-86 | 276 |
| Msa0659300 | MtrunA17_Chr7g0272151 | 31.678 | 584 | 340 | 18 | 16 | 560 | 14 | 577 | 8.95e-86 | 278 |
| Msa0659300 | MtrunA17_Chr3g0079361 | 37.111 | 450 | 233 | 13 | 126 | 558 | 103 | 519 | 1.06e-84 | 273 |
| Msa0659300 | MtrunA17_Chr3g0079351 | 34.667 | 525 | 290 | 15 | 54 | 558 | 28 | 519 | 1.41e-84 | 273 |
| Msa0659300 | MtrunA17_Chr7g0233801 | 36.756 | 487 | 269 | 16 | 85 | 558 | 85 | 545 | 1.95e-84 | 273 |
| Msa0659300 | MtrunA17_Chr3g0080391 | 34.682 | 519 | 298 | 17 | 58 | 558 | 71 | 566 | 3.29e-84 | 273 |
| Msa0659300 | MtrunA17_Chr1g0194091 | 33.087 | 541 | 306 | 17 | 58 | 560 | 41 | 563 | 7.52e-84 | 272 |
| Msa0659300 | MtrunA17_Chr3g0090091 | 44.444 | 324 | 155 | 9 | 240 | 555 | 211 | 517 | 8.14e-84 | 271 |
| Msa0659300 | MtrunA17_Chr1g0192311 | 31.193 | 545 | 323 | 14 | 58 | 574 | 58 | 578 | 2.04e-83 | 271 |
| Msa0659300 | MtrunA17_Chr1g0192281 | 31.193 | 545 | 323 | 14 | 58 | 574 | 58 | 578 | 2.04e-83 | 271 |
| Msa0659300 | MtrunA17_Chr1g0195311 | 50.000 | 264 | 117 | 5 | 296 | 555 | 51 | 303 | 2.60e-82 | 260 |
| Msa0659300 | MtrunA17_Chr4g0018371 | 34.749 | 518 | 299 | 16 | 58 | 558 | 36 | 531 | 6.80e-82 | 266 |
| Msa0659300 | MtrunA17_Chr4g0000121 | 31.193 | 545 | 323 | 14 | 58 | 574 | 45 | 565 | 1.28e-81 | 266 |
| Msa0659300 | MtrunA17_Chr8g0345211 | 34.888 | 536 | 286 | 19 | 55 | 560 | 74 | 576 | 1.37e-80 | 264 |
| Msa0659300 | MtrunA17_Chr1g0192321 | 32.065 | 552 | 308 | 17 | 58 | 566 | 56 | 583 | 1.26e-79 | 261 |
| Msa0659300 | MtrunA17_Chr1g0194081 | 35.831 | 427 | 249 | 12 | 151 | 565 | 149 | 562 | 1.67e-78 | 258 |
| Msa0659300 | MtrunA17_Chr4g0067611 | 34.274 | 496 | 279 | 17 | 58 | 531 | 59 | 529 | 3.99e-78 | 257 |
| Msa0659300 | MtrunA17_Chr1g0192301 | 30.459 | 545 | 327 | 14 | 58 | 574 | 63 | 583 | 6.35e-78 | 257 |
| Msa0659300 | MtrunA17_Chr2g0295551 | 33.464 | 511 | 290 | 18 | 53 | 539 | 51 | 535 | 6.00e-76 | 251 |
| Msa0659300 | MtrunA17_Chr7g0270651 | 31.450 | 531 | 317 | 14 | 62 | 562 | 46 | 559 | 9.65e-76 | 251 |
| Msa0659300 | MtrunA17_Chr7g0270691 | 42.056 | 321 | 172 | 8 | 247 | 565 | 240 | 548 | 1.70e-75 | 249 |
| Msa0659300 | MtrunA17_Chr7g0270661 | 32.996 | 494 | 285 | 13 | 96 | 555 | 82 | 563 | 2.99e-75 | 249 |
| Msa0659300 | MtrunA17_Chr7g0270671 | 32.996 | 494 | 285 | 13 | 96 | 555 | 82 | 563 | 2.99e-75 | 249 |
| Msa0659300 | MtrunA17_Chr4g0067601 | 32.106 | 489 | 299 | 12 | 58 | 531 | 59 | 529 | 8.03e-73 | 243 |
| Msa0659300 | MtrunA17_Chr2g0302001 | 45.977 | 261 | 130 | 5 | 307 | 565 | 185 | 436 | 2.36e-72 | 238 |
| Msa0659300 | MtrunA17_Chr7g0270631 | 32.860 | 493 | 290 | 13 | 96 | 562 | 70 | 547 | 1.04e-69 | 243 |
| Msa0659300 | MtrunA17_Chr7g0270631 | 31.504 | 492 | 292 | 13 | 96 | 552 | 618 | 1099 | 4.47e-61 | 219 |
| Msa0659300 | MtrunA17_Chr8g0380581 | 36.420 | 324 | 194 | 6 | 239 | 560 | 57 | 370 | 1.35e-65 | 218 |
| Msa0659300 | MtrunA17_Chr2g0295541 | 30.220 | 546 | 292 | 21 | 53 | 539 | 51 | 566 | 1.87e-63 | 219 |
| Msa0659300 | MtrunA17_Chr7g0234711 | 43.644 | 236 | 113 | 5 | 338 | 565 | 45 | 268 | 6.66e-62 | 205 |
| Msa0659300 | MtrunA17_Chr6g0487101 | 36.792 | 318 | 169 | 6 | 249 | 556 | 86 | 381 | 3.84e-59 | 201 |
| Msa0659300 | MtrunA17_Chr5g0437831 | 36.364 | 330 | 183 | 11 | 245 | 565 | 71 | 382 | 3.81e-58 | 199 |
| Msa0659300 | MtrunA17_Chr8g0389771 | 35.758 | 330 | 176 | 8 | 242 | 557 | 72 | 379 | 1.37e-57 | 197 |
| Msa0659300 | MtrunA17_Chr7g0258341 | 33.537 | 328 | 194 | 6 | 238 | 557 | 78 | 389 | 3.17e-57 | 196 |
| Msa0659300 | MtrunA17_Chr2g0334111 | 34.969 | 326 | 183 | 8 | 244 | 565 | 22 | 322 | 1.60e-56 | 192 |
| Msa0659300 | MtrunA17_Chr7g0268241 | 35.913 | 323 | 180 | 9 | 247 | 565 | 50 | 349 | 5.00e-56 | 192 |
| Msa0659300 | MtrunA17_Chr7g0271381 | 27.632 | 532 | 341 | 14 | 54 | 569 | 56 | 559 | 3.45e-50 | 182 |
| Msa0659300 | MtrunA17_Chr5g0446301 | 35.783 | 313 | 168 | 6 | 255 | 556 | 68 | 358 | 6.83e-50 | 176 |
| Msa0659300 | MtrunA17_Chr1g0161731 | 31.464 | 321 | 187 | 7 | 244 | 556 | 45 | 340 | 5.15e-48 | 171 |
| Msa0659300 | MtrunA17_Chr1g0194311 | 32.039 | 309 | 179 | 5 | 258 | 557 | 84 | 370 | 6.73e-46 | 166 |
| Msa0659300 | MtrunA17_Chr6g0453551 | 32.602 | 319 | 179 | 5 | 243 | 549 | 1 | 295 | 9.21e-46 | 164 |
| Msa0659300 | MtrunA17_Chr7g0217941 | 32.787 | 305 | 171 | 7 | 256 | 549 | 14 | 295 | 3.52e-44 | 159 |
| Msa0659300 | MtrunA17_Chr5g0399221 | 31.833 | 311 | 179 | 7 | 256 | 555 | 71 | 359 | 2.08e-43 | 159 |
| Msa0659300 | MtrunA17_Chr6g0466951 | 31.392 | 309 | 171 | 9 | 256 | 555 | 77 | 353 | 5.15e-42 | 154 |
| Msa0659300 | MtrunA17_Chr7g0265201 | 30.363 | 303 | 180 | 6 | 258 | 555 | 109 | 385 | 1.55e-39 | 149 |
| Msa0659300 | MtrunA17_Chr4g0070051 | 31.498 | 327 | 184 | 10 | 241 | 556 | 47 | 344 | 3.79e-39 | 146 |
| Msa0659300 | MtrunA17_Chr6g0466961 | 31.056 | 322 | 186 | 7 | 242 | 556 | 33 | 325 | 1.37e-38 | 144 |
| Msa0659300 | MtrunA17_Chr2g0294321 | 29.836 | 305 | 187 | 5 | 256 | 555 | 64 | 346 | 1.50e-38 | 145 |
| Msa0659300 | MtrunA17_Chr4g0037751 | 29.836 | 305 | 187 | 7 | 256 | 555 | 79 | 361 | 1.79e-34 | 134 |
| Msa0659300 | MtrunA17_Chr5g0440871 | 31.046 | 306 | 177 | 7 | 255 | 557 | 46 | 320 | 3.21e-34 | 132 |
| Msa0659300 | MtrunA17_Chr8g0351871 | 29.747 | 316 | 189 | 6 | 247 | 555 | 33 | 322 | 4.64e-34 | 132 |
| Msa0659300 | MtrunA17_Chr8g0391261 | 43.165 | 139 | 64 | 3 | 429 | 560 | 30 | 160 | 2.91e-31 | 119 |
| Msa0659300 | MtrunA17_Chr2g0299431 | 37.168 | 226 | 126 | 6 | 239 | 459 | 43 | 257 | 4.83e-31 | 122 |
| Msa0659300 | MtrunA17_Chr5g0420831 | 27.869 | 305 | 193 | 7 | 256 | 555 | 79 | 361 | 3.50e-30 | 122 |
| Msa0659300 | MtrunA17_Chr4g0025841 | 31.907 | 257 | 146 | 7 | 247 | 503 | 37 | 264 | 3.89e-30 | 119 |
| Msa0659300 | MtrunA17_Chr2g0295851 | 27.778 | 306 | 183 | 8 | 256 | 555 | 63 | 336 | 5.36e-30 | 120 |
| Msa0659300 | MtrunA17_Chr6g0459781 | 35.912 | 181 | 103 | 5 | 241 | 412 | 6 | 182 | 2.62e-27 | 109 |
| Msa0659300 | MtrunA17_Chr5g0440901 | 36.250 | 160 | 84 | 4 | 343 | 502 | 1 | 142 | 4.71e-25 | 101 |
| Msa0659300 | MtrunA17_Chr2g0314691 | 29.557 | 203 | 125 | 3 | 353 | 555 | 17 | 201 | 4.85e-24 | 100 |
| Msa0659300 | MtrunA17_Chr5g0437821 | 36.364 | 143 | 82 | 3 | 364 | 505 | 4 | 138 | 1.40e-22 | 94.0 |
| Msa0659300 | MtrunA17_Chr6g0460141 | 37.143 | 140 | 81 | 3 | 278 | 410 | 5 | 144 | 2.18e-21 | 90.9 |
| Msa0659300 | MtrunA17_Chr7g0265161 | 26.337 | 243 | 123 | 7 | 325 | 555 | 14 | 212 | 9.70e-18 | 82.8 |
| Msa0659300 | MtrunA17_Chr5g0440891 | 33.714 | 175 | 103 | 6 | 243 | 416 | 44 | 206 | 1.10e-17 | 82.0 |
| Msa0659300 | MtrunA17_Chr4g0073911 | 29.944 | 177 | 103 | 5 | 278 | 441 | 36 | 204 | 1.18e-15 | 77.0 |
| Msa0659300 | MtrunA17_Chr6g0459791 | 34.127 | 126 | 69 | 2 | 431 | 555 | 4 | 116 | 2.59e-15 | 72.4 |
| Msa0659300 | MtrunA17_Chr7g0234731 | 30.222 | 225 | 126 | 10 | 119 | 334 | 116 | 318 | 3.03e-14 | 73.9 |
| Msa0659300 | MtrunA17_Chr5g0440881 | 29.333 | 150 | 89 | 2 | 408 | 557 | 9 | 141 | 4.28e-14 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0659300 | AT5G09760.1 | 65.517 | 522 | 165 | 6 | 45 | 558 | 36 | 550 | 0.0 | 711 |
| Msa0659300 | AT5G09760.2 | 65.891 | 516 | 165 | 5 | 51 | 558 | 64 | 576 | 0.0 | 709 |
| Msa0659300 | AT5G64640.1 | 61.131 | 548 | 198 | 7 | 25 | 558 | 55 | 601 | 0.0 | 687 |
| Msa0659300 | AT5G49180.1 | 35.789 | 570 | 324 | 15 | 14 | 560 | 14 | 564 | 6.48e-106 | 330 |
| Msa0659300 | AT3G05610.1 | 36.873 | 518 | 286 | 15 | 58 | 555 | 58 | 554 | 4.09e-105 | 331 |
| Msa0659300 | AT5G27870.1 | 36.553 | 528 | 294 | 16 | 51 | 555 | 42 | 551 | 3.51e-103 | 328 |
| Msa0659300 | AT2G45220.1 | 38.386 | 508 | 275 | 14 | 57 | 558 | 29 | 504 | 3.40e-102 | 318 |
| Msa0659300 | AT3G06830.1 | 35.490 | 541 | 282 | 15 | 58 | 560 | 51 | 562 | 4.86e-102 | 320 |
| Msa0659300 | AT3G14310.1 | 37.091 | 550 | 291 | 17 | 49 | 558 | 50 | 584 | 4.12e-101 | 318 |
| Msa0659300 | AT1G53830.1 | 36.155 | 567 | 305 | 17 | 26 | 558 | 36 | 579 | 2.93e-99 | 313 |
| Msa0659300 | AT4G02330.1 | 49.691 | 324 | 141 | 9 | 243 | 558 | 254 | 563 | 6.42e-98 | 309 |
| Msa0659300 | AT2G26450.1 | 34.862 | 545 | 300 | 20 | 42 | 558 | 86 | 603 | 1.16e-96 | 307 |
| Msa0659300 | AT2G43050.1 | 40.000 | 455 | 218 | 13 | 126 | 565 | 101 | 515 | 1.75e-96 | 304 |
| Msa0659300 | AT1G11580.1 | 48.428 | 318 | 149 | 7 | 242 | 556 | 242 | 547 | 2.79e-95 | 302 |
| Msa0659300 | AT1G23200.1 | 36.447 | 546 | 277 | 16 | 61 | 565 | 37 | 553 | 3.32e-95 | 302 |
| Msa0659300 | AT1G11580.2 | 48.428 | 318 | 149 | 7 | 242 | 556 | 263 | 568 | 6.37e-95 | 302 |
| Msa0659300 | AT1G53840.1 | 35.165 | 546 | 302 | 16 | 38 | 555 | 55 | 576 | 3.30e-94 | 300 |
| Msa0659300 | AT3G10720.2 | 34.432 | 546 | 304 | 12 | 61 | 565 | 82 | 614 | 5.18e-94 | 300 |
| Msa0659300 | AT3G05620.1 | 45.783 | 332 | 149 | 7 | 240 | 565 | 234 | 540 | 4.74e-93 | 296 |
| Msa0659300 | AT3G60730.1 | 36.072 | 499 | 278 | 11 | 81 | 555 | 27 | 508 | 1.00e-92 | 294 |
| Msa0659300 | AT4G00190.1 | 36.117 | 515 | 263 | 15 | 60 | 560 | 6 | 468 | 5.37e-92 | 291 |
| Msa0659300 | AT3G49220.1 | 34.687 | 591 | 320 | 19 | 6 | 567 | 44 | 597 | 1.23e-91 | 294 |
| Msa0659300 | AT3G49220.3 | 34.687 | 591 | 320 | 19 | 6 | 567 | 89 | 642 | 3.50e-91 | 294 |
| Msa0659300 | AT5G04970.1 | 34.483 | 551 | 303 | 12 | 61 | 568 | 87 | 622 | 3.74e-91 | 293 |
| Msa0659300 | AT2G26440.1 | 35.000 | 560 | 281 | 18 | 48 | 565 | 28 | 546 | 1.37e-90 | 290 |
| Msa0659300 | AT5G53370.1 | 34.642 | 586 | 315 | 22 | 17 | 568 | 36 | 587 | 3.90e-90 | 290 |
| Msa0659300 | AT5G53370.2 | 35.753 | 551 | 296 | 20 | 48 | 568 | 101 | 623 | 6.75e-90 | 290 |
| Msa0659300 | AT3G43270.1 | 47.988 | 323 | 145 | 9 | 246 | 561 | 214 | 520 | 8.29e-90 | 287 |
| Msa0659300 | AT4G33220.2 | 46.201 | 329 | 154 | 8 | 244 | 565 | 89 | 401 | 1.99e-89 | 282 |
| Msa0659300 | AT4G33230.1 | 34.659 | 528 | 292 | 17 | 58 | 557 | 95 | 597 | 3.42e-89 | 288 |
| Msa0659300 | AT3G10710.1 | 33.638 | 547 | 298 | 16 | 45 | 565 | 53 | 560 | 4.81e-89 | 286 |
| Msa0659300 | AT3G59010.1 | 36.468 | 521 | 263 | 16 | 63 | 558 | 43 | 520 | 6.94e-89 | 285 |
| Msa0659300 | AT4G33220.1 | 46.201 | 329 | 154 | 8 | 244 | 565 | 210 | 522 | 3.23e-88 | 283 |
| Msa0659300 | AT1G02810.1 | 34.064 | 593 | 302 | 20 | 17 | 557 | 8 | 563 | 5.24e-88 | 284 |
| Msa0659300 | AT5G04960.1 | 32.890 | 526 | 295 | 14 | 58 | 560 | 68 | 558 | 2.76e-87 | 281 |
| Msa0659300 | AT2G47550.1 | 35.866 | 566 | 271 | 19 | 46 | 555 | 18 | 547 | 9.97e-87 | 280 |
| Msa0659300 | AT5G20860.2 | 34.535 | 527 | 292 | 18 | 56 | 558 | 33 | 530 | 4.50e-84 | 272 |
| Msa0659300 | AT4G02320.1 | 34.469 | 499 | 277 | 16 | 83 | 560 | 43 | 512 | 3.27e-81 | 264 |
| Msa0659300 | AT3G10720.1 | 47.566 | 267 | 129 | 4 | 301 | 565 | 1 | 258 | 1.20e-80 | 254 |
| Msa0659300 | AT3G14300.1 | 34.010 | 591 | 315 | 21 | 2 | 555 | 406 | 958 | 5.61e-80 | 271 |
| Msa0659300 | AT5G51490.1 | 34.038 | 520 | 285 | 12 | 62 | 555 | 38 | 525 | 4.16e-79 | 259 |
| Msa0659300 | AT4G02300.1 | 43.631 | 314 | 161 | 6 | 256 | 565 | 230 | 531 | 1.28e-77 | 255 |
| Msa0659300 | AT5G51500.1 | 42.812 | 320 | 168 | 7 | 246 | 560 | 225 | 534 | 8.05e-77 | 253 |
| Msa0659300 | AT3G47400.1 | 42.727 | 330 | 173 | 8 | 241 | 565 | 275 | 593 | 1.13e-75 | 251 |
| Msa0659300 | AT4G15980.1 | 41.250 | 320 | 175 | 5 | 243 | 560 | 388 | 696 | 1.78e-75 | 254 |
| Msa0659300 | AT4G15980.2 | 41.250 | 320 | 175 | 5 | 243 | 560 | 398 | 706 | 3.32e-75 | 253 |
| Msa0659300 | AT3G27980.1 | 42.202 | 327 | 164 | 8 | 246 | 565 | 188 | 496 | 1.14e-74 | 246 |
| Msa0659300 | AT1G11370.1 | 46.875 | 256 | 124 | 5 | 246 | 501 | 45 | 288 | 6.78e-73 | 235 |
| Msa0659300 | AT1G11590.1 | 40.785 | 331 | 171 | 8 | 242 | 565 | 211 | 523 | 1.98e-71 | 238 |
| Msa0659300 | AT4G03930.1 | 40.549 | 328 | 176 | 7 | 242 | 565 | 211 | 523 | 5.51e-71 | 237 |
| Msa0659300 | AT3G62170.1 | 34.430 | 456 | 248 | 11 | 148 | 565 | 145 | 587 | 3.80e-68 | 231 |
| Msa0659300 | AT2G47040.1 | 34.316 | 475 | 237 | 14 | 148 | 565 | 138 | 594 | 1.51e-67 | 230 |
| Msa0659300 | AT5G20860.1 | 32.731 | 498 | 256 | 16 | 56 | 531 | 33 | 473 | 4.42e-67 | 227 |
| Msa0659300 | AT2G47030.1 | 31.095 | 566 | 313 | 18 | 58 | 565 | 41 | 587 | 9.74e-66 | 225 |
| Msa0659300 | AT1G05310.1 | 35.873 | 315 | 178 | 6 | 254 | 560 | 95 | 393 | 6.14e-57 | 196 |
| Msa0659300 | AT5G19730.1 | 34.862 | 327 | 179 | 6 | 242 | 556 | 78 | 382 | 1.01e-56 | 195 |
| Msa0659300 | AT2G21610.1 | 31.457 | 302 | 181 | 5 | 255 | 556 | 58 | 333 | 1.18e-48 | 173 |
| Msa0659300 | AT2G21610.2 | 31.457 | 302 | 181 | 5 | 255 | 556 | 63 | 338 | 1.89e-48 | 172 |
| Msa0659300 | AT5G55590.1 | 35.514 | 321 | 174 | 7 | 247 | 556 | 81 | 379 | 9.41e-48 | 171 |
| Msa0659300 | AT3G29090.1 | 33.115 | 305 | 170 | 5 | 256 | 549 | 15 | 296 | 5.36e-46 | 165 |
| Msa0659300 | AT2G36710.1 | 31.579 | 323 | 193 | 6 | 243 | 560 | 91 | 390 | 4.43e-45 | 165 |
| Msa0659300 | AT5G47500.1 | 32.039 | 309 | 177 | 7 | 258 | 555 | 71 | 357 | 4.47e-45 | 163 |
| Msa0659300 | AT3G17060.1 | 30.945 | 307 | 183 | 6 | 255 | 555 | 53 | 336 | 3.38e-44 | 160 |
| Msa0659300 | AT3G24130.1 | 32.177 | 317 | 182 | 8 | 256 | 562 | 42 | 335 | 4.73e-43 | 157 |
| Msa0659300 | AT2G36700.1 | 32.595 | 316 | 181 | 7 | 249 | 555 | 41 | 333 | 9.65e-43 | 156 |
| Msa0659300 | AT5G55590.2 | 37.828 | 267 | 133 | 7 | 247 | 502 | 81 | 325 | 3.11e-42 | 155 |
| Msa0659300 | AT5G18990.1 | 31.776 | 321 | 188 | 5 | 245 | 556 | 26 | 324 | 1.47e-41 | 153 |
| Msa0659300 | AT2G19150.1 | 32.441 | 299 | 184 | 5 | 258 | 555 | 51 | 332 | 1.96e-40 | 150 |
| Msa0659300 | AT5G61680.1 | 29.846 | 325 | 196 | 7 | 240 | 555 | 57 | 358 | 1.03e-39 | 149 |
| Msa0659300 | AT5G07430.1 | 30.990 | 313 | 188 | 7 | 247 | 555 | 67 | 355 | 1.16e-39 | 149 |
| Msa0659300 | AT2G47280.1 | 31.699 | 306 | 182 | 6 | 256 | 555 | 43 | 327 | 4.20e-39 | 146 |
| Msa0659300 | AT5G26810.1 | 29.874 | 318 | 199 | 5 | 246 | 555 | 32 | 333 | 1.25e-38 | 145 |
| Msa0659300 | AT5G07410.1 | 27.541 | 305 | 193 | 6 | 256 | 555 | 74 | 355 | 1.91e-36 | 140 |
| Msa0659300 | AT1G69940.1 | 27.541 | 305 | 193 | 6 | 256 | 555 | 74 | 355 | 2.22e-36 | 139 |
| Msa0659300 | AT5G07420.1 | 28.213 | 319 | 202 | 6 | 241 | 555 | 60 | 355 | 3.64e-35 | 136 |
| Msa0659300 | AT2G19150.2 | 33.333 | 246 | 146 | 5 | 258 | 502 | 51 | 279 | 1.04e-32 | 127 |
| Msa0659300 | AT1G44980.1 | 39.655 | 174 | 101 | 3 | 242 | 415 | 73 | 242 | 3.01e-28 | 114 |
Find 207 sgRNAs with CRISPR-Local
Find 263 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCAGAACTGTTTGATTAA+TGG | 0.170821 | 4_3:+69639032 | Msa0659300:CDS |
| TGATGGCGGATTGGAGAATT+TGG | 0.187737 | 4_3:-69637301 | None:intergenic |
| TGGAAAGCGGGTTGCTTTAC+AGG | 0.191752 | 4_3:-69637228 | None:intergenic |
| CCACCGAGCGCGACGGTTTA+TGG | 0.218919 | 4_3:+69637696 | Msa0659300:CDS |
| ATAGGAGGCATCAGTAAAAT+AGG | 0.229442 | 4_3:+69639408 | Msa0659300:exon |
| ATTTGGAGAGCGGTGGGATT+TGG | 0.237129 | 4_3:-69637284 | None:intergenic |
| AGGGAGAGGGAGTGGGTTGG+TGG | 0.252167 | 4_3:-69637163 | None:intergenic |
| GTTATTATTGTATTAGTAAA+TGG | 0.252439 | 4_3:-69639479 | None:intergenic |
| CGGTGGGATTTGGAGGGATA+TGG | 0.255325 | 4_3:-69637274 | None:intergenic |
| TGTATGGGGCAATTTGAAAT+TGG | 0.267963 | 4_3:+69639621 | Msa0659300:three_prime_UTR |
| ATTTCAATAGCAATCGAAAA+AGG | 0.268506 | 4_3:+69639511 | Msa0659300:three_prime_UTR |
| GTTGGTGGTGGTTGTGGTTG+TGG | 0.268522 | 4_3:-69637148 | None:intergenic |
| AGTGGTTATTGCGAGTTTAA+TGG | 0.274778 | 4_3:-69637057 | None:intergenic |
| GTGTGTCGTTGGCGTATTTC+AGG | 0.277759 | 4_3:-69637553 | None:intergenic |
| GCACTTAAGACACTTTATTA+TGG | 0.281863 | 4_3:+69639212 | Msa0659300:CDS |
| TTCCATTAATCAAACAGTTC+TGG | 0.295517 | 4_3:-69639034 | None:intergenic |
| GAGTGGGTTGGTGGTGGTTG+TGG | 0.298767 | 4_3:-69637154 | None:intergenic |
| TATGGAGAATTTGAGAATAC+TGG | 0.319097 | 4_3:+69639230 | Msa0659300:CDS |
| GAGAGGGAGTGGGTTGGTGG+TGG | 0.348554 | 4_3:-69637160 | None:intergenic |
| GAGTTTAATGGGTTTGTTCA+TGG | 0.360107 | 4_3:-69637045 | None:intergenic |
| TCCAACCCTGAGGTGTAATA+AGG | 0.360223 | 4_3:-69639169 | None:intergenic |
| GCATTGTTCTCACCCTTCTC+TGG | 0.360849 | 4_3:-69638960 | None:intergenic |
| GTGGTTATTGCGAGTTTAAT+GGG | 0.367786 | 4_3:-69637056 | None:intergenic |
| TTGGATCTCTGAGCCGGCGT+TGG | 0.373456 | 4_3:-69637201 | None:intergenic |
| TGCGGCATGATTTGTAGAAT+TGG | 0.382944 | 4_3:-69638851 | None:intergenic |
| TAGGAGGCATCAGTAAAATA+GGG | 0.389338 | 4_3:+69639409 | Msa0659300:exon |
| AATGGGTTTGTTCATGGTTG+TGG | 0.389877 | 4_3:-69637039 | None:intergenic |
| GGTGTCTGGCATAGGGATTC+CGG | 0.392391 | 4_3:+69637745 | Msa0659300:CDS |
| ATACAGCAATTGTGTATGTT+TGG | 0.397705 | 4_3:-69637007 | None:intergenic |
| GTGTACCTGTGCAACACTTT+TGG | 0.398459 | 4_3:+69639716 | Msa0659300:three_prime_UTR |
| CGGAGGAGAGAGTGATGAAA+AGG | 0.400293 | 4_3:-69637115 | None:intergenic |
| GTAAATTACAAAGGGAGTAT+TGG | 0.402573 | 4_3:-69639451 | None:intergenic |
| ATATTTCTTGCATTAAGAAA+TGG | 0.405081 | 4_3:+69639655 | Msa0659300:three_prime_UTR |
| ATTTGTCTCAGAGGGTGTCT+TGG | 0.408402 | 4_3:+69639264 | Msa0659300:CDS |
| GGTTCTTGGCGATGGATTCA+TGG | 0.410206 | 4_3:+69638689 | Msa0659300:CDS |
| GCCACTGCTTGGTGTGCATC+AGG | 0.413544 | 4_3:-69638744 | None:intergenic |
| CGCAATAACCACTCTCTACA+TGG | 0.415913 | 4_3:+69637067 | Msa0659300:CDS |
| TCGGGAGGAGGATCGGTGTC+TGG | 0.417550 | 4_3:+69637731 | Msa0659300:CDS |
| AAAGAGTCCCACTCAATGTA+TGG | 0.418443 | 4_3:+69639605 | Msa0659300:three_prime_UTR |
| AAATCCAAGGGAAGGTTAGA+AGG | 0.423435 | 4_3:+69639540 | Msa0659300:three_prime_UTR |
| ATCGGGAAGACGGTTATTAC+CGG | 0.426119 | 4_3:+69637965 | Msa0659300:CDS |
| CGTTACTAGAGAGGGTTTCA+AGG | 0.426351 | 4_3:-69637610 | None:intergenic |
| AGAAGTCCTTATTACACCTC+AGG | 0.426563 | 4_3:+69639163 | Msa0659300:CDS |
| CTGGCCCACATTAGCAGAAC+CGG | 0.431686 | 4_3:-69637984 | None:intergenic |
| TGGAGAGCGGTGGGATTTGG+AGG | 0.434100 | 4_3:-69637281 | None:intergenic |
| TACAAATCATGCCGCATTGT+AGG | 0.434437 | 4_3:+69638858 | Msa0659300:CDS |
| GGATTGTGCGGTTACGAGAT+TGG | 0.434680 | 4_3:-69637336 | None:intergenic |
| TTATGGCAGGCAACTGGATC+GGG | 0.434700 | 4_3:+69637713 | Msa0659300:CDS |
| TACACCAACTTTACTACATC+AGG | 0.437814 | 4_3:-69639698 | None:intergenic |
| GGAGGATCGGTGTCTGGCAT+AGG | 0.443078 | 4_3:+69637737 | Msa0659300:CDS |
| CCGTCGCGCTCGGTGGTTGG+CGG | 0.446645 | 4_3:-69637689 | None:intergenic |
| TATTACCGGTTCTGCTAATG+TGG | 0.450338 | 4_3:+69637979 | Msa0659300:CDS |
| GGGAGGGAGAGGGAGTGGGT+TGG | 0.451762 | 4_3:-69637166 | None:intergenic |
| TTGGCAGCGGTTCTTGGCGA+TGG | 0.452315 | 4_3:+69638681 | Msa0659300:intron |
| CTAACCTTCTAACCTTCCCT+TGG | 0.455386 | 4_3:-69639544 | None:intergenic |
| ATTTCATTCAAGGAGGTGAA+TGG | 0.457694 | 4_3:+69639333 | Msa0659300:CDS |
| TGGATCTCTGAGCCGGCGTT+GGG | 0.458662 | 4_3:-69637200 | None:intergenic |
| GACGGTTTATGGCAGGCAAC+TGG | 0.460330 | 4_3:+69637707 | Msa0659300:CDS |
| AACCGCACAATCCATGGTTA+AGG | 0.466294 | 4_3:+69637346 | Msa0659300:CDS |
| TATCAAAGAAGGGGTTTATG+AGG | 0.467273 | 4_3:+69637889 | Msa0659300:CDS |
| GAAGCTGACGCCGGATGTTA+CGG | 0.467729 | 4_3:+69637769 | Msa0659300:CDS |
| CACCTCAGGGTTGGATGCCA+TGG | 0.470349 | 4_3:+69639177 | Msa0659300:CDS |
| TGGTAGAAGTAAATTACAAA+GGG | 0.471086 | 4_3:-69639459 | None:intergenic |
| GGTGTGTAAGAGAGGGGAGA+AGG | 0.472425 | 4_3:+69637790 | Msa0659300:CDS |
| ACAAATCCTGTACTCTGTGC+AGG | 0.473024 | 4_3:-69639008 | None:intergenic |
| ATGAGAGGTTGATGGCGGAT+TGG | 0.475351 | 4_3:-69637310 | None:intergenic |
| CTGCCATAAACCGTCGCGCT+CGG | 0.477771 | 4_3:-69637699 | None:intergenic |
| AAACCGTCGCGCTCGGTGGT+TGG | 0.479503 | 4_3:-69637692 | None:intergenic |
| ATTCGTTAGTATTTCGATGC+AGG | 0.479611 | 4_3:-69637420 | None:intergenic |
| GGGTTTATGAGGAAACCGTT+AGG | 0.480051 | 4_3:+69637900 | Msa0659300:CDS |
| AGAGTTGTAAGTAGTCATTC+CGG | 0.480367 | 4_3:-69638008 | None:intergenic |
| TTTGTTATATATATCAAAGA+AGG | 0.481343 | 4_3:+69637878 | Msa0659300:CDS |
| ACATCCGGCGTCAGCTTCGC+CGG | 0.481755 | 4_3:-69637764 | None:intergenic |
| TTGTTATATATATCAAAGAA+GGG | 0.484961 | 4_3:+69637879 | Msa0659300:CDS |
| ATAGCGGTATTGACGGGAAG+AGG | 0.485584 | 4_3:+69637855 | Msa0659300:CDS |
| TCTGCTAATGTGGGCCAGCC+CGG | 0.487185 | 4_3:+69637989 | Msa0659300:CDS |
| TAGTATTTCGATGCAGGTGG+TGG | 0.490505 | 4_3:-69637414 | None:intergenic |
| GTTGTGGTGGCGAGTGGCGG+AGG | 0.491149 | 4_3:-69637132 | None:intergenic |
| GGTGGGATTTGGAGGGATAT+GGG | 0.492141 | 4_3:-69637273 | None:intergenic |
| GGCTGTTCCAGCAGTCGTAC+TGG | 0.493558 | 4_3:-69637532 | None:intergenic |
| GTGTGTAAGAGAGGGGAGAA+GGG | 0.494610 | 4_3:+69637791 | Msa0659300:CDS |
| TGAGCCGGCGTTGGGAGAAA+CGG | 0.495522 | 4_3:-69637192 | None:intergenic |
| CTTCCAAGACTGTCAAATCC+TGG | 0.495802 | 4_3:+69638917 | Msa0659300:CDS |
| TCCTTATTACACCTCAGGGT+TGG | 0.495952 | 4_3:+69639168 | Msa0659300:CDS |
| CAGGCAACTGGATCGGGAGG+AGG | 0.496369 | 4_3:+69637719 | Msa0659300:CDS |
| AACTGGATCGGGAGGAGGAT+CGG | 0.498513 | 4_3:+69637724 | Msa0659300:CDS |
| GGTGGTGGTTGTGGTTGTGG+TGG | 0.499047 | 4_3:-69637145 | None:intergenic |
| CTCTAGTAACGCTCTTGCCA+TGG | 0.500275 | 4_3:+69637622 | Msa0659300:CDS |
| GGGTTGCTTTACAGGCTTGT+TGG | 0.502770 | 4_3:-69637220 | None:intergenic |
| CGCCGGATAGCGGTATTGAC+GGG | 0.503976 | 4_3:+69637849 | Msa0659300:CDS |
| TGGCAGCGACGGTACGGTTA+CGG | 0.505101 | 4_3:-69637394 | None:intergenic |
| GTGGTTGTGGTGGCGAGTGG+CGG | 0.505600 | 4_3:-69637135 | None:intergenic |
| TCAGCGGAGAATTTCATTCA+AGG | 0.506052 | 4_3:+69639323 | Msa0659300:CDS |
| ACCGACCCTGCACAGAGTAC+AGG | 0.506536 | 4_3:+69639002 | Msa0659300:CDS |
| GAGTTGTAAGTAGTCATTCC+GGG | 0.507079 | 4_3:-69638007 | None:intergenic |
| GGTTTATGAGGAAACCGTTA+GGG | 0.507474 | 4_3:+69637901 | Msa0659300:CDS |
| ACCGACAGCGTGTGTGTCGT+TGG | 0.507485 | 4_3:-69637564 | None:intergenic |
| TGGTTCTGATTTGTCTCAGA+GGG | 0.508378 | 4_3:+69639256 | Msa0659300:CDS |
| TTCTCTGGCTTGAGTTGTCT+AGG | 0.508423 | 4_3:-69638945 | None:intergenic |
| TTCCCGTCAATACCGCTATC+CGG | 0.512214 | 4_3:-69637851 | None:intergenic |
| TGGAGAATTTGGAGAGCGGT+GGG | 0.512568 | 4_3:-69637290 | None:intergenic |
| GGAGAGCGGTGGGATTTGGA+GGG | 0.515066 | 4_3:-69637280 | None:intergenic |
| GAACCAGGATTTGACAGTCT+TGG | 0.515146 | 4_3:-69638920 | None:intergenic |
| GGCGTTGGGAGAAACGGAGG+GGG | 0.517497 | 4_3:-69637186 | None:intergenic |
| TGGGACTCTTTCTAAGTATG+TGG | 0.518936 | 4_3:-69639593 | None:intergenic |
| TAGCTTACCAGTACGACTGC+TGG | 0.519146 | 4_3:+69637525 | Msa0659300:CDS |
| ATTGGTAGATGAGAGGTTGA+TGG | 0.520863 | 4_3:-69637318 | None:intergenic |
| TCTCGTAACCGCACAATCCA+TGG | 0.524692 | 4_3:+69637340 | Msa0659300:CDS |
| CTAATCTGAATGCCACTGCT+TGG | 0.525437 | 4_3:-69638755 | None:intergenic |
| TCCATGTGTTAAAGCGTCGT+TGG | 0.528359 | 4_3:-69637465 | None:intergenic |
| TTCGCATTGTTGTGGAAAGC+GGG | 0.530551 | 4_3:-69637240 | None:intergenic |
| GCGCCGGATAGCGGTATTGA+CGG | 0.530888 | 4_3:+69637848 | Msa0659300:CDS |
| CTCTTACACACCGTAACATC+CGG | 0.535920 | 4_3:-69637779 | None:intergenic |
| TTTATGGCAGGCAACTGGAT+CGG | 0.536897 | 4_3:+69637712 | Msa0659300:CDS |
| GGAGTCATCACAGTACTCAT+AGG | 0.539961 | 4_3:+69639390 | Msa0659300:CDS |
| AAGAGTCCCACTCAATGTAT+GGG | 0.541468 | 4_3:+69639606 | Msa0659300:three_prime_UTR |
| GAGGATCGGTGTCTGGCATA+GGG | 0.541579 | 4_3:+69637738 | Msa0659300:CDS |
| ATGGTAGAAGTAAATTACAA+AGG | 0.542667 | 4_3:-69639460 | None:intergenic |
| CGAGCGCGACGGTTTATGGC+AGG | 0.543344 | 4_3:+69637700 | Msa0659300:CDS |
| GAAGTCCTTATTACACCTCA+GGG | 0.543999 | 4_3:+69639164 | Msa0659300:CDS |
| TTGGAGAATTTGGAGAGCGG+TGG | 0.547174 | 4_3:-69637291 | None:intergenic |
| AACAATGCCATCACAGCTCA+TGG | 0.547324 | 4_3:+69638975 | Msa0659300:CDS |
| GGCAAGAGCGTTACTAGAGA+GGG | 0.548464 | 4_3:-69637618 | None:intergenic |
| TGAGTTGTCTAGGACGAACC+AGG | 0.550190 | 4_3:-69638935 | None:intergenic |
| TAATGGAACTGAGGATTACA+TGG | 0.550296 | 4_3:+69639049 | Msa0659300:CDS |
| GTTGTGGTTGTGGTGGCGAG+TGG | 0.550641 | 4_3:-69637138 | None:intergenic |
| TAACTCGTTACATGTTCAGC+GGG | 0.553913 | 4_3:-69639299 | None:intergenic |
| GGTTCTACCATGAGCTGTGA+TGG | 0.554105 | 4_3:-69638982 | None:intergenic |
| GGAAGCTGTCAATGCTGCGC+CGG | 0.555539 | 4_3:+69637832 | Msa0659300:CDS |
| GAATTTGAGAATACTGGTGC+TGG | 0.555979 | 4_3:+69639236 | Msa0659300:CDS |
| AAAACTATTTGGGAAGGCCA+TGG | 0.556313 | 4_3:+69639102 | Msa0659300:CDS |
| GGAAACCGTTAGGGTTCCGT+TGG | 0.557005 | 4_3:+69637910 | Msa0659300:CDS |
| TTGGACCAAAAGTGTTGCAC+AGG | 0.557520 | 4_3:-69639721 | None:intergenic |
| ACCACGTTTCTCTTCTCCAA+CGG | 0.557929 | 4_3:-69637926 | None:intergenic |
| GTCAATGCTGCGCCGGATAG+CGG | 0.558086 | 4_3:+69637839 | Msa0659300:CDS |
| AGTGATGATTCGCATTGTTG+TGG | 0.559604 | 4_3:-69637248 | None:intergenic |
| AAATTGCCCCATACATTGAG+TGG | 0.564468 | 4_3:-69639613 | None:intergenic |
| ATTCGCATTGTTGTGGAAAG+CGG | 0.565903 | 4_3:-69637241 | None:intergenic |
| CCGGCGTTGGGAGAAACGGA+GGG | 0.566896 | 4_3:-69637188 | None:intergenic |
| CTTCTCCAACGGAACCCTAA+CGG | 0.568649 | 4_3:-69637915 | None:intergenic |
| CAATTTCTAGAGTGGTTGTG+TGG | 0.570000 | 4_3:+69639834 | Msa0659300:three_prime_UTR |
| AGTTATCAGCACATCGTGGT+AGG | 0.571556 | 4_3:+69639369 | Msa0659300:CDS |
| TCCAACGACGCTTTAACACA+TGG | 0.571581 | 4_3:+69637464 | Msa0659300:CDS |
| CGTTAGTATTTCGATGCAGG+TGG | 0.572756 | 4_3:-69637417 | None:intergenic |
| AGGTGGTGGCAGCGACGGTA+CGG | 0.575966 | 4_3:-69637400 | None:intergenic |
| GATGTTACGGTGTGTAAGAG+AGG | 0.576539 | 4_3:+69637782 | Msa0659300:CDS |
| GATGCAGGTGGTGGCAGCGA+CGG | 0.578819 | 4_3:-69637405 | None:intergenic |
| CCATAAACCGTCGCGCTCGG+TGG | 0.579333 | 4_3:-69637696 | None:intergenic |
| TAGACAACTCAAGCCAGAGA+AGG | 0.581118 | 4_3:+69638947 | Msa0659300:CDS |
| AAATCAAAGACGCTCGAGCA+TGG | 0.581386 | 4_3:+69637489 | Msa0659300:CDS |
| GTTCTAGAATACTCCTTCCA+TGG | 0.582820 | 4_3:-69639119 | None:intergenic |
| TGTAAGTAGTCATTCCGGGC+TGG | 0.582837 | 4_3:-69638003 | None:intergenic |
| CTGGTTCTGATTTGTCTCAG+AGG | 0.582934 | 4_3:+69639255 | Msa0659300:CDS |
| ATGTTACGGTGTGTAAGAGA+GGG | 0.587954 | 4_3:+69637783 | Msa0659300:CDS |
| GGCTTGTTGGATCTCTGAGC+CGG | 0.589953 | 4_3:-69637207 | None:intergenic |
| AGGTGATGGAATCGGGAAGA+CGG | 0.589955 | 4_3:+69637955 | Msa0659300:CDS |
| GGTAGATGAGAGGTTGATGG+CGG | 0.590167 | 4_3:-69637315 | None:intergenic |
| TGGCAGGCAACTGGATCGGG+AGG | 0.590980 | 4_3:+69637716 | Msa0659300:CDS |
| TCCTGTACTCTGTGCAGGGT+CGG | 0.591729 | 4_3:-69639003 | None:intergenic |
| GCCGGCGTTGGGAGAAACGG+AGG | 0.593649 | 4_3:-69637189 | None:intergenic |
| TGGCAAGAGCGTTACTAGAG+AGG | 0.593826 | 4_3:-69637619 | None:intergenic |
| TGGCGATGGATTCATGGCAA+AGG | 0.597408 | 4_3:+69638695 | Msa0659300:CDS |
| CTGTTTGATTAATGGAACTG+AGG | 0.603136 | 4_3:+69639040 | Msa0659300:CDS |
| AGACAACTCAAGCCAGAGAA+GGG | 0.603890 | 4_3:+69638948 | Msa0659300:CDS |
| GTGACCTGATGTAGTAAAGT+TGG | 0.604212 | 4_3:+69639694 | Msa0659300:three_prime_UTR |
| CAAATCCTGTACTCTGTGCA+GGG | 0.606314 | 4_3:-69639007 | None:intergenic |
| CTATTTGGGAAGGCCATGGA+AGG | 0.608614 | 4_3:+69639106 | Msa0659300:CDS |
| CCGCCAACCACCGAGCGCGA+CGG | 0.609123 | 4_3:+69637689 | Msa0659300:CDS |
| GAGAGAAGCCATGTAGAGAG+TGG | 0.610542 | 4_3:-69637075 | None:intergenic |
| GCCAACGACACACACGCTGT+CGG | 0.610858 | 4_3:+69637563 | Msa0659300:CDS |
| ATTACCGGTTCTGCTAATGT+GGG | 0.611976 | 4_3:+69637980 | Msa0659300:CDS |
| AGCCTTAACCATGGATTGTG+CGG | 0.612738 | 4_3:-69637348 | None:intergenic |
| AATTGCCCCATACATTGAGT+GGG | 0.616087 | 4_3:-69639612 | None:intergenic |
| GTTACTAGAGAGGGTTTCAA+GGG | 0.617462 | 4_3:-69637609 | None:intergenic |
| GGAGAAGGGTTGTTATAAGA+CGG | 0.618703 | 4_3:+69637805 | Msa0659300:CDS |
| ATCTAGAATAGCCTTAACCA+TGG | 0.619598 | 4_3:-69637357 | None:intergenic |
| AGTGCAAAGTTACCACTCCA+TGG | 0.621412 | 4_3:-69639194 | None:intergenic |
| GATTCCGGCGAAGCTGACGC+CGG | 0.623725 | 4_3:+69637760 | Msa0659300:CDS |
| TCCTGATGCACACCAAGCAG+TGG | 0.624479 | 4_3:+69638743 | Msa0659300:CDS |
| TGTTATATATATCAAAGAAG+GGG | 0.624851 | 4_3:+69637880 | Msa0659300:CDS |
| GTCATCACAGTACTCATAGG+AGG | 0.626796 | 4_3:+69639393 | Msa0659300:CDS |
| AGAAGCTTAGCATAACATAG+TGG | 0.630188 | 4_3:-69639774 | None:intergenic |
| TTACGAGATTGGTAGATGAG+AGG | 0.632651 | 4_3:-69637325 | None:intergenic |
| AGGAGGCATCAGTAAAATAG+GGG | 0.635064 | 4_3:+69639410 | Msa0659300:exon |
| CCCTCCGTTTCTCCCAACGC+CGG | 0.643281 | 4_3:+69637188 | Msa0659300:CDS |
| GCAGTCGTACTGGTAAGCTA+AGG | 0.643787 | 4_3:-69637522 | None:intergenic |
| ATGGAAAAGACACGTCGTTG+TGG | 0.643842 | 4_3:+69637663 | Msa0659300:CDS |
| CAGGGTTGGATGCCATGGAG+TGG | 0.651700 | 4_3:+69639182 | Msa0659300:CDS |
| GGGTTGTTATAAGACGGTGC+AGG | 0.652998 | 4_3:+69637811 | Msa0659300:CDS |
| CTAACGATCGAAAACACAGC+AGG | 0.657735 | 4_3:+69638720 | Msa0659300:CDS |
| AGAGTCCCACTCAATGTATG+GGG | 0.659178 | 4_3:+69639607 | Msa0659300:three_prime_UTR |
| GTCGTACTGGTAAGCTAAGG+CGG | 0.661087 | 4_3:-69637519 | None:intergenic |
| ACTTACAACTCTGCCACCGT+AGG | 0.667310 | 4_3:+69638019 | Msa0659300:CDS |
| GCGGAGAATTTCATTCAAGG+AGG | 0.669409 | 4_3:+69639326 | Msa0659300:CDS |
| CGGCGTTGGGAGAAACGGAG+GGG | 0.673050 | 4_3:-69637187 | None:intergenic |
| ATAACTCGTTACATGTTCAG+CGG | 0.683767 | 4_3:-69639300 | None:intergenic |
| TGTTACGGTGTGTAAGAGAG+GGG | 0.691033 | 4_3:+69637784 | Msa0659300:CDS |
| GGTACGGTTACGGCTAGCTG+AGG | 0.696882 | 4_3:-69637384 | None:intergenic |
| GGATTGGAGAATTTGGAGAG+CGG | 0.706980 | 4_3:-69637294 | None:intergenic |
| CTCCATGGCATCCAACCCTG+AGG | 0.708740 | 4_3:-69639179 | None:intergenic |
| ACATGTAACGAGTTATTCAG+CGG | 0.718970 | 4_3:+69639307 | Msa0659300:CDS |
| AATCTACATTGCCTACAATG+CGG | 0.720239 | 4_3:-69638869 | None:intergenic |
| GTACTGGTAAGCTAAGGCGG+CGG | 0.750479 | 4_3:-69637516 | None:intergenic |
| TCCGTTGGAGAAGAGAAACG+TGG | 0.756065 | 4_3:+69637925 | Msa0659300:CDS |
| CGTCGTTGGAGAGAGAAATG+CGG | 0.756471 | 4_3:-69637451 | None:intergenic |
| TCTCAGTTATCAGCACATCG+TGG | 0.761406 | 4_3:+69639365 | Msa0659300:CDS |
| AACGTCGTAGGAAAACACCA+TGG | 0.767788 | 4_3:-69637639 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTGTTATATATATCAAAGA+AGG | + | chr4_3:69637878-69637897 | Msa0659300:CDS | 15.0% |
| !! | TTGTTATATATATCAAAGAA+GGG | + | chr4_3:69637879-69637898 | Msa0659300:CDS | 15.0% |
| !! | AATAAAAATATAGTTACCTA+CGG | - | chr4_3:69638038-69638057 | None:intergenic | 15.0% |
| !!! | ATCATACTTTTTTTTTTTGA+AGG | + | chr4_3:69638074-69638093 | Msa0659300:intron | 15.0% |
| !! | TAAATACATATACTAATCTT+CGG | - | chr4_3:69638243-69638262 | None:intergenic | 15.0% |
| !! | TATTGTAGTATTGTTAATAT+TGG | + | chr4_3:69638643-69638662 | Msa0659300:intron | 15.0% |
| !! | ATTGTAGTATTGTTAATATT+GGG | + | chr4_3:69638644-69638663 | Msa0659300:intron | 15.0% |
| !! | GTTATTATTGTATTAGTAAA+TGG | - | chr4_3:69639482-69639501 | None:intergenic | 15.0% |
| !! | TGTTATATATATCAAAGAAG+GGG | + | chr4_3:69637880-69637899 | Msa0659300:CDS | 20.0% |
| !! | ATGCATAATAAGTGTAAAAT+CGG | + | chr4_3:69638158-69638177 | Msa0659300:intron | 20.0% |
| !! | AAATACATATACTAATCTTC+GGG | - | chr4_3:69638242-69638261 | None:intergenic | 20.0% |
| !! | GATTGAATTTATATACTAGA+AGG | + | chr4_3:69638348-69638367 | Msa0659300:intron | 20.0% |
| !!! | ACATTTAAAGTATTCAAAAC+TGG | - | chr4_3:69638375-69638394 | None:intergenic | 20.0% |
| !!! | ATTGAGAATTGTGAATTTTT+AGG | + | chr4_3:69638795-69638814 | Msa0659300:CDS | 20.0% |
| !!! | AAATAGTTTTTATGCACTTT+AGG | - | chr4_3:69639092-69639111 | None:intergenic | 20.0% |
| !! | TAAAGTGCATAAAAACTATT+TGG | + | chr4_3:69639091-69639110 | Msa0659300:CDS | 20.0% |
| !! | AAAGTGCATAAAAACTATTT+GGG | + | chr4_3:69639092-69639111 | Msa0659300:CDS | 20.0% |
| !! | ATATTTCTTGCATTAAGAAA+TGG | + | chr4_3:69639655-69639674 | Msa0659300:three_prime_UTR | 20.0% |
| !!! | TCATTTTTTATTTGCTTCAT+TGG | - | chr4_3:69639743-69639762 | None:intergenic | 20.0% |
| !! | GAAGCAAATAAAAAATGATA+CGG | + | chr4_3:69639745-69639764 | Msa0659300:three_prime_UTR | 20.0% |
| !! | AAGCAAATAAAAAATGATAC+GGG | + | chr4_3:69639746-69639765 | Msa0659300:three_prime_UTR | 20.0% |
| !! | TTGTAAAAAAATATAAGCAG+TGG | - | chr4_3:69639817-69639836 | None:intergenic | 20.0% |
| !!! | TTTTTTTACAATTTCTAGAG+TGG | + | chr4_3:69639826-69639845 | Msa0659300:three_prime_UTR | 20.0% |
| ! | TAAAATCGGTATTTAAACTC+CGG | + | chr4_3:69638172-69638191 | Msa0659300:intron | 25.0% |
| !!! | CTGTTTTTTTTTTTTGTGTC+CGG | - | chr4_3:69638194-69638213 | None:intergenic | 25.0% |
| ! | TACTAAAAGATGACCTAAAA+AGG | + | chr4_3:69638308-69638327 | Msa0659300:intron | 25.0% |
| !! | ACAAATGAATCAACCTTTTT+AGG | - | chr4_3:69638324-69638343 | None:intergenic | 25.0% |
| !!! | TTGGGTTATTTGATTTTTGT+TGG | + | chr4_3:69638662-69638681 | Msa0659300:intron | 25.0% |
| ! | TGGTAGAAGTAAATTACAAA+GGG | - | chr4_3:69639462-69639481 | None:intergenic | 25.0% |
| ! | ATGGTAGAAGTAAATTACAA+AGG | - | chr4_3:69639463-69639482 | None:intergenic | 25.0% |
| ! | ATTTCAATAGCAATCGAAAA+AGG | + | chr4_3:69639511-69639530 | Msa0659300:three_prime_UTR | 25.0% |
| ! | TTTCAATAGCAATCGAAAAA+GGG | + | chr4_3:69639512-69639531 | Msa0659300:three_prime_UTR | 25.0% |
| ! | AAAAAGGGAAAAAAAATCCA+AGG | + | chr4_3:69639527-69639546 | Msa0659300:three_prime_UTR | 25.0% |
| ! | AAAAGGGAAAAAAAATCCAA+GGG | + | chr4_3:69639528-69639547 | Msa0659300:three_prime_UTR | 25.0% |
| ! | AGCAAATAAAAAATGATACG+GGG | + | chr4_3:69639747-69639766 | Msa0659300:three_prime_UTR | 25.0% |
| AAAAATATAGTTACCTACGG+TGG | - | chr4_3:69638035-69638054 | None:intergenic | 30.0% | |
| TTATGCATTGTCCTTAACAA+CGG | - | chr4_3:69638146-69638165 | None:intergenic | 30.0% | |
| AGCACATAATTCTTACAATG+AGG | - | chr4_3:69638498-69638517 | None:intergenic | 30.0% | |
| CTTTCATGCATACATACTTA+AGG | - | chr4_3:69638606-69638625 | None:intergenic | 30.0% | |
| !! | TATTTGATTTTTGTTGGCAG+CGG | + | chr4_3:69638668-69638687 | Msa0659300:intron | 30.0% |
| ! | GGCAATGTAGATTTTATCTT+TGG | + | chr4_3:69638879-69638898 | Msa0659300:CDS | 30.0% |
| TTCCAGAACTGTTTGATTAA+TGG | + | chr4_3:69639032-69639051 | Msa0659300:CDS | 30.0% | |
| TTCCATTAATCAAACAGTTC+TGG | - | chr4_3:69639037-69639056 | None:intergenic | 30.0% | |
| TGCATAAAAACTATTTGGGA+AGG | + | chr4_3:69639096-69639115 | Msa0659300:CDS | 30.0% | |
| GCACTTAAGACACTTTATTA+TGG | + | chr4_3:69639212-69639231 | Msa0659300:CDS | 30.0% | |
| TATGGAGAATTTGAGAATAC+TGG | + | chr4_3:69639230-69639249 | Msa0659300:CDS | 30.0% | |
| ! | GTAAATTACAAAGGGAGTAT+TGG | - | chr4_3:69639454-69639473 | None:intergenic | 30.0% |
| !! | GAGTTTAATGGGTTTGTTCA+TGG | - | chr4_3:69637048-69637067 | None:intergenic | 35.0% |
| GTGGTTATTGCGAGTTTAAT+GGG | - | chr4_3:69637059-69637078 | None:intergenic | 35.0% | |
| AGTGGTTATTGCGAGTTTAA+TGG | - | chr4_3:69637060-69637079 | None:intergenic | 35.0% | |
| ! | ATCTAGAATAGCCTTAACCA+TGG | - | chr4_3:69637360-69637379 | None:intergenic | 35.0% |
| ATTCGTTAGTATTTCGATGC+AGG | - | chr4_3:69637423-69637442 | None:intergenic | 35.0% | |
| TATCAAAGAAGGGGTTTATG+AGG | + | chr4_3:69637889-69637908 | Msa0659300:CDS | 35.0% | |
| ! | AAGAGAAACGTGGTGTTTTT+AGG | + | chr4_3:69637935-69637954 | Msa0659300:CDS | 35.0% |
| !!! | GTGTTTTTAGGTGATGGAAT+CGG | + | chr4_3:69637947-69637966 | Msa0659300:CDS | 35.0% |
| !!! | TGTTTTTAGGTGATGGAATC+GGG | + | chr4_3:69637948-69637967 | Msa0659300:CDS | 35.0% |
| AGAGTTGTAAGTAGTCATTC+CGG | - | chr4_3:69638011-69638030 | None:intergenic | 35.0% | |
| TTATCTTAGCTCCGTTGTTA+AGG | + | chr4_3:69638132-69638151 | Msa0659300:intron | 35.0% | |
| ACATATACTAATCTTCGGGT+GGG | - | chr4_3:69638238-69638257 | None:intergenic | 35.0% | |
| TACATATACTAATCTTCGGG+TGG | - | chr4_3:69638239-69638258 | None:intergenic | 35.0% | |
| AGTATGTATGCATGAAAGCA+TGG | + | chr4_3:69638608-69638627 | Msa0659300:intron | 35.0% | |
| AATCTACATTGCCTACAATG+CGG | - | chr4_3:69638872-69638891 | None:intergenic | 35.0% | |
| CTGTTTGATTAATGGAACTG+AGG | + | chr4_3:69639040-69639059 | Msa0659300:CDS | 35.0% | |
| TAATGGAACTGAGGATTACA+TGG | + | chr4_3:69639049-69639068 | Msa0659300:CDS | 35.0% | |
| ATAACTCGTTACATGTTCAG+CGG | - | chr4_3:69639303-69639322 | None:intergenic | 35.0% | |
| ACATGTAACGAGTTATTCAG+CGG | + | chr4_3:69639307-69639326 | Msa0659300:CDS | 35.0% | |
| ATTTCATTCAAGGAGGTGAA+TGG | + | chr4_3:69639333-69639352 | Msa0659300:CDS | 35.0% | |
| !! | ATAGGAGGCATCAGTAAAAT+AGG | + | chr4_3:69639408-69639427 | Msa0659300:exon | 35.0% |
| !! | TAGGAGGCATCAGTAAAATA+GGG | + | chr4_3:69639409-69639428 | Msa0659300:exon | 35.0% |
| ! | TGTATGGGGCAATTTGAAAT+TGG | + | chr4_3:69639621-69639640 | Msa0659300:three_prime_UTR | 35.0% |
| TACACCAACTTTACTACATC+AGG | - | chr4_3:69639701-69639720 | None:intergenic | 35.0% | |
| AGAAGCTTAGCATAACATAG+TGG | - | chr4_3:69639777-69639796 | None:intergenic | 35.0% | |
| ! | AATGGGTTTGTTCATGGTTG+TGG | - | chr4_3:69637042-69637061 | None:intergenic | 40.0% |
| ATTCGCATTGTTGTGGAAAG+CGG | - | chr4_3:69637244-69637263 | None:intergenic | 40.0% | |
| AGTGATGATTCGCATTGTTG+TGG | - | chr4_3:69637251-69637270 | None:intergenic | 40.0% | |
| ATTGGTAGATGAGAGGTTGA+TGG | - | chr4_3:69637321-69637340 | None:intergenic | 40.0% | |
| TTACGAGATTGGTAGATGAG+AGG | - | chr4_3:69637328-69637347 | None:intergenic | 40.0% | |
| GTTACTAGAGAGGGTTTCAA+GGG | - | chr4_3:69637612-69637631 | None:intergenic | 40.0% | |
| ! | GTGTTTTCCTACGACGTTTA+TGG | + | chr4_3:69637644-69637663 | Msa0659300:CDS | 40.0% |
| ! | GTCTTTTCCATAAACGTCGT+AGG | - | chr4_3:69637654-69637673 | None:intergenic | 40.0% |
| ATGTTACGGTGTGTAAGAGA+GGG | + | chr4_3:69637783-69637802 | Msa0659300:CDS | 40.0% | |
| GGAGAAGGGTTGTTATAAGA+CGG | + | chr4_3:69637805-69637824 | Msa0659300:CDS | 40.0% | |
| GGTTTATGAGGAAACCGTTA+GGG | + | chr4_3:69637901-69637920 | Msa0659300:CDS | 40.0% | |
| !!! | AACGTGGTGTTTTTAGGTGA+TGG | + | chr4_3:69637941-69637960 | Msa0659300:CDS | 40.0% |
| !! | TATTACCGGTTCTGCTAATG+TGG | + | chr4_3:69637979-69637998 | Msa0659300:CDS | 40.0% |
| !! | ATTACCGGTTCTGCTAATGT+GGG | + | chr4_3:69637980-69637999 | Msa0659300:CDS | 40.0% |
| GAGTTGTAAGTAGTCATTCC+GGG | - | chr4_3:69638010-69638029 | None:intergenic | 40.0% | |
| GTAACCTTTGTATGCTTGCT+AGG | + | chr4_3:69638393-69638412 | Msa0659300:intron | 40.0% | |
| ! | TTTGTATGCTTGCTAGGCAT+GGG | + | chr4_3:69638399-69638418 | Msa0659300:intron | 40.0% |
| CTTAAGGCATGTGAAAGTGA+AGG | - | chr4_3:69638590-69638609 | None:intergenic | 40.0% | |
| ! | TGCGGCATGATTTGTAGAAT+TGG | - | chr4_3:69638854-69638873 | None:intergenic | 40.0% |
| TACAAATCATGCCGCATTGT+AGG | + | chr4_3:69638858-69638877 | Msa0659300:CDS | 40.0% | |
| AAAACTATTTGGGAAGGCCA+TGG | + | chr4_3:69639102-69639121 | Msa0659300:CDS | 40.0% | |
| !! | GTTCTAGAATACTCCTTCCA+TGG | - | chr4_3:69639122-69639141 | None:intergenic | 40.0% |
| AGAAGTCCTTATTACACCTC+AGG | + | chr4_3:69639163-69639182 | Msa0659300:CDS | 40.0% | |
| GAAGTCCTTATTACACCTCA+GGG | + | chr4_3:69639164-69639183 | Msa0659300:CDS | 40.0% | |
| GAATTTGAGAATACTGGTGC+TGG | + | chr4_3:69639236-69639255 | Msa0659300:CDS | 40.0% | |
| !! | TGGTTCTGATTTGTCTCAGA+GGG | + | chr4_3:69639256-69639275 | Msa0659300:CDS | 40.0% |
| TAACTCGTTACATGTTCAGC+GGG | - | chr4_3:69639302-69639321 | None:intergenic | 40.0% | |
| TCAGCGGAGAATTTCATTCA+AGG | + | chr4_3:69639323-69639342 | Msa0659300:CDS | 40.0% | |
| !! | AGGAGGCATCAGTAAAATAG+GGG | + | chr4_3:69639410-69639429 | Msa0659300:exon | 40.0% |
| GGGAAAAAAAATCCAAGGGA+AGG | + | chr4_3:69639532-69639551 | Msa0659300:three_prime_UTR | 40.0% | |
| AAATCCAAGGGAAGGTTAGA+AGG | + | chr4_3:69639540-69639559 | Msa0659300:three_prime_UTR | 40.0% | |
| TGGGACTCTTTCTAAGTATG+TGG | - | chr4_3:69639596-69639615 | None:intergenic | 40.0% | |
| AAAGAGTCCCACTCAATGTA+TGG | + | chr4_3:69639605-69639624 | Msa0659300:three_prime_UTR | 40.0% | |
| AAGAGTCCCACTCAATGTAT+GGG | + | chr4_3:69639606-69639625 | Msa0659300:three_prime_UTR | 40.0% | |
| AATTGCCCCATACATTGAGT+GGG | - | chr4_3:69639615-69639634 | None:intergenic | 40.0% | |
| AAATTGCCCCATACATTGAG+TGG | - | chr4_3:69639616-69639635 | None:intergenic | 40.0% | |
| GTGACCTGATGTAGTAAAGT+TGG | + | chr4_3:69639694-69639713 | Msa0659300:three_prime_UTR | 40.0% | |
| CGCAATAACCACTCTCTACA+TGG | + | chr4_3:69637067-69637086 | Msa0659300:CDS | 45.0% | |
| TTCGCATTGTTGTGGAAAGC+GGG | - | chr4_3:69637243-69637262 | None:intergenic | 45.0% | |
| GGATTGGAGAATTTGGAGAG+CGG | - | chr4_3:69637297-69637316 | None:intergenic | 45.0% | |
| !! | TGATGGCGGATTGGAGAATT+TGG | - | chr4_3:69637304-69637323 | None:intergenic | 45.0% |
| AACCGCACAATCCATGGTTA+AGG | + | chr4_3:69637346-69637365 | Msa0659300:CDS | 45.0% | |
| ! | AGCCTTAACCATGGATTGTG+CGG | - | chr4_3:69637351-69637370 | None:intergenic | 45.0% |
| TAGTATTTCGATGCAGGTGG+TGG | - | chr4_3:69637417-69637436 | None:intergenic | 45.0% | |
| CGTTAGTATTTCGATGCAGG+TGG | - | chr4_3:69637420-69637439 | None:intergenic | 45.0% | |
| TCCAACGACGCTTTAACACA+TGG | + | chr4_3:69637464-69637483 | Msa0659300:CDS | 45.0% | |
| !! | TCCATGTGTTAAAGCGTCGT+TGG | - | chr4_3:69637468-69637487 | None:intergenic | 45.0% |
| AAATCAAAGACGCTCGAGCA+TGG | + | chr4_3:69637489-69637508 | Msa0659300:CDS | 45.0% | |
| CGTTACTAGAGAGGGTTTCA+AGG | - | chr4_3:69637613-69637632 | None:intergenic | 45.0% | |
| AACGTCGTAGGAAAACACCA+TGG | - | chr4_3:69637642-69637661 | None:intergenic | 45.0% | |
| ATGGAAAAGACACGTCGTTG+TGG | + | chr4_3:69637663-69637682 | Msa0659300:CDS | 45.0% | |
| TTTATGGCAGGCAACTGGAT+CGG | + | chr4_3:69637712-69637731 | Msa0659300:CDS | 45.0% | |
| CTCTTACACACCGTAACATC+CGG | - | chr4_3:69637782-69637801 | None:intergenic | 45.0% | |
| GATGTTACGGTGTGTAAGAG+AGG | + | chr4_3:69637782-69637801 | Msa0659300:CDS | 45.0% | |
| TGTTACGGTGTGTAAGAGAG+GGG | + | chr4_3:69637784-69637803 | Msa0659300:CDS | 45.0% | |
| GGGTTTATGAGGAAACCGTT+AGG | + | chr4_3:69637900-69637919 | Msa0659300:CDS | 45.0% | |
| ACCACGTTTCTCTTCTCCAA+CGG | - | chr4_3:69637929-69637948 | None:intergenic | 45.0% | |
| ATCGGGAAGACGGTTATTAC+CGG | + | chr4_3:69637965-69637984 | Msa0659300:CDS | 45.0% | |
| CATGCCTAGCAAGCATACAA+AGG | - | chr4_3:69638400-69638419 | None:intergenic | 45.0% | |
| ! | CTTTGTATGCTTGCTAGGCA+TGG | + | chr4_3:69638398-69638417 | Msa0659300:intron | 45.0% |
| ! | TTGTATGCTTGCTAGGCATG+GGG | + | chr4_3:69638400-69638419 | Msa0659300:intron | 45.0% |
| ! | TTTTTGTTGGCAGCGGTTCT+TGG | + | chr4_3:69638675-69638694 | Msa0659300:intron | 45.0% |
| CTAACGATCGAAAACACAGC+AGG | + | chr4_3:69638720-69638739 | Msa0659300:CDS | 45.0% | |
| CTAATCTGAATGCCACTGCT+TGG | - | chr4_3:69638758-69638777 | None:intergenic | 45.0% | |
| CTTCCAAGACTGTCAAATCC+TGG | + | chr4_3:69638917-69638936 | Msa0659300:CDS | 45.0% | |
| GAACCAGGATTTGACAGTCT+TGG | - | chr4_3:69638923-69638942 | None:intergenic | 45.0% | |
| ! | TTCTCTGGCTTGAGTTGTCT+AGG | - | chr4_3:69638948-69638967 | None:intergenic | 45.0% |
| TAGACAACTCAAGCCAGAGA+AGG | + | chr4_3:69638947-69638966 | Msa0659300:CDS | 45.0% | |
| AGACAACTCAAGCCAGAGAA+GGG | + | chr4_3:69638948-69638967 | Msa0659300:CDS | 45.0% | |
| AACAATGCCATCACAGCTCA+TGG | + | chr4_3:69638975-69638994 | Msa0659300:CDS | 45.0% | |
| CAAATCCTGTACTCTGTGCA+GGG | - | chr4_3:69639010-69639029 | None:intergenic | 45.0% | |
| ACAAATCCTGTACTCTGTGC+AGG | - | chr4_3:69639011-69639030 | None:intergenic | 45.0% | |
| TCCTTATTACACCTCAGGGT+TGG | + | chr4_3:69639168-69639187 | Msa0659300:CDS | 45.0% | |
| TCCAACCCTGAGGTGTAATA+AGG | - | chr4_3:69639172-69639191 | None:intergenic | 45.0% | |
| AGTGCAAAGTTACCACTCCA+TGG | - | chr4_3:69639197-69639216 | None:intergenic | 45.0% | |
| !! | CTGGTTCTGATTTGTCTCAG+AGG | + | chr4_3:69639255-69639274 | Msa0659300:CDS | 45.0% |
| !! | ATTTGTCTCAGAGGGTGTCT+TGG | + | chr4_3:69639264-69639283 | Msa0659300:CDS | 45.0% |
| GCGGAGAATTTCATTCAAGG+AGG | + | chr4_3:69639326-69639345 | Msa0659300:CDS | 45.0% | |
| TCTCAGTTATCAGCACATCG+TGG | + | chr4_3:69639365-69639384 | Msa0659300:CDS | 45.0% | |
| AGTTATCAGCACATCGTGGT+AGG | + | chr4_3:69639369-69639388 | Msa0659300:CDS | 45.0% | |
| GGAGTCATCACAGTACTCAT+AGG | + | chr4_3:69639390-69639409 | Msa0659300:CDS | 45.0% | |
| GTCATCACAGTACTCATAGG+AGG | + | chr4_3:69639393-69639412 | Msa0659300:CDS | 45.0% | |
| CTAACCTTCTAACCTTCCCT+TGG | - | chr4_3:69639547-69639566 | None:intergenic | 45.0% | |
| AGAGTCCCACTCAATGTATG+GGG | + | chr4_3:69639607-69639626 | Msa0659300:three_prime_UTR | 45.0% | |
| ! | GTGTACCTGTGCAACACTTT+TGG | + | chr4_3:69639716-69639735 | Msa0659300:three_prime_UTR | 45.0% |
| !! | TTGGACCAAAAGTGTTGCAC+AGG | - | chr4_3:69639724-69639743 | None:intergenic | 45.0% |
| GAGAGAAGCCATGTAGAGAG+TGG | - | chr4_3:69637078-69637097 | None:intergenic | 50.0% | |
| CGGAGGAGAGAGTGATGAAA+AGG | - | chr4_3:69637118-69637137 | None:intergenic | 50.0% | |
| ! | GGGTTGCTTTACAGGCTTGT+TGG | - | chr4_3:69637223-69637242 | None:intergenic | 50.0% |
| !! | TGGAAAGCGGGTTGCTTTAC+AGG | - | chr4_3:69637231-69637250 | None:intergenic | 50.0% |
| GGTGGGATTTGGAGGGATAT+GGG | - | chr4_3:69637276-69637295 | None:intergenic | 50.0% | |
| ATTTGGAGAGCGGTGGGATT+TGG | - | chr4_3:69637287-69637306 | None:intergenic | 50.0% | |
| TGGAGAATTTGGAGAGCGGT+GGG | - | chr4_3:69637293-69637312 | None:intergenic | 50.0% | |
| TTGGAGAATTTGGAGAGCGG+TGG | - | chr4_3:69637294-69637313 | None:intergenic | 50.0% | |
| !! | ATGAGAGGTTGATGGCGGAT+TGG | - | chr4_3:69637313-69637332 | None:intergenic | 50.0% |
| !! | GGTAGATGAGAGGTTGATGG+CGG | - | chr4_3:69637318-69637337 | None:intergenic | 50.0% |
| GGATTGTGCGGTTACGAGAT+TGG | - | chr4_3:69637339-69637358 | None:intergenic | 50.0% | |
| TCTCGTAACCGCACAATCCA+TGG | + | chr4_3:69637340-69637359 | Msa0659300:CDS | 50.0% | |
| CGTCGTTGGAGAGAGAAATG+CGG | - | chr4_3:69637454-69637473 | None:intergenic | 50.0% | |
| ! | GTCGTACTGGTAAGCTAAGG+CGG | - | chr4_3:69637522-69637541 | None:intergenic | 50.0% |
| ! | GCAGTCGTACTGGTAAGCTA+AGG | - | chr4_3:69637525-69637544 | None:intergenic | 50.0% |
| TAGCTTACCAGTACGACTGC+TGG | + | chr4_3:69637525-69637544 | Msa0659300:CDS | 50.0% | |
| ! | GTGTGTCGTTGGCGTATTTC+AGG | - | chr4_3:69637556-69637575 | None:intergenic | 50.0% |
| !! | GGCAAGAGCGTTACTAGAGA+GGG | - | chr4_3:69637621-69637640 | None:intergenic | 50.0% |
| !! | TGGCAAGAGCGTTACTAGAG+AGG | - | chr4_3:69637622-69637641 | None:intergenic | 50.0% |
| CTCTAGTAACGCTCTTGCCA+TGG | + | chr4_3:69637622-69637641 | Msa0659300:CDS | 50.0% | |
| TTATGGCAGGCAACTGGATC+GGG | + | chr4_3:69637713-69637732 | Msa0659300:CDS | 50.0% | |
| GTGTGTAAGAGAGGGGAGAA+GGG | + | chr4_3:69637791-69637810 | Msa0659300:CDS | 50.0% | |
| GGGTTGTTATAAGACGGTGC+AGG | + | chr4_3:69637811-69637830 | Msa0659300:CDS | 50.0% | |
| TTCCCGTCAATACCGCTATC+CGG | - | chr4_3:69637854-69637873 | None:intergenic | 50.0% | |
| !! | ATAGCGGTATTGACGGGAAG+AGG | + | chr4_3:69637855-69637874 | Msa0659300:CDS | 50.0% |
| CTTCTCCAACGGAACCCTAA+CGG | - | chr4_3:69637918-69637937 | None:intergenic | 50.0% | |
| TCCGTTGGAGAAGAGAAACG+TGG | + | chr4_3:69637925-69637944 | Msa0659300:CDS | 50.0% | |
| !! | AGGTGATGGAATCGGGAAGA+CGG | + | chr4_3:69637955-69637974 | Msa0659300:CDS | 50.0% |
| TGTAAGTAGTCATTCCGGGC+TGG | - | chr4_3:69638006-69638025 | None:intergenic | 50.0% | |
| ACTTACAACTCTGCCACCGT+AGG | + | chr4_3:69638019-69638038 | Msa0659300:CDS | 50.0% | |
| ! | GGTTCTTGGCGATGGATTCA+TGG | + | chr4_3:69638689-69638708 | Msa0659300:CDS | 50.0% |
| ! | TGGCGATGGATTCATGGCAA+AGG | + | chr4_3:69638695-69638714 | Msa0659300:CDS | 50.0% |
| ! | TGAGTTGTCTAGGACGAACC+AGG | - | chr4_3:69638938-69638957 | None:intergenic | 50.0% |
| GCATTGTTCTCACCCTTCTC+TGG | - | chr4_3:69638963-69638982 | None:intergenic | 50.0% | |
| GGTTCTACCATGAGCTGTGA+TGG | - | chr4_3:69638985-69639004 | None:intergenic | 50.0% | |
| CTATTTGGGAAGGCCATGGA+AGG | + | chr4_3:69639106-69639125 | Msa0659300:CDS | 50.0% | |
| !! | GTTGGTGGTGGTTGTGGTTG+TGG | - | chr4_3:69637151-69637170 | None:intergenic | 55.0% |
| !! | GGCTTGTTGGATCTCTGAGC+CGG | - | chr4_3:69637210-69637229 | None:intergenic | 55.0% |
| CGGTGGGATTTGGAGGGATA+TGG | - | chr4_3:69637277-69637296 | None:intergenic | 55.0% | |
| ! | GTACTGGTAAGCTAAGGCGG+CGG | - | chr4_3:69637519-69637538 | None:intergenic | 55.0% |
| GACGGTTTATGGCAGGCAAC+TGG | + | chr4_3:69637707-69637726 | Msa0659300:CDS | 55.0% | |
| AACTGGATCGGGAGGAGGAT+CGG | + | chr4_3:69637724-69637743 | Msa0659300:CDS | 55.0% | |
| ! | GAGGATCGGTGTCTGGCATA+GGG | + | chr4_3:69637738-69637757 | Msa0659300:CDS | 55.0% |
| GGTGTCTGGCATAGGGATTC+CGG | + | chr4_3:69637745-69637764 | Msa0659300:CDS | 55.0% | |
| GAAGCTGACGCCGGATGTTA+CGG | + | chr4_3:69637769-69637788 | Msa0659300:CDS | 55.0% | |
| GGTGTGTAAGAGAGGGGAGA+AGG | + | chr4_3:69637790-69637809 | Msa0659300:CDS | 55.0% | |
| GGAAACCGTTAGGGTTCCGT+TGG | + | chr4_3:69637910-69637929 | Msa0659300:CDS | 55.0% | |
| CTGGCCCACATTAGCAGAAC+CGG | - | chr4_3:69637987-69638006 | None:intergenic | 55.0% | |
| TCCTGATGCACACCAAGCAG+TGG | + | chr4_3:69638743-69638762 | Msa0659300:CDS | 55.0% | |
| TCCTGTACTCTGTGCAGGGT+CGG | - | chr4_3:69639006-69639025 | None:intergenic | 55.0% | |
| ! | GTTGTGGTTGTGGTGGCGAG+TGG | - | chr4_3:69637141-69637160 | None:intergenic | 60.0% |
| ! | GGTGGTGGTTGTGGTTGTGG+TGG | - | chr4_3:69637148-69637167 | None:intergenic | 60.0% |
| !! | GAGTGGGTTGGTGGTGGTTG+TGG | - | chr4_3:69637157-69637176 | None:intergenic | 60.0% |
| TTGGGAGAAACGGAGGGGGA+GGG | - | chr4_3:69637185-69637204 | None:intergenic | 60.0% | |
| ! | TGAGCCGGCGTTGGGAGAAA+CGG | - | chr4_3:69637195-69637214 | None:intergenic | 60.0% |
| TGGATCTCTGAGCCGGCGTT+GGG | - | chr4_3:69637203-69637222 | None:intergenic | 60.0% | |
| TTGGATCTCTGAGCCGGCGT+TGG | - | chr4_3:69637204-69637223 | None:intergenic | 60.0% | |
| GGAGAGCGGTGGGATTTGGA+GGG | - | chr4_3:69637283-69637302 | None:intergenic | 60.0% | |
| TGGAGAGCGGTGGGATTTGG+AGG | - | chr4_3:69637284-69637303 | None:intergenic | 60.0% | |
| ! | GGTACGGTTACGGCTAGCTG+AGG | - | chr4_3:69637387-69637406 | None:intergenic | 60.0% |
| TGGCAGCGACGGTACGGTTA+CGG | - | chr4_3:69637397-69637416 | None:intergenic | 60.0% | |
| GGCTGTTCCAGCAGTCGTAC+TGG | - | chr4_3:69637535-69637554 | None:intergenic | 60.0% | |
| GCCAACGACACACACGCTGT+CGG | + | chr4_3:69637563-69637582 | Msa0659300:CDS | 60.0% | |
| ACCGACAGCGTGTGTGTCGT+TGG | - | chr4_3:69637567-69637586 | None:intergenic | 60.0% | |
| CTGCCATAAACCGTCGCGCT+CGG | - | chr4_3:69637702-69637721 | None:intergenic | 60.0% | |
| ! | GGAGGATCGGTGTCTGGCAT+AGG | + | chr4_3:69637737-69637756 | Msa0659300:CDS | 60.0% |
| GGAAGCTGTCAATGCTGCGC+CGG | + | chr4_3:69637832-69637851 | Msa0659300:CDS | 60.0% | |
| GTCAATGCTGCGCCGGATAG+CGG | + | chr4_3:69637839-69637858 | Msa0659300:CDS | 60.0% | |
| ! | GCGCCGGATAGCGGTATTGA+CGG | + | chr4_3:69637848-69637867 | Msa0659300:CDS | 60.0% |
| !! | CGCCGGATAGCGGTATTGAC+GGG | + | chr4_3:69637849-69637868 | Msa0659300:CDS | 60.0% |
| TCTGCTAATGTGGGCCAGCC+CGG | + | chr4_3:69637989-69638008 | Msa0659300:CDS | 60.0% | |
| TTGGCAGCGGTTCTTGGCGA+TGG | + | chr4_3:69638681-69638700 | Msa0659300:intron | 60.0% | |
| !! | GCCACTGCTTGGTGTGCATC+AGG | - | chr4_3:69638747-69638766 | None:intergenic | 60.0% |
| ACCGACCCTGCACAGAGTAC+AGG | + | chr4_3:69639002-69639021 | Msa0659300:CDS | 60.0% | |
| CACCTCAGGGTTGGATGCCA+TGG | + | chr4_3:69639177-69639196 | Msa0659300:CDS | 60.0% | |
| CTCCATGGCATCCAACCCTG+AGG | - | chr4_3:69639182-69639201 | None:intergenic | 60.0% | |
| CAGGGTTGGATGCCATGGAG+TGG | + | chr4_3:69639182-69639201 | Msa0659300:CDS | 60.0% | |
| ! | GTGGTTGTGGTGGCGAGTGG+CGG | - | chr4_3:69637138-69637157 | None:intergenic | 65.0% |
| !! | GAGAGGGAGTGGGTTGGTGG+TGG | - | chr4_3:69637163-69637182 | None:intergenic | 65.0% |
| !! | AGGGAGAGGGAGTGGGTTGG+TGG | - | chr4_3:69637166-69637185 | None:intergenic | 65.0% |
| GAAACGGAGGGGGAGGGAGA+GGG | - | chr4_3:69637179-69637198 | None:intergenic | 65.0% | |
| AGAAACGGAGGGGGAGGGAG+AGG | - | chr4_3:69637180-69637199 | None:intergenic | 65.0% | |
| GTTGGGAGAAACGGAGGGGG+AGG | - | chr4_3:69637186-69637205 | None:intergenic | 65.0% | |
| ! | GGCGTTGGGAGAAACGGAGG+GGG | - | chr4_3:69637189-69637208 | None:intergenic | 65.0% |
| ! | CGGCGTTGGGAGAAACGGAG+GGG | - | chr4_3:69637190-69637209 | None:intergenic | 65.0% |
| ! | CCGGCGTTGGGAGAAACGGA+GGG | - | chr4_3:69637191-69637210 | None:intergenic | 65.0% |
| CCCTCCGTTTCTCCCAACGC+CGG | + | chr4_3:69637188-69637207 | Msa0659300:CDS | 65.0% | |
| ! | AGGTGGTGGCAGCGACGGTA+CGG | - | chr4_3:69637403-69637422 | None:intergenic | 65.0% |
| ! | GATGCAGGTGGTGGCAGCGA+CGG | - | chr4_3:69637408-69637427 | None:intergenic | 65.0% |
| ! | AAACCGTCGCGCTCGGTGGT+TGG | - | chr4_3:69637695-69637714 | None:intergenic | 65.0% |
| CCATAAACCGTCGCGCTCGG+TGG | - | chr4_3:69637699-69637718 | None:intergenic | 65.0% | |
| CCACCGAGCGCGACGGTTTA+TGG | + | chr4_3:69637696-69637715 | Msa0659300:CDS | 65.0% | |
| CGAGCGCGACGGTTTATGGC+AGG | + | chr4_3:69637700-69637719 | Msa0659300:CDS | 65.0% | |
| TGGCAGGCAACTGGATCGGG+AGG | + | chr4_3:69637716-69637735 | Msa0659300:CDS | 65.0% | |
| CAGGCAACTGGATCGGGAGG+AGG | + | chr4_3:69637719-69637738 | Msa0659300:CDS | 65.0% | |
| ! | TCGGGAGGAGGATCGGTGTC+TGG | + | chr4_3:69637731-69637750 | Msa0659300:CDS | 65.0% |
| GATTCCGGCGAAGCTGACGC+CGG | + | chr4_3:69637760-69637779 | Msa0659300:CDS | 65.0% | |
| ACATCCGGCGTCAGCTTCGC+CGG | - | chr4_3:69637767-69637786 | None:intergenic | 65.0% | |
| ! | GTTGTGGTGGCGAGTGGCGG+AGG | - | chr4_3:69637135-69637154 | None:intergenic | 70.0% |
| GGGAGGGAGAGGGAGTGGGT+TGG | - | chr4_3:69637169-69637188 | None:intergenic | 70.0% | |
| GAGGGGGAGGGAGAGGGAGT+GGG | - | chr4_3:69637173-69637192 | None:intergenic | 70.0% | |
| ! | GCCGGCGTTGGGAGAAACGG+AGG | - | chr4_3:69637192-69637211 | None:intergenic | 70.0% |
| GGAGGGGGAGGGAGAGGGAG+TGG | - | chr4_3:69637174-69637193 | None:intergenic | 75.0% | |
| ! | CCGTCGCGCTCGGTGGTTGG+CGG | - | chr4_3:69637692-69637711 | None:intergenic | 75.0% |
| CCGCCAACCACCGAGCGCGA+CGG | + | chr4_3:69637689-69637708 | Msa0659300:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 69637008 | 69639855 | 69637008 | ID=Msa0659300;Name=Msa0659300 |
| chr4_3 | mRNA | 69637008 | 69639855 | 69637008 | ID=Msa0659300-mRNA-1;Parent=Msa0659300;Name=Msa0659300-mRNA-1;_AED=0.00;_eAED=0.00;_QI=39|1|1|1|1|1|2|431|576 |
| chr4_3 | exon | 69637008 | 69638040 | 69637008 | ID=Msa0659300-mRNA-1:exon:20440;Parent=Msa0659300-mRNA-1 |
| chr4_3 | exon | 69638688 | 69639855 | 69638688 | ID=Msa0659300-mRNA-1:exon:20441;Parent=Msa0659300-mRNA-1 |
| chr4_3 | five_prime_UTR | 69637008 | 69637046 | 69637008 | ID=Msa0659300-mRNA-1:five_prime_utr;Parent=Msa0659300-mRNA-1 |
| chr4_3 | CDS | 69637047 | 69638040 | 69637047 | ID=Msa0659300-mRNA-1:cds;Parent=Msa0659300-mRNA-1 |
| chr4_3 | CDS | 69638688 | 69639424 | 69638688 | ID=Msa0659300-mRNA-1:cds;Parent=Msa0659300-mRNA-1 |
| chr4_3 | three_prime_UTR | 69639425 | 69639855 | 69639425 | ID=Msa0659300-mRNA-1:three_prime_utr;Parent=Msa0659300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
