Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0707670 | XP_003630712.1 | 97.326 | 374 | 10 | 0 | 1 | 374 | 1 | 374 | 0.0 | 741 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0707670 | sp|F4JNX2|SDEH4_ARATH | 34.988 | 403 | 202 | 8 | 18 | 373 | 52 | 441 | 1.48e-68 | 225 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0707670 | G7L7F5 | 97.326 | 374 | 10 | 0 | 1 | 374 | 1 | 374 | 0.0 | 741 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003080 | Msa0707670 | 0.820846 | 5.527716e-53 | -8.615850e-47 |
| Msa0025160 | Msa0707670 | 0.810974 | 8.826084e-51 | -8.615850e-47 |
| Msa0050660 | Msa0707670 | 0.812236 | 4.693468e-51 | -8.615850e-47 |
| Msa0050700 | Msa0707670 | 0.809782 | 1.596390e-50 | -8.615850e-47 |
| Msa0050790 | Msa0707670 | 0.803550 | 3.304950e-49 | -8.615850e-47 |
| Msa0072520 | Msa0707670 | 0.807311 | 5.378025e-50 | -8.615850e-47 |
| Msa0094790 | Msa0707670 | 0.802267 | 6.082684e-49 | -8.615850e-47 |
| Msa0707670 | Msa1072960 | 0.800261 | 1.565553e-48 | -8.615850e-47 |
| Msa0707670 | Msa1160910 | 0.800345 | 1.505728e-48 | -8.615850e-47 |
| Msa0707670 | Msa1192560 | 0.801191 | 1.011652e-48 | -8.615850e-47 |
| Msa0707670 | Msa1352310 | 0.915953 | 3.187516e-85 | -8.615850e-47 |
| Msa0707670 | Msa1393780 | 0.801024 | 1.094277e-48 | -8.615850e-47 |
| Msa0707670 | Msa1440630 | 0.801835 | 7.464391e-49 | -8.615850e-47 |
| Msa0146650 | Msa0707670 | 0.817185 | 3.758652e-52 | -8.615850e-47 |
| Msa0517250 | Msa0707670 | 0.806948 | 6.418201e-50 | -8.615850e-47 |
| Msa0573810 | Msa0707670 | 0.916222 | 2.307670e-85 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0707670 | MtrunA17_Chr8g0389881 | 97.326 | 374 | 10 | 0 | 1 | 374 | 1 | 374 | 0.0 | 741 |
| Msa0707670 | MtrunA17_Chr6g0486861 | 71.543 | 376 | 98 | 6 | 1 | 372 | 1 | 371 | 0.0 | 548 |
| Msa0707670 | MtrunA17_Chr4g0037211 | 36.812 | 345 | 182 | 8 | 35 | 358 | 57 | 386 | 5.98e-67 | 217 |
| Msa0707670 | MtrunA17_Chr5g0405691 | 33.854 | 384 | 187 | 6 | 28 | 358 | 62 | 431 | 1.23e-64 | 213 |
| Msa0707670 | MtrunA17_Chr6g0486881 | 47.845 | 232 | 98 | 6 | 19 | 247 | 9 | 220 | 3.48e-63 | 201 |
| Msa0707670 | MtrunA17_Chr8g0371621 | 30.748 | 361 | 154 | 7 | 8 | 290 | 42 | 384 | 1.34e-42 | 153 |
| Msa0707670 | MtrunA17_Chr8g0361491 | 94.545 | 55 | 3 | 0 | 49 | 103 | 1 | 55 | 1.13e-30 | 111 |
| Msa0707670 | MtrunA17_Chr8g0371611 | 42.424 | 66 | 38 | 0 | 294 | 359 | 5 | 70 | 3.35e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0707670 | AT4G15450.1 | 58.726 | 361 | 125 | 5 | 27 | 370 | 27 | 380 | 1.09e-149 | 428 |
| Msa0707670 | AT4G15450.2 | 57.341 | 361 | 124 | 6 | 27 | 370 | 27 | 374 | 2.90e-143 | 411 |
| Msa0707670 | AT3G21600.1 | 59.599 | 349 | 129 | 5 | 30 | 370 | 29 | 373 | 4.29e-140 | 403 |
| Msa0707670 | AT3G21600.2 | 60.486 | 329 | 118 | 5 | 30 | 350 | 29 | 353 | 5.11e-133 | 385 |
| Msa0707670 | AT3G21600.3 | 53.241 | 216 | 89 | 5 | 30 | 237 | 29 | 240 | 1.49e-74 | 232 |
| Msa0707670 | AT4G35985.1 | 34.988 | 403 | 202 | 8 | 18 | 373 | 52 | 441 | 1.51e-69 | 225 |
| Msa0707670 | AT3G51250.1 | 33.938 | 386 | 185 | 7 | 28 | 356 | 68 | 440 | 5.48e-68 | 221 |
| Msa0707670 | AT2G17840.1 | 34.491 | 403 | 182 | 12 | 13 | 358 | 54 | 431 | 7.21e-60 | 200 |
| Msa0707670 | AT4G35985.3 | 33.237 | 346 | 176 | 7 | 18 | 321 | 52 | 384 | 1.14e-52 | 179 |
| Msa0707670 | AT3G51250.2 | 31.481 | 324 | 152 | 7 | 28 | 294 | 68 | 378 | 1.62e-46 | 163 |
| Msa0707670 | AT2G17840.2 | 32.240 | 366 | 166 | 12 | 13 | 321 | 54 | 394 | 7.96e-45 | 159 |
| Msa0707670 | AT4G35985.2 | 32.301 | 226 | 111 | 5 | 18 | 201 | 52 | 277 | 2.33e-30 | 119 |
| Msa0707670 | AT3G21590.3 | 46.405 | 153 | 79 | 1 | 169 | 321 | 69 | 218 | 4.13e-28 | 110 |
| Msa0707670 | AT3G21590.1 | 43.411 | 129 | 70 | 1 | 169 | 297 | 69 | 194 | 5.21e-19 | 84.7 |
| Msa0707670 | AT3G21590.2 | 43.307 | 127 | 69 | 1 | 169 | 295 | 69 | 192 | 3.34e-18 | 82.8 |
Find 91 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCATCTGCATGACTATTT+AGG | 0.176109 | 4_4:-81095475 | None:intergenic |
| ACAGGCTCATCTTTAGTTAA+AGG | 0.239941 | 4_4:-81094864 | None:intergenic |
| AACTTCTTGCCTAAGGTTCT+TGG | 0.255800 | 4_4:-81094694 | None:intergenic |
| ATCCTTAGGAATGCCTTTCC+TGG | 0.310349 | 4_4:-81095800 | None:intergenic |
| TAATGAGGAACTGGAGAAAA+AGG | 0.314849 | 4_4:-81094528 | None:intergenic |
| GTCTTCAATAGTACTACTTC+TGG | 0.322343 | 4_4:-81094661 | None:intergenic |
| TTAAGCAAATCTTTGCTTAG+TGG | 0.324336 | 4_4:+81095728 | Msa0707670:CDS |
| CAATCAAGTTTCTTTGTACT+TGG | 0.327867 | 4_4:+81096594 | Msa0707670:three_prime_UTR |
| TTTCTATCAAAGCTTATTGC+AGG | 0.332190 | 4_4:+81095104 | Msa0707670:CDS |
| TAGGAATGCCTTTCCTGGTT+GGG | 0.339467 | 4_4:-81095795 | None:intergenic |
| TTATGGAAGTTTGAGTTTGC+TGG | 0.358493 | 4_4:+81094977 | Msa0707670:CDS |
| ATTGATCTTGTTCTTCTTCG+AGG | 0.368375 | 4_4:-81095546 | None:intergenic |
| ACTTCTTGCCTAAGGTTCTT+GGG | 0.373704 | 4_4:-81094693 | None:intergenic |
| GAAATTAAATATTTAAAACT+TGG | 0.383018 | 4_4:-81096572 | None:intergenic |
| CATCTAGAATGGTCTCTAAC+AGG | 0.397131 | 4_4:+81096046 | Msa0707670:CDS |
| CTAAACAAATAAAACCTTGT+TGG | 0.397657 | 4_4:-81095177 | None:intergenic |
| GCTGCCTGGAGAGGTGTTGT+TGG | 0.402177 | 4_4:+81095823 | Msa0707670:CDS |
| CCTCTCCAGGCAGCATCCTT+AGG | 0.416321 | 4_4:-81095814 | None:intergenic |
| CGGGCAACGAAAACAGATAA+TGG | 0.418561 | 4_4:-81094905 | None:intergenic |
| ACTAGCTCAAGGCCATTTCA+TGG | 0.421152 | 4_4:+81094773 | Msa0707670:CDS |
| GGTATGGAGGTTTCCATTGG+TGG | 0.421306 | 4_4:-81094639 | None:intergenic |
| AGTGGTGTTGGCATAGTTAG+TGG | 0.423570 | 4_4:+81095746 | Msa0707670:CDS |
| AGGATGCAAAGTTCATTTGA+TGG | 0.433365 | 4_4:+81094731 | Msa0707670:CDS |
| TGGAACAGTGATAGGCCCTT+TGG | 0.434912 | 4_4:+81095766 | Msa0707670:CDS |
| CTGGGTATGGAGGTTTCCAT+TGG | 0.435087 | 4_4:-81094642 | None:intergenic |
| CTTGCTACAGTTATAAAAGT+AGG | 0.435399 | 4_4:+81094825 | Msa0707670:CDS |
| GAAAGCAACAGCACCAAAGC+AGG | 0.436309 | 4_4:+81094580 | Msa0707670:five_prime_UTR |
| TGCTGAAGAAGCTGGATTGA+TGG | 0.437675 | 4_4:-81096515 | None:intergenic |
| CGGAAATGTTAATGAGGAAC+TGG | 0.445954 | 4_4:-81094537 | None:intergenic |
| CATTCTAGATGCAGCTTTCG+AGG | 0.450865 | 4_4:-81096034 | None:intergenic |
| AGCAACTCATATCCCTGCTT+TGG | 0.455292 | 4_4:-81094593 | None:intergenic |
| AAATCTTTGCTTAGTGGTGT+TGG | 0.456818 | 4_4:+81095734 | Msa0707670:CDS |
| TAGCAGCAAAAGCTTCCTTC+TGG | 0.462110 | 4_4:+81094499 | Msa0707670:five_prime_UTR |
| AACAGGTTTGGGGATAATGC+TGG | 0.462361 | 4_4:+81096415 | Msa0707670:intron |
| ATAGTTAGTGGAACAGTGAT+AGG | 0.465529 | 4_4:+81095758 | Msa0707670:CDS |
| TCCATAACAATCTTCTGAAA+AGG | 0.465570 | 4_4:-81094961 | None:intergenic |
| AAAGTTCATTTGATGGATGA+AGG | 0.470206 | 4_4:+81094738 | Msa0707670:CDS |
| AAGCTTATTGCAGGAGGGAC+TGG | 0.473481 | 4_4:+81095113 | Msa0707670:CDS |
| GTATCAGAACTTCTTGCCTA+AGG | 0.476536 | 4_4:-81094701 | None:intergenic |
| GACATGCAGCTAACACTGCT+TGG | 0.478430 | 4_4:+81096470 | Msa0707670:CDS |
| TCCAGCTTCTTCAGCATCCA+AGG | 0.486437 | 4_4:+81096522 | Msa0707670:CDS |
| TTAGGAATGCCTTTCCTGGT+TGG | 0.492672 | 4_4:-81095796 | None:intergenic |
| GAATGTGTTTAAGATAAGAA+AGG | 0.493342 | 4_4:+81096492 | Msa0707670:CDS |
| GAAGCCAACAACACCTCTCC+AGG | 0.495160 | 4_4:-81095827 | None:intergenic |
| TCTTCAATAGTACTACTTCT+GGG | 0.497590 | 4_4:-81094660 | None:intergenic |
| AAGAGGCTCACCATCTTTCA+CGG | 0.501387 | 4_4:-81094925 | None:intergenic |
| CTCGAAAGCTGCATCTAGAA+TGG | 0.505377 | 4_4:+81096035 | Msa0707670:CDS |
| TTTCATGGTAATCAAAACCT+TGG | 0.507129 | 4_4:+81094788 | Msa0707670:CDS |
| CCCTTGGATGCTGAAGAAGC+TGG | 0.507837 | 4_4:-81096523 | None:intergenic |
| ATGCAGGACCCAAGAACCTT+AGG | 0.511103 | 4_4:+81094685 | Msa0707670:CDS |
| ATCAAATGAACTTTGCATCC+TGG | 0.511507 | 4_4:-81094729 | None:intergenic |
| TTTACTTACTGACTGCATCA+AGG | 0.515962 | 4_4:-81095850 | None:intergenic |
| GGTTAAATCCCAACCAGGAA+AGG | 0.518740 | 4_4:+81095787 | Msa0707670:CDS |
| AATAGTACTACTTCTGGGTA+TGG | 0.522311 | 4_4:-81094655 | None:intergenic |
| CCTGGTTGGGATTTAACCAA+AGG | 0.523788 | 4_4:-81095782 | None:intergenic |
| CATGGTAATCAAAACCTTGG+AGG | 0.527008 | 4_4:+81094791 | Msa0707670:CDS |
| AAGTAGGAGAAGATCTTCAA+TGG | 0.531788 | 4_4:+81094841 | Msa0707670:CDS |
| TTGGAAGGAGTTTGCTCCGA+GGG | 0.533309 | 4_4:+81095064 | Msa0707670:CDS |
| TTACTTACTGACTGCATCAA+GGG | 0.538649 | 4_4:-81095849 | None:intergenic |
| CTATCAAAGCTTATTGCAGG+AGG | 0.540727 | 4_4:+81095107 | Msa0707670:CDS |
| ACAGGTTTGGGGATAATGCT+GGG | 0.544267 | 4_4:+81096416 | Msa0707670:intron |
| CTGGTTGGGATTTAACCAAA+GGG | 0.546559 | 4_4:-81095781 | None:intergenic |
| GCATTCCTAAGGATGCTGCC+TGG | 0.549502 | 4_4:+81095809 | Msa0707670:CDS |
| CCTAAGGATGCTGCCTGGAG+AGG | 0.558020 | 4_4:+81095814 | Msa0707670:CDS |
| GAGCATGTATTTGCAACTGC+GGG | 0.564766 | 4_4:+81096448 | Msa0707670:CDS |
| TGATTGTAATCTTCAACCCT+CGG | 0.567569 | 4_4:-81095080 | None:intergenic |
| AGTACTATTGAAGACTATGC+AGG | 0.580566 | 4_4:+81094669 | Msa0707670:CDS |
| TATCAAAGCTTATTGCAGGA+GGG | 0.582026 | 4_4:+81095108 | Msa0707670:CDS |
| AGAGGCTCACCATCTTTCAC+GGG | 0.590880 | 4_4:-81094924 | None:intergenic |
| AACCAGGAAAGGCATTCCTA+AGG | 0.592978 | 4_4:+81095798 | Msa0707670:CDS |
| GATGGTGAGCCTCTTAGCTA+CGG | 0.597136 | 4_4:+81094933 | Msa0707670:CDS |
| AGTACTACTTCTGGGTATGG+AGG | 0.603110 | 4_4:-81094652 | None:intergenic |
| TTCCATTGGTGGCATAACTG+TGG | 0.603164 | 4_4:-81094628 | None:intergenic |
| AAAGCAACAGCACCAAAGCA+GGG | 0.604722 | 4_4:+81094581 | Msa0707670:five_prime_UTR |
| TTCCACAGTTATGCCACCAA+TGG | 0.606555 | 4_4:+81094626 | Msa0707670:CDS |
| TTGGCCTAACAACAGGTTTG+GGG | 0.609199 | 4_4:+81096405 | Msa0707670:intron |
| CCTTTGGTTAAATCCCAACC+AGG | 0.610932 | 4_4:+81095782 | Msa0707670:CDS |
| AGGGACTGGTCAGATTGTGA+AGG | 0.612855 | 4_4:+81095127 | Msa0707670:CDS |
| CAGCAATGCTTACACCAACA+AGG | 0.615781 | 4_4:+81095163 | Msa0707670:CDS |
| TGGATGCGGAAATGTTAATG+AGG | 0.626187 | 4_4:-81094543 | None:intergenic |
| AAGGTCAAGCCGTAGCTAAG+AGG | 0.626212 | 4_4:-81094942 | None:intergenic |
| GGGACTGGTCAGATTGTGAA+GGG | 0.629455 | 4_4:+81095128 | Msa0707670:CDS |
| CCAGCTTCTTCAGCATCCAA+GGG | 0.644852 | 4_4:+81096523 | Msa0707670:CDS |
| AGTAAGAGCAACAAGAGTGT+CGG | 0.655465 | 4_4:+81095521 | Msa0707670:CDS |
| TTTAACTAAAGATGAGCCTG+TGG | 0.662996 | 4_4:+81094866 | Msa0707670:CDS |
| AGAGCATCTAGCTTCACCAC+AGG | 0.663366 | 4_4:-81094882 | None:intergenic |
| AGAGCATGTATTTGCAACTG+CGG | 0.663824 | 4_4:+81096447 | Msa0707670:CDS |
| TCTAGATGCAGCTTTCGAGG+TGG | 0.663909 | 4_4:-81096031 | None:intergenic |
| GAAGTTCTGATACAAATACC+AGG | 0.674691 | 4_4:+81094711 | Msa0707670:CDS |
| ATTGGAAGGAGTTTGCTCCG+AGG | 0.684090 | 4_4:+81095063 | Msa0707670:CDS |
| CAGGTTTGGGGATAATGCTG+GGG | 0.688874 | 4_4:+81096417 | Msa0707670:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAAATTAAATATTTAAAACT+TGG | - | chr4_4:81096575-81096594 | None:intergenic | 10.0% |
| !!! | GAAATTAAATATTTAAAACT+TGG | - | chr4_4:81096575-81096594 | None:intergenic | 10.0% |
| !! | ATATTAACATATTGATAAAC+AGG | - | chr4_4:81096360-81096379 | None:intergenic | 15.0% |
| !! | TTAAATTAATTCATCATTCT+TGG | + | chr4_4:81096386-81096405 | Msa0707670:intron | 15.0% |
| !! | ATATTAACATATTGATAAAC+AGG | - | chr4_4:81096360-81096379 | None:intergenic | 15.0% |
| !! | TTAAATTAATTCATCATTCT+TGG | + | chr4_4:81096386-81096405 | Msa0707670:intron | 15.0% |
| !!! | ACTAAATGATACTTTTTTCA+TGG | - | chr4_4:81095389-81095408 | None:intergenic | 20.0% |
| !!! | ACAGTAAACTAAGAATTTTT+TGG | + | chr4_4:81095412-81095431 | Msa0707670:intron | 20.0% |
| !!! | CAGTAAACTAAGAATTTTTT+GGG | + | chr4_4:81095413-81095432 | Msa0707670:intron | 20.0% |
| !! | ATTTGGTTAATAGATATATC+AGG | - | chr4_4:81096210-81096229 | None:intergenic | 20.0% |
| !!! | ACTAAATGATACTTTTTTCA+TGG | - | chr4_4:81095389-81095408 | None:intergenic | 20.0% |
| !!! | ACAGTAAACTAAGAATTTTT+TGG | + | chr4_4:81095412-81095431 | Msa0707670:intron | 20.0% |
| !!! | CAGTAAACTAAGAATTTTTT+GGG | + | chr4_4:81095413-81095432 | Msa0707670:intron | 20.0% |
| !! | ATTTGGTTAATAGATATATC+AGG | - | chr4_4:81096210-81096229 | None:intergenic | 20.0% |
| ! | GTAACAAAAATGATCTTGAT+TGG | + | chr4_4:81095045-81095064 | Msa0707670:CDS | 25.0% |
| ! | CTAAACAAATAAAACCTTGT+TGG | - | chr4_4:81095180-81095199 | None:intergenic | 25.0% |
| !!! | AAGGTTTTATTTGTTTAGCA+AGG | + | chr4_4:81095182-81095201 | Msa0707670:intron | 25.0% |
| !!! | AAACTAAGAATTTTTTGGGA+TGG | + | chr4_4:81095417-81095436 | Msa0707670:intron | 25.0% |
| ! | AGATCAATAAAAACCTCAAA+CGG | + | chr4_4:81095561-81095580 | Msa0707670:CDS | 25.0% |
| ! | TAATTTATGTAGTGTACAAG+TGG | + | chr4_4:81095625-81095644 | Msa0707670:intron | 25.0% |
| !!! | TGTCATAAAGTGTTTTTACT+TGG | - | chr4_4:81095882-81095901 | None:intergenic | 25.0% |
| ! | GGTTAATGAAGTTCAATAAA+TGG | + | chr4_4:81096176-81096195 | Msa0707670:intron | 25.0% |
| !! | GAATGTGTTTAAGATAAGAA+AGG | + | chr4_4:81096492-81096511 | Msa0707670:CDS | 25.0% |
| ! | GTAACAAAAATGATCTTGAT+TGG | + | chr4_4:81095045-81095064 | Msa0707670:CDS | 25.0% |
| ! | CTAAACAAATAAAACCTTGT+TGG | - | chr4_4:81095180-81095199 | None:intergenic | 25.0% |
| !!! | AAGGTTTTATTTGTTTAGCA+AGG | + | chr4_4:81095182-81095201 | Msa0707670:intron | 25.0% |
| !!! | AAACTAAGAATTTTTTGGGA+TGG | + | chr4_4:81095417-81095436 | Msa0707670:intron | 25.0% |
| ! | AGATCAATAAAAACCTCAAA+CGG | + | chr4_4:81095561-81095580 | Msa0707670:CDS | 25.0% |
| ! | TAATTTATGTAGTGTACAAG+TGG | + | chr4_4:81095625-81095644 | Msa0707670:intron | 25.0% |
| !!! | TGTCATAAAGTGTTTTTACT+TGG | - | chr4_4:81095882-81095901 | None:intergenic | 25.0% |
| ! | GGTTAATGAAGTTCAATAAA+TGG | + | chr4_4:81096176-81096195 | Msa0707670:intron | 25.0% |
| !! | GAATGTGTTTAAGATAAGAA+AGG | + | chr4_4:81096492-81096511 | Msa0707670:CDS | 25.0% |
| TCTTCAATAGTACTACTTCT+GGG | - | chr4_4:81094663-81094682 | None:intergenic | 30.0% | |
| ! | AAAGTTCATTTGATGGATGA+AGG | + | chr4_4:81094738-81094757 | Msa0707670:CDS | 30.0% |
| !!! | AGGTTTTGATTACCATGAAA+TGG | - | chr4_4:81094788-81094807 | None:intergenic | 30.0% |
| TTTCATGGTAATCAAAACCT+TGG | + | chr4_4:81094788-81094807 | Msa0707670:CDS | 30.0% | |
| CTTGCTACAGTTATAAAAGT+AGG | + | chr4_4:81094825-81094844 | Msa0707670:CDS | 30.0% | |
| ! | ACCTTTTCAGAAGATTGTTA+TGG | + | chr4_4:81094960-81094979 | Msa0707670:CDS | 30.0% |
| ! | TCCATAACAATCTTCTGAAA+AGG | - | chr4_4:81094964-81094983 | None:intergenic | 30.0% |
| CAAAAATGATCTTGATTGGA+AGG | + | chr4_4:81095049-81095068 | Msa0707670:CDS | 30.0% | |
| TTTCTATCAAAGCTTATTGC+AGG | + | chr4_4:81095104-81095123 | Msa0707670:CDS | 30.0% | |
| AAAAATCACCAGGTACAAAA+AGG | + | chr4_4:81095440-81095459 | Msa0707670:intron | 30.0% | |
| !! | TCATTTTTGTATACCGTTTG+AGG | - | chr4_4:81095577-81095596 | None:intergenic | 30.0% |
| TTAAGCAAATCTTTGCTTAG+TGG | + | chr4_4:81095728-81095747 | Msa0707670:CDS | 30.0% | |
| ACAACAACATTGAGCATAAA+GGG | - | chr4_4:81095908-81095927 | None:intergenic | 30.0% | |
| AACAACAACATTGAGCATAA+AGG | - | chr4_4:81095909-81095928 | None:intergenic | 30.0% | |
| ! | GTTTTTGACGCTTAAATTTG+TGG | + | chr4_4:81096155-81096174 | Msa0707670:intron | 30.0% |
| ACACGAAGTTAATGAACATT+TGG | - | chr4_4:81096227-81096246 | None:intergenic | 30.0% | |
| GTTCAGAAGAAATTCTTGAA+TGG | + | chr4_4:81096304-81096323 | Msa0707670:intron | 30.0% | |
| CAATCAAGTTTCTTTGTACT+TGG | + | chr4_4:81096594-81096613 | Msa0707670:three_prime_UTR | 30.0% | |
| TTGGTTGTCAAAAAATGAAG+TGG | + | chr4_4:81096613-81096632 | Msa0707670:three_prime_UTR | 30.0% | |
| TCTTCAATAGTACTACTTCT+GGG | - | chr4_4:81094663-81094682 | None:intergenic | 30.0% | |
| ! | AAAGTTCATTTGATGGATGA+AGG | + | chr4_4:81094738-81094757 | Msa0707670:CDS | 30.0% |
| !!! | AGGTTTTGATTACCATGAAA+TGG | - | chr4_4:81094788-81094807 | None:intergenic | 30.0% |
| TTTCATGGTAATCAAAACCT+TGG | + | chr4_4:81094788-81094807 | Msa0707670:CDS | 30.0% | |
| CTTGCTACAGTTATAAAAGT+AGG | + | chr4_4:81094825-81094844 | Msa0707670:CDS | 30.0% | |
| ! | ACCTTTTCAGAAGATTGTTA+TGG | + | chr4_4:81094960-81094979 | Msa0707670:CDS | 30.0% |
| ! | TCCATAACAATCTTCTGAAA+AGG | - | chr4_4:81094964-81094983 | None:intergenic | 30.0% |
| CAAAAATGATCTTGATTGGA+AGG | + | chr4_4:81095049-81095068 | Msa0707670:CDS | 30.0% | |
| TTTCTATCAAAGCTTATTGC+AGG | + | chr4_4:81095104-81095123 | Msa0707670:CDS | 30.0% | |
| AAAAATCACCAGGTACAAAA+AGG | + | chr4_4:81095440-81095459 | Msa0707670:intron | 30.0% | |
| !! | TCATTTTTGTATACCGTTTG+AGG | - | chr4_4:81095577-81095596 | None:intergenic | 30.0% |
| TTAAGCAAATCTTTGCTTAG+TGG | + | chr4_4:81095728-81095747 | Msa0707670:CDS | 30.0% | |
| ACAACAACATTGAGCATAAA+GGG | - | chr4_4:81095908-81095927 | None:intergenic | 30.0% | |
| AACAACAACATTGAGCATAA+AGG | - | chr4_4:81095909-81095928 | None:intergenic | 30.0% | |
| ! | GTTTTTGACGCTTAAATTTG+TGG | + | chr4_4:81096155-81096174 | Msa0707670:intron | 30.0% |
| ACACGAAGTTAATGAACATT+TGG | - | chr4_4:81096227-81096246 | None:intergenic | 30.0% | |
| GTTCAGAAGAAATTCTTGAA+TGG | + | chr4_4:81096304-81096323 | Msa0707670:intron | 30.0% | |
| CAATCAAGTTTCTTTGTACT+TGG | + | chr4_4:81096594-81096613 | Msa0707670:three_prime_UTR | 30.0% | |
| TTGGTTGTCAAAAAATGAAG+TGG | + | chr4_4:81096613-81096632 | Msa0707670:three_prime_UTR | 30.0% | |
| TAATGAGGAACTGGAGAAAA+AGG | - | chr4_4:81094531-81094550 | None:intergenic | 35.0% | |
| !!! | CTGTTGCTTTCTTTTTCTTC+GGG | - | chr4_4:81094571-81094590 | None:intergenic | 35.0% |
| !!! | GCTGTTGCTTTCTTTTTCTT+CGG | - | chr4_4:81094572-81094591 | None:intergenic | 35.0% |
| !!! | GATATGAGTTGCTGTTTTCA+TGG | + | chr4_4:81094603-81094622 | Msa0707670:exon | 35.0% |
| AATAGTACTACTTCTGGGTA+TGG | - | chr4_4:81094658-81094677 | None:intergenic | 35.0% | |
| GTCTTCAATAGTACTACTTC+TGG | - | chr4_4:81094664-81094683 | None:intergenic | 35.0% | |
| AGTACTATTGAAGACTATGC+AGG | + | chr4_4:81094669-81094688 | Msa0707670:CDS | 35.0% | |
| ! | GAAGTTCTGATACAAATACC+AGG | + | chr4_4:81094711-81094730 | Msa0707670:CDS | 35.0% |
| ATCAAATGAACTTTGCATCC+TGG | - | chr4_4:81094732-81094751 | None:intergenic | 35.0% | |
| AGGATGCAAAGTTCATTTGA+TGG | + | chr4_4:81094731-81094750 | Msa0707670:CDS | 35.0% | |
| ! | AAGAGAAACATTTTCCTCCA+AGG | - | chr4_4:81094808-81094827 | None:intergenic | 35.0% |
| AAGTAGGAGAAGATCTTCAA+TGG | + | chr4_4:81094841-81094860 | Msa0707670:CDS | 35.0% | |
| ACAGGCTCATCTTTAGTTAA+AGG | - | chr4_4:81094867-81094886 | None:intergenic | 35.0% | |
| TTTAACTAAAGATGAGCCTG+TGG | + | chr4_4:81094866-81094885 | Msa0707670:CDS | 35.0% | |
| ! | TTATGGAAGTTTGAGTTTGC+TGG | + | chr4_4:81094977-81094996 | Msa0707670:CDS | 35.0% |
| TGATTGTAATCTTCAACCCT+CGG | - | chr4_4:81095083-81095102 | None:intergenic | 35.0% | |
| TATCAAAGCTTATTGCAGGA+GGG | + | chr4_4:81095108-81095127 | Msa0707670:CDS | 35.0% | |
| TGTATGCATTTCGTAGACTT+GGG | - | chr4_4:81095303-81095322 | None:intergenic | 35.0% | |
| TTGTATGCATTTCGTAGACT+TGG | - | chr4_4:81095304-81095323 | None:intergenic | 35.0% | |
| TCTCATCTGCATGACTATTT+AGG | - | chr4_4:81095478-81095497 | None:intergenic | 35.0% | |
| AGTCATGCAGATGAGAAAAA+TGG | + | chr4_4:81095482-81095501 | Msa0707670:CDS | 35.0% | |
| ATTGATCTTGTTCTTCTTCG+AGG | - | chr4_4:81095549-81095568 | None:intergenic | 35.0% | |
| TGTATTTGCAATGTAGTGTG+AGG | + | chr4_4:81095681-81095700 | Msa0707670:intron | 35.0% | |
| ! | GCTTAACTTTTCTGTCATCT+TGG | - | chr4_4:81095714-81095733 | None:intergenic | 35.0% |
| AAATCTTTGCTTAGTGGTGT+TGG | + | chr4_4:81095734-81095753 | Msa0707670:CDS | 35.0% | |
| ATAGTTAGTGGAACAGTGAT+AGG | + | chr4_4:81095758-81095777 | Msa0707670:CDS | 35.0% | |
| ! | TTACTTACTGACTGCATCAA+GGG | - | chr4_4:81095852-81095871 | None:intergenic | 35.0% |
| ! | TTTACTTACTGACTGCATCA+AGG | - | chr4_4:81095853-81095872 | None:intergenic | 35.0% |
| TATGTGTATGTAGCTGGAAT+TGG | - | chr4_4:81096112-81096131 | None:intergenic | 35.0% | |
| CATACTTATGTGTATGTAGC+TGG | - | chr4_4:81096118-81096137 | None:intergenic | 35.0% | |
| ! | CGTCAAAAACTACGATTTTC+AGG | - | chr4_4:81096145-81096164 | None:intergenic | 35.0% |
| TAATGAGGAACTGGAGAAAA+AGG | - | chr4_4:81094531-81094550 | None:intergenic | 35.0% | |
| !!! | CTGTTGCTTTCTTTTTCTTC+GGG | - | chr4_4:81094571-81094590 | None:intergenic | 35.0% |
| !!! | GCTGTTGCTTTCTTTTTCTT+CGG | - | chr4_4:81094572-81094591 | None:intergenic | 35.0% |
| !!! | GATATGAGTTGCTGTTTTCA+TGG | + | chr4_4:81094603-81094622 | Msa0707670:exon | 35.0% |
| AATAGTACTACTTCTGGGTA+TGG | - | chr4_4:81094658-81094677 | None:intergenic | 35.0% | |
| GTCTTCAATAGTACTACTTC+TGG | - | chr4_4:81094664-81094683 | None:intergenic | 35.0% | |
| AGTACTATTGAAGACTATGC+AGG | + | chr4_4:81094669-81094688 | Msa0707670:CDS | 35.0% | |
| ! | GAAGTTCTGATACAAATACC+AGG | + | chr4_4:81094711-81094730 | Msa0707670:CDS | 35.0% |
| ATCAAATGAACTTTGCATCC+TGG | - | chr4_4:81094732-81094751 | None:intergenic | 35.0% | |
| AGGATGCAAAGTTCATTTGA+TGG | + | chr4_4:81094731-81094750 | Msa0707670:CDS | 35.0% | |
| ! | AAGAGAAACATTTTCCTCCA+AGG | - | chr4_4:81094808-81094827 | None:intergenic | 35.0% |
| AAGTAGGAGAAGATCTTCAA+TGG | + | chr4_4:81094841-81094860 | Msa0707670:CDS | 35.0% | |
| ACAGGCTCATCTTTAGTTAA+AGG | - | chr4_4:81094867-81094886 | None:intergenic | 35.0% | |
| TTTAACTAAAGATGAGCCTG+TGG | + | chr4_4:81094866-81094885 | Msa0707670:CDS | 35.0% | |
| ! | TTATGGAAGTTTGAGTTTGC+TGG | + | chr4_4:81094977-81094996 | Msa0707670:CDS | 35.0% |
| TGATTGTAATCTTCAACCCT+CGG | - | chr4_4:81095083-81095102 | None:intergenic | 35.0% | |
| TATCAAAGCTTATTGCAGGA+GGG | + | chr4_4:81095108-81095127 | Msa0707670:CDS | 35.0% | |
| TGTATGCATTTCGTAGACTT+GGG | - | chr4_4:81095303-81095322 | None:intergenic | 35.0% | |
| TTGTATGCATTTCGTAGACT+TGG | - | chr4_4:81095304-81095323 | None:intergenic | 35.0% | |
| TCTCATCTGCATGACTATTT+AGG | - | chr4_4:81095478-81095497 | None:intergenic | 35.0% | |
| AGTCATGCAGATGAGAAAAA+TGG | + | chr4_4:81095482-81095501 | Msa0707670:CDS | 35.0% | |
| ATTGATCTTGTTCTTCTTCG+AGG | - | chr4_4:81095549-81095568 | None:intergenic | 35.0% | |
| TGTATTTGCAATGTAGTGTG+AGG | + | chr4_4:81095681-81095700 | Msa0707670:intron | 35.0% | |
| ! | GCTTAACTTTTCTGTCATCT+TGG | - | chr4_4:81095714-81095733 | None:intergenic | 35.0% |
| AAATCTTTGCTTAGTGGTGT+TGG | + | chr4_4:81095734-81095753 | Msa0707670:CDS | 35.0% | |
| ATAGTTAGTGGAACAGTGAT+AGG | + | chr4_4:81095758-81095777 | Msa0707670:CDS | 35.0% | |
| ! | TTACTTACTGACTGCATCAA+GGG | - | chr4_4:81095852-81095871 | None:intergenic | 35.0% |
| ! | TTTACTTACTGACTGCATCA+AGG | - | chr4_4:81095853-81095872 | None:intergenic | 35.0% |
| TATGTGTATGTAGCTGGAAT+TGG | - | chr4_4:81096112-81096131 | None:intergenic | 35.0% | |
| CATACTTATGTGTATGTAGC+TGG | - | chr4_4:81096118-81096137 | None:intergenic | 35.0% | |
| ! | CGTCAAAAACTACGATTTTC+AGG | - | chr4_4:81096145-81096164 | None:intergenic | 35.0% |
| AGAAAAAGGTAAAGGCCAGA+AGG | - | chr4_4:81094517-81094536 | None:intergenic | 40.0% | |
| GGAACTGGAGAAAAAGGTAA+AGG | - | chr4_4:81094525-81094544 | None:intergenic | 40.0% | |
| CGGAAATGTTAATGAGGAAC+TGG | - | chr4_4:81094540-81094559 | None:intergenic | 40.0% | |
| TGGATGCGGAAATGTTAATG+AGG | - | chr4_4:81094546-81094565 | None:intergenic | 40.0% | |
| ACTTCTTGCCTAAGGTTCTT+GGG | - | chr4_4:81094696-81094715 | None:intergenic | 40.0% | |
| AACTTCTTGCCTAAGGTTCT+TGG | - | chr4_4:81094697-81094716 | None:intergenic | 40.0% | |
| GTATCAGAACTTCTTGCCTA+AGG | - | chr4_4:81094704-81094723 | None:intergenic | 40.0% | |
| ! | GAAGCTTTTGAACTAGCTCA+AGG | + | chr4_4:81094762-81094781 | Msa0707670:CDS | 40.0% |
| CATGGTAATCAAAACCTTGG+AGG | + | chr4_4:81094791-81094810 | Msa0707670:CDS | 40.0% | |
| !!! | AAAGAGCACTCTTGCTTTTC+TGG | + | chr4_4:81095011-81095030 | Msa0707670:CDS | 40.0% |
| CTATCAAAGCTTATTGCAGG+AGG | + | chr4_4:81095107-81095126 | Msa0707670:CDS | 40.0% | |
| ! | TTTGGGATGGAAAAATCACC+AGG | + | chr4_4:81095430-81095449 | Msa0707670:intron | 40.0% |
| AATCACCAGGTACAAAAAGG+AGG | + | chr4_4:81095443-81095462 | Msa0707670:intron | 40.0% | |
| ! | TTTCTCCTCCTTTTTGTACC+TGG | - | chr4_4:81095451-81095470 | None:intergenic | 40.0% |
| ! | AGATGAGAAAAATGGTGCTG+TGG | + | chr4_4:81095490-81095509 | Msa0707670:CDS | 40.0% |
| ! | AGTAAGAGCAACAAGAGTGT+CGG | + | chr4_4:81095521-81095540 | Msa0707670:CDS | 40.0% |
| TGTAGTGTACAAGTGGATGA+TGG | + | chr4_4:81095632-81095651 | Msa0707670:intron | 40.0% | |
| CTGGTTGGGATTTAACCAAA+GGG | - | chr4_4:81095784-81095803 | None:intergenic | 40.0% | |
| ! | CATCTAGAATGGTCTCTAAC+AGG | + | chr4_4:81096046-81096065 | Msa0707670:CDS | 40.0% |
| GAATGGTCTCTAACAGGTAA+AGG | + | chr4_4:81096052-81096071 | Msa0707670:intron | 40.0% | |
| AGTAAGTAGAGTCAGCTGTT+TGG | - | chr4_4:81096089-81096108 | None:intergenic | 40.0% | |
| ATCATTCTTGGCCTAACAAC+AGG | + | chr4_4:81096398-81096417 | Msa0707670:intron | 40.0% | |
| TTATCCCCAAACCTGTTGTT+AGG | - | chr4_4:81096412-81096431 | None:intergenic | 40.0% | |
| AGAGCATGTATTTGCAACTG+CGG | + | chr4_4:81096447-81096466 | Msa0707670:CDS | 40.0% | |
| AGAAAAAGGTAAAGGCCAGA+AGG | - | chr4_4:81094517-81094536 | None:intergenic | 40.0% | |
| GGAACTGGAGAAAAAGGTAA+AGG | - | chr4_4:81094525-81094544 | None:intergenic | 40.0% | |
| CGGAAATGTTAATGAGGAAC+TGG | - | chr4_4:81094540-81094559 | None:intergenic | 40.0% | |
| TGGATGCGGAAATGTTAATG+AGG | - | chr4_4:81094546-81094565 | None:intergenic | 40.0% | |
| ACTTCTTGCCTAAGGTTCTT+GGG | - | chr4_4:81094696-81094715 | None:intergenic | 40.0% | |
| AACTTCTTGCCTAAGGTTCT+TGG | - | chr4_4:81094697-81094716 | None:intergenic | 40.0% | |
| GTATCAGAACTTCTTGCCTA+AGG | - | chr4_4:81094704-81094723 | None:intergenic | 40.0% | |
| ! | GAAGCTTTTGAACTAGCTCA+AGG | + | chr4_4:81094762-81094781 | Msa0707670:CDS | 40.0% |
| CATGGTAATCAAAACCTTGG+AGG | + | chr4_4:81094791-81094810 | Msa0707670:CDS | 40.0% | |
| !!! | AAAGAGCACTCTTGCTTTTC+TGG | + | chr4_4:81095011-81095030 | Msa0707670:CDS | 40.0% |
| CTATCAAAGCTTATTGCAGG+AGG | + | chr4_4:81095107-81095126 | Msa0707670:CDS | 40.0% | |
| ! | TTTGGGATGGAAAAATCACC+AGG | + | chr4_4:81095430-81095449 | Msa0707670:intron | 40.0% |
| AATCACCAGGTACAAAAAGG+AGG | + | chr4_4:81095443-81095462 | Msa0707670:intron | 40.0% | |
| ! | TTTCTCCTCCTTTTTGTACC+TGG | - | chr4_4:81095451-81095470 | None:intergenic | 40.0% |
| ! | AGATGAGAAAAATGGTGCTG+TGG | + | chr4_4:81095490-81095509 | Msa0707670:CDS | 40.0% |
| ! | AGTAAGAGCAACAAGAGTGT+CGG | + | chr4_4:81095521-81095540 | Msa0707670:CDS | 40.0% |
| TGTAGTGTACAAGTGGATGA+TGG | + | chr4_4:81095632-81095651 | Msa0707670:intron | 40.0% | |
| CTGGTTGGGATTTAACCAAA+GGG | - | chr4_4:81095784-81095803 | None:intergenic | 40.0% | |
| ! | CATCTAGAATGGTCTCTAAC+AGG | + | chr4_4:81096046-81096065 | Msa0707670:CDS | 40.0% |
| GAATGGTCTCTAACAGGTAA+AGG | + | chr4_4:81096052-81096071 | Msa0707670:intron | 40.0% | |
| AGTAAGTAGAGTCAGCTGTT+TGG | - | chr4_4:81096089-81096108 | None:intergenic | 40.0% | |
| ATCATTCTTGGCCTAACAAC+AGG | + | chr4_4:81096398-81096417 | Msa0707670:intron | 40.0% | |
| TTATCCCCAAACCTGTTGTT+AGG | - | chr4_4:81096412-81096431 | None:intergenic | 40.0% | |
| AGAGCATGTATTTGCAACTG+CGG | + | chr4_4:81096447-81096466 | Msa0707670:CDS | 40.0% | |
| ! | GAAGGAAGCTTTTGCTGCTA+TGG | - | chr4_4:81094499-81094518 | None:intergenic | 45.0% |
| TAGCAGCAAAAGCTTCCTTC+TGG | + | chr4_4:81094499-81094518 | Msa0707670:five_prime_UTR | 45.0% | |
| ! | TTTTTCTTCGGGAGTGGATG+CGG | - | chr4_4:81094560-81094579 | None:intergenic | 45.0% |
| ! | GCTTTCTTTTTCTTCGGGAG+TGG | - | chr4_4:81094566-81094585 | None:intergenic | 45.0% |
| AAAGCAACAGCACCAAAGCA+GGG | + | chr4_4:81094581-81094600 | Msa0707670:five_prime_UTR | 45.0% | |
| AGCAACTCATATCCCTGCTT+TGG | - | chr4_4:81094596-81094615 | None:intergenic | 45.0% | |
| TTCCACAGTTATGCCACCAA+TGG | + | chr4_4:81094626-81094645 | Msa0707670:CDS | 45.0% | |
| ! | TTCCATTGGTGGCATAACTG+TGG | - | chr4_4:81094631-81094650 | None:intergenic | 45.0% |
| AGTACTACTTCTGGGTATGG+AGG | - | chr4_4:81094655-81094674 | None:intergenic | 45.0% | |
| ACTAGCTCAAGGCCATTTCA+TGG | + | chr4_4:81094773-81094792 | Msa0707670:CDS | 45.0% | |
| CGGGCAACGAAAACAGATAA+TGG | - | chr4_4:81094908-81094927 | None:intergenic | 45.0% | |
| ! | TTTTCGTTGCCCGTGAAAGA+TGG | + | chr4_4:81094915-81094934 | Msa0707670:CDS | 45.0% |
| AAGAGGCTCACCATCTTTCA+CGG | - | chr4_4:81094928-81094947 | None:intergenic | 45.0% | |
| CAGCAATGCTTACACCAACA+AGG | + | chr4_4:81095163-81095182 | Msa0707670:CDS | 45.0% | |
| ! | ACAATGAGAGTGTGTGACAC+TGG | + | chr4_4:81095320-81095339 | Msa0707670:intron | 45.0% |
| !! | AGAAAAATGGTGCTGTGGTC+AGG | + | chr4_4:81095495-81095514 | Msa0707670:CDS | 45.0% |
| !! | GAAAAATGGTGCTGTGGTCA+GGG | + | chr4_4:81095496-81095515 | Msa0707670:CDS | 45.0% |
| !! | AGTGGTGTTGGCATAGTTAG+TGG | + | chr4_4:81095746-81095765 | Msa0707670:CDS | 45.0% |
| CCTGGTTGGGATTTAACCAA+AGG | - | chr4_4:81095785-81095804 | None:intergenic | 45.0% | |
| CCTTTGGTTAAATCCCAACC+AGG | + | chr4_4:81095782-81095801 | Msa0707670:CDS | 45.0% | |
| GGTTAAATCCCAACCAGGAA+AGG | + | chr4_4:81095787-81095806 | Msa0707670:CDS | 45.0% | |
| TAGGAATGCCTTTCCTGGTT+GGG | - | chr4_4:81095798-81095817 | None:intergenic | 45.0% | |
| TTAGGAATGCCTTTCCTGGT+TGG | - | chr4_4:81095799-81095818 | None:intergenic | 45.0% | |
| !! | AACCAGGAAAGGCATTCCTA+AGG | + | chr4_4:81095798-81095817 | Msa0707670:CDS | 45.0% |
| ATCCTTAGGAATGCCTTTCC+TGG | - | chr4_4:81095803-81095822 | None:intergenic | 45.0% | |
| CATTCTAGATGCAGCTTTCG+AGG | - | chr4_4:81096037-81096056 | None:intergenic | 45.0% | |
| CTCGAAAGCTGCATCTAGAA+TGG | + | chr4_4:81096035-81096054 | Msa0707670:CDS | 45.0% | |
| TCTTGGCCTAACAACAGGTT+TGG | + | chr4_4:81096403-81096422 | Msa0707670:intron | 45.0% | |
| CTTGGCCTAACAACAGGTTT+GGG | + | chr4_4:81096404-81096423 | Msa0707670:intron | 45.0% | |
| TTGGCCTAACAACAGGTTTG+GGG | + | chr4_4:81096405-81096424 | Msa0707670:intron | 45.0% | |
| AACAGGTTTGGGGATAATGC+TGG | + | chr4_4:81096415-81096434 | Msa0707670:intron | 45.0% | |
| ACAGGTTTGGGGATAATGCT+GGG | + | chr4_4:81096416-81096435 | Msa0707670:intron | 45.0% | |
| GAGCATGTATTTGCAACTGC+GGG | + | chr4_4:81096448-81096467 | Msa0707670:CDS | 45.0% | |
| TGCTGAAGAAGCTGGATTGA+TGG | - | chr4_4:81096518-81096537 | None:intergenic | 45.0% | |
| !! | AGCATTTTTCAGTACGCCCT+TGG | - | chr4_4:81096542-81096561 | None:intergenic | 45.0% |
| ! | GAAGGAAGCTTTTGCTGCTA+TGG | - | chr4_4:81094499-81094518 | None:intergenic | 45.0% |
| TAGCAGCAAAAGCTTCCTTC+TGG | + | chr4_4:81094499-81094518 | Msa0707670:five_prime_UTR | 45.0% | |
| ! | TTTTTCTTCGGGAGTGGATG+CGG | - | chr4_4:81094560-81094579 | None:intergenic | 45.0% |
| ! | GCTTTCTTTTTCTTCGGGAG+TGG | - | chr4_4:81094566-81094585 | None:intergenic | 45.0% |
| AAAGCAACAGCACCAAAGCA+GGG | + | chr4_4:81094581-81094600 | Msa0707670:five_prime_UTR | 45.0% | |
| AGCAACTCATATCCCTGCTT+TGG | - | chr4_4:81094596-81094615 | None:intergenic | 45.0% | |
| TTCCACAGTTATGCCACCAA+TGG | + | chr4_4:81094626-81094645 | Msa0707670:CDS | 45.0% | |
| ! | TTCCATTGGTGGCATAACTG+TGG | - | chr4_4:81094631-81094650 | None:intergenic | 45.0% |
| AGTACTACTTCTGGGTATGG+AGG | - | chr4_4:81094655-81094674 | None:intergenic | 45.0% | |
| ACTAGCTCAAGGCCATTTCA+TGG | + | chr4_4:81094773-81094792 | Msa0707670:CDS | 45.0% | |
| CGGGCAACGAAAACAGATAA+TGG | - | chr4_4:81094908-81094927 | None:intergenic | 45.0% | |
| ! | TTTTCGTTGCCCGTGAAAGA+TGG | + | chr4_4:81094915-81094934 | Msa0707670:CDS | 45.0% |
| AAGAGGCTCACCATCTTTCA+CGG | - | chr4_4:81094928-81094947 | None:intergenic | 45.0% | |
| CAGCAATGCTTACACCAACA+AGG | + | chr4_4:81095163-81095182 | Msa0707670:CDS | 45.0% | |
| ! | ACAATGAGAGTGTGTGACAC+TGG | + | chr4_4:81095320-81095339 | Msa0707670:intron | 45.0% |
| !! | AGAAAAATGGTGCTGTGGTC+AGG | + | chr4_4:81095495-81095514 | Msa0707670:CDS | 45.0% |
| !! | GAAAAATGGTGCTGTGGTCA+GGG | + | chr4_4:81095496-81095515 | Msa0707670:CDS | 45.0% |
| !! | AGTGGTGTTGGCATAGTTAG+TGG | + | chr4_4:81095746-81095765 | Msa0707670:CDS | 45.0% |
| CCTGGTTGGGATTTAACCAA+AGG | - | chr4_4:81095785-81095804 | None:intergenic | 45.0% | |
| CCTTTGGTTAAATCCCAACC+AGG | + | chr4_4:81095782-81095801 | Msa0707670:CDS | 45.0% | |
| GGTTAAATCCCAACCAGGAA+AGG | + | chr4_4:81095787-81095806 | Msa0707670:CDS | 45.0% | |
| TAGGAATGCCTTTCCTGGTT+GGG | - | chr4_4:81095798-81095817 | None:intergenic | 45.0% | |
| TTAGGAATGCCTTTCCTGGT+TGG | - | chr4_4:81095799-81095818 | None:intergenic | 45.0% | |
| !! | AACCAGGAAAGGCATTCCTA+AGG | + | chr4_4:81095798-81095817 | Msa0707670:CDS | 45.0% |
| ATCCTTAGGAATGCCTTTCC+TGG | - | chr4_4:81095803-81095822 | None:intergenic | 45.0% | |
| CATTCTAGATGCAGCTTTCG+AGG | - | chr4_4:81096037-81096056 | None:intergenic | 45.0% | |
| CTCGAAAGCTGCATCTAGAA+TGG | + | chr4_4:81096035-81096054 | Msa0707670:CDS | 45.0% | |
| TCTTGGCCTAACAACAGGTT+TGG | + | chr4_4:81096403-81096422 | Msa0707670:intron | 45.0% | |
| CTTGGCCTAACAACAGGTTT+GGG | + | chr4_4:81096404-81096423 | Msa0707670:intron | 45.0% | |
| TTGGCCTAACAACAGGTTTG+GGG | + | chr4_4:81096405-81096424 | Msa0707670:intron | 45.0% | |
| AACAGGTTTGGGGATAATGC+TGG | + | chr4_4:81096415-81096434 | Msa0707670:intron | 45.0% | |
| ACAGGTTTGGGGATAATGCT+GGG | + | chr4_4:81096416-81096435 | Msa0707670:intron | 45.0% | |
| GAGCATGTATTTGCAACTGC+GGG | + | chr4_4:81096448-81096467 | Msa0707670:CDS | 45.0% | |
| TGCTGAAGAAGCTGGATTGA+TGG | - | chr4_4:81096518-81096537 | None:intergenic | 45.0% | |
| !! | AGCATTTTTCAGTACGCCCT+TGG | - | chr4_4:81096542-81096561 | None:intergenic | 45.0% |
| GAAAGCAACAGCACCAAAGC+AGG | + | chr4_4:81094580-81094599 | Msa0707670:five_prime_UTR | 50.0% | |
| GGTATGGAGGTTTCCATTGG+TGG | - | chr4_4:81094642-81094661 | None:intergenic | 50.0% | |
| CTGGGTATGGAGGTTTCCAT+TGG | - | chr4_4:81094645-81094664 | None:intergenic | 50.0% | |
| ATGCAGGACCCAAGAACCTT+AGG | + | chr4_4:81094685-81094704 | Msa0707670:CDS | 50.0% | |
| ! | AGAGCATCTAGCTTCACCAC+AGG | - | chr4_4:81094885-81094904 | None:intergenic | 50.0% |
| AGAGGCTCACCATCTTTCAC+GGG | - | chr4_4:81094927-81094946 | None:intergenic | 50.0% | |
| GATGGTGAGCCTCTTAGCTA+CGG | + | chr4_4:81094933-81094952 | Msa0707670:CDS | 50.0% | |
| AAGGTCAAGCCGTAGCTAAG+AGG | - | chr4_4:81094945-81094964 | None:intergenic | 50.0% | |
| ! | ATTGGAAGGAGTTTGCTCCG+AGG | + | chr4_4:81095063-81095082 | Msa0707670:CDS | 50.0% |
| ! | TTGGAAGGAGTTTGCTCCGA+GGG | + | chr4_4:81095064-81095083 | Msa0707670:CDS | 50.0% |
| AAGCTTATTGCAGGAGGGAC+TGG | + | chr4_4:81095113-81095132 | Msa0707670:CDS | 50.0% | |
| !! | AGGGACTGGTCAGATTGTGA+AGG | + | chr4_4:81095127-81095146 | Msa0707670:CDS | 50.0% |
| !! | GGGACTGGTCAGATTGTGAA+GGG | + | chr4_4:81095128-81095147 | Msa0707670:CDS | 50.0% |
| TGGAACAGTGATAGGCCCTT+TGG | + | chr4_4:81095766-81095785 | Msa0707670:CDS | 50.0% | |
| TCTAGATGCAGCTTTCGAGG+TGG | - | chr4_4:81096034-81096053 | None:intergenic | 50.0% | |
| GGTCTCTAACAGGTAAAGGC+TGG | + | chr4_4:81096056-81096075 | Msa0707670:intron | 50.0% | |
| CAGGTTTGGGGATAATGCTG+GGG | + | chr4_4:81096417-81096436 | Msa0707670:intron | 50.0% | |
| GACATGCAGCTAACACTGCT+TGG | + | chr4_4:81096470-81096489 | Msa0707670:CDS | 50.0% | |
| TCCAGCTTCTTCAGCATCCA+AGG | + | chr4_4:81096522-81096541 | Msa0707670:CDS | 50.0% | |
| CCAGCTTCTTCAGCATCCAA+GGG | + | chr4_4:81096523-81096542 | Msa0707670:CDS | 50.0% | |
| GAAAGCAACAGCACCAAAGC+AGG | + | chr4_4:81094580-81094599 | Msa0707670:five_prime_UTR | 50.0% | |
| GGTATGGAGGTTTCCATTGG+TGG | - | chr4_4:81094642-81094661 | None:intergenic | 50.0% | |
| CTGGGTATGGAGGTTTCCAT+TGG | - | chr4_4:81094645-81094664 | None:intergenic | 50.0% | |
| ATGCAGGACCCAAGAACCTT+AGG | + | chr4_4:81094685-81094704 | Msa0707670:CDS | 50.0% | |
| ! | AGAGCATCTAGCTTCACCAC+AGG | - | chr4_4:81094885-81094904 | None:intergenic | 50.0% |
| AGAGGCTCACCATCTTTCAC+GGG | - | chr4_4:81094927-81094946 | None:intergenic | 50.0% | |
| GATGGTGAGCCTCTTAGCTA+CGG | + | chr4_4:81094933-81094952 | Msa0707670:CDS | 50.0% | |
| AAGGTCAAGCCGTAGCTAAG+AGG | - | chr4_4:81094945-81094964 | None:intergenic | 50.0% | |
| ! | ATTGGAAGGAGTTTGCTCCG+AGG | + | chr4_4:81095063-81095082 | Msa0707670:CDS | 50.0% |
| ! | TTGGAAGGAGTTTGCTCCGA+GGG | + | chr4_4:81095064-81095083 | Msa0707670:CDS | 50.0% |
| AAGCTTATTGCAGGAGGGAC+TGG | + | chr4_4:81095113-81095132 | Msa0707670:CDS | 50.0% | |
| !! | AGGGACTGGTCAGATTGTGA+AGG | + | chr4_4:81095127-81095146 | Msa0707670:CDS | 50.0% |
| !! | GGGACTGGTCAGATTGTGAA+GGG | + | chr4_4:81095128-81095147 | Msa0707670:CDS | 50.0% |
| TGGAACAGTGATAGGCCCTT+TGG | + | chr4_4:81095766-81095785 | Msa0707670:CDS | 50.0% | |
| TCTAGATGCAGCTTTCGAGG+TGG | - | chr4_4:81096034-81096053 | None:intergenic | 50.0% | |
| GGTCTCTAACAGGTAAAGGC+TGG | + | chr4_4:81096056-81096075 | Msa0707670:intron | 50.0% | |
| CAGGTTTGGGGATAATGCTG+GGG | + | chr4_4:81096417-81096436 | Msa0707670:intron | 50.0% | |
| GACATGCAGCTAACACTGCT+TGG | + | chr4_4:81096470-81096489 | Msa0707670:CDS | 50.0% | |
| TCCAGCTTCTTCAGCATCCA+AGG | + | chr4_4:81096522-81096541 | Msa0707670:CDS | 50.0% | |
| CCAGCTTCTTCAGCATCCAA+GGG | + | chr4_4:81096523-81096542 | Msa0707670:CDS | 50.0% | |
| GCATTCCTAAGGATGCTGCC+TGG | + | chr4_4:81095809-81095828 | Msa0707670:CDS | 55.0% | |
| GAAGCCAACAACACCTCTCC+AGG | - | chr4_4:81095830-81095849 | None:intergenic | 55.0% | |
| CCCTTGGATGCTGAAGAAGC+TGG | - | chr4_4:81096526-81096545 | None:intergenic | 55.0% | |
| GCATTCCTAAGGATGCTGCC+TGG | + | chr4_4:81095809-81095828 | Msa0707670:CDS | 55.0% | |
| GAAGCCAACAACACCTCTCC+AGG | - | chr4_4:81095830-81095849 | None:intergenic | 55.0% | |
| CCCTTGGATGCTGAAGAAGC+TGG | - | chr4_4:81096526-81096545 | None:intergenic | 55.0% | |
| CCTCTCCAGGCAGCATCCTT+AGG | - | chr4_4:81095817-81095836 | None:intergenic | 60.0% | |
| CCTAAGGATGCTGCCTGGAG+AGG | + | chr4_4:81095814-81095833 | Msa0707670:CDS | 60.0% | |
| !! | GCTGCCTGGAGAGGTGTTGT+TGG | + | chr4_4:81095823-81095842 | Msa0707670:CDS | 60.0% |
| CCTCTCCAGGCAGCATCCTT+AGG | - | chr4_4:81095817-81095836 | None:intergenic | 60.0% | |
| CCTAAGGATGCTGCCTGGAG+AGG | + | chr4_4:81095814-81095833 | Msa0707670:CDS | 60.0% | |
| !! | GCTGCCTGGAGAGGTGTTGT+TGG | + | chr4_4:81095823-81095842 | Msa0707670:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 81094488 | 81096676 | 81094488 | ID=Msa0707670;Name=Msa0707670 |
| chr4_4 | mRNA | 81094488 | 81096676 | 81094488 | ID=Msa0707670-mRNA-1;Parent=Msa0707670;Name=Msa0707670-mRNA-1;_AED=0.35;_eAED=0.35;_QI=118|1|1|1|1|1|5|94|374 |
| chr4_4 | exon | 81094488 | 81095184 | 81094488 | ID=Msa0707670-mRNA-1:exon:26494;Parent=Msa0707670-mRNA-1 |
| chr4_4 | exon | 81095452 | 81095582 | 81095452 | ID=Msa0707670-mRNA-1:exon:26495;Parent=Msa0707670-mRNA-1 |
| chr4_4 | exon | 81095697 | 81095863 | 81095697 | ID=Msa0707670-mRNA-1:exon:26496;Parent=Msa0707670-mRNA-1 |
| chr4_4 | exon | 81095983 | 81096067 | 81095983 | ID=Msa0707670-mRNA-1:exon:26497;Parent=Msa0707670-mRNA-1 |
| chr4_4 | exon | 81096420 | 81096676 | 81096420 | ID=Msa0707670-mRNA-1:exon:26498;Parent=Msa0707670-mRNA-1 |
| chr4_4 | five_prime_UTR | 81094488 | 81094605 | 81094488 | ID=Msa0707670-mRNA-1:five_prime_utr;Parent=Msa0707670-mRNA-1 |
| chr4_4 | CDS | 81094606 | 81095184 | 81094606 | ID=Msa0707670-mRNA-1:cds;Parent=Msa0707670-mRNA-1 |
| chr4_4 | CDS | 81095452 | 81095582 | 81095452 | ID=Msa0707670-mRNA-1:cds;Parent=Msa0707670-mRNA-1 |
| chr4_4 | CDS | 81095697 | 81095863 | 81095697 | ID=Msa0707670-mRNA-1:cds;Parent=Msa0707670-mRNA-1 |
| chr4_4 | CDS | 81095983 | 81096067 | 81095983 | ID=Msa0707670-mRNA-1:cds;Parent=Msa0707670-mRNA-1 |
| chr4_4 | CDS | 81096420 | 81096582 | 81096420 | ID=Msa0707670-mRNA-1:cds;Parent=Msa0707670-mRNA-1 |
| chr4_4 | three_prime_UTR | 81096583 | 81096676 | 81096583 | ID=Msa0707670-mRNA-1:three_prime_utr;Parent=Msa0707670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
