AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0706350

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0706350 MtrunA17_Chr8g0385651 99.038 416 4 0 1 416 1 416 0.0 856
Msa0706350 MtrunA17_Chr8g0385671 95.673 416 18 0 1 416 1 416 0.0 829
Msa0706350 MtrunA17_Chr2g0320251 45.115 348 186 4 45 388 84 430 1.13e-101 309
Msa0706350 MtrunA17_Chr4g0028201 42.737 358 200 4 35 388 92 448 1.88e-101 309
Msa0706350 MtrunA17_Chr7g0265461 27.635 351 206 12 49 384 72 389 5.28e-32 125
Msa0706350 MtrunA17_Chr4g0055991 28.857 350 208 12 50 384 204 527 1.04e-31 126
Msa0706350 MtrunA17_Chr1g0179651 28.161 348 209 12 49 384 12 330 2.68e-31 122
Msa0706350 MtrunA17_Chr7g0265451 26.857 350 210 9 49 384 189 506 5.75e-31 124
Msa0706350 MtrunA17_Chr5g0411991 28.021 389 221 13 19 384 54 406 1.35e-29 119
Msa0706350 MtrunA17_Chr7g0265381 27.920 351 204 13 50 384 48 365 8.85e-29 115
Msa0706350 MtrunA17_Chr3g0137491 28.671 286 173 8 102 384 125 382 2.22e-28 115
Msa0706350 MtrunA17_Chr3g0119721 26.688 311 200 8 81 384 46 335 4.63e-28 113
Msa0706350 MtrunA17_Chr1g0197381 28.479 309 181 10 96 392 268 548 6.96e-28 115
Msa0706350 MtrunA17_Chr4g0064411 27.152 302 195 8 90 384 170 453 1.17e-27 114
Msa0706350 MtrunA17_Chr3g0120131 26.019 319 192 9 81 384 184 473 3.24e-27 113
Msa0706350 MtrunA17_Chr3g0131051 27.374 358 196 14 50 384 166 482 3.88e-27 113
Msa0706350 MtrunA17_Chr3g0140131 27.907 344 213 10 50 384 268 585 7.90e-27 112
Msa0706350 MtrunA17_Chr4g0064461 26.769 325 193 10 67 384 170 456 6.53e-26 109
Msa0706350 MtrunA17_Chr1g0146181 28.371 356 198 14 49 384 260 578 7.35e-25 107
Msa0706350 MtrunA17_Chr8g0390121 27.095 358 199 14 50 384 283 601 1.67e-24 105
Msa0706350 MtrunA17_Chr3g0140141 28.221 326 194 11 73 384 244 543 5.53e-24 104
Msa0706350 MtrunA17_Chr4g0064471 23.055 347 228 9 41 384 151 461 2.14e-23 102
Msa0706350 MtrunA17_Chr1g0173651 25.000 348 202 11 52 341 356 702 6.28e-23 101
Msa0706350 MtrunA17_Chr7g0253441 25.081 307 204 8 77 381 187 469 7.05e-21 94.7
Msa0706350 MtrunA17_Chr4g0039811 27.809 356 205 14 50 372 112 448 6.47e-19 88.6
Msa0706350 MtrunA17_Chr6g0460631 23.483 379 230 11 50 389 113 470 4.79e-18 86.3
Msa0706350 MtrunA17_Chr3g0092341 24.372 398 232 10 36 388 101 474 5.18e-16 79.7
Msa0706350 MtrunA17_Chr1g0200871 25.085 295 168 10 142 401 195 471 4.55e-13 70.9
Msa0706350 MtrunA17_Chr5g0421571 31.757 148 91 3 19 159 107 251 5.03e-13 69.7
Msa0706350 MtrunA17_Chr7g0254391 22.549 306 212 6 92 389 187 475 7.80e-13 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0706350 AT5G61840.1 91.133 406 35 1 11 416 11 415 0.0 775
Msa0706350 AT1G27440.1 88.279 401 46 1 16 416 13 412 0.0 746
Msa0706350 AT5G22940.1 42.179 358 200 4 50 400 109 466 1.15e-100 308
Msa0706350 AT5G22940.2 42.179 358 200 4 50 400 138 495 1.88e-100 308
Msa0706350 AT2G28110.1 42.897 359 196 6 42 394 86 441 4.59e-99 303
Msa0706350 AT5G37000.1 29.568 301 175 10 96 384 268 543 1.15e-31 127
Msa0706350 AT5G03795.1 30.286 350 207 13 49 388 189 511 5.29e-31 124
Msa0706350 AT4G38040.1 29.143 350 198 12 49 384 103 416 8.56e-31 122
Msa0706350 AT4G16745.1 29.179 329 193 13 73 384 218 523 7.95e-30 121
Msa0706350 AT5G11130.2 29.043 303 188 8 89 384 41 323 8.43e-30 118
Msa0706350 AT4G38040.2 30.225 311 169 10 49 345 103 379 2.00e-29 119
Msa0706350 AT5G11130.1 29.043 303 188 8 89 384 185 467 6.55e-29 118
Msa0706350 AT4G32790.1 27.954 347 212 13 49 384 266 585 5.14e-28 116
Msa0706350 AT4G32790.3 27.954 347 212 13 49 384 266 585 5.14e-28 116
Msa0706350 AT4G32790.2 27.954 347 212 13 49 384 266 585 5.14e-28 116
Msa0706350 AT5G25310.1 28.531 354 202 14 49 384 150 470 5.14e-28 115
Msa0706350 AT5G11610.1 27.457 346 212 9 50 384 220 537 5.57e-28 116
Msa0706350 AT4G16745.2 29.392 296 175 10 73 353 218 494 1.11e-27 115
Msa0706350 AT5G25820.1 28.693 352 203 15 50 384 324 644 1.26e-27 115
Msa0706350 AT3G42180.4 27.362 307 191 10 89 384 45 330 7.21e-26 107
Msa0706350 AT5G20260.1 26.689 296 191 7 96 384 48 324 2.03e-25 106
Msa0706350 AT5G20260.3 26.689 296 191 7 96 384 75 351 2.67e-25 106
Msa0706350 AT3G42180.1 27.362 307 191 10 89 384 174 459 3.05e-25 107
Msa0706350 AT5G19670.1 26.857 350 210 14 50 384 281 599 6.59e-25 107
Msa0706350 AT5G19670.2 26.857 350 210 14 50 384 281 599 6.59e-25 107
Msa0706350 AT5G20260.2 26.689 296 191 7 96 384 180 456 1.27e-24 105
Msa0706350 AT5G33290.1 29.699 266 156 10 126 384 248 489 6.12e-24 103
Msa0706350 AT3G07620.1 26.821 302 187 9 93 384 172 449 2.19e-23 102
Msa0706350 AT5G16890.1 25.424 354 216 12 50 372 118 454 3.40e-21 95.9
Msa0706350 AT1G67410.1 24.934 377 230 11 50 390 53 412 6.18e-21 94.7
Msa0706350 AT3G45400.1 25.325 308 205 9 90 389 151 441 9.79e-15 76.3
Msa0706350 AT2G35100.1 24.156 385 216 19 49 389 59 411 1.08e-14 75.9
Msa0706350 AT3G03650.1 24.528 318 198 10 90 389 190 483 1.69e-14 75.5
Msa0706350 AT1G74680.1 22.917 384 231 11 50 389 75 437 4.44e-13 71.2

Find 193 sgRNAs with CRISPR-Local

Find 913 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCTTCAAATTGGCCTTAT+TGG 0.102741 4_4:-79305727 Msa0706350:CDS
TGATTACCACTTTATTATTT+TGG 0.154260 4_4:-79303773 Msa0706350:three_prime_UTR
ACCGACCCCTATGAACATTT+TGG 0.163679 4_4:+79304316 None:intergenic
AATCAGCTTCTTCAGGATTA+AGG 0.174499 4_4:+79305849 None:intergenic
AAAACTGCTACCAAGGTTTA+AGG 0.176700 4_4:+79304388 None:intergenic
ATCTCCTGATTGTGCGGGTT+GGG 0.180030 4_4:+79304521 None:intergenic
CAACCTACTGAAAGAATTTC+AGG 0.205977 4_4:-79308886 Msa0706350:intron
TTGTGGTTCCTCATGACTTT+GGG 0.215552 4_4:-79305676 Msa0706350:CDS
CATATCATAGCTTGTTGTTT+TGG 0.231738 4_4:-79303999 Msa0706350:three_prime_UTR
CATCATTCGAGGCGACTTAA+AGG 0.233456 4_4:+79305769 None:intergenic
TACAACTTATTTCTTCAAAT+TGG 0.241087 4_4:-79305736 Msa0706350:CDS
GTGTCTGTGTGTGTGGATTT+AGG 0.251600 4_4:-79303932 Msa0706350:three_prime_UTR
GCTACCTTGGTTCAAACATT+TGG 0.286641 4_4:-79305466 Msa0706350:CDS
AACATTGCTTGCTTCATAGA+AGG 0.295573 4_4:+79304549 None:intergenic
GCCTTCCATCAAGTTCTAAA+TGG 0.295689 4_4:-79304498 Msa0706350:CDS
AAAATGGGTATTTGGAAATT+GGG 0.306965 4_4:-79308973 Msa0706350:CDS
GAGAGTAGCGAAGTTGAAAA+TGG 0.315479 4_4:+79316274 None:intergenic
TCCTGCTAAAATCTAAATAC+TGG 0.321872 4_4:+79303855 None:intergenic
TTGGATTCAAGCTTGTCTTT+AGG 0.328560 4_4:-79303831 Msa0706350:three_prime_UTR
AGCGGTGTGGGAGAACTTTA+AGG 0.332947 4_4:-79304874 Msa0706350:CDS
ATCAGCTTCTTCAGGATTAA+GGG 0.335863 4_4:+79305850 None:intergenic
GTGGGAGATTTCTTAGAAAT+GGG 0.337748 4_4:+79316159 None:intergenic
AACATATGGGTTAGGCATCT+TGG 0.349568 4_4:+79305923 None:intergenic
CAAGTCCATTTAGAACTTGA+TGG 0.350985 4_4:+79304493 None:intergenic
TCTCCTGATTGTGCGGGTTG+GGG 0.353405 4_4:+79304522 None:intergenic
AGATCAATCATGTAGCAAAT+TGG 0.353942 4_4:+79304215 None:intergenic
TAAAACCAATCAGCTTCTTC+AGG 0.355917 4_4:+79305842 None:intergenic
ACCACAGCTTCAACCAATCT+TGG 0.366518 4_4:+79304747 None:intergenic
TGTGGGAGATTTCTTAGAAA+TGG 0.366861 4_4:+79316158 None:intergenic
TTGGTTGAAGCTGTGGTATT+TGG 0.367168 4_4:-79304741 Msa0706350:CDS
TTTGTGGTTCCTCATGACTT+TGG 0.372681 4_4:-79305677 Msa0706350:CDS
AGATCTCAGCAGCAAACATA+TGG 0.376928 4_4:+79305909 None:intergenic
CTTGCATAATAACCACCTTC+AGG 0.377203 4_4:+79305292 None:intergenic
CTACCTTGGTTCAAACATTT+GGG 0.381929 4_4:-79305465 Msa0706350:CDS
GCTGCTGCGGCGTGCTACCT+TGG 0.382050 4_4:-79305479 Msa0706350:CDS
TGTTTCCTTAGTATAACTTC+TGG 0.382496 4_4:+79304588 None:intergenic
CCCTCTGTTCGGTTCCAATA+AGG 0.384026 4_4:+79305713 None:intergenic
AAGTCACAGGTGGTGTATAC+AGG 0.384394 4_4:+79305815 None:intergenic
CTTCTTCAGGATTAAGGGTT+CGG 0.385048 4_4:+79305855 None:intergenic
TAGCTGGAAGGAAAGGGAAA+TGG 0.387658 4_4:+79316195 None:intergenic
GAGGGGTATTGTAATTGTGT+GGG 0.391814 4_4:+79316353 None:intergenic
TTATGATTCTTTATATGTCT+TGG 0.402929 4_4:-79304349 Msa0706350:three_prime_UTR
ACCTGTGACTTGACACCAAA+TGG 0.407155 4_4:-79305803 Msa0706350:CDS
TTTCTTGTTCTGATGATAGT+TGG 0.408620 4_4:-79304087 Msa0706350:three_prime_UTR
CATCTCCTGATTGTGCGGGT+TGG 0.410206 4_4:+79304520 None:intergenic
ATATCATCGGCAATAATAAC+AGG 0.410609 4_4:+79304711 None:intergenic
TTCAACCAATCTTGGGCTCC+AGG 0.410705 4_4:+79304755 None:intergenic
ATTTGAAGAAATAAGTTGTA+TGG 0.413913 4_4:+79305739 None:intergenic
GATATGCTTGAAGTCTCAAT+TGG 0.414862 4_4:+79304016 None:intergenic
GAAAACAGACACTCCTACTA+AGG 0.414930 4_4:+79304162 None:intergenic
AAGGGTAAAGGGAGGCCATT+TGG 0.417277 4_4:+79305788 None:intergenic
AGAGGGGTATTGTAATTGTG+TGG 0.419310 4_4:+79316352 None:intergenic
CAAGGTTTAAGGTCGCCAAC+AGG 0.419697 4_4:+79304399 None:intergenic
GTGTGGATTTAGGTTAGGTT+AGG 0.419775 4_4:-79303922 Msa0706350:three_prime_UTR
CAAATTTAGTCAACAGAAGA+AGG 0.421111 4_4:+79316105 None:intergenic
CAATACCGTGGGAAGAGATC+GGG 0.421402 4_4:-79304668 Msa0706350:CDS
AGCTGGAAGGAAAGGGAAAT+GGG 0.425156 4_4:+79316196 None:intergenic
ACATATGGGTTAGGCATCTT+GGG 0.425565 4_4:+79305924 None:intergenic
TCTTAGAAATGGGGTTTCAA+TGG 0.428869 4_4:+79316169 None:intergenic
ATCCTCCCCAAAATGTTCAT+AGG 0.429719 4_4:-79304323 Msa0706350:three_prime_UTR
TTTCTCTTGTGTCACGGCAT+TGG 0.430557 4_4:-79304143 Msa0706350:three_prime_UTR
AGGTGCAAGAGCAGCGGTGT+GGG 0.432542 4_4:-79304886 Msa0706350:CDS
TTGGAAAATAAGAGTCATAA+TGG 0.441627 4_4:-79304124 Msa0706350:three_prime_UTR
AAGGGGAGAAGAGCTTGAAT+TGG 0.443074 4_4:-79304431 Msa0706350:CDS
TGGTGGGATCGATGTGAGTA+TGG 0.450775 4_4:+79304608 None:intergenic
TGTGTGTGTGGATTTAGGTT+AGG 0.451242 4_4:-79303927 Msa0706350:three_prime_UTR
TTAATCCTGAAGAAGCTGAT+TGG 0.455161 4_4:-79305847 Msa0706350:CDS
ATCATTCGAGGCGACTTAAA+GGG 0.456095 4_4:+79305770 None:intergenic
TTCTGAGAAGCAACAGAGAC+AGG 0.456845 4_4:+79316222 None:intergenic
AGGGAAAGTAGTTGTGTTGT+GGG 0.457301 4_4:+79316141 None:intergenic
TAGTCAACAGAAGAAGGTTA+AGG 0.459446 4_4:+79316111 None:intergenic
CAACCAATCTTGGGCTCCAG+GGG 0.460367 4_4:+79304757 None:intergenic
GGGGTTTCAATGGAATTAGC+TGG 0.462075 4_4:+79316179 None:intergenic
TTGTCTATGCCCACTTGGAT+GGG 0.465656 4_4:-79304781 Msa0706350:CDS
TTTGTCTATGCCCACTTGGA+TGG 0.466748 4_4:-79304782 Msa0706350:CDS
TTAGGAAGAAGTGTCAAATC+TGG 0.467946 4_4:-79303904 Msa0706350:three_prime_UTR
CACGGTATTGCATCGGCAAA+CGG 0.471872 4_4:+79304681 None:intergenic
AAGCTATCTACCACCCTACC+TGG 0.472732 4_4:+79303678 None:intergenic
TCCTCCCCAAAATGTTCATA+GGG 0.473430 4_4:-79304322 Msa0706350:three_prime_UTR
TGCTTGCTTCATAGAAGGGT+TGG 0.477612 4_4:+79304554 None:intergenic
TTCCTTAGTATAACTTCTGG+TGG 0.480532 4_4:+79304591 None:intergenic
TCTAGACTCATACTTGGTAA+TGG 0.480817 4_4:+79305645 None:intergenic
AATGATCGGCTCCCTCTGTT+CGG 0.484122 4_4:+79305702 None:intergenic
TCTAGTTTATTCTCCAGGTA+GGG 0.489257 4_4:-79303691 Msa0706350:three_prime_UTR
GTAATTCTAGTTTATTCTCC+AGG 0.490086 4_4:-79303696 Msa0706350:three_prime_UTR
ATGGAATTAGCTGGAAGGAA+AGG 0.490515 4_4:+79316188 None:intergenic
GAGGCGACTTAAAGGGTAAA+GGG 0.490626 4_4:+79305777 None:intergenic
CGGGGTGTTTGTTGATGAGC+AGG 0.491978 4_4:-79304649 Msa0706350:CDS
AGGTAGTGCTGGTGATGTAT+TGG 0.493276 4_4:-79306026 Msa0706350:CDS
ACATTGCTTGCTTCATAGAA+GGG 0.496136 4_4:+79304550 None:intergenic
TTGCATAATAACCACCTTCA+GGG 0.496241 4_4:+79305293 None:intergenic
TGATCCGGTTGGAAGGTTGA+AGG 0.497770 4_4:-79305999 Msa0706350:CDS
GGGAGCCGATCATTTCTTTG+TGG 0.498580 4_4:-79305693 Msa0706350:CDS
TGTGGTTCCTCATGACTTTG+GGG 0.499739 4_4:-79305675 Msa0706350:CDS
AATTGGACTGCTGGCCCTGT+TGG 0.500040 4_4:-79304414 Msa0706350:CDS
TGGAATTAGCTGGAAGGAAA+GGG 0.502294 4_4:+79316189 None:intergenic
AAAACCTTCAACCTTCCAAC+CGG 0.502517 4_4:+79305995 None:intergenic
CCACAGCTTCAACCAATCTT+GGG 0.502883 4_4:+79304748 None:intergenic
TCCTTAGTATAACTTCTGGT+GGG 0.503457 4_4:+79304592 None:intergenic
TCAACCAATCTTGGGCTCCA+GGG 0.504298 4_4:+79304756 None:intergenic
CTACCTGAAATTCTTTCAGT+AGG 0.506228 4_4:+79308883 None:intergenic
CTGTTGGCGACCTTAAACCT+TGG 0.507487 4_4:-79304398 Msa0706350:CDS
CAGCAGCAAACATATGGGTT+AGG 0.507985 4_4:+79305915 None:intergenic
TCTCATGAAAGATATTAGTC+TGG 0.508501 4_4:-79303725 Msa0706350:three_prime_UTR
TGTGAGTATGGTATCCAACT+TGG 0.508722 4_4:+79304620 None:intergenic
AGGTAGGGTGGTAGATAGCT+TGG 0.508805 4_4:-79303676 Msa0706350:three_prime_UTR
TGCTGCAAAAGAAGTAGTAA+AGG 0.509311 4_4:+79309032 None:intergenic
GACTGTTAAAACTGCTACCA+AGG 0.509613 4_4:+79304381 None:intergenic
CTGCTGAGATCTTTATGCAC+CGG 0.510746 4_4:-79305898 Msa0706350:CDS
GCCATTTGGTGTCAAGTCAC+AGG 0.510932 4_4:+79305802 None:intergenic
AGGGGTATTGTAATTGTGTG+GGG 0.512295 4_4:+79316354 None:intergenic
CGAGGCGACTTAAAGGGTAA+AGG 0.512868 4_4:+79305776 None:intergenic
CTCCTGATTGTGCGGGTTGG+GGG 0.514631 4_4:+79304523 None:intergenic
GCAATACCGTGGGAAGAGAT+CGG 0.515153 4_4:-79304669 Msa0706350:CDS
GCTGCAAAAGAAGTAGTAAA+GGG 0.516288 4_4:+79309033 None:intergenic
TCTGGCTTGCTTAGAAGAAA+CGG 0.518888 4_4:-79303886 Msa0706350:three_prime_UTR
TGGTTCAAACATTTGGGCAG+AGG 0.523047 4_4:-79305459 Msa0706350:CDS
AAGAGCTTGAATTGGACTGC+TGG 0.524717 4_4:-79304423 Msa0706350:CDS
CACGGAAGTTGCCACATGAC+AGG 0.525758 4_4:-79304470 Msa0706350:CDS
GAACTAATTGTAGGTAGTGC+TGG 0.526058 4_4:-79306037 Msa0706350:intron
CAGCGCTAGATAAGAGAAAC+CGG 0.530862 4_4:+79305879 None:intergenic
TAAAGAATCATAATCGCCTC+AGG 0.531284 4_4:+79304359 None:intergenic
AAGAAGGTTAAGGTGTCGTA+AGG 0.533148 4_4:+79316121 None:intergenic
ATGGCACTTCTCATCATTCG+AGG 0.534980 4_4:+79305758 None:intergenic
AAAACTCCAAAATAATAAAG+TGG 0.535449 4_4:+79303767 None:intergenic
TGAGCAGGATGTTCCCAAGT+TGG 0.535887 4_4:-79304634 Msa0706350:CDS
CAACATCATAAAACAGTCCT+CGG 0.537401 4_4:+79305323 None:intergenic
AAGGGAAAGTAGTTGTGTTG+TGG 0.539252 4_4:+79316140 None:intergenic
CCCAAAATGTTCATAGGGGT+CGG 0.539812 4_4:-79304317 Msa0706350:three_prime_UTR
ATGTCCTCGTAATATGTTGT+TGG 0.543592 4_4:+79304819 None:intergenic
TCCCACCAGAAGTTATACTA+AGG 0.543860 4_4:-79304593 Msa0706350:CDS
TTGATGCTGTTGAGCTTCGT+AGG 0.545962 4_4:-79308912 Msa0706350:CDS
CCCAAGATTGGTTGAAGCTG+TGG 0.547702 4_4:-79304748 Msa0706350:CDS
TGGGAGATTTCTTAGAAATG+GGG 0.550635 4_4:+79316160 None:intergenic
TGATGTATTGGAAGATGATC+CGG 0.554892 4_4:-79306014 Msa0706350:CDS
TTCTAGTTTATTCTCCAGGT+AGG 0.556035 4_4:-79303692 Msa0706350:three_prime_UTR
AAGGTAGCACGCCGCAGCAG+CGG 0.559783 4_4:+79305481 None:intergenic
GATCTCAGCAGCAAACATAT+GGG 0.560809 4_4:+79305910 None:intergenic
GAAGAGAAGGCAATTGAAAG+AGG 0.561536 4_4:-79305511 Msa0706350:CDS
GCTAAAATCTAAATACTGGA+AGG 0.562081 4_4:+79303859 None:intergenic
TCCACTATTTGACATTTCGA+CGG 0.565695 4_4:-79304847 Msa0706350:CDS
AGTCACAGGTGGTGTATACA+GGG 0.565897 4_4:+79305816 None:intergenic
GAAGGCATCTCCTGATTGTG+CGG 0.568643 4_4:+79304515 None:intergenic
CTCTTCCCACGGTATTGCAT+CGG 0.576123 4_4:+79304674 None:intergenic
AGGAGTGTATTCTTGAAACA+AGG 0.576573 4_4:-79304450 Msa0706350:CDS
TGGAAGATGATCCGGTTGGA+AGG 0.577407 4_4:-79306006 Msa0706350:CDS
TCCATTTAGAACTTGATGGA+AGG 0.586348 4_4:+79304497 None:intergenic
AATCATGTGTGCTTGAAAGA+TGG 0.587027 4_4:-79305436 Msa0706350:CDS
AGTTTATTCTCCAGGTAGGG+TGG 0.587529 4_4:-79303688 Msa0706350:three_prime_UTR
TTCTGTGGTGGAGCATATGG+AGG 0.588062 4_4:+79305400 None:intergenic
CTGAAGGTGGTTATTATGCA+AGG 0.592317 4_4:-79305291 Msa0706350:intron
TCCGTCGAAATGTCAAATAG+TGG 0.596017 4_4:+79304846 None:intergenic
AACCAATCTTGGGCTCCAGG+GGG 0.599952 4_4:+79304758 None:intergenic
CCTTATTGGAACCGAACAGA+GGG 0.603172 4_4:-79305713 Msa0706350:CDS
GTGAGTATGGTATCCAACTT+GGG 0.606039 4_4:+79304621 None:intergenic
GAGGGATTCTTCCGCTGCTG+CGG 0.606476 4_4:-79305492 Msa0706350:CDS
GAGGTGCAAGAGCAGCGGTG+TGG 0.609121 4_4:-79304887 Msa0706350:CDS
AAGAAGATGAAGATTGACGA+AGG 0.609486 4_4:+79316313 None:intergenic
AGGAACCACAAAGAAATGAT+CGG 0.611291 4_4:+79305688 None:intergenic
AAGAGAAGGCAATTGAAAGA+GGG 0.624340 4_4:-79305510 Msa0706350:CDS
TTCATAGGGGTCGGTAACCG+AGG 0.626269 4_4:-79304308 Msa0706350:three_prime_UTR
AAGGTTTAAGGTCGCCAACA+GGG 0.626386 4_4:+79304400 None:intergenic
GGGTCTTATCAGGAATCAAG+TGG 0.630713 4_4:+79305368 None:intergenic
AAGTTCTAAATGGACTTGCA+CGG 0.631519 4_4:-79304488 Msa0706350:CDS
AAGGCATCTCCTGATTGTGC+GGG 0.633255 4_4:+79304516 None:intergenic
TGGTGGAGCATATGGAGGAA+TGG 0.634234 4_4:+79305405 None:intergenic
GCCTTATTGGAACCGAACAG+AGG 0.636673 4_4:-79305714 Msa0706350:CDS
AAACGGTAGAACAATATCAT+CGG 0.636948 4_4:+79304698 None:intergenic
AGAGACAGGTTAGAAGAGTG+AGG 0.637698 4_4:+79316236 None:intergenic
ATTTGGTGTCAAGTCACAGG+TGG 0.641622 4_4:+79305805 None:intergenic
AAGAATACACTCCTGTCATG+TGG 0.646047 4_4:+79304459 None:intergenic
AGAAGGTTAAGGTGTCGTAA+GGG 0.647502 4_4:+79316122 None:intergenic
CTGCCCAAATGTTTGAACCA+AGG 0.647947 4_4:+79305462 None:intergenic
AAGTTGAAAATGGAAGAGTG+TGG 0.648104 4_4:+79316284 None:intergenic
AACACCCCGATCTCTTCCCA+CGG 0.650716 4_4:+79304663 None:intergenic
GGAGTGTATTCTTGAAACAA+GGG 0.652265 4_4:-79304449 Msa0706350:CDS
GTTTGCCGATGCAATACCGT+GGG 0.652759 4_4:-79304679 Msa0706350:CDS
TAAAGAGAAAAGCAACACAA+AGG 0.657048 4_4:+79308938 None:intergenic
AAACATGCCCCAAAGTCATG+AGG 0.658104 4_4:+79305668 None:intergenic
GGTCTTATCAGGAATCAAGT+GGG 0.661427 4_4:+79305369 None:intergenic
AATACCGTGGGAAGAGATCG+GGG 0.662810 4_4:-79304667 Msa0706350:CDS
TAACAGAGGTGCAAGAGCAG+CGG 0.662972 4_4:-79304892 Msa0706350:intron
AAGTGGGCATAGACAAAACA+CGG 0.670823 4_4:+79304788 None:intergenic
TTTCAATGGAATTAGCTGGA+AGG 0.674164 4_4:+79316183 None:intergenic
CGTTTGCCGATGCAATACCG+TGG 0.699810 4_4:-79304680 Msa0706350:CDS
GCATCCAACAACATATTACG+AGG 0.700041 4_4:-79304823 Msa0706350:CDS
GAGTGTATTCTTGAAACAAG+GGG 0.700993 4_4:-79304448 Msa0706350:CDS
GTTGGAAATGACCCTGAAGG+TGG 0.701807 4_4:-79305304 Msa0706350:CDS
CCTCCCCAAAATGTTCATAG+GGG 0.703947 4_4:-79304321 Msa0706350:three_prime_UTR
GCGACTTAAAGGGTAAAGGG+AGG 0.710948 4_4:+79305780 None:intergenic
GATGTTGGAAATGACCCTGA+AGG 0.717539 4_4:-79305307 Msa0706350:CDS
GTATTGGAAGATGATCCGGT+TGG 0.718257 4_4:-79306010 Msa0706350:CDS
GTCACAGGTGGTGTATACAG+GGG 0.728508 4_4:+79305817 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTTTAAAATTATCTACA+TGG - chr4_4:79305000-79305019 Msa0706350:intron 10.0%
!!! ATGGATTTTTTTTTTTTAAA+AGG - chr4_4:79309473-79309492 Msa0706350:intron 10.0%
!!! AATTTTTATCAATTTCTTTA+TGG - chr4_4:79311229-79311248 Msa0706350:intron 10.0%
!! TTTGAAAATTTATAATTGTA+CGG - chr4_4:79312036-79312055 Msa0706350:intron 10.0%
!!! TTTTATTATTATTTTGTTTC+AGG - chr4_4:79314520-79314539 Msa0706350:intron 10.0%
!!! TTTTTCTTCCAATAAAAAAT+GGG - chr4_4:79304017-79304036 Msa0706350:three_prime_UTR 15.0%
!! TAAAATTAAAATTGCAAGTT+TGG + chr4_4:79304988-79305007 None:intergenic 15.0%
!!! TATTTTAAGACATATCTTTT+AGG - chr4_4:79305454-79305473 Msa0706350:CDS 15.0%
!!! ATTTTAAGACATATCTTTTA+GGG - chr4_4:79305455-79305474 Msa0706350:CDS 15.0%
!!! ATTTTCTTGTTATATTTACT+TGG + chr4_4:79305900-79305919 None:intergenic 15.0%
!!! CTTATTTTTATGAACATTTA+GGG + chr4_4:79307503-79307522 None:intergenic 15.0%
!!! CATTGTAAATTTTGATATTT+TGG - chr4_4:79307564-79307583 Msa0706350:intron 15.0%
!!! TCATTTTTCAAATTGTTTAT+TGG - chr4_4:79309097-79309116 Msa0706350:intron 15.0%
!! ATAATTGATATAAGTAACAA+AGG + chr4_4:79309386-79309405 None:intergenic 15.0%
!! AAAAAAAAAAATCCATACAA+AGG + chr4_4:79309469-79309488 None:intergenic 15.0%
!! CATAAAATATAATACTGATA+GGG + chr4_4:79309733-79309752 None:intergenic 15.0%
!! TCATAAAATATAATACTGAT+AGG + chr4_4:79309734-79309753 None:intergenic 15.0%
!!! ACTATTTTAAGCAATATTTT+TGG - chr4_4:79309768-79309787 Msa0706350:intron 15.0%
!! TTATAAATTCACAATAAAAG+TGG - chr4_4:79309870-79309889 Msa0706350:intron 15.0%
!!! AAATTTTGAACTTTTTTTTC+TGG - chr4_4:79310259-79310278 Msa0706350:intron 15.0%
!!! AATTTGATAATTTTGTAAAG+AGG - chr4_4:79310457-79310476 Msa0706350:intron 15.0%
!! TAATATAAAGAAGTCAAATT+TGG + chr4_4:79303965-79303984 None:intergenic 15.0%
!!! ATAAAGTTTATTCTTTTCTT+GGG - chr4_4:79311049-79311068 Msa0706350:intron 15.0%
!!! TGATTTGATTATTTTTGTTT+AGG - chr4_4:79311201-79311220 Msa0706350:intron 15.0%
!! TAATCATTGAAATTATAACA+TGG + chr4_4:79311405-79311424 None:intergenic 15.0%
!! GTTATAATTTCAATGATTAA+AGG - chr4_4:79311406-79311425 Msa0706350:intron 15.0%
!! TTTGATGTTTAAATATTAGT+TGG + chr4_4:79311635-79311654 None:intergenic 15.0%
!!! TTCAAAAAACATTTATTTTG+AGG + chr4_4:79311873-79311892 None:intergenic 15.0%
!! TTGAAAATTTATAATTGTAC+GGG - chr4_4:79312037-79312056 Msa0706350:intron 15.0%
!!! ATTGATTATTGATTGAAAAA+AGG - chr4_4:79312217-79312236 Msa0706350:intron 15.0%
!!! TAATAAGAAAATTTTGCAAA+AGG - chr4_4:79314105-79314124 Msa0706350:intron 15.0%
!!! TAAAATAAAAGTGTGTTATA+TGG + chr4_4:79314505-79314524 None:intergenic 15.0%
!!! ACATTGTAAATTTTGATATA+CGG - chr4_4:79315784-79315803 Msa0706350:intron 15.0%
!!! CATTTTTTATTGGAAGAAAA+AGG + chr4_4:79304018-79304037 None:intergenic 20.0%
!!! CTTTTTCTTCCAATAAAAAA+TGG - chr4_4:79304016-79304035 Msa0706350:three_prime_UTR 20.0%
!!! ATTTCCAAATTCAGTTTTTT+AGG - chr4_4:79304041-79304060 Msa0706350:three_prime_UTR 20.0%
!!! TTTCCAAATTCAGTTTTTTA+GGG - chr4_4:79304042-79304061 Msa0706350:three_prime_UTR 20.0%
!! ATGGCAAACAAAAAAAAAAA+TGG + chr4_4:79304173-79304192 None:intergenic 20.0%
!! AAATAAAATGGTGATAATCA+TGG + chr4_4:79304755-79304774 None:intergenic 20.0%
!!! TGATTATCACCATTTTATTT+AGG - chr4_4:79304755-79304774 Msa0706350:CDS 20.0%
!! AAATAAAATGGTGATAATCA+TGG + chr4_4:79304755-79304774 None:intergenic 20.0%
!!! TGATTATCACCATTTTATTT+AGG - chr4_4:79304755-79304774 Msa0706350:CDS 20.0%
!! TATCAGAACATATCAAATAA+GGG + chr4_4:79305209-79305228 None:intergenic 20.0%
!! GATCAAGTAATTTAATTCTT+GGG + chr4_4:79305574-79305593 None:intergenic 20.0%
!! TGATCAAGTAATTTAATTCT+TGG + chr4_4:79305575-79305594 None:intergenic 20.0%
!!! ATTTTATTTTCGAGAAATAG+TGG - chr4_4:79305695-79305714 Msa0706350:CDS 20.0%
!!! AACATAAACTATTTTGTTTC+AGG - chr4_4:79306326-79306345 Msa0706350:intron 20.0%
!!! TTTTGTGTCGTTATTAAAAT+TGG - chr4_4:79306744-79306763 Msa0706350:intron 20.0%
!!! ATTGATGACCTAAATAAAAT+TGG - chr4_4:79306798-79306817 Msa0706350:intron 20.0%
!!! TGAACAAACCAATTTTATTT+AGG + chr4_4:79306809-79306828 None:intergenic 20.0%
!!! CCTTATTTTTATGAACATTT+AGG + chr4_4:79307504-79307523 None:intergenic 20.0%
!! CCTAAATGTTCATAAAAATA+AGG - chr4_4:79307501-79307520 Msa0706350:intron 20.0%
!! ATCAAATTTCAAGATTAGAA+TGG - chr4_4:79307760-79307779 Msa0706350:intron 20.0%
!! TCAAATTTCAAGATTAGAAT+GGG - chr4_4:79307761-79307780 Msa0706350:intron 20.0%
!!! TTGAATGACTTTTGTAATAA+TGG - chr4_4:79307868-79307887 Msa0706350:intron 20.0%
!! TCATTGTAACAAAAAAACAA+AGG + chr4_4:79308405-79308424 None:intergenic 20.0%
!! ACTTATAATTGTCAGTATTT+AGG - chr4_4:79308502-79308521 Msa0706350:intron 20.0%
!! CTTATAATTGTCAGTATTTA+GGG - chr4_4:79308503-79308522 Msa0706350:intron 20.0%
!!! AGAGAAAACATTTTATGTTT+TGG + chr4_4:79308895-79308914 None:intergenic 20.0%
!!! TTATATTTTATGAGTGTGAT+TGG - chr4_4:79309741-79309760 Msa0706350:intron 20.0%
!!! ATCTATATATGCAATTTTAG+TGG - chr4_4:79310038-79310057 Msa0706350:intron 20.0%
!!! CTTTTTGTTTTATCTAAAGT+TGG + chr4_4:79310497-79310516 None:intergenic 20.0%
!!! CATAAAGTTTATTCTTTTCT+TGG - chr4_4:79311048-79311067 Msa0706350:intron 20.0%
!!! TAAAGTTTATTCTTTTCTTG+GGG - chr4_4:79311050-79311069 Msa0706350:intron 20.0%
!! TTATCAATTTCTTTATGGTT+AGG - chr4_4:79311234-79311253 Msa0706350:intron 20.0%
!! TATTATGAATGTGTTTGATT+AGG - chr4_4:79311324-79311343 Msa0706350:intron 20.0%
!! AATTTCAATGATTAAAGGAT+TGG - chr4_4:79311411-79311430 Msa0706350:intron 20.0%
!! TTAAAACATTTCCTTAGATT+AGG - chr4_4:79311542-79311561 Msa0706350:intron 20.0%
!!! CTTTAGGGTTAATTAATAAT+TGG + chr4_4:79311607-79311626 None:intergenic 20.0%
!!! TTAAAGGTTTGTTAAAAACT+TGG + chr4_4:79311820-79311839 None:intergenic 20.0%
!! TTAGATAGAACATCAATATA+GGG + chr4_4:79312370-79312389 None:intergenic 20.0%
!!! CTCTAAGATACAAATTTTAA+GGG + chr4_4:79312685-79312704 None:intergenic 20.0%
!!! TCTCTAAGATACAAATTTTA+AGG + chr4_4:79312686-79312705 None:intergenic 20.0%
!!! AATTCAGAAATGGAAATTTT+TGG + chr4_4:79312867-79312886 None:intergenic 20.0%
!! AATTTCCATTTCTGAATTAA+TGG - chr4_4:79312869-79312888 Msa0706350:intron 20.0%
!! ATTTCCATTTCTGAATTAAT+GGG - chr4_4:79312870-79312889 Msa0706350:intron 20.0%
!! TAACAAAACATTTCTTAAAC+TGG + chr4_4:79313388-79313407 None:intergenic 20.0%
!!! TAAGCTTCTAAAACAATTAA+TGG + chr4_4:79313581-79313600 None:intergenic 20.0%
!!! TAATAGATTGGTAATTTCTA+AGG - chr4_4:79313762-79313781 Msa0706350:intron 20.0%
!!! TATATATTCTAAGCATTTTG+TGG - chr4_4:79313991-79314010 Msa0706350:intron 20.0%
!!! ATTTTCTTATTATACTTGCT+TGG + chr4_4:79314097-79314116 None:intergenic 20.0%
!! ATTTGAAGAAATAAGTTGTA+TGG + chr4_4:79314317-79314336 None:intergenic 20.0%
!!! TACAACTTATTTCTTCAAAT+TGG - chr4_4:79314317-79314336 Msa0706350:intron 20.0%
!! TTATGATTCTTTATATGTCT+TGG - chr4_4:79315704-79315723 Msa0706350:intron 20.0%
!!! CATTGTAAATTTTGATATAC+GGG - chr4_4:79315785-79315804 Msa0706350:intron 20.0%
!!! TGATTACCACTTTATTATTT+TGG - chr4_4:79316280-79316299 Msa0706350:five_prime_UTR 20.0%
!! AAAACTCCAAAATAATAAAG+TGG + chr4_4:79316289-79316308 None:intergenic 20.0%
!! TTTTTATTGGAAGAAAAAGG+TGG + chr4_4:79304015-79304034 None:intergenic 25.0%
!!! TGGAAATACCCATTTTTTAT+TGG + chr4_4:79304028-79304047 None:intergenic 25.0%
! AAACCCTAAAAAACTGAATT+TGG + chr4_4:79304048-79304067 None:intergenic 25.0%
! ATCAACATAACTATAGAACA+TGG + chr4_4:79304192-79304211 None:intergenic 25.0%
!!! ATAGTTATGTTGATTTGAGT+TGG - chr4_4:79304198-79304217 Msa0706350:three_prime_UTR 25.0%
!! GGTTTGAATTTTTCATGTTA+TGG - chr4_4:79304261-79304280 Msa0706350:three_prime_UTR 25.0%
! TATTTATTGCATCAATTGAC+TGG - chr4_4:79304376-79304395 Msa0706350:exon 25.0%
! AGTTGCAACTAATATATAAC+TGG + chr4_4:79304786-79304805 None:intergenic 25.0%
! AGTTGCAACTAATATATAAC+TGG + chr4_4:79304786-79304805 None:intergenic 25.0%
!!! ATGGTTGAATTTTTTGAAGA+TGG - chr4_4:79305019-79305038 Msa0706350:intron 25.0%
!! ATCATATCCTGTATTTTTCA+AGG - chr4_4:79305172-79305191 Msa0706350:intron 25.0%
! GTATCAGAACATATCAAATA+AGG + chr4_4:79305210-79305229 None:intergenic 25.0%
! AAAGATAATCCAAGCAAATT+GGG - chr4_4:79305318-79305337 Msa0706350:CDS 25.0%
!! CATAACTTTCATGTTTTCAT+TGG + chr4_4:79305377-79305396 None:intergenic 25.0%
! CAATGAAAACATGAAAGTTA+TGG - chr4_4:79305375-79305394 Msa0706350:CDS 25.0%
! TGGTAATCTAATATATCCAA+TGG - chr4_4:79305395-79305414 Msa0706350:CDS 25.0%
!!! TCTTGTGTATTGTTTCTAAT+TGG - chr4_4:79305660-79305679 Msa0706350:CDS 25.0%
! TAACAAGAAAATTCTGCAAA+AGG - chr4_4:79305908-79305927 Msa0706350:CDS 25.0%
! GTTTGAAGAAATAAGTTGTA+TGG + chr4_4:79306120-79306139 None:intergenic 25.0%
!! TACAACTTATTTCTTCAAAC+TGG - chr4_4:79306120-79306139 Msa0706350:intron 25.0%
!!! TTCTCAAGATAGCTTTAAAA+TGG + chr4_4:79306265-79306284 None:intergenic 25.0%
! AAGTATACAAAAATAGACCT+GGG + chr4_4:79306516-79306535 None:intergenic 25.0%
! AAAGTATACAAAAATAGACC+TGG + chr4_4:79306517-79306536 None:intergenic 25.0%
!!! TCTATTTTTGTATACTTTCG+AGG - chr4_4:79306519-79306538 Msa0706350:intron 25.0%
!! TGTGATTTTCAATTTTACAG+AGG - chr4_4:79306910-79306929 Msa0706350:intron 25.0%
! TATCATCTGCAATAATAACA+GGG + chr4_4:79307107-79307126 None:intergenic 25.0%
! ATATCATCTGCAATAATAAC+AGG + chr4_4:79307108-79307127 None:intergenic 25.0%
! TGTTTCCTTAATATAACTTC+TGG + chr4_4:79307231-79307250 None:intergenic 25.0%
!! ATTTTTATGAACATTTAGGG+AGG + chr4_4:79307500-79307519 None:intergenic 25.0%
! ATGTTCATAAAAATAAGGCT+TGG - chr4_4:79307506-79307525 Msa0706350:intron 25.0%
! CATACTAGATTAGGTAATTT+GGG - chr4_4:79307698-79307717 Msa0706350:intron 25.0%
! GATTCATTAATATGAACACA+TGG + chr4_4:79307838-79307857 None:intergenic 25.0%
!!! ACTTTTGTAATAATGGAAGT+TGG - chr4_4:79307875-79307894 Msa0706350:intron 25.0%
!!! CTTCTAATTCTAGAATTGAT+TGG - chr4_4:79307973-79307992 Msa0706350:intron 25.0%
!! TTCTGATGTGAAAATTTTGT+TGG + chr4_4:79308060-79308079 None:intergenic 25.0%
!!! CATTCAATTTTAGTTAACCA+AGG + chr4_4:79308132-79308151 None:intergenic 25.0%
! CTTGGTTAACTAAAATTGAA+TGG - chr4_4:79308130-79308149 Msa0706350:intron 25.0%
!!! TGATTAGTTTCCAAATCTAT+CGG + chr4_4:79308186-79308205 None:intergenic 25.0%
!!! ATGGATTTTCTTTTTTGAGA+AGG + chr4_4:79308229-79308248 None:intergenic 25.0%
! CAAAGGTTTAAAGAAATGAA+AGG + chr4_4:79308388-79308407 None:intergenic 25.0%
!! CGACTTGTAATTTTTCTTTT+AGG - chr4_4:79308469-79308488 Msa0706350:intron 25.0%
! ATAACGATTAAAGGAAATGA+AGG + chr4_4:79308855-79308874 None:intergenic 25.0%
!!! ATTTTATGTTTTGGTGGAAT+TGG + chr4_4:79308886-79308905 None:intergenic 25.0%
!!! GAAAACATTTTATGTTTTGG+TGG + chr4_4:79308892-79308911 None:intergenic 25.0%
! AGAACCATAATAAGATGATA+TGG - chr4_4:79308965-79308984 Msa0706350:CDS 25.0%
! AAAGTAGATTACTAACATCA+TGG + chr4_4:79309138-79309157 None:intergenic 25.0%
! ACTTAAATGTTTACTCCTTT+AGG + chr4_4:79309224-79309243 None:intergenic 25.0%
! TAAATTCACAATAAAAGTGG+AGG - chr4_4:79309873-79309892 Msa0706350:intron 25.0%
!!! AAATTCTGAAATTGTTACGT+TGG + chr4_4:79309928-79309947 None:intergenic 25.0%
!! GATTTTATTGCAAACATGTT+TGG + chr4_4:79310333-79310352 None:intergenic 25.0%
! AGAATACTGAAACTTATAGT+TGG - chr4_4:79310402-79310421 Msa0706350:intron 25.0%
! AAAGAAACAGAGTTGAAAAT+TGG + chr4_4:79310860-79310879 None:intergenic 25.0%
! GAACTAAAAAAATGGGTATT+TGG - chr4_4:79311072-79311091 Msa0706350:intron 25.0%
! AAAAATGGGTATTTGGAAAT+TGG - chr4_4:79311079-79311098 Msa0706350:intron 25.0%
! AAAATGGGTATTTGGAAATT+GGG - chr4_4:79311080-79311099 Msa0706350:intron 25.0%
!!! TATTTGGAAATTGGGTTTTT+TGG - chr4_4:79311088-79311107 Msa0706350:intron 25.0%
!!! ATTTGGAAATTGGGTTTTTT+GGG - chr4_4:79311089-79311108 Msa0706350:intron 25.0%
! AATTTGATTGCTTCATGTTA+TGG - chr4_4:79311272-79311291 Msa0706350:intron 25.0%
!! AATGCTGTGTCTTTAATTTA+TGG - chr4_4:79311300-79311319 Msa0706350:intron 25.0%
!! CAATACTGTAACTACAATTT+TGG - chr4_4:79311492-79311511 Msa0706350:intron 25.0%
!!! TTGGTAGAACTTTTTTTTGT+TGG - chr4_4:79311511-79311530 Msa0706350:intron 25.0%
! TATTAGTTGGATGAACTTTA+GGG + chr4_4:79311622-79311641 None:intergenic 25.0%
! ATATTAGTTGGATGAACTTT+AGG + chr4_4:79311623-79311642 None:intergenic 25.0%
!!! CATTTATTTTGAGGTAAAGT+GGG + chr4_4:79311864-79311883 None:intergenic 25.0%
!!! ACATTTATTTTGAGGTAAAG+TGG + chr4_4:79311865-79311884 None:intergenic 25.0%
!! AAGTGAATCATATTTTGCAT+AGG - chr4_4:79311900-79311919 Msa0706350:intron 25.0%
! AATATATTTCGAATGCTCAT+TGG + chr4_4:79312132-79312151 None:intergenic 25.0%
! AACCTGAATTAACATAGAAA+AGG - chr4_4:79312193-79312212 Msa0706350:intron 25.0%
!! TTCCTTTTCTATGTTAATTC+AGG + chr4_4:79312198-79312217 None:intergenic 25.0%
! GTTAGATAGAACATCAATAT+AGG + chr4_4:79312371-79312390 None:intergenic 25.0%
!!! AAGAAATGTTTTGTTACAAC+AGG - chr4_4:79313392-79313411 Msa0706350:intron 25.0%
!!! AGAAATGTTTTGTTACAACA+GGG - chr4_4:79313393-79313412 Msa0706350:intron 25.0%
!!! CATTTTAGAATCATACTTTC+AGG + chr4_4:79313545-79313564 None:intergenic 25.0%
! AAAATTGGAGGAAGATTATT+CGG + chr4_4:79313643-79313662 None:intergenic 25.0%
!! TAATTTCTAAGGAATTCCTA+AGG - chr4_4:79313773-79313792 Msa0706350:intron 25.0%
!!! TTCTTGTGTTCTATTTTAGA+AGG - chr4_4:79313864-79313883 Msa0706350:intron 25.0%
!! TTTTTATAGCAAAACAGACT+CGG - chr4_4:79315091-79315110 Msa0706350:intron 25.0%
! TTACAATGTCCACAAAAAAA+GGG + chr4_4:79315773-79315792 None:intergenic 25.0%
! TTTACAATGTCCACAAAAAA+AGG + chr4_4:79315774-79315793 None:intergenic 25.0%
! TTGGAAAATAAGAGTCATAA+TGG - chr4_4:79315929-79315948 Msa0706350:intron 25.0%
!!! ATTTAGATTTTAGCAGGATT+TGG - chr4_4:79316203-79316222 Msa0706350:five_prime_UTR 25.0%
CAAATTTAGTCAACAGAAGA+AGG + chr4_4:79303951-79303970 None:intergenic 30.0%
! TTGAGGTTGATTAGGAATTT+AGG - chr4_4:79304352-79304371 Msa0706350:three_prime_UTR 30.0%
!!! GAGACTCGTTTTTTAAGAAA+AGG - chr4_4:79304590-79304609 Msa0706350:CDS 30.0%
GCAACTAATATATAACTGGA+AGG + chr4_4:79304782-79304801 None:intergenic 30.0%
GCAACTAATATATAACTGGA+AGG + chr4_4:79304782-79304801 None:intergenic 30.0%
ATGATGAGCTAAAGAAGTAA+TGG + chr4_4:79304959-79304978 None:intergenic 30.0%
TAAGAGACATGTTCTTAGTT+TGG - chr4_4:79305078-79305097 Msa0706350:intron 30.0%
ATACAGGATATGATACGTTT+AGG + chr4_4:79305166-79305185 None:intergenic 30.0%
!!! ATCCTGTATTTTTCAAGGAA+TGG - chr4_4:79305177-79305196 Msa0706350:intron 30.0%
! AACTAGTTTAAGAGTTTGGA+AGG - chr4_4:79305267-79305286 Msa0706350:intron 30.0%
TTTGCTTGGATTATCTTTGA+AGG + chr4_4:79305316-79305335 None:intergenic 30.0%
CAAAGATAATCCAAGCAAAT+TGG - chr4_4:79305317-79305336 Msa0706350:CDS 30.0%
ACGACCTATTAATTATCCTA+AGG + chr4_4:79305345-79305364 None:intergenic 30.0%
ATTTAATTCTTGGGCAAAGT+GGG + chr4_4:79305565-79305584 None:intergenic 30.0%
AATTTAATTCTTGGGCAAAG+TGG + chr4_4:79305566-79305585 None:intergenic 30.0%
TTAGAAACAATACACAAGAC+TGG + chr4_4:79305659-79305678 None:intergenic 30.0%
AGAGATTACTAAGCATATTG+TGG - chr4_4:79305794-79305813 Msa0706350:CDS 30.0%
ATCATTCGTGGTGATTTAAA+GGG + chr4_4:79306089-79306108 None:intergenic 30.0%
TATATACTAGATCTCGTACT+TGG + chr4_4:79306220-79306239 None:intergenic 30.0%
!! TATTTTGTTTCAGGAAGAGA+AGG - chr4_4:79306335-79306354 Msa0706350:intron 30.0%
! GATTTTATCAGGAATTAGGT+GGG + chr4_4:79306493-79306512 None:intergenic 30.0%
AGTATACAAAAATAGACCTG+GGG + chr4_4:79306515-79306534 None:intergenic 30.0%
ATAATCCTGACTATTCAAAC+TGG - chr4_4:79306886-79306905 Msa0706350:intron 30.0%
TCAGTAGAAATGTCAAATAG+TGG + chr4_4:79306973-79306992 None:intergenic 30.0%
TGTCCTCATAATATGTTGTT+GGG + chr4_4:79306999-79307018 None:intergenic 30.0%
ATGTCCTCATAATATGTTGT+TGG + chr4_4:79307000-79307019 None:intergenic 30.0%
TCCTTAATATAACTTCTGGT+CGG + chr4_4:79307227-79307246 None:intergenic 30.0%
! ACAGTTGTAGTAGTTTTCTT+AGG - chr4_4:79307442-79307461 Msa0706350:intron 30.0%
! CAGGATAATTTTACATGTCT+TGG - chr4_4:79307469-79307488 Msa0706350:intron 30.0%
GCATACTAGATTAGGTAATT+TGG - chr4_4:79307697-79307716 Msa0706350:intron 30.0%
! TGGATAATCAAAGTATTCTC+AGG - chr4_4:79307730-79307749 Msa0706350:intron 30.0%
! ATAATCAAAGTATTCTCAGG+TGG - chr4_4:79307733-79307752 Msa0706350:intron 30.0%
!!! CAATTTTAGTTAACCAAGGT+TGG + chr4_4:79308128-79308147 None:intergenic 30.0%
!!! CTTTTTTGAGAAGGCAATTA+TGG + chr4_4:79308220-79308239 None:intergenic 30.0%
TTCATTCCTTCAAAAACAAG+TGG + chr4_4:79308434-79308453 None:intergenic 30.0%
TAAAGGAAATGAAGGTTGTT+AGG + chr4_4:79308847-79308866 None:intergenic 30.0%
GAAAATGGGATAACGATTAA+AGG + chr4_4:79308864-79308883 None:intergenic 30.0%
! TTTTGGTGGAATTGGAAAAT+GGG + chr4_4:79308878-79308897 None:intergenic 30.0%
TTATGGTTCTCATTACCAAA+GGG + chr4_4:79308955-79308974 None:intergenic 30.0%
ATTATGGTTCTCATTACCAA+AGG + chr4_4:79308956-79308975 None:intergenic 30.0%
ACTCCTATACAAACAACTAA+GGG + chr4_4:79308992-79309011 None:intergenic 30.0%
AACTCCTATACAAACAACTA+AGG + chr4_4:79308993-79309012 None:intergenic 30.0%
! TAGTTTGCCCTCTTTATTAT+TGG - chr4_4:79309050-79309069 Msa0706350:five_prime_UTR 30.0%
GCCTATTCCAATAATAAAGA+GGG + chr4_4:79309060-79309079 None:intergenic 30.0%
AGCCTATTCCAATAATAAAG+AGG + chr4_4:79309061-79309080 None:intergenic 30.0%
AAATTGTTTATTGGTGCATG+TGG - chr4_4:79309106-79309125 Msa0706350:intron 30.0%
!! TTTTTGAATTGTTGCTGCTT+TGG - chr4_4:79309168-79309187 Msa0706350:intron 30.0%
!! GGAGTAAACATTTAAGTTGA+AGG - chr4_4:79309227-79309246 Msa0706350:intron 30.0%
!! CATTTAAGTTGAAGGCTATA+TGG - chr4_4:79309235-79309254 Msa0706350:intron 30.0%
! ACTGATACTATTTCTCTTGA+AGG - chr4_4:79309275-79309294 Msa0706350:intron 30.0%
! CTGATACTATTTCTCTTGAA+GGG - chr4_4:79309276-79309295 Msa0706350:intron 30.0%
! TGATACTATTTCTCTTGAAG+GGG - chr4_4:79309277-79309296 Msa0706350:intron 30.0%
ATACAAAGGATAGACTTGAA+TGG + chr4_4:79309455-79309474 None:intergenic 30.0%
ATTCAAGTCTATCCTTTGTA+TGG - chr4_4:79309454-79309473 Msa0706350:intron 30.0%
AAATATAATACTGATAGGGC+TGG + chr4_4:79309729-79309748 None:intergenic 30.0%
!!! AGAATTTTGTCGATTCAACT+AGG - chr4_4:79309941-79309960 Msa0706350:intron 30.0%
! AATGTAAAACTGGATTTTGC+TGG + chr4_4:79310807-79310826 None:intergenic 30.0%
TCAAATTTGGTCAAAGAAGA+AGG + chr4_4:79310985-79311004 None:intergenic 30.0%
TTCTTGGGGAACTAAAAAAA+TGG - chr4_4:79311064-79311083 Msa0706350:intron 30.0%
TCTTGGGGAACTAAAAAAAT+GGG - chr4_4:79311065-79311084 Msa0706350:intron 30.0%
!!! TTTGGAAATTGGGTTTTTTG+GGG - chr4_4:79311090-79311109 Msa0706350:intron 30.0%
TAAAGAGAAAAGCAACACAA+AGG + chr4_4:79311118-79311137 None:intergenic 30.0%
! AGTTACAGTATTGAACTAGA+AGG + chr4_4:79311485-79311504 None:intergenic 30.0%
!! ACAAACCTTTAAGACTTTCA+AGG - chr4_4:79311828-79311847 Msa0706350:intron 30.0%
TTTCACCTTGAAAGTCTTAA+AGG + chr4_4:79311836-79311855 None:intergenic 30.0%
TTTGCTTGCATTGTCTTTAA+AGG + chr4_4:79312070-79312089 None:intergenic 30.0%
AACAAGAAAGATAGCTATGA+GGG - chr4_4:79312917-79312936 Msa0706350:intron 30.0%
! TATTTTGCTACCTATACTAC+AGG + chr4_4:79312966-79312985 None:intergenic 30.0%
! TTGCAAAGTATCAAACAGAA+GGG - chr4_4:79313190-79313209 Msa0706350:intron 30.0%
! ACAAGTACTTTTCTAACTCT+CGG - chr4_4:79313248-79313267 Msa0706350:intron 30.0%
ACTGGAAGAATTGTTAATTC+TGG + chr4_4:79313370-79313389 None:intergenic 30.0%
GGATATATATATGTTCAGCT+TGG + chr4_4:79313468-79313487 None:intergenic 30.0%
AACAATTAATGGCGTAAAGT+TGG + chr4_4:79313570-79313589 None:intergenic 30.0%
AATAATATATCCTTCCGCAA+GGG + chr4_4:79313711-79313730 None:intergenic 30.0%
TAATAATATATCCTTCCGCA+AGG + chr4_4:79313712-79313731 None:intergenic 30.0%
ATTAGTAATCTTGTGTCTGT+AGG - chr4_4:79313728-79313747 Msa0706350:intron 30.0%
TATGTACCAAACATATCCTT+AGG + chr4_4:79313792-79313811 None:intergenic 30.0%
ATAATAAATGTGCACATCCT+TGG - chr4_4:79313811-79313830 Msa0706350:intron 30.0%
!!! TGGAATTTTGAGGTGTTTAT+AGG - chr4_4:79313839-79313858 Msa0706350:intron 30.0%
GCATTAAGAAATTCTGTTTC+TGG - chr4_4:79313891-79313910 Msa0706350:intron 30.0%
TTTGTGGTTGAACTAATTGT+AGG - chr4_4:79314007-79314026 Msa0706350:intron 30.0%
!! TTTCTTCAAATTGGCCTTAT+TGG - chr4_4:79314326-79314345 Msa0706350:intron 30.0%
ACATATTCTAGACTCATACT+TGG + chr4_4:79314417-79314436 None:intergenic 30.0%
!! TATTTTGTTTCAGGAAGAGA+AGG - chr4_4:79306335-79306354 Msa0706350:intron 30.0%
AAGTACACAAAAATTGACCT+GGG + chr4_4:79314710-79314729 None:intergenic 30.0%
! AAATACCCTCATTTGAAGTT+TGG + chr4_4:79314805-79314824 None:intergenic 30.0%
TATTGTATGCATAAGAATGC+TGG - chr4_4:79314854-79314873 Msa0706350:intron 30.0%
GATGAACAAATAATCCTAAC+TGG - chr4_4:79315113-79315132 Msa0706350:intron 30.0%
ATATCATCGGCAATAATAAC+AGG + chr4_4:79315345-79315364 None:intergenic 30.0%
AAACGGTAGAACAATATCAT+CGG + chr4_4:79315358-79315377 None:intergenic 30.0%
TGTTTCCTTAGTATAACTTC+TGG + chr4_4:79315468-79315487 None:intergenic 30.0%
AGATCAATCATGTAGCAAAT+TGG + chr4_4:79315841-79315860 None:intergenic 30.0%
TTTCTTGTTCTGATGATAGT+TGG - chr4_4:79315966-79315985 Msa0706350:intron 30.0%
!!! CATATCATAGCTTGTTGTTT+TGG - chr4_4:79316054-79316073 Msa0706350:intron 30.0%
!!! TTGTTTTGGTAAACTTAGAG+TGG - chr4_4:79316068-79316087 Msa0706350:intron 30.0%
GCTAAAATCTAAATACTGGA+AGG + chr4_4:79316197-79316216 None:intergenic 30.0%
!! TCCAGTATTTAGATTTTAGC+AGG - chr4_4:79316197-79316216 Msa0706350:five_prime_UTR 30.0%
TCCTGCTAAAATCTAAATAC+TGG + chr4_4:79316201-79316220 None:intergenic 30.0%
!!! TCAGTGTTTTTTCTTTGACA+AGG - chr4_4:79316247-79316266 Msa0706350:five_prime_UTR 30.0%
TCTCATGAAAGATATTAGTC+TGG - chr4_4:79316328-79316347 Msa0706350:five_prime_UTR 30.0%
!! GTAATTCTAGTTTATTCTCC+AGG - chr4_4:79316357-79316376 Msa0706350:five_prime_UTR 30.0%
!!! TGAATTTTGCTGGTTTAGAG+GGG + chr4_4:79303720-79303739 None:intergenic 35.0%
!!! GTGAATTTTGCTGGTTTAGA+GGG + chr4_4:79303721-79303740 None:intergenic 35.0%
AAGAAGATGAAGATTGACGA+AGG + chr4_4:79303743-79303762 None:intergenic 35.0%
AAGTTGAAAATGGAAGAGTG+TGG + chr4_4:79303772-79303791 None:intergenic 35.0%
TTTCAATGGAATTAGCTGGA+AGG + chr4_4:79303873-79303892 None:intergenic 35.0%
TCTTAGAAATGGGGTTTCAA+TGG + chr4_4:79303887-79303906 None:intergenic 35.0%
TGGGAGATTTCTTAGAAATG+GGG + chr4_4:79303896-79303915 None:intergenic 35.0%
GTGGGAGATTTCTTAGAAAT+GGG + chr4_4:79303897-79303916 None:intergenic 35.0%
TGTGGGAGATTTCTTAGAAA+TGG + chr4_4:79303898-79303917 None:intergenic 35.0%
TAGTCAACAGAAGAAGGTTA+AGG + chr4_4:79303945-79303964 None:intergenic 35.0%
TCACCTGAAATTCTTTCAGT+AGG + chr4_4:79304125-79304144 None:intergenic 35.0%
! TGTGATCAATTTTTGTCTCG+TGG - chr4_4:79304239-79304258 Msa0706350:three_prime_UTR 35.0%
! GTGATCAATTTTTGTCTCGT+GGG - chr4_4:79304240-79304259 Msa0706350:three_prime_UTR 35.0%
TGTTTGATTAAGATCTGCTC+TGG - chr4_4:79304328-79304347 Msa0706350:three_prime_UTR 35.0%
TCAAACTAGCAGGATTGAAT+TGG + chr4_4:79304408-79304427 None:intergenic 35.0%
CATACTAGTATCAAACTAGC+AGG + chr4_4:79304418-79304437 None:intergenic 35.0%
GTGTTCCTTAGATTCAATGT+CGG - chr4_4:79304469-79304488 Msa0706350:CDS 35.0%
AATTGCCGACATTGAATCTA+AGG + chr4_4:79304477-79304496 None:intergenic 35.0%
ATTCAATGTCGGCAATTATG+AGG - chr4_4:79304480-79304499 Msa0706350:CDS 35.0%
! AGCATAATGCAGAGTATCAA+GGG + chr4_4:79304535-79304554 None:intergenic 35.0%
TGAGATGTGAAGTCATAAAG+AGG + chr4_4:79304653-79304672 None:intergenic 35.0%
CTGGAAGGACCTAAATAAAA+TGG + chr4_4:79304767-79304786 None:intergenic 35.0%
CTGGAAGGACCTAAATAAAA+TGG + chr4_4:79304767-79304786 None:intergenic 35.0%
CACCATTCCTTGAAAAATAC+AGG + chr4_4:79305182-79305201 None:intergenic 35.0%
! TGGCAACTAGTTTAAGAGTT+TGG - chr4_4:79305263-79305282 Msa0706350:intron 35.0%
! TGGAAGGTGTATAACTTCAT+AGG - chr4_4:79305283-79305302 Msa0706350:intron 35.0%
AAGGTGTATAACTTCATAGG+CGG - chr4_4:79305286-79305305 Msa0706350:intron 35.0%
GGGACCTTAGGATAATTAAT+AGG - chr4_4:79305338-79305357 Msa0706350:CDS 35.0%
TTTAATTCTTGGGCAAAGTG+GGG + chr4_4:79305564-79305583 None:intergenic 35.0%
! TATACAACAAAAGCACATCC+CGG - chr4_4:79305605-79305624 Msa0706350:intron 35.0%
TACAAACGACTTAAAACTCC+AGG + chr4_4:79305634-79305653 None:intergenic 35.0%
ATTGTGGTTGAACCAATTGT+AGG - chr4_4:79305810-79305829 Msa0706350:CDS 35.0%
GTGGTGATTTAAAGGGTAAA+GGG + chr4_4:79306082-79306101 None:intergenic 35.0%
CATCATTCGTGGTGATTTAA+AGG + chr4_4:79306090-79306109 None:intergenic 35.0%
TTAAATCACCACGAATGATG+AGG - chr4_4:79306090-79306109 Msa0706350:intron 35.0%
GGCATTAATAGTTGAATCAG+AGG + chr4_4:79306291-79306310 None:intergenic 35.0%
AAGAGAAGGCAATTGAAAGA+GGG - chr4_4:79306349-79306368 Msa0706350:intron 35.0%
AAATCATGTGTGCTTGAAAG+AGG - chr4_4:79306422-79306441 Msa0706350:intron 35.0%
AATCATGTGTGCTTGAAAGA+GGG - chr4_4:79306423-79306442 Msa0706350:intron 35.0%
! GGATTTTATCAGGAATTAGG+TGG + chr4_4:79306494-79306513 None:intergenic 35.0%
! TGGGGATTTTATCAGGAATT+AGG + chr4_4:79306497-79306516 None:intergenic 35.0%
TAATTCCTGATAAAATCCCC+AGG - chr4_4:79306496-79306515 Msa0706350:intron 35.0%
ACAAGCTCAAACTTCAAATG+AGG - chr4_4:79306602-79306621 Msa0706350:intron 35.0%
TTATGTGTGCATAAGAAAGC+CGG - chr4_4:79306657-79306676 Msa0706350:intron 35.0%
TCTGATGCATGCATGAATTT+CGG - chr4_4:79306834-79306853 Msa0706350:intron 35.0%
CAATACCATGGGAAGATATT+GGG - chr4_4:79307148-79307167 Msa0706350:intron 35.0%
AATACCATGGGAAGATATTG+GGG - chr4_4:79307149-79307168 Msa0706350:intron 35.0%
TCCGACCAGAAGTTATATTA+AGG - chr4_4:79307223-79307242 Msa0706350:intron 35.0%
GAATAGCATTGCTTGTTTCA+TGG + chr4_4:79307274-79307293 None:intergenic 35.0%
!! GCTTTCCATCAAGTTCTAAA+TGG - chr4_4:79307318-79307337 Msa0706350:intron 35.0%
! CAAGTCCATTTAGAACTTGA+TGG + chr4_4:79307326-79307345 None:intergenic 35.0%
!! AAGTTCTAAATGGACTTGCA+CGG - chr4_4:79307328-79307347 Msa0706350:intron 35.0%
AACTACTACAACTGTTACCA+AGG + chr4_4:79307437-79307456 None:intergenic 35.0%
! AGTAGTTTTCTTAGGTGATC+AGG - chr4_4:79307450-79307469 Msa0706350:intron 35.0%
TTTGTGCTGCATACTAGATT+AGG - chr4_4:79307689-79307708 Msa0706350:intron 35.0%
AGATTAGGTAATTTGGGTCA+CGG - chr4_4:79307704-79307723 Msa0706350:intron 35.0%
ATTTCAAGATTAGAATGGGC+AGG - chr4_4:79307765-79307784 Msa0706350:intron 35.0%
GTGAACTATGAAGTTCTCTT+TGG - chr4_4:79307787-79307806 Msa0706350:intron 35.0%
AGAATTGATTGGATTCCAAG+TGG - chr4_4:79307984-79308003 Msa0706350:intron 35.0%
! GCATTTAGTTCAAGAACCAA+TGG + chr4_4:79308013-79308032 None:intergenic 35.0%
CGATTTACATTCAAGAACGT+GGG + chr4_4:79308089-79308108 None:intergenic 35.0%
TCGATTTACATTCAAGAACG+TGG + chr4_4:79308090-79308109 None:intergenic 35.0%
TCTTACAACTAAACCAACCT+TGG - chr4_4:79308112-79308131 Msa0706350:intron 35.0%
TTCTGTGATACCGATAGATT+TGG - chr4_4:79308173-79308192 Msa0706350:intron 35.0%
CTTTCTCTCTTGTATGATCA+TGG + chr4_4:79308248-79308267 None:intergenic 35.0%
!!! ACTATGCCACTTGTTTTTGA+AGG - chr4_4:79308425-79308444 Msa0706350:intron 35.0%
! TAATTGTCAGTATTTAGGGC+TGG - chr4_4:79308507-79308526 Msa0706350:intron 35.0%
ATTTCGAACTACATTCGAGT+TGG + chr4_4:79308545-79308564 None:intergenic 35.0%
! CTTAATTTTCAGCTCAGGTT+CGG + chr4_4:79308615-79308634 None:intergenic 35.0%
! ACGAACTTAATTTTCAGCTC+AGG + chr4_4:79308620-79308639 None:intergenic 35.0%
TGGGTAAAAAAAGGGAGAAA+CGG + chr4_4:79308779-79308798 None:intergenic 35.0%
TTCCTAGATAGACAATGGAA+CGG + chr4_4:79308803-79308822 None:intergenic 35.0%
CCTATTTCCTAGATAGACAA+TGG + chr4_4:79308808-79308827 None:intergenic 35.0%
CCATTGTCTATCTAGGAAAT+AGG - chr4_4:79308805-79308824 Msa0706350:intron 35.0%
!! GTTTTGGTGGAATTGGAAAA+TGG + chr4_4:79308879-79308898 None:intergenic 35.0%
TTCGCATATGAATTTGCCTA+TGG + chr4_4:79308931-79308950 None:intergenic 35.0%
GGGACCATATCATCTTATTA+TGG + chr4_4:79308972-79308991 None:intergenic 35.0%
AGTTGAAGATGCACAATTGA+TGG + chr4_4:79309017-79309036 None:intergenic 35.0%
GCCCTCTTTATTATTGGAAT+AGG - chr4_4:79309056-79309075 Msa0706350:intron 35.0%
AACAAGCTTCACAAATGATG+TGG + chr4_4:79309197-79309216 None:intergenic 35.0%
TGAAGGCTATATGGAAAATG+TGG - chr4_4:79309244-79309263 Msa0706350:intron 35.0%
AAGAGTGAAGAAGAAGATGA+AGG + chr4_4:79310837-79310856 None:intergenic 35.0%
GTGACAGATTTCTTAGGAAT+GGG + chr4_4:79310936-79310955 None:intergenic 35.0%
TGTGACAGATTTCTTAGGAA+TGG + chr4_4:79310937-79310956 None:intergenic 35.0%
GTAGTTGTGACAGATTTCTT+AGG + chr4_4:79310942-79310961 None:intergenic 35.0%
GCTGCAAAAGAAGTAGTAAA+GGG + chr4_4:79311023-79311042 None:intergenic 35.0%
TGCTGCAAAAGAAGTAGTAA+AGG + chr4_4:79311024-79311043 None:intergenic 35.0%
CAACCTACTGAAAGAATTTC+AGG - chr4_4:79311167-79311186 Msa0706350:intron 35.0%
CTACCTGAAATTCTTTCAGT+AGG + chr4_4:79311173-79311192 None:intergenic 35.0%
! TTTATGGTTAGGTGTCATGT+AGG - chr4_4:79311245-79311264 Msa0706350:intron 35.0%
!! TTAGGATCTGCTTTTGATTG+AGG - chr4_4:79311342-79311361 Msa0706350:intron 35.0%
ACGACAACATTAAAAGATGC+CGG + chr4_4:79311714-79311733 None:intergenic 35.0%
!! GAATTACGAAAAGTGTTAGC+AGG - chr4_4:79311941-79311960 Msa0706350:intron 35.0%
CTTAAATGAGTTGCTGACAT+TGG + chr4_4:79312013-79312032 None:intergenic 35.0%
TGAACCTTGCGGTTATAAAT+AGG - chr4_4:79312092-79312111 Msa0706350:intron 35.0%
GAACCTTGCGGTTATAAATA+GGG - chr4_4:79312093-79312112 Msa0706350:intron 35.0%
GCATTTGCTCTGATTTACAA+GGG + chr4_4:79312264-79312283 None:intergenic 35.0%
AGCATTTGCTCTGATTTACA+AGG + chr4_4:79312265-79312284 None:intergenic 35.0%
ACATCAATATAGGGTGGAAA+AGG + chr4_4:79312361-79312380 None:intergenic 35.0%
GATAGAACATCAATATAGGG+TGG + chr4_4:79312367-79312386 None:intergenic 35.0%
TAGACCTAAGCTCTACAAAT+GGG + chr4_4:79312406-79312425 None:intergenic 35.0%
CTGGATCAAAGTTTACATTC+AGG + chr4_4:79312616-79312635 None:intergenic 35.0%
AATGTAAACTTTGATCCAGC+TGG - chr4_4:79312617-79312636 Msa0706350:intron 35.0%
! TTGGTCTTTGGTATGCTTTA+TGG + chr4_4:79312734-79312753 None:intergenic 35.0%
ATACCAAAGACCAAGTACAT+AGG - chr4_4:79312740-79312759 Msa0706350:intron 35.0%
TACCAAAGACCAAGTACATA+GGG - chr4_4:79312741-79312760 Msa0706350:intron 35.0%
CATTATACTCCCTATGTACT+TGG + chr4_4:79312753-79312772 None:intergenic 35.0%
TCTAGGAAAGGACAAATCTT+TGG + chr4_4:79312804-79312823 None:intergenic 35.0%
TGCTCCCATTAATTCAGAAA+TGG + chr4_4:79312877-79312896 None:intergenic 35.0%
CAACAAGAAAGATAGCTATG+AGG - chr4_4:79312916-79312935 Msa0706350:intron 35.0%
CAACACAAAACCTGTAGTAT+AGG - chr4_4:79312953-79312972 Msa0706350:intron 35.0%
TCCCCACAATTACTGAAATT+TGG - chr4_4:79312996-79313015 Msa0706350:intron 35.0%
CCCAAATTTCAGTAATTGTG+GGG + chr4_4:79313000-79313019 None:intergenic 35.0%
CCCCACAATTACTGAAATTT+GGG - chr4_4:79312997-79313016 Msa0706350:intron 35.0%
GCCCAAATTTCAGTAATTGT+GGG + chr4_4:79313001-79313020 None:intergenic 35.0%
AGCCCAAATTTCAGTAATTG+TGG + chr4_4:79313002-79313021 None:intergenic 35.0%
TGAGCGTTAGGATTATTGTA+AGG + chr4_4:79313063-79313082 None:intergenic 35.0%
ATGGCATGCTTTAATCAAAG+CGG + chr4_4:79313092-79313111 None:intergenic 35.0%
AGCAGTGCTAAAAAATGAGA+TGG + chr4_4:79313111-79313130 None:intergenic 35.0%
CGAATCTAACAAAATGTGTG+AGG + chr4_4:79313148-79313167 None:intergenic 35.0%
! GTTGCAAAGTATCAAACAGA+AGG - chr4_4:79313189-79313208 Msa0706350:intron 35.0%
! TGCAAAGTATCAAACAGAAG+GGG - chr4_4:79313191-79313210 Msa0706350:intron 35.0%
!! TGTTTTGTTACAACAGGGAT+TGG - chr4_4:79313398-79313417 Msa0706350:intron 35.0%
ACAAAGGCAAGGAAGTTATT+AGG + chr4_4:79313437-79313456 None:intergenic 35.0%
!! CTCTGAAATGGTTAACAGAA+TGG - chr4_4:79313608-79313627 Msa0706350:intron 35.0%
ATAATATATCCTTCCGCAAG+GGG + chr4_4:79313710-79313729 None:intergenic 35.0%
!!! GCTCGGTAGTTTTAATAGAT+TGG - chr4_4:79313750-79313769 Msa0706350:intron 35.0%
GGAATTCCTAAGGATATGTT+TGG - chr4_4:79313783-79313802 Msa0706350:intron 35.0%
TGATGTATTGGAAGATGATC+CGG - chr4_4:79314039-79314058 Msa0706350:intron 35.0%
ATCAGCTTCTTCAGGATTAA+GGG + chr4_4:79314206-79314225 None:intergenic 35.0%
AATCAGCTTCTTCAGGATTA+AGG + chr4_4:79314207-79314226 None:intergenic 35.0%
TTAATCCTGAAGAAGCTGAT+TGG - chr4_4:79314206-79314225 Msa0706350:intron 35.0%
TAAAACCAATCAGCTTCTTC+AGG + chr4_4:79314214-79314233 None:intergenic 35.0%
AGGAACCACAAAGAAATGAT+CGG + chr4_4:79314368-79314387 None:intergenic 35.0%
TCTAGACTCATACTTGGTAA+TGG + chr4_4:79314411-79314430 None:intergenic 35.0%
ATATGGTTTATGTGCAGCAT+TGG + chr4_4:79314488-79314507 None:intergenic 35.0%
AAGAGAAGGCAATTGAAAGA+GGG - chr4_4:79306349-79306368 Msa0706350:intron 35.0%
CTACCTTGGTTCAAACATTT+GGG - chr4_4:79306394-79306413 Msa0706350:intron 35.0%
AATCATGTGTGCTTGAAAGA+TGG - chr4_4:79306423-79306442 Msa0706350:intron 35.0%
AGTACACAAAAATTGACCTG+GGG + chr4_4:79314709-79314728 None:intergenic 35.0%
GAAGTACACAAAAATTGACC+TGG + chr4_4:79314711-79314730 None:intergenic 35.0%
! TCAATTTTTGTGTACTTCCG+AGG - chr4_4:79314713-79314732 Msa0706350:intron 35.0%
CAACATCATAAAACAGTCCT+CGG + chr4_4:79306539-79306558 None:intergenic 35.0%
TTGCATAATAACCACCTTCA+GGG + chr4_4:79314763-79314782 None:intergenic 35.0%
! TGCAAGGTAGGTCTTTTTAT+CGG - chr4_4:79314778-79314797 Msa0706350:intron 35.0%
! GTGATTTGGAACTTTAACAG+AGG - chr4_4:79315147-79315166 Msa0706350:intron 35.0%
TCCACTATTTGACATTTCGA+CGG - chr4_4:79315206-79315225 Msa0706350:intron 35.0%
ATGTCCTCGTAATATGTTGT+TGG + chr4_4:79315237-79315256 None:intergenic 35.0%
TCCTTAGTATAACTTCTGGT+GGG + chr4_4:79315464-79315483 None:intergenic 35.0%
TTCCTTAGTATAACTTCTGG+TGG + chr4_4:79315465-79315484 None:intergenic 35.0%
ACATTGCTTGCTTCATAGAA+GGG + chr4_4:79315506-79315525 None:intergenic 35.0%
AACATTGCTTGCTTCATAGA+AGG + chr4_4:79315507-79315526 None:intergenic 35.0%
! TCCATTTAGAACTTGATGGA+AGG + chr4_4:79307322-79307341 None:intergenic 35.0%
! CAAGTCCATTTAGAACTTGA+TGG + chr4_4:79307326-79307345 None:intergenic 35.0%
!! AAGTTCTAAATGGACTTGCA+CGG - chr4_4:79307328-79307347 Msa0706350:intron 35.0%
! AGGAGTGTATTCTTGAAACA+AGG - chr4_4:79315603-79315622 Msa0706350:intron 35.0%
GGAGTGTATTCTTGAAACAA+GGG - chr4_4:79315604-79315623 Msa0706350:intron 35.0%
GAGTGTATTCTTGAAACAAG+GGG - chr4_4:79315605-79315624 Msa0706350:intron 35.0%
AAAACTGCTACCAAGGTTTA+AGG + chr4_4:79315668-79315687 None:intergenic 35.0%
TAAAGAATCATAATCGCCTC+AGG + chr4_4:79315697-79315716 None:intergenic 35.0%
!!! ACTTATTTTGCTGCCTTAGT+AGG - chr4_4:79315878-79315897 Msa0706350:intron 35.0%
GATATGCTTGAAGTCTCAAT+TGG + chr4_4:79316040-79316059 None:intergenic 35.0%
! ATATTTTGTGTCTGTGTGTG+TGG - chr4_4:79316114-79316133 Msa0706350:five_prime_UTR 35.0%
!! TTAGGAAGAAGTGTCAAATC+TGG - chr4_4:79316149-79316168 Msa0706350:five_prime_UTR 35.0%
TTGGATTCAAGCTTGTCTTT+AGG - chr4_4:79316222-79316241 Msa0706350:five_prime_UTR 35.0%
!! TTCTAGTTTATTCTCCAGGT+AGG - chr4_4:79316361-79316380 Msa0706350:five_prime_UTR 35.0%
! TCTAGTTTATTCTCCAGGTA+GGG - chr4_4:79316362-79316381 Msa0706350:five_prime_UTR 35.0%
!! AGGGGTATTGTAATTGTGTG+GGG + chr4_4:79303702-79303721 None:intergenic 40.0%
!! GAGGGGTATTGTAATTGTGT+GGG + chr4_4:79303703-79303722 None:intergenic 40.0%
!! AGAGGGGTATTGTAATTGTG+TGG + chr4_4:79303704-79303723 None:intergenic 40.0%
!!! GGTGAATTTTGCTGGTTTAG+AGG + chr4_4:79303722-79303741 None:intergenic 40.0%
! TTGACGAAGGTGAATTTTGC+TGG + chr4_4:79303730-79303749 None:intergenic 40.0%
GAGAGTAGCGAAGTTGAAAA+TGG + chr4_4:79303782-79303801 None:intergenic 40.0%
TGGAATTAGCTGGAAGGAAA+GGG + chr4_4:79303867-79303886 None:intergenic 40.0%
ATGGAATTAGCTGGAAGGAA+AGG + chr4_4:79303868-79303887 None:intergenic 40.0%
AGGGAAAGTAGTTGTGTTGT+GGG + chr4_4:79303915-79303934 None:intergenic 40.0%
AAGGGAAAGTAGTTGTGTTG+TGG + chr4_4:79303916-79303935 None:intergenic 40.0%
!! AGAAGGTTAAGGTGTCGTAA+GGG + chr4_4:79303934-79303953 None:intergenic 40.0%
!! AAGAAGGTTAAGGTGTCGTA+AGG + chr4_4:79303935-79303954 None:intergenic 40.0%
TCTCTCTTCAATTGATGCTG+TGG - chr4_4:79304082-79304101 Msa0706350:three_prime_UTR 40.0%
CAGCCTACTGAAAGAATTTC+AGG - chr4_4:79304119-79304138 Msa0706350:three_prime_UTR 40.0%
! TTAAGATCTGCTCTGGATTG+AGG - chr4_4:79304335-79304354 Msa0706350:three_prime_UTR 40.0%
AGTATCAAGGGAAACACATG+AGG + chr4_4:79304523-79304542 None:intergenic 40.0%
! GAGCATAATGCAGAGTATCA+AGG + chr4_4:79304536-79304555 None:intergenic 40.0%
GATGCATATTGACAGCCTAA+CGG + chr4_4:79304558-79304577 None:intergenic 40.0%
AAAAAATCCCAACACGCTGT+CGG - chr4_4:79304613-79304632 Msa0706350:CDS 40.0%
CGTGTCTGTACTTCAAATGT+TGG - chr4_4:79305236-79305255 Msa0706350:intron 40.0%
GTACTTCAAATGTTGGCAAG+TGG - chr4_4:79305243-79305262 Msa0706350:intron 40.0%
TTAATTCTTGGGCAAAGTGG+GGG + chr4_4:79305563-79305582 None:intergenic 40.0%
! ATACAACAAAAGCACATCCC+GGG - chr4_4:79305606-79305625 Msa0706350:intron 40.0%
CGATGTATTGGAAGATGATC+CGG - chr4_4:79305842-79305861 Msa0706350:CDS 40.0%
AAAACCTTCAACCTTCCAAC+CGG + chr4_4:79305864-79305883 None:intergenic 40.0%
GATCTCAGCAGCAAACATAT+GGG + chr4_4:79305949-79305968 None:intergenic 40.0%
AGATCTCAGCAGCAAACATA+TGG + chr4_4:79305950-79305969 None:intergenic 40.0%
CTGCTGAGATCTTTATGCAT+CGG - chr4_4:79305958-79305977 Msa0706350:CDS 40.0%
AAAACCAATCAGCCTCTTCA+GGG + chr4_4:79306016-79306035 None:intergenic 40.0%
TAAAACCAATCAGCCTCTTC+AGG + chr4_4:79306017-79306036 None:intergenic 40.0%
GTGATTTAAAGGGTAAAGGG+AGG + chr4_4:79306079-79306098 None:intergenic 40.0%
CGTGGTGATTTAAAGGGTAA+AGG + chr4_4:79306083-79306102 None:intergenic 40.0%
TTTCTTCAAACTGGCCCTAT+TGG - chr4_4:79306129-79306148 Msa0706350:intron 40.0%
CATGAGGAACCACAAAGAAA+TGG + chr4_4:79306175-79306194 None:intergenic 40.0%
TTTGTGGTTCCTCATGACTT+TGG - chr4_4:79306179-79306198 Msa0706350:intron 40.0%
TTGTGGTTCCTCATGACTTT+GGG - chr4_4:79306180-79306199 Msa0706350:intron 40.0%
TCAACTATTAATGCCTCACG+TGG - chr4_4:79306296-79306315 Msa0706350:intron 40.0%
CAACTATTAATGCCTCACGT+GGG - chr4_4:79306297-79306316 Msa0706350:intron 40.0%
GAAGAGAAGGCAATTGAAAG+AGG - chr4_4:79306348-79306367 Msa0706350:intron 40.0%
GCTACCTTGGTTCAAACATT+TGG - chr4_4:79306393-79306412 Msa0706350:intron 40.0%
CTGACCAAATGTTTGAACCA+AGG + chr4_4:79306400-79306419 None:intergenic 40.0%
!! ATTTTCTGTGGTGGAGCATA+TGG + chr4_4:79306465-79306484 None:intergenic 40.0%
! ATAGACCTGGGGATTTTATC+AGG + chr4_4:79306504-79306523 None:intergenic 40.0%
! CGAGGACTGTTTTATGATGT+TGG - chr4_4:79306537-79306556 Msa0706350:intron 40.0%
TTGCATAGTATCCACCTTCA+GGG + chr4_4:79306569-79306588 None:intergenic 40.0%
ACTTCAAATGAGGCTTGAGT+AGG - chr4_4:79306612-79306631 Msa0706350:intron 40.0%
! CTCATCCTTCTACTCTGAAA+AGG - chr4_4:79306680-79306699 Msa0706350:intron 40.0%
AGCAGTATGGGAGAACTTTA+AGG - chr4_4:79306942-79306961 Msa0706350:intron 40.0%
GCACCCAACAACATATTATG+AGG - chr4_4:79306993-79307012 Msa0706350:intron 40.0%
TTGGTTGAAGCTGTGGTATT+TGG - chr4_4:79307075-79307094 Msa0706350:intron 40.0%
GCAATACCATGGGAAGATAT+TGG - chr4_4:79307147-79307166 Msa0706350:intron 40.0%
GTGAGTATGGTATCCAACTT+GGG + chr4_4:79307198-79307217 None:intergenic 40.0%
TGTGAGTATGGTATCCAACT+TGG + chr4_4:79307199-79307218 None:intergenic 40.0%
GCATTGCTTGTTTCATGGAA+GGG + chr4_4:79307269-79307288 None:intergenic 40.0%
AGCATTGCTTGTTTCATGGA+AGG + chr4_4:79307270-79307289 None:intergenic 40.0%
AAGAATACACTCCTGTCATG+CGG + chr4_4:79307360-79307379 None:intergenic 40.0%
! AGGAGTGTATTCTTGAAACC+AGG - chr4_4:79307366-79307385 Msa0706350:intron 40.0%
GGAGTGTATTCTTGAAACCA+GGG - chr4_4:79307367-79307386 Msa0706350:intron 40.0%
GAGTGTATTCTTGAAACCAG+GGG - chr4_4:79307368-79307387 Msa0706350:intron 40.0%
AAAAGCTTGAATTGGACTGC+TGG - chr4_4:79307393-79307412 Msa0706350:intron 40.0%
TGCAGCACAAAAAAGAGAAC+AGG + chr4_4:79307680-79307699 None:intergenic 40.0%
TACCAGTGACCTTTGTAACT+TGG - chr4_4:79307810-79307829 Msa0706350:intron 40.0%
AACCAAGTTACAAAGGTCAC+TGG + chr4_4:79307815-79307834 None:intergenic 40.0%
CACATGGAACCAAGTTACAA+AGG + chr4_4:79307822-79307841 None:intergenic 40.0%
GAAGCACAGATGATAAGATC+TGG + chr4_4:79307954-79307973 None:intergenic 40.0%
AAGAACCAATGGTAACCACT+TGG + chr4_4:79308002-79308021 None:intergenic 40.0%
!! GAACTACATTCGAGTTGGTT+CGG + chr4_4:79308540-79308559 None:intergenic 40.0%
GACAATTGATCCGTTGAACT+TGG - chr4_4:79308572-79308591 Msa0706350:intron 40.0%
GGTTCATGAACCAAGTTCAA+CGG + chr4_4:79308585-79308604 None:intergenic 40.0%
GGAACGGATGGGTAAAAAAA+GGG + chr4_4:79308787-79308806 None:intergenic 40.0%
TGGAACGGATGGGTAAAAAA+AGG + chr4_4:79308788-79308807 None:intergenic 40.0%
AGATAGACAATGGAACGGAT+GGG + chr4_4:79308798-79308817 None:intergenic 40.0%
TAGATAGACAATGGAACGGA+TGG + chr4_4:79308799-79308818 None:intergenic 40.0%
ATCCGTTCCATTGTCTATCT+AGG - chr4_4:79308798-79308817 Msa0706350:intron 40.0%
! TGTTTTCTCTTCTTCTCCGA+CGG - chr4_4:79308905-79308924 Msa0706350:CDS 40.0%
AATTCATATGCGAAGCCCTT+TGG - chr4_4:79308937-79308956 Msa0706350:CDS 40.0%
GGTCCCTTAGTTGTTTGTAT+AGG - chr4_4:79308986-79309005 Msa0706350:exon 40.0%
!! TGAAGCTTGTTGATGCCTAA+AGG - chr4_4:79309206-79309225 Msa0706350:intron 40.0%
! ATTTGGTTCAGCTCGAAACT+CGG + chr4_4:79309655-79309674 None:intergenic 40.0%
! CACAATAAAAGTGGAGGTGT+CGG - chr4_4:79309879-79309898 Msa0706350:intron 40.0%
! AGGTGGTGGTAATGTAAAAC+TGG + chr4_4:79310817-79310836 None:intergenic 40.0%
AGTGAAGAAGAAGATGAAGG+TGG + chr4_4:79310834-79310853 None:intergenic 40.0%
GGTCAAAGAAGAAGGTTAAG+AGG + chr4_4:79310977-79310996 None:intergenic 40.0%
! CAGTATTGAACTAGAAGGCA+TGG + chr4_4:79311480-79311499 None:intergenic 40.0%
TCCTTAGATTAGGTCCAATC+AGG - chr4_4:79311552-79311571 Msa0706350:intron 40.0%
CCTTAGATTAGGTCCAATCA+GGG - chr4_4:79311553-79311572 Msa0706350:intron 40.0%
ATGGAGCTGGACATATATGA+TGG - chr4_4:79311576-79311595 Msa0706350:intron 40.0%
TAAGTTTGGCATTGTTGCAG+TGG + chr4_4:79311975-79311994 None:intergenic 40.0%
GCAAGCAAAATTGAACCTTG+CGG - chr4_4:79312081-79312100 Msa0706350:intron 40.0%
TGCTCATTGGAAATCAAGCA+CGG + chr4_4:79312119-79312138 None:intergenic 40.0%
TATAGGGTGGAAAAGGAAAG+AGG + chr4_4:79312354-79312373 None:intergenic 40.0%
! CTCTACAAATGGGCTTAACT+GGG + chr4_4:79312396-79312415 None:intergenic 40.0%
TAAGCCCATTTGTAGAGCTT+AGG - chr4_4:79312399-79312418 Msa0706350:intron 40.0%
CTAGACCTAAGCTCTACAAA+TGG + chr4_4:79312407-79312426 None:intergenic 40.0%
AAGACAACGCTGTTCTTCAA+GGG + chr4_4:79312454-79312473 None:intergenic 40.0%
GGGAAGGATACATTTCTACT+CGG + chr4_4:79312503-79312522 None:intergenic 40.0%
TCGGGAAATAGTTCAACAAG+AGG + chr4_4:79312555-79312574 None:intergenic 40.0%
TGACTTCAGATAGCAACACT+CGG + chr4_4:79312574-79312593 None:intergenic 40.0%
! GTTGCTATCTGAAGTCATCA+AGG - chr4_4:79312577-79312596 Msa0706350:intron 40.0%
CTTTGATCCAGCTGGAATTA+TGG - chr4_4:79312625-79312644 Msa0706350:intron 40.0%
TCCAGCTGGAATTATGGAAT+CGG - chr4_4:79312631-79312650 Msa0706350:intron 40.0%
!! ACAAATTTTAAGGGTCCTCG+TGG + chr4_4:79312676-79312695 None:intergenic 40.0%
! GCTTTATGGCTTGTAAAGCA+TGG + chr4_4:79312720-79312739 None:intergenic 40.0%
!! ACTACAGGTTTTGTGTTGCA+GGG + chr4_4:79312951-79312970 None:intergenic 40.0%
!! TACTACAGGTTTTGTGTTGC+AGG + chr4_4:79312952-79312971 None:intergenic 40.0%
TACTGAAATTTGGGCTCCAA+TGG - chr4_4:79313006-79313025 Msa0706350:intron 40.0%
AACAATGTCAGATCTGCCAT+TGG + chr4_4:79313025-79313044 None:intergenic 40.0%
AATGGCAGATCTGACATTGT+TGG - chr4_4:79313024-79313043 Msa0706350:intron 40.0%
AAGCGGAAAATATGAGCGTT+AGG + chr4_4:79313075-79313094 None:intergenic 40.0%
ATGTGTGAGGAAGAATCTAC+TGG + chr4_4:79313135-79313154 None:intergenic 40.0%
TGATACTTTGCAACGCTACA+GGG + chr4_4:79313183-79313202 None:intergenic 40.0%
TTGATACTTTGCAACGCTAC+AGG + chr4_4:79313184-79313203 None:intergenic 40.0%
TGAACTTTAGTAGACACCGA+GGG - chr4_4:79313288-79313307 Msa0706350:intron 40.0%
TTTGTTCTTAGTGTTGCCCT+CGG + chr4_4:79313307-79313326 None:intergenic 40.0%
AGGGCAACACTAAGAACAAA+AGG - chr4_4:79313307-79313326 Msa0706350:intron 40.0%
GTTAATTCTGGTCCAACATC+AGG + chr4_4:79313358-79313377 None:intergenic 40.0%
TGGTCAGATAAACAAAGGCA+AGG + chr4_4:79313448-79313467 None:intergenic 40.0%
CAGCTTGGTCAGATAAACAA+AGG + chr4_4:79313453-79313472 None:intergenic 40.0%
TTCAGTGTCTTGCCATTATC+TGG - chr4_4:79313495-79313514 Msa0706350:intron 40.0%
TCAGTGTCTTGCCATTATCT+GGG - chr4_4:79313496-79313515 Msa0706350:intron 40.0%
! CAGGCTTTTCGATGTTTTGT+GGG + chr4_4:79313526-79313545 None:intergenic 40.0%
! TCAGGCTTTTCGATGTTTTG+TGG + chr4_4:79313527-79313546 None:intergenic 40.0%
! GCTTAACATGCTCTCTGAAA+TGG - chr4_4:79313596-79313615 Msa0706350:intron 40.0%
TAATATATCCTTCCGCAAGG+GGG + chr4_4:79313709-79313728 None:intergenic 40.0%
TAATCTTGTGTCTGTAGGCT+CGG - chr4_4:79313733-79313752 Msa0706350:intron 40.0%
CTCAAAATTCCAAGTGACCA+AGG + chr4_4:79313831-79313850 None:intergenic 40.0%
! CTTGGTCACTTGGAATTTTG+AGG - chr4_4:79313829-79313848 Msa0706350:intron 40.0%
!! TCTGTTTCTGGAGATACAGT+AGG - chr4_4:79313903-79313922 Msa0706350:intron 40.0%
!! CTGTTTCTGGAGATACAGTA+GGG - chr4_4:79313904-79313923 Msa0706350:intron 40.0%
GAACTAATTGTAGGTAGTGC+TGG - chr4_4:79314016-79314035 Msa0706350:intron 40.0%
AAAACCTTCAACCTTCCAAC+CGG + chr4_4:79305864-79305883 None:intergenic 40.0%
!! ACATATGGGTTAGGCATCTT+GGG + chr4_4:79314132-79314151 None:intergenic 40.0%
!! AACATATGGGTTAGGCATCT+TGG + chr4_4:79314133-79314152 None:intergenic 40.0%
GATCTCAGCAGCAAACATAT+GGG + chr4_4:79305949-79305968 None:intergenic 40.0%
AGATCTCAGCAGCAAACATA+TGG + chr4_4:79305950-79305969 None:intergenic 40.0%
CTTCTTCAGGATTAAGGGTT+CGG + chr4_4:79314201-79314220 None:intergenic 40.0%
ATCATTCGAGGCGACTTAAA+GGG + chr4_4:79314286-79314305 None:intergenic 40.0%
TTTGTGGTTCCTCATGACTT+TGG - chr4_4:79306179-79306198 Msa0706350:intron 40.0%
TTGTGGTTCCTCATGACTTT+GGG - chr4_4:79306180-79306199 Msa0706350:intron 40.0%
GAAGAGAAGGCAATTGAAAG+AGG - chr4_4:79306348-79306367 Msa0706350:intron 40.0%
GCTACCTTGGTTCAAACATT+TGG - chr4_4:79306393-79306412 Msa0706350:intron 40.0%
!! ATTTTCTGTGGTGGAGCATA+TGG + chr4_4:79306465-79306484 None:intergenic 40.0%
! AAGTGGGTATGCATTTTCTG+TGG + chr4_4:79314671-79314690 None:intergenic 40.0%
! GGTCTTATCAGGAATCAAGT+GGG + chr4_4:79314687-79314706 None:intergenic 40.0%
GTACACAAAAATTGACCTGG+GGG + chr4_4:79314708-79314727 None:intergenic 40.0%
! CGAGGACTGTTTTATGATGT+TGG - chr4_4:79306537-79306556 Msa0706350:intron 40.0%
CTTGCATAATAACCACCTTC+AGG + chr4_4:79314764-79314783 None:intergenic 40.0%
CTGAAGGTGGTTATTATGCA+AGG - chr4_4:79314762-79314781 Msa0706350:intron 40.0%
AGGTGGTTATTATGCAAGGT+AGG - chr4_4:79314766-79314785 Msa0706350:intron 40.0%
ATCGGTCCAAACTTCAAATG+AGG - chr4_4:79314796-79314815 Msa0706350:intron 40.0%
TCGGTCCAAACTTCAAATGA+GGG - chr4_4:79314797-79314816 Msa0706350:intron 40.0%
! GCATGCATTCTTTTACCGAA+AGG - chr4_4:79314876-79314895 Msa0706350:intron 40.0%
! TCTTTTACCGAAAGGCGAAA+AGG - chr4_4:79314884-79314903 Msa0706350:intron 40.0%
CAAGTAATGCATACACGTCT+TGG - chr4_4:79315054-79315073 Msa0706350:intron 40.0%
TGGTCAATCTGTCTGTGATT+TGG - chr4_4:79315133-79315152 Msa0706350:intron 40.0%
TCCGTCGAAATGTCAAATAG+TGG + chr4_4:79315210-79315229 None:intergenic 40.0%
GCATCCAACAACATATTACG+AGG - chr4_4:79315230-79315249 Msa0706350:intron 40.0%
AAGTGGGCATAGACAAAACA+CGG + chr4_4:79315268-79315287 None:intergenic 40.0%
TTGGTTGAAGCTGTGGTATT+TGG - chr4_4:79307075-79307094 Msa0706350:intron 40.0%
GTGAGTATGGTATCCAACTT+GGG + chr4_4:79307198-79307217 None:intergenic 40.0%
TGTGAGTATGGTATCCAACT+TGG + chr4_4:79307199-79307218 None:intergenic 40.0%
TCCCACCAGAAGTTATACTA+AGG - chr4_4:79315460-79315479 Msa0706350:intron 40.0%
!! GCCTTCCATCAAGTTCTAAA+TGG - chr4_4:79315555-79315574 Msa0706350:intron 40.0%
AAGAATACACTCCTGTCATG+TGG + chr4_4:79307360-79307379 None:intergenic 40.0%
GACTGTTAAAACTGCTACCA+AGG + chr4_4:79315675-79315694 None:intergenic 40.0%
!! TAGCAGTTTTAACAGTCCTG+AGG - chr4_4:79315678-79315697 Msa0706350:intron 40.0%
ATCCTCCCCAAAATGTTCAT+AGG - chr4_4:79315730-79315749 Msa0706350:intron 40.0%
TCCTCCCCAAAATGTTCATA+GGG - chr4_4:79315731-79315750 Msa0706350:intron 40.0%
GAAAACAGACACTCCTACTA+AGG + chr4_4:79315894-79315913 None:intergenic 40.0%
! GTCTGTTTTCTCTTGTGTCA+CGG - chr4_4:79315904-79315923 Msa0706350:intron 40.0%
! TGTGTGTGTGGATTTAGGTT+AGG - chr4_4:79316126-79316145 Msa0706350:five_prime_UTR 40.0%
! GTGTGGATTTAGGTTAGGTT+AGG - chr4_4:79316131-79316150 Msa0706350:five_prime_UTR 40.0%
!! TCTGGCTTGCTTAGAAGAAA+CGG - chr4_4:79316167-79316186 Msa0706350:five_prime_UTR 40.0%
AGAGACAGGTTAGAAGAGTG+AGG + chr4_4:79303820-79303839 None:intergenic 45.0%
! TTCTGAGAAGCAACAGAGAC+AGG + chr4_4:79303834-79303853 None:intergenic 45.0%
AGCTGGAAGGAAAGGGAAAT+GGG + chr4_4:79303860-79303879 None:intergenic 45.0%
TAGCTGGAAGGAAAGGGAAA+TGG + chr4_4:79303861-79303880 None:intergenic 45.0%
GGGGTTTCAATGGAATTAGC+TGG + chr4_4:79303877-79303896 None:intergenic 45.0%
! GCTCTGGATTGAGGTTGATT+AGG - chr4_4:79304344-79304363 Msa0706350:three_prime_UTR 45.0%
ACTCTGCATTATGCTCCGTT+AGG - chr4_4:79304540-79304559 Msa0706350:CDS 45.0%
TGTTGAAACTCTCACCCATC+CGG - chr4_4:79304683-79304702 Msa0706350:CDS 45.0%
TAACCGTGACATAACCGGAT+GGG + chr4_4:79304700-79304719 None:intergenic 45.0%
TGACGTAACCGTGACATAAC+CGG + chr4_4:79304705-79304724 None:intergenic 45.0%
TCCAAGCAAATTGGGACCTT+AGG - chr4_4:79305326-79305345 Msa0706350:CDS 45.0%
! TCCTAAGGTCCCAATTTGCT+TGG + chr4_4:79305330-79305349 None:intergenic 45.0%
! TTACGTGAGAGGTACACCAT+TGG + chr4_4:79305414-79305433 None:intergenic 45.0%
TAGGGATTCTTGCTGAATCC+CGG - chr4_4:79305473-79305492 Msa0706350:CDS 45.0%
! TACAACAAAAGCACATCCCG+GGG - chr4_4:79305607-79305626 Msa0706350:intron 45.0%
GAACCAATTGTAGGTAGTGC+TGG - chr4_4:79305819-79305838 Msa0706350:CDS 45.0%
GTATTGGAAGATGATCCGGT+TGG - chr4_4:79305846-79305865 Msa0706350:CDS 45.0%
! ACATATGGGTGAGGCATCTT+GGG + chr4_4:79305935-79305954 None:intergenic 45.0%
! AACATATGGGTGAGGCATCT+TGG + chr4_4:79305936-79305955 None:intergenic 45.0%
ATCAGCCTCTTCAGGGTTAA+GGG + chr4_4:79306009-79306028 None:intergenic 45.0%
AATCAGCCTCTTCAGGGTTA+AGG + chr4_4:79306010-79306029 None:intergenic 45.0%
TTAACCCTGAAGAGGCTGAT+TGG - chr4_4:79306009-79306028 Msa0706350:CDS 45.0%
AAGTCACAGGTTGTGTAGAC+AGG + chr4_4:79306044-79306063 None:intergenic 45.0%
ACCTGTGACTTGACACCAAA+TGG - chr4_4:79306053-79306072 Msa0706350:intron 45.0%
TGTGGTTCCTCATGACTTTG+GGG - chr4_4:79306181-79306200 Msa0706350:intron 45.0%
AAACATGCCCCAAAGTCATG+AGG + chr4_4:79306191-79306210 None:intergenic 45.0%
TATGTTACATGACCCACGTG+AGG + chr4_4:79306312-79306331 None:intergenic 45.0%
! TGGGAATGCATTTTCTGTGG+TGG + chr4_4:79306474-79306493 None:intergenic 45.0%
! AGGTGGGAATGCATTTTCTG+TGG + chr4_4:79306477-79306496 None:intergenic 45.0%
GATGTTGGAAATGACCCTGA+AGG - chr4_4:79306552-79306571 Msa0706350:intron 45.0%
CTTGCATAGTATCCACCTTC+AGG + chr4_4:79306570-79306589 None:intergenic 45.0%
CTGAAGGTGGATACTATGCA+AGG - chr4_4:79306568-79306587 Msa0706350:intron 45.0%
TTCAGAGTAGAAGGATGAGC+CGG + chr4_4:79306679-79306698 None:intergenic 45.0%
! TGTCGCCTTTTCAGAGTAGA+AGG + chr4_4:79306688-79306707 None:intergenic 45.0%
CACAGCCAGTTTGAATAGTC+AGG + chr4_4:79306894-79306913 None:intergenic 45.0%
CCACAGCTTCAACCAATCTT+GGG + chr4_4:79307071-79307090 None:intergenic 45.0%
ACCACAGCTTCAACCAATCT+TGG + chr4_4:79307072-79307091 None:intergenic 45.0%
ATCTTCCCATGGTATTGCGT+CGG + chr4_4:79307145-79307164 None:intergenic 45.0%
AACACCCCAATATCTTCCCA+TGG + chr4_4:79307156-79307175 None:intergenic 45.0%
TGAGCAAGATGTTCCCAAGT+TGG - chr4_4:79307182-79307201 Msa0706350:intron 45.0%
! CAATTCAAGCTTTTCTCCCC+TGG + chr4_4:79307387-79307406 None:intergenic 45.0%
CAGGGGAGAAAAGCTTGAAT+TGG - chr4_4:79307385-79307404 Msa0706350:intron 45.0%
CAAGGTTTAAGTCACCGACA+GGG + chr4_4:79307419-79307438 None:intergenic 45.0%
TGCTTTCAAAACGTGTTCCC+TGG - chr4_4:79307641-79307660 Msa0706350:intron 45.0%
GGATTCCAAGTGGTTACCAT+TGG - chr4_4:79307994-79308013 Msa0706350:intron 45.0%
ATGAATTTGCCTATGGCCGT+CGG + chr4_4:79308924-79308943 None:intergenic 45.0%
TACGTTGGATGCAATGACTG+AGG + chr4_4:79309913-79309932 None:intergenic 45.0%
! GTCGATTCAACTAGGACTTG+TGG - chr4_4:79309949-79309968 Msa0706350:intron 45.0%
! GACAGCAGTTGGTGCAAAAA+TGG - chr4_4:79310727-79310746 Msa0706350:intron 45.0%
GAAGAAGAAGATGAAGGTGG+TGG + chr4_4:79310831-79310850 None:intergenic 45.0%
TTGATGCTGTTGAGCTTCGT+AGG - chr4_4:79311141-79311160 Msa0706350:intron 45.0%
CCCTGATTGGACCTAATCTA+AGG + chr4_4:79311556-79311575 None:intergenic 45.0%
AGATTAGGTCCAATCAGGGA+TGG - chr4_4:79311557-79311576 Msa0706350:intron 45.0%
GAGCTGGACATATATGATGG+CGG - chr4_4:79311579-79311598 Msa0706350:intron 45.0%
AGCTGGACATATATGATGGC+GGG - chr4_4:79311580-79311599 Msa0706350:intron 45.0%
CCGGTAATACAGCAGATTTG+CGG + chr4_4:79311695-79311714 None:intergenic 45.0%
CCGCAAATCTGCTGTATTAC+CGG - chr4_4:79311692-79311711 Msa0706350:intron 45.0%
AGTTAGTAACCACTGGGGTT+GGG + chr4_4:79312313-79312332 None:intergenic 45.0%
TCTGGCAGTTAGTAACCACT+GGG + chr4_4:79312319-79312338 None:intergenic 45.0%
TTCTGGCAGTTAGTAACCAC+TGG + chr4_4:79312320-79312339 None:intergenic 45.0%
! GCTCTACAAATGGGCTTAAC+TGG + chr4_4:79312397-79312416 None:intergenic 45.0%
GTAGAGCTTAGGTCTAGATC+TGG - chr4_4:79312410-79312429 Msa0706350:intron 45.0%
AGACAACGCTGTTCTTCAAG+GGG + chr4_4:79312453-79312472 None:intergenic 45.0%
GAAGACAACGCTGTTCTTCA+AGG + chr4_4:79312455-79312474 None:intergenic 45.0%
GAAGAACAGCGTTGTCTTCA+AGG - chr4_4:79312456-79312475 Msa0706350:intron 45.0%
GACTTCAGATAGCAACACTC+GGG + chr4_4:79312573-79312592 None:intergenic 45.0%
TCCGATTCCATAATTCCAGC+TGG + chr4_4:79312635-79312654 None:intergenic 45.0%
ATACAGAGATAGTGACCACG+AGG - chr4_4:79312658-79312677 Msa0706350:intron 45.0%
! CTCCCTATGTACTTGGTCTT+TGG + chr4_4:79312746-79312765 None:intergenic 45.0%
! TTGTGACAGCTCTCTAGGAA+AGG + chr4_4:79312816-79312835 None:intergenic 45.0%
GCTGTCACAATCGAGTTTCA+AGG - chr4_4:79312826-79312845 Msa0706350:intron 45.0%
GAAAGATAGCTATGAGGGCA+AGG - chr4_4:79312922-79312941 Msa0706350:intron 45.0%
!! CTACAGGTTTTGTGTTGCAG+GGG + chr4_4:79312950-79312969 None:intergenic 45.0%
!! CTCGGTGTCTACTAAAGTTC+AGG + chr4_4:79313289-79313308 None:intergenic 45.0%
CTGAACTTTAGTAGACACCG+AGG - chr4_4:79313287-79313306 Msa0706350:intron 45.0%
CTCGATACAGTTCCTGATGT+TGG - chr4_4:79313343-79313362 Msa0706350:intron 45.0%
!! TGTGTTAGGATACTGGCTCT+GGG + chr4_4:79313686-79313705 None:intergenic 45.0%
!! AGGTAGTGCTGGTGATGTAT+TGG - chr4_4:79314027-79314046 Msa0706350:intron 45.0%
GTATTGGAAGATGATCCGGT+TGG - chr4_4:79305846-79305865 Msa0706350:CDS 45.0%
CAGCAGCAAACATATGGGTT+AGG + chr4_4:79314141-79314160 None:intergenic 45.0%
CTGCTGAGATCTTTATGCAC+CGG - chr4_4:79314155-79314174 Msa0706350:intron 45.0%
CAGCGCTAGATAAGAGAAAC+CGG + chr4_4:79314177-79314196 None:intergenic 45.0%
AGTCACAGGTGGTGTATACA+GGG + chr4_4:79314240-79314259 None:intergenic 45.0%
AAGTCACAGGTGGTGTATAC+AGG + chr4_4:79314241-79314260 None:intergenic 45.0%
!! ATTTGGTGTCAAGTCACAGG+TGG + chr4_4:79306054-79306073 None:intergenic 45.0%
ACCTGTGACTTGACACCAAA+TGG - chr4_4:79306053-79306072 Msa0706350:intron 45.0%
GAGGCGACTTAAAGGGTAAA+GGG + chr4_4:79314279-79314298 None:intergenic 45.0%
CATCATTCGAGGCGACTTAA+AGG + chr4_4:79314287-79314306 None:intergenic 45.0%
ATGGCACTTCTCATCATTCG+AGG + chr4_4:79314298-79314317 None:intergenic 45.0%
CCTTATTGGAACCGAACAGA+GGG - chr4_4:79314340-79314359 Msa0706350:intron 45.0%
TGTGGTTCCTCATGACTTTG+GGG - chr4_4:79306181-79306200 Msa0706350:intron 45.0%
AAACATGCCCCAAAGTCATG+AGG + chr4_4:79306191-79306210 None:intergenic 45.0%
CTGCCCAAATGTTTGAACCA+AGG + chr4_4:79314594-79314613 None:intergenic 45.0%
TGGTTCAAACATTTGGGCAG+AGG - chr4_4:79314594-79314613 Msa0706350:intron 45.0%
! TGGGTATGCATTTTCTGTGG+TGG + chr4_4:79314668-79314687 None:intergenic 45.0%
! GGGTCTTATCAGGAATCAAG+TGG + chr4_4:79314688-79314707 None:intergenic 45.0%
GATGTTGGAAATGACCCTGA+AGG - chr4_4:79306552-79306571 Msa0706350:intron 45.0%
! TCCATTGCCTTTTCGCCTTT+CGG + chr4_4:79314894-79314913 None:intergenic 45.0%
CACAGACAGATTGACCAGTT+AGG + chr4_4:79315130-79315149 None:intergenic 45.0%
! GTGTTTTGTCTATGCCCACT+TGG - chr4_4:79315267-79315286 Msa0706350:intron 45.0%
TTTGTCTATGCCCACTTGGA+TGG - chr4_4:79315271-79315290 Msa0706350:intron 45.0%
TTGTCTATGCCCACTTGGAT+GGG - chr4_4:79315272-79315291 Msa0706350:intron 45.0%
CCACAGCTTCAACCAATCTT+GGG + chr4_4:79307071-79307090 None:intergenic 45.0%
ACCACAGCTTCAACCAATCT+TGG + chr4_4:79307072-79307091 None:intergenic 45.0%
TGCTTGCTTCATAGAAGGGT+TGG + chr4_4:79315502-79315521 None:intergenic 45.0%
AAGGGGAGAAGAGCTTGAAT+TGG - chr4_4:79315622-79315641 Msa0706350:intron 45.0%
AAGAGCTTGAATTGGACTGC+TGG - chr4_4:79315630-79315649 Msa0706350:intron 45.0%
! AAGGTTTAAGGTCGCCAACA+GGG + chr4_4:79315656-79315675 None:intergenic 45.0%
CCTCCCCAAAATGTTCATAG+GGG - chr4_4:79315732-79315751 Msa0706350:intron 45.0%
! CGACCCCTATGAACATTTTG+GGG + chr4_4:79315738-79315757 None:intergenic 45.0%
! CCGACCCCTATGAACATTTT+GGG + chr4_4:79315739-79315758 None:intergenic 45.0%
CCCAAAATGTTCATAGGGGT+CGG - chr4_4:79315736-79315755 Msa0706350:intron 45.0%
! ACCGACCCCTATGAACATTT+TGG + chr4_4:79315740-79315759 None:intergenic 45.0%
!! TCCACAAAAAAAGGGCACCT+CGG + chr4_4:79315765-79315784 None:intergenic 45.0%
TTTCTCTTGTGTCACGGCAT+TGG - chr4_4:79315910-79315929 Msa0706350:intron 45.0%
GTGTCTGTGTGTGTGGATTT+AGG - chr4_4:79316121-79316140 Msa0706350:five_prime_UTR 45.0%
AGTTTATTCTCCAGGTAGGG+TGG - chr4_4:79316365-79316384 Msa0706350:five_prime_UTR 45.0%
!! AAAAGTAAAAAAATTATTAA+TGG + chr4_4:79310089-79310108 None:intergenic 5.0%
!!! ATATGTTATTTAAAATTTAT+TGG - chr4_4:79314431-79314450 Msa0706350:intron 5.0%
TTGATGCTGTGGAGTTGCAC+AGG - chr4_4:79304093-79304112 Msa0706350:three_prime_UTR 50.0%
TCACCCATCCGGTTATGTCA+CGG - chr4_4:79304694-79304713 Msa0706350:CDS 50.0%
GTAACCGTGACATAACCGGA+TGG + chr4_4:79304701-79304720 None:intergenic 50.0%
GTGTACCTCTCACGTAAGTG+CGG - chr4_4:79305417-79305436 Msa0706350:CDS 50.0%
AGGGATTCTTGCTGAATCCC+GGG - chr4_4:79305474-79305493 Msa0706350:CDS 50.0%
ACTTAAAACTCCAGGACCCC+GGG + chr4_4:79305626-79305645 None:intergenic 50.0%
GACTTAAAACTCCAGGACCC+CGG + chr4_4:79305627-79305646 None:intergenic 50.0%
TCGCCAGCACTACCTACAAT+TGG + chr4_4:79305825-79305844 None:intergenic 50.0%
!! AGGTAGTGCTGGCGATGTAT+TGG - chr4_4:79305830-79305849 Msa0706350:CDS 50.0%
TGGAAGATGATCCGGTTGGA+AGG - chr4_4:79305850-79305869 Msa0706350:CDS 50.0%
TGATCCGGTTGGAAGGTTGA+AGG - chr4_4:79305857-79305876 Msa0706350:CDS 50.0%
CAGCAGCAAACATATGGGTG+AGG + chr4_4:79305944-79305963 None:intergenic 50.0%
CCTCTTCAGGGTTAAGGGTT+CGG + chr4_4:79306004-79306023 None:intergenic 50.0%
!! GCCATTTGGTGTCAAGTCAC+AGG + chr4_4:79306057-79306076 None:intergenic 50.0%
AAGGGTAAAGGGAGGCCATT+TGG + chr4_4:79306071-79306090 None:intergenic 50.0%
ATGGCACTCCTCATCATTCG+TGG + chr4_4:79306101-79306120 None:intergenic 50.0%
CCCTCTGTTCGGTTCCAATA+GGG + chr4_4:79306146-79306165 None:intergenic 50.0%
CCCTATTGGAACCGAACAGA+GGG - chr4_4:79306143-79306162 Msa0706350:intron 50.0%
CCTATTGGAACCGAACAGAG+GGG - chr4_4:79306144-79306163 Msa0706350:intron 50.0%
CTATTGGAACCGAACAGAGG+GGG - chr4_4:79306145-79306164 Msa0706350:intron 50.0%
! TTCTGTGGTGGAGCATATGG+AGG + chr4_4:79306462-79306481 None:intergenic 50.0%
GTTGGAAATGACCCTGAAGG+TGG - chr4_4:79306555-79306574 Msa0706350:intron 50.0%
AGGTGCAAGAGCAGCAGTAT+GGG - chr4_4:79306930-79306949 Msa0706350:intron 50.0%
! GTGTTTTGTCCATGCCCACT+TGG - chr4_4:79307030-79307049 Msa0706350:intron 50.0%
TTTGTCCATGCCCACTTGGA+TGG - chr4_4:79307034-79307053 Msa0706350:intron 50.0%
TTGTCCATGCCCACTTGGAT+GGG - chr4_4:79307035-79307054 Msa0706350:intron 50.0%
AACCAATCTTGGGCTCCAAG+GGG + chr4_4:79307061-79307080 None:intergenic 50.0%
CAACCAATCTTGGGCTCCAA+GGG + chr4_4:79307062-79307081 None:intergenic 50.0%
TCAACCAATCTTGGGCTCCA+AGG + chr4_4:79307063-79307082 None:intergenic 50.0%
! CCCAAGATTGGTTGAAGCTG+TGG - chr4_4:79307068-79307087 Msa0706350:intron 50.0%
! CATGGTATTGCGTCGGCAAA+CGG + chr4_4:79307138-79307157 None:intergenic 50.0%
GTTTGCCGACGCAATACCAT+GGG - chr4_4:79307137-79307156 Msa0706350:intron 50.0%
TGGTCGGATCGATGTGAGTA+TGG + chr4_4:79307211-79307230 None:intergenic 50.0%
CCAAGGTTTAAGTCACCGAC+AGG + chr4_4:79307420-79307439 None:intergenic 50.0%
CCTGTCGGTGACTTAAACCT+TGG - chr4_4:79307417-79307436 Msa0706350:intron 50.0%
AACGTGTTCCCTGGTCTAGT+AGG - chr4_4:79307650-79307669 Msa0706350:intron 50.0%
GGTAATTTGGGTCACGGCTT+TGG - chr4_4:79307710-79307729 Msa0706350:intron 50.0%
! ATTTGAGTTCGCGAGCAGCT+CGG + chr4_4:79309588-79309607 None:intergenic 50.0%
! CGGCTCGACTCGATAAGATT+TGG + chr4_4:79309672-79309691 None:intergenic 50.0%
TAACCCCAACAGACAGCAGT+TGG - chr4_4:79310716-79310735 Msa0706350:intron 50.0%
TGCACCAACTGCTGTCTGTT+GGG + chr4_4:79310723-79310742 None:intergenic 50.0%
TTGCACCAACTGCTGTCTGT+TGG + chr4_4:79310724-79310743 None:intergenic 50.0%
! GCTGGACATATATGATGGCG+GGG - chr4_4:79311581-79311600 Msa0706350:intron 50.0%
CCAAACTTACGTCCATCCCT+GGG - chr4_4:79311986-79312005 Msa0706350:intron 50.0%
AGTTGCTGACATTGGACCCA+GGG + chr4_4:79312005-79312024 None:intergenic 50.0%
CGGCCCTATTTATAACCGCA+AGG + chr4_4:79312099-79312118 None:intergenic 50.0%
TGTGCACATTGAGAGGGAGT+AGG + chr4_4:79312158-79312177 None:intergenic 50.0%
TACTCCCTCTCAATGTGCAC+AGG - chr4_4:79312157-79312176 Msa0706350:intron 50.0%
GTGTCCTGTGCACATTGAGA+GGG + chr4_4:79312164-79312183 None:intergenic 50.0%
TGTGTCCTGTGCACATTGAG+AGG + chr4_4:79312165-79312184 None:intergenic 50.0%
CAGTTAGTAACCACTGGGGT+TGG + chr4_4:79312314-79312333 None:intergenic 50.0%
CTGGCAGTTAGTAACCACTG+GGG + chr4_4:79312318-79312337 None:intergenic 50.0%
GAAAAGGAAAGAGGCGGTCA+TGG + chr4_4:79312345-79312364 None:intergenic 50.0%
AGGGTGGAAAAGGAAAGAGG+CGG + chr4_4:79312351-79312370 None:intergenic 50.0%
TTCAAGGGGTGGGTCATGTT+AGG + chr4_4:79312439-79312458 None:intergenic 50.0%
AACGCTGTTCTTCAAGGGGT+GGG + chr4_4:79312449-79312468 None:intergenic 50.0%
CAGCGTTGTCTTCAAGGATG+AGG - chr4_4:79312462-79312481 Msa0706350:intron 50.0%
TCCTTCCCAGCTATGACTAG+AGG - chr4_4:79312515-79312534 Msa0706350:intron 50.0%
CCTTCCCAGCTATGACTAGA+GGG - chr4_4:79312516-79312535 Msa0706350:intron 50.0%
CAGTCCCTCTAGTCATAGCT+GGG + chr4_4:79312523-79312542 None:intergenic 50.0%
TCAGTCCCTCTAGTCATAGC+TGG + chr4_4:79312524-79312543 None:intergenic 50.0%
CTCGATTGTGACAGCTCTCT+AGG + chr4_4:79312821-79312840 None:intergenic 50.0%
CAACGCTACAGGGTTGTTGT+TGG + chr4_4:79313173-79313192 None:intergenic 50.0%
ACTCTCGGCTCATGTGTATG+TGG - chr4_4:79313263-79313282 Msa0706350:intron 50.0%
!! GGCAAGACACTGAAAGCGTT+TGG + chr4_4:79313489-79313508 None:intergenic 50.0%
TTGTGGGTGTGCCCAGATAA+TGG + chr4_4:79313510-79313529 None:intergenic 50.0%
!! GTGTTAGGATACTGGCTCTG+GGG + chr4_4:79313685-79313704 None:intergenic 50.0%
!! GTGTGTTAGGATACTGGCTC+TGG + chr4_4:79313687-79313706 None:intergenic 50.0%
! AAGGGGGTGTGTTAGGATAC+TGG + chr4_4:79313693-79313712 None:intergenic 50.0%
TATCCTAACACACCCCCTTG+CGG - chr4_4:79313694-79313713 Msa0706350:intron 50.0%
TGTGCACATCCTTGGTCACT+TGG - chr4_4:79313819-79313838 Msa0706350:intron 50.0%
TGGAAGATGATCCGGTTGGA+AGG - chr4_4:79305850-79305869 Msa0706350:CDS 50.0%
TGATCCGGTTGGAAGGTTGA+AGG - chr4_4:79305857-79305876 Msa0706350:CDS 50.0%
GTCACAGGTGGTGTATACAG+GGG + chr4_4:79314239-79314258 None:intergenic 50.0%
!! GCCATTTGGTGTCAAGTCAC+AGG + chr4_4:79306057-79306076 None:intergenic 50.0%
AAGGGTAAAGGGAGGCCATT+TGG + chr4_4:79306071-79306090 None:intergenic 50.0%
GCGACTTAAAGGGTAAAGGG+AGG + chr4_4:79314276-79314295 None:intergenic 50.0%
CGAGGCGACTTAAAGGGTAA+AGG + chr4_4:79314280-79314299 None:intergenic 50.0%
! GCCTTATTGGAACCGAACAG+AGG - chr4_4:79314339-79314358 Msa0706350:intron 50.0%
CCCTCTGTTCGGTTCCAATA+AGG + chr4_4:79306146-79306165 None:intergenic 50.0%
! AATGATCGGCTCCCTCTGTT+CGG + chr4_4:79314354-79314373 None:intergenic 50.0%
GGGAGCCGATCATTTCTTTG+TGG - chr4_4:79314360-79314379 Msa0706350:intron 50.0%
TGGTGGAGCATATGGAGGAA+TGG + chr4_4:79306457-79306476 None:intergenic 50.0%
! TTCTGTGGTGGAGCATATGG+AGG + chr4_4:79306462-79306481 None:intergenic 50.0%
TGATTCCTGATAAGACCCCC+AGG - chr4_4:79314690-79314709 Msa0706350:intron 50.0%
! ATTGACCTGGGGGTCTTATC+AGG + chr4_4:79314698-79314717 None:intergenic 50.0%
GTTGGAAATGACCCTGAAGG+TGG - chr4_4:79306555-79306574 Msa0706350:intron 50.0%
ACCGAAAGGCGAAAAGGCAA+TGG - chr4_4:79314890-79314909 Msa0706350:intron 50.0%
! TAACAGAGGTGCAAGAGCAG+CGG - chr4_4:79315161-79315180 Msa0706350:intron 50.0%
AGCGGTGTGGGAGAACTTTA+AGG - chr4_4:79315179-79315198 Msa0706350:intron 50.0%
TCAACCAATCTTGGGCTCCA+GGG + chr4_4:79307063-79307082 None:intergenic 50.0%
TTCAACCAATCTTGGGCTCC+AGG + chr4_4:79307064-79307083 None:intergenic 50.0%
! CCCAAGATTGGTTGAAGCTG+TGG - chr4_4:79307068-79307087 Msa0706350:intron 50.0%
! CACGGTATTGCATCGGCAAA+CGG + chr4_4:79315375-79315394 None:intergenic 50.0%
GTTTGCCGATGCAATACCGT+GGG - chr4_4:79315374-79315393 Msa0706350:intron 50.0%
CTCTTCCCACGGTATTGCAT+CGG + chr4_4:79315382-79315401 None:intergenic 50.0%
GCAATACCGTGGGAAGAGAT+CGG - chr4_4:79315384-79315403 Msa0706350:intron 50.0%
CAATACCGTGGGAAGAGATC+GGG - chr4_4:79315385-79315404 Msa0706350:intron 50.0%
AATACCGTGGGAAGAGATCG+GGG - chr4_4:79315386-79315405 Msa0706350:intron 50.0%
TGAGCAGGATGTTCCCAAGT+TGG - chr4_4:79315419-79315438 Msa0706350:intron 50.0%
TGGTGGGATCGATGTGAGTA+TGG + chr4_4:79315448-79315467 None:intergenic 50.0%
ATCTCCTGATTGTGCGGGTT+GGG + chr4_4:79315535-79315554 None:intergenic 50.0%
! AAGGCATCTCCTGATTGTGC+GGG + chr4_4:79315540-79315559 None:intergenic 50.0%
!! GAAGGCATCTCCTGATTGTG+CGG + chr4_4:79315541-79315560 None:intergenic 50.0%
! CAAGGTTTAAGGTCGCCAAC+AGG + chr4_4:79315657-79315676 None:intergenic 50.0%
CTGTTGGCGACCTTAAACCT+TGG - chr4_4:79315655-79315674 Msa0706350:intron 50.0%
!! CCCCTATGAACATTTTGGGG+AGG + chr4_4:79315735-79315754 None:intergenic 50.0%
!!! ACCGAGGTGCCCTTTTTTTG+TGG - chr4_4:79315761-79315780 Msa0706350:intron 50.0%
AAGCTATCTACCACCCTACC+TGG + chr4_4:79316378-79316397 None:intergenic 50.0%
AGGTAGGGTGGTAGATAGCT+TGG - chr4_4:79316377-79316396 Msa0706350:five_prime_UTR 50.0%
AGACATGCCGACAGCGTGTT+GGG + chr4_4:79304623-79304642 None:intergenic 55.0%
TGCATCCGCACTTACGTGAG+AGG + chr4_4:79305425-79305444 None:intergenic 55.0%
GGGATTCTTGCTGAATCCCG+GGG - chr4_4:79305475-79305494 Msa0706350:CDS 55.0%
CCGAACCCTTAACCCTGAAG+AGG - chr4_4:79306001-79306020 Msa0706350:CDS 55.0%
GCCCTATTGGAACCGAACAG+AGG - chr4_4:79306142-79306161 Msa0706350:intron 55.0%
CCCCTCTGTTCGGTTCCAAT+AGG + chr4_4:79306147-79306166 None:intergenic 55.0%
TAGCACGCTGTAGCAGTGGA+AGG + chr4_4:79306377-79306396 None:intergenic 55.0%
AAGGTAGCACGCTGTAGCAG+TGG + chr4_4:79306381-79306400 None:intergenic 55.0%
ACTGCTACAGCGTGCTACCT+TGG - chr4_4:79306380-79306399 Msa0706350:intron 55.0%
GAGGTGCAAGAGCAGCAGTA+TGG - chr4_4:79306929-79306948 Msa0706350:intron 55.0%
CGTTTGCCGACGCAATACCA+TGG - chr4_4:79307136-79307155 Msa0706350:intron 55.0%
TTCCCTCAACCTGCTCAAGC+TGG - chr4_4:79307291-79307310 Msa0706350:intron 55.0%
! CTCCAGCTTGAGCAGGTTGA+GGG + chr4_4:79307296-79307315 None:intergenic 55.0%
TCTCCAGCTTGAGCAGGTTG+AGG + chr4_4:79307297-79307316 None:intergenic 55.0%
! AAAGCGTCTCCAGCTTGAGC+AGG + chr4_4:79307303-79307322 None:intergenic 55.0%
AATTGGACTGCTGGCCCTGT+CGG - chr4_4:79307402-79307421 Msa0706350:intron 55.0%
CAGGCACTCCTACTAGACCA+GGG + chr4_4:79307661-79307680 None:intergenic 55.0%
ACAGGCACTCCTACTAGACC+AGG + chr4_4:79307662-79307681 None:intergenic 55.0%
CAGCTCAGGTTCGGCTCATT+TGG + chr4_4:79308606-79308625 None:intergenic 55.0%
TCTTCTTCTCCGACGGCCAT+AGG - chr4_4:79308912-79308931 Msa0706350:CDS 55.0%
GAACCGAACTCGTCTGAGCT+CGG + chr4_4:79309692-79309711 None:intergenic 55.0%
GCACCAACTGCTGTCTGTTG+GGG + chr4_4:79310722-79310741 None:intergenic 55.0%
TGTCCAGCTCCATCCCTGAT+TGG + chr4_4:79311569-79311588 None:intergenic 55.0%
GCCAAACTTACGTCCATCCC+TGG - chr4_4:79311985-79312004 Msa0706350:intron 55.0%
CCCAGGGATGGACGTAAGTT+TGG + chr4_4:79311989-79312008 None:intergenic 55.0%
GAGTTGCTGACATTGGACCC+AGG + chr4_4:79312006-79312025 None:intergenic 55.0%
AAGAGGCGGTCATGGAGTTC+TGG + chr4_4:79312337-79312356 None:intergenic 55.0%
CAACGCTGTTCTTCAAGGGG+TGG + chr4_4:79312450-79312469 None:intergenic 55.0%
CCCTCTAGTCATAGCTGGGA+AGG + chr4_4:79312519-79312538 None:intergenic 55.0%
AACCAATCTTGGGCTCCAGG+GGG + chr4_4:79315298-79315317 None:intergenic 55.0%
CAACCAATCTTGGGCTCCAG+GGG + chr4_4:79315299-79315318 None:intergenic 55.0%
CGTTTGCCGATGCAATACCG+TGG - chr4_4:79315373-79315392 Msa0706350:intron 55.0%
AACACCCCGATCTCTTCCCA+CGG + chr4_4:79315393-79315412 None:intergenic 55.0%
! CGGGGTGTTTGTTGATGAGC+AGG - chr4_4:79315404-79315423 Msa0706350:intron 55.0%
! TCTCCTGATTGTGCGGGTTG+GGG + chr4_4:79315534-79315553 None:intergenic 55.0%
CATCTCCTGATTGTGCGGGT+TGG + chr4_4:79315536-79315555 None:intergenic 55.0%
CACGGAAGTTGCCACATGAC+AGG - chr4_4:79315583-79315602 Msa0706350:intron 55.0%
AATTGGACTGCTGGCCCTGT+TGG - chr4_4:79307402-79307421 Msa0706350:intron 55.0%
TTCATAGGGGTCGGTAACCG+AGG - chr4_4:79315745-79315764 Msa0706350:intron 55.0%
CAGACATGCCGACAGCGTGT+TGG + chr4_4:79304624-79304643 None:intergenic 60.0%
TGCTGAATCCCGGGGCTTTC+TGG - chr4_4:79305483-79305502 Msa0706350:CDS 60.0%
!! ATCCCGGGGCTTTCTGGCTT+CGG - chr4_4:79305489-79305508 Msa0706350:CDS 60.0%
ACTCCGAAGCCAGAAAGCCC+CGG + chr4_4:79305495-79305514 None:intergenic 60.0%
! AAAAGCACATCCCGGGGTCC+TGG - chr4_4:79305613-79305632 Msa0706350:intron 60.0%
TTGGAACCGAACAGAGGGGG+CGG - chr4_4:79306148-79306167 Msa0706350:intron 60.0%
AATGGTCCGCCCCCTCTGTT+CGG + chr4_4:79306157-79306176 None:intergenic 60.0%
GGGGGCGGACCATTTCTTTG+TGG - chr4_4:79306163-79306182 Msa0706350:intron 60.0%
TCCAAGGGGCCCATCCAAGT+GGG + chr4_4:79307047-79307066 None:intergenic 60.0%
CACGGAAGTTGCCGCATGAC+AGG - chr4_4:79307346-79307365 Msa0706350:intron 60.0%
AGTTCGCGAGCAGCTCGGTT+CGG + chr4_4:79309583-79309602 None:intergenic 60.0%
GAGCCGAGCTCAGACGAGTT+CGG - chr4_4:79309686-79309705 Msa0706350:intron 60.0%
GGTCCAATCAGGGATGGAGC+TGG - chr4_4:79311563-79311582 Msa0706350:intron 60.0%
GCTGACATTGGACCCAGGGA+TGG + chr4_4:79312001-79312020 None:intergenic 60.0%
AATTCCCTGCCCAACCCCAG+TGG - chr4_4:79312301-79312320 Msa0706350:intron 60.0%
GTAACCACTGGGGTTGGGCA+GGG + chr4_4:79312308-79312327 None:intergenic 60.0%
AGTAACCACTGGGGTTGGGC+AGG + chr4_4:79312309-79312328 None:intergenic 60.0%
! CTTCCGCAAGGGGGTGTGTT+AGG + chr4_4:79313700-79313719 None:intergenic 60.0%
CTAACACACCCCCTTGCGGA+AGG - chr4_4:79313698-79313717 Msa0706350:intron 60.0%
GAGGGATTCTTCCGCTGCTG+CGG - chr4_4:79314561-79314580 Msa0706350:intron 60.0%
AGGTGCAAGAGCAGCGGTGT+GGG - chr4_4:79315167-79315186 Msa0706350:intron 60.0%
TTCCCCCAACCCGCACAATC+AGG - chr4_4:79315528-79315547 Msa0706350:intron 60.0%
!! CTCCTGATTGTGCGGGTTGG+GGG + chr4_4:79315533-79315552 None:intergenic 60.0%
CTCCGAAGCCAGAAAGCCCC+GGG + chr4_4:79305494-79305513 None:intergenic 65.0%
CTCCAAGGGGCCCATCCAAG+TGG + chr4_4:79307048-79307067 None:intergenic 65.0%
GGCCCCTTGGAGCCCAAGAT+TGG - chr4_4:79307056-79307075 Msa0706350:intron 65.0%
!! GCAGCTCGGTTCGGCTCGTT+AGG + chr4_4:79309574-79309593 None:intergenic 65.0%
AAGGTAGCACGCCGCAGCAG+CGG + chr4_4:79314575-79314594 None:intergenic 65.0%
GAGGTGCAAGAGCAGCGGTG+TGG - chr4_4:79315166-79315185 Msa0706350:intron 65.0%
TCCAGGGGGCCCATCCAAGT+GGG + chr4_4:79315284-79315303 None:intergenic 65.0%
GGGGCCCATCCAAGTGGGCA+TGG + chr4_4:79307042-79307061 None:intergenic 70.0%
GCCCACTTGGATGGGCCCCT+TGG - chr4_4:79307043-79307062 Msa0706350:intron 70.0%
GCTGCTGCGGCGTGCTACCT+TGG - chr4_4:79314574-79314593 Msa0706350:intron 70.0%
CTCCAGGGGGCCCATCCAAG+TGG + chr4_4:79315285-79315304 None:intergenic 70.0%
GGCCCCCTGGAGCCCAAGAT+TGG - chr4_4:79315293-79315312 Msa0706350:intron 70.0%
GCCCACTTGGATGGGCCCCC+TGG - chr4_4:79315280-79315299 Msa0706350:intron 75.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 79303670 79316405 79303670 ID=Msa0706350;Name=Msa0706350
chr4_4 mRNA 79303670 79316405 79303670 ID=Msa0706350-mRNA-1;Parent=Msa0706350;Name=Msa0706350-mRNA-1;_AED=0.24;_eAED=0.24;_QI=380|1|1|1|0.75|0.6|5|725|416
chr4_4 exon 79303670 79304908 79303670 ID=Msa0706350-mRNA-1:exon:25554;Parent=Msa0706350-mRNA-1
chr4_4 exon 79305292 79305533 79305292 ID=Msa0706350-mRNA-1:exon:25553;Parent=Msa0706350-mRNA-1
chr4_4 exon 79305658 79306046 79305658 ID=Msa0706350-mRNA-1:exon:25552;Parent=Msa0706350-mRNA-1
chr4_4 exon 79308887 79309074 79308887 ID=Msa0706350-mRNA-1:exon:25551;Parent=Msa0706350-mRNA-1
chr4_4 exon 79316108 79316405 79316108 ID=Msa0706350-mRNA-1:exon:25550;Parent=Msa0706350-mRNA-1
chr4_4 five_prime_UTR 79316108 79316405 79316108 ID=Msa0706350-mRNA-1:five_prime_utr;Parent=Msa0706350-mRNA-1
chr4_4 five_prime_UTR 79308993 79309074 79308993 ID=Msa0706350-mRNA-1:five_prime_utr;Parent=Msa0706350-mRNA-1
chr4_4 CDS 79308887 79308992 79308887 ID=Msa0706350-mRNA-1:cds;Parent=Msa0706350-mRNA-1
chr4_4 CDS 79305658 79306046 79305658 ID=Msa0706350-mRNA-1:cds;Parent=Msa0706350-mRNA-1
chr4_4 CDS 79305292 79305533 79305292 ID=Msa0706350-mRNA-1:cds;Parent=Msa0706350-mRNA-1
chr4_4 CDS 79304395 79304908 79304395 ID=Msa0706350-mRNA-1:cds;Parent=Msa0706350-mRNA-1
chr4_4 three_prime_UTR 79303670 79304394 79303670 ID=Msa0706350-mRNA-1:three_prime_utr;Parent=Msa0706350-mRNA-1
Gene Sequence

>Msa0706350

ATGGGTATTTGGAAATTGGGTTTTTTGGGGATCCTTTGTGTTGCTTTTCTCTTTACAATTGATGCTGTTGAGCTTCGTAGGAATCAACCTACTGAAAGAATTTCAGGTAGTGCTGGTGATGTATTGGAAGATGATCCGGTTGGAAGGTTGAAGGTTTTTGTTTATGAGCTTCCAAGCAAGTATAATAAGAAAATTTTGCAAAAGGACCCAAGATGCCTAACCCATATGTTTGCTGCTGAGATCTTTATGCACCGGTTTCTCTTATCTAGCGCTGTCCGAACCCTTAATCCTGAAGAAGCTGATTGGTTTTATACCCCTGTATACACCACCTGTGACTTGACACCAAATGGCCTCCCTTTACCCTTTAAGTCGCCTCGAATGATGAGAAGTGCCATACAACTTATTTCTTCAAATTGGCCTTATTGGAACCGAACAGAGGGAGCCGATCATTTCTTTGTGGTTCCTCATGACTTTGGGGCATGTTTCCATTACCAAGAAGAGAAGGCAATTGAAAGAGGGATTCTTCCGCTGCTGCGGCGTGCTACCTTGGTTCAAACATTTGGGCAGAGGAATCATGTGTGCTTGAAAGATGGCTCAATAACCATTCCTCCATATGCTCCACCACAGAAAATGCATACCCACTTGATTCCTGATAAGACCCCCAGGTCAATTTTTGTGTACTTCCGAGGACTGTTTTATGATGTTGGAAATGACCCTGAAGGTGGTTATTATGCAAGAGGTGCAAGAGCAGCGGTGTGGGAGAACTTTAAGGACAATCCACTATTTGACATTTCGACGGAGCATCCAACAACATATTACGAGGACATGCAACGAGCCGTGTTTTGTCTATGCCCACTTGGATGGGCCCCCTGGAGCCCAAGATTGGTTGAAGCTGTGGTATTTGGTTGCATTCCTGTTATTATTGCCGATGATATTGTTCTACCGTTTGCCGATGCAATACCGTGGGAAGAGATCGGGGTGTTTGTTGATGAGCAGGATGTTCCCAAGTTGGATACCATACTCACATCGATCCCACCAGAAGTTATACTAAGGAAACAAAGATTGCTTGCCAACCCTTCTATGAAGCAAGCAATGTTATTCCCCCAACCCGCACAATCAGGAGATGCCTTCCATCAAGTTCTAAATGGACTTGCACGGAAGTTGCCACATGACAGGAGTGTATTCTTGAAACAAGGGGAGAAGAGCTTGAATTGGACTGCTGGCCCTGTTGGCGACCTTAAACCTTGGTAG
Protein sequence

>Msa0706350

MGIWKLGFLGILCVAFLFTIDAVELRRNQPTERISGSAGDVLEDDPVGRLKVFVYELPSKYNKKILQKDPRCLTHMFAAEIFMHRFLLSSAVRTLNPEEADWFYTPVYTTCDLTPNGLPLPFKSPRMMRSAIQLISSNWPYWNRTEGADHFFVVPHDFGACFHYQEEKAIERGILPLLRRATLVQTFGQRNHVCLKDGSITIPPYAPPQKMHTHLIPDKTPRSIFVYFRGLFYDVGNDPEGGYYARGARAAVWENFKDNPLFDISTEHPTTYYEDMQRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWEEIGVFVDEQDVPKLDTILTSIPPEVILRKQRLLANPSMKQAMLFPQPAQSGDAFHQVLNGLARKLPHDRSVFLKQGEKSLNWTAGPVGDLKPW*