AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0707890

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0707890 MtrunA17_Chr8g0390521 96.573 496 17 0 1 496 1 496 0.0 962
Msa0707890 MtrunA17_Chr6g0485661 67.686 458 145 2 7 463 47 502 0.0 630
Msa0707890 MtrunA17_Chr4g0034681 50.102 491 236 3 15 496 27 517 2.44e-169 489
Msa0707890 MtrunA17_Chr8g0373531 50.924 487 229 4 3 479 4 490 1.49e-165 478
Msa0707890 MtrunA17_Chr3g0144361 50.833 480 221 3 2 471 17 491 2.85e-164 476
Msa0707890 MtrunA17_Chr4g0036021 50.321 467 225 2 12 471 21 487 5.18e-161 468
Msa0707890 MtrunA17_Chr5g0432581 47.571 494 249 4 1 484 2 495 2.31e-160 465
Msa0707890 MtrunA17_Chr2g0282031 47.669 472 236 4 15 486 50 510 5.00e-155 452
Msa0707890 MtrunA17_Chr4g0021771 45.303 479 251 4 8 486 45 512 5.76e-154 450
Msa0707890 MtrunA17_Chr5g0403831 41.051 514 276 4 1 490 1 511 2.17e-126 379
Msa0707890 MtrunA17_Chr4g0039651 32.696 471 271 10 23 469 50 498 1.49e-66 223
Msa0707890 MtrunA17_Chr5g0417611 29.697 495 310 10 3 471 8 490 1.49e-61 210
Msa0707890 MtrunA17_Chr4g0032021 31.780 472 285 12 19 469 97 552 1.68e-61 211
Msa0707890 MtrunA17_Chr1g0213611 31.942 479 299 11 7 473 67 530 2.38e-61 211
Msa0707890 MtrunA17_Chr1g0213631 31.169 462 291 9 37 486 4 450 1.37e-59 204
Msa0707890 MtrunA17_Chr7g0214451 30.785 484 312 7 15 489 30 499 1.63e-59 204
Msa0707890 MtrunA17_Chr5g0394341 27.953 508 314 10 13 483 17 509 2.25e-58 202
Msa0707890 MtrunA17_Chr3g0115781 26.706 513 332 9 1 481 8 508 4.02e-58 201
Msa0707890 MtrunA17_Chr8g0390261 27.308 509 319 11 13 487 21 512 1.57e-57 199
Msa0707890 MtrunA17_Chr3g0078991 28.425 489 318 8 7 473 12 490 6.09e-57 198
Msa0707890 MtrunA17_Chr5g0420841 28.343 501 310 11 19 483 22 509 9.01e-57 197
Msa0707890 MtrunA17_Chr4g0065311 27.869 488 316 9 6 471 9 482 1.76e-56 196
Msa0707890 MtrunA17_Chr3g0115721 27.888 502 314 10 13 480 18 505 2.24e-56 196
Msa0707890 MtrunA17_Chr6g0457781 31.461 445 281 10 28 468 115 539 3.55e-56 196
Msa0707890 MtrunA17_Chr3g0078971 26.908 498 325 10 1 474 8 490 5.31e-56 195
Msa0707890 MtrunA17_Chr7g0250881 30.735 449 279 9 28 468 75 499 6.74e-56 195
Msa0707890 MtrunA17_Chr6g0486681 27.022 507 326 10 13 492 21 510 1.28e-55 194
Msa0707890 MtrunA17_Chr6g0486671 27.022 507 326 10 13 492 21 510 1.28e-55 194
Msa0707890 MtrunA17_Chr3g0115711 27.953 508 308 13 1 474 6 489 2.04e-54 191
Msa0707890 MtrunA17_Chr3g0085971 28.306 484 304 11 16 471 20 488 5.91e-54 190
Msa0707890 MtrunA17_Chr3g0128081 27.168 519 327 13 2 484 8 511 7.47e-54 189
Msa0707890 MtrunA17_Chr3g0128171 28.640 419 280 7 59 471 37 442 3.07e-53 187
Msa0707890 MtrunA17_Chr4g0065324 26.923 494 317 10 3 470 14 489 3.73e-53 187
Msa0707890 MtrunA17_Chr1g0205681 27.495 491 309 10 13 473 18 491 4.06e-53 187
Msa0707890 MtrunA17_Chr3g0115741 27.071 495 317 9 19 481 27 509 5.15e-53 187
Msa0707890 MtrunA17_Chr8g0390141 29.060 468 288 11 31 471 39 489 8.52e-53 187
Msa0707890 MtrunA17_Chr5g0445601 28.340 494 307 11 3 467 9 484 7.59e-52 184
Msa0707890 MtrunA17_Chr1g0205671 28.866 485 296 11 13 467 18 483 1.38e-51 183
Msa0707890 MtrunA17_Chr1g0205691 28.463 527 318 12 3 486 7 517 4.86e-51 182
Msa0707890 MtrunA17_Chr2g0303731 35.965 342 200 7 15 348 23 353 5.19e-51 183
Msa0707890 MtrunA17_Chr2g0303731 35.043 117 71 2 381 493 463 578 8.06e-11 64.7
Msa0707890 MtrunA17_Chr7g0257631 27.677 495 311 11 6 471 46 522 5.81e-50 179
Msa0707890 MtrunA17_Chr3g0115751 27.824 478 306 10 19 471 29 492 8.52e-50 179
Msa0707890 MtrunA17_Chr3g0078791 27.896 423 266 8 59 475 29 418 1.39e-49 176
Msa0707890 MtrunA17_Chr8g0373181 28.908 467 297 10 12 468 41 482 9.00e-49 175
Msa0707890 MtrunA17_Chr1g0155221 28.571 462 294 10 21 471 52 488 1.02e-48 175
Msa0707890 MtrunA17_Chr4g0048051 27.530 494 321 11 3 471 8 489 1.26e-47 172
Msa0707890 MtrunA17_Chr8g0376631 35.474 327 202 5 15 338 23 343 9.39e-47 171
Msa0707890 MtrunA17_Chr8g0376631 31.707 123 80 1 370 492 451 569 3.56e-11 65.9
Msa0707890 MtrunA17_Chr1g0164871 28.513 491 298 14 13 471 18 487 1.90e-46 169
Msa0707890 MtrunA17_Chr1g0164851 28.717 491 297 14 13 471 18 487 2.90e-46 169
Msa0707890 MtrunA17_Chr4g0048411 29.048 420 276 9 83 496 108 511 6.00e-46 168
Msa0707890 MtrunA17_Chr2g0286721 28.085 470 308 7 3 468 37 480 6.36e-45 165
Msa0707890 MtrunA17_Chr4g0066581 29.938 481 289 15 1 468 38 483 1.21e-43 161
Msa0707890 MtrunA17_Chr2g0303701 33.636 330 203 5 15 339 23 341 3.65e-43 161
Msa0707890 MtrunA17_Chr5g0437021 26.190 504 313 14 2 471 9 487 5.79e-43 160
Msa0707890 MtrunA17_Chr8g0376601 33.333 330 211 5 13 339 21 344 8.69e-43 160
Msa0707890 MtrunA17_Chr7g0273281 27.119 472 308 9 17 485 64 502 9.15e-42 156
Msa0707890 MtrunA17_Chr3g0119401 28.043 460 289 11 23 468 98 529 2.98e-41 155
Msa0707890 MtrunA17_Chr7g0259471 26.625 477 312 13 5 469 21 471 3.47e-41 154
Msa0707890 MtrunA17_Chr2g0290181 32.059 340 215 6 17 348 26 357 1.56e-40 154
Msa0707890 MtrunA17_Chr2g0290181 37.778 90 56 0 382 471 467 556 1.58e-11 67.0
Msa0707890 MtrunA17_Chr8g0373191 28.330 473 272 15 17 473 38 459 1.28e-39 149
Msa0707890 MtrunA17_Chr4g0004821 28.986 483 308 12 2 475 20 476 3.73e-39 149
Msa0707890 MtrunA17_Chr8g0376611 34.657 277 171 4 68 342 12 280 4.51e-39 149
Msa0707890 MtrunA17_Chr3g0115731 26.061 495 292 12 3 467 12 462 9.44e-39 147
Msa0707890 MtrunA17_Chr6g0486021 29.130 460 295 10 16 468 48 483 6.63e-38 145
Msa0707890 MtrunA17_Chr7g0259221 25.630 476 318 11 5 469 23 473 2.73e-37 143
Msa0707890 MtrunA17_Chr4g0065351 27.807 374 240 9 136 493 1 360 2.19e-36 138
Msa0707890 MtrunA17_Chr3g0121674 29.085 306 206 3 179 480 1 299 5.54e-31 122
Msa0707890 MtrunA17_Chr5g0404191 32.314 229 144 4 19 246 51 269 2.26e-27 112
Msa0707890 MtrunA17_Chr2g0290161 28.472 288 157 6 76 353 21 269 7.71e-27 113
Msa0707890 MtrunA17_Chr5g0407441 29.756 205 140 4 19 220 5 208 3.87e-26 112
Msa0707890 MtrunA17_Chr5g0407441 26.786 224 143 6 254 465 489 703 9.11e-12 67.8
Msa0707890 MtrunA17_Chr3g0144261 29.557 203 141 2 19 220 5 206 7.39e-26 112
Msa0707890 MtrunA17_Chr3g0144261 30.894 246 145 6 253 484 496 730 1.04e-16 83.6
Msa0707890 MtrunA17_Chr8g0370141 31.884 207 133 4 16 217 2 205 1.40e-25 108
Msa0707890 MtrunA17_Chr5g0419321 30.978 184 123 3 40 220 54 236 5.32e-25 109
Msa0707890 MtrunA17_Chr5g0419321 27.234 235 140 5 254 471 515 735 3.95e-13 72.0
Msa0707890 MtrunA17_Chr3g0146061 34.000 200 118 6 29 220 15 208 1.16e-22 102
Msa0707890 MtrunA17_Chr3g0146061 27.477 222 144 6 254 465 507 721 4.71e-13 72.0
Msa0707890 MtrunA17_Chr5g0434231 33.333 180 93 3 55 234 2 154 1.17e-21 91.7
Msa0707890 MtrunA17_Chr7g0273261 28.077 260 163 6 229 483 9 249 1.65e-18 85.5
Msa0707890 MtrunA17_Chr7g0273271 25.248 202 143 2 3 204 13 206 1.38e-17 81.6
Msa0707890 MtrunA17_Chr5g0434251 35.484 93 60 0 381 473 49 141 1.94e-12 65.5
Msa0707890 MtrunA17_Chr5g0404181 35.922 103 59 2 369 468 30 128 4.82e-12 63.5
Msa0707890 MtrunA17_Chr1g0186831 23.958 384 242 12 115 464 133 500 8.81e-12 67.4
Msa0707890 MtrunA17_Chr4g0000061 23.108 502 315 16 16 476 27 498 1.08e-11 67.0
Msa0707890 MtrunA17_Chr3g0115771 23.197 319 181 13 128 439 7 268 1.14e-11 65.5
Msa0707890 MtrunA17_Chr8g0370151 26.772 254 170 5 227 471 102 348 1.22e-11 66.2
Msa0707890 MtrunA17_Chr5g0446681 23.039 204 138 3 3 205 7 192 2.41e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0707890 AT3G18830.1 51.417 494 228 4 15 496 33 526 1.68e-170 493
Msa0707890 AT4G36670.1 49.375 480 220 4 14 477 13 485 2.41e-169 488
Msa0707890 AT2G18480.1 50.964 467 221 3 13 471 17 483 1.00e-160 467
Msa0707890 AT2G16120.1 48.810 504 240 7 1 486 1 504 2.40e-160 466
Msa0707890 AT2G16130.1 47.826 506 244 8 1 486 1 506 1.07e-155 454
Msa0707890 AT2G20780.1 46.444 478 241 5 1 471 31 500 8.39e-154 450
Msa0707890 AT2G20780.2 44.989 449 237 5 47 495 26 464 1.99e-136 403
Msa0707890 AT5G17010.1 32.186 494 284 12 1 469 33 500 2.17e-62 213
Msa0707890 AT5G17010.3 32.186 494 284 12 1 469 33 500 2.17e-62 213
Msa0707890 AT5G17010.4 32.186 494 284 12 1 469 33 500 2.17e-62 213
Msa0707890 AT5G16150.2 32.957 443 277 8 28 468 115 539 3.10e-60 208
Msa0707890 AT5G16150.1 32.957 443 277 8 28 468 115 539 3.10e-60 208
Msa0707890 AT5G16150.3 32.957 443 277 8 28 468 115 539 3.10e-60 208
Msa0707890 AT2G43330.1 30.830 506 317 9 7 495 20 509 1.37e-59 205
Msa0707890 AT5G59250.1 31.635 471 279 12 23 469 103 554 6.87e-59 204
Msa0707890 AT3G03090.1 32.515 489 282 15 7 469 34 500 4.64e-58 201
Msa0707890 AT1G77210.2 28.974 497 308 13 13 477 21 504 5.71e-58 201
Msa0707890 AT1G77210.1 28.974 497 308 13 13 477 21 504 5.71e-58 201
Msa0707890 AT3G19930.1 28.599 514 321 12 8 488 13 513 2.04e-57 199
Msa0707890 AT3G19930.2 28.599 514 321 12 8 488 13 513 2.04e-57 199
Msa0707890 AT5G26340.1 27.477 535 322 12 3 494 10 521 2.16e-57 200
Msa0707890 AT3G19940.1 26.824 507 319 13 14 481 21 514 1.04e-56 197
Msa0707890 AT4G02050.2 28.221 489 313 10 6 471 15 488 1.05e-56 197
Msa0707890 AT4G02050.1 28.221 489 313 10 6 471 15 488 1.05e-56 197
Msa0707890 AT1G50310.1 26.819 481 310 11 14 467 21 486 4.15e-56 196
Msa0707890 AT5G23270.1 28.514 498 319 11 1 473 7 492 5.96e-56 196
Msa0707890 AT1G11260.1 27.132 516 325 11 13 489 18 521 1.24e-55 195
Msa0707890 AT1G75220.1 30.561 481 295 10 1 471 35 486 4.65e-51 182
Msa0707890 AT1G34580.1 27.869 488 308 12 9 467 15 487 8.95e-50 179
Msa0707890 AT5G26250.1 27.236 492 318 11 1 468 5 480 9.76e-49 176
Msa0707890 AT3G05150.2 30.000 480 299 11 1 472 20 470 2.28e-48 174
Msa0707890 AT3G05150.1 30.126 478 297 12 1 470 20 468 4.43e-48 173
Msa0707890 AT3G05150.3 30.126 478 297 12 1 470 20 468 4.43e-48 173
Msa0707890 AT1G34580.2 30.120 415 265 10 63 467 38 437 4.91e-48 173
Msa0707890 AT1G19450.1 29.854 479 294 13 7 471 37 487 8.56e-48 173
Msa0707890 AT4G21480.1 26.411 496 319 13 4 471 10 487 9.21e-48 173
Msa0707890 AT3G05160.1 27.557 479 299 9 2 469 11 452 8.96e-47 169
Msa0707890 AT5G27350.1 27.479 484 315 8 6 481 19 474 1.07e-46 170
Msa0707890 AT5G27360.1 27.778 486 311 9 6 481 23 478 2.83e-46 169
Msa0707890 AT3G05960.1 26.296 521 324 13 3 483 6 506 3.65e-46 169
Msa0707890 AT1G08930.1 25.322 466 326 7 6 470 46 490 4.75e-46 168
Msa0707890 AT1G08930.2 25.322 466 326 7 6 470 46 490 4.75e-46 168
Msa0707890 AT1G07340.1 27.801 482 303 11 13 467 18 481 9.58e-46 167
Msa0707890 AT5G27360.3 28.016 489 310 10 4 481 69 526 1.40e-45 167
Msa0707890 AT1G30220.1 33.531 337 215 5 15 348 25 355 2.45e-45 168
Msa0707890 AT1G30220.1 38.462 91 56 0 381 471 466 556 1.74e-13 73.6
Msa0707890 AT3G05165.3 26.556 482 300 10 2 469 20 461 1.10e-44 164
Msa0707890 AT3G05165.2 26.556 482 300 10 2 469 20 461 1.10e-44 164
Msa0707890 AT3G05165.1 26.556 482 300 10 2 469 20 461 1.10e-44 164
Msa0707890 AT1G77210.3 30.833 360 224 10 130 477 9 355 1.44e-44 161
Msa0707890 AT1G05030.1 28.850 461 295 11 25 476 86 522 3.78e-44 164
Msa0707890 AT1G54730.2 27.564 468 313 10 4 468 18 462 3.54e-43 160
Msa0707890 AT3G05160.3 27.945 433 270 8 48 469 2 403 6.07e-43 158
Msa0707890 AT3G05160.2 27.945 433 270 8 48 469 2 403 6.07e-43 158
Msa0707890 AT1G08900.1 27.731 476 311 10 4 473 12 460 2.14e-42 157
Msa0707890 AT1G08900.2 27.731 476 311 10 4 473 12 460 2.14e-42 157
Msa0707890 AT2G48020.2 27.044 477 308 9 1 470 17 460 2.25e-42 157
Msa0707890 AT2G48020.1 27.044 477 308 9 1 470 17 460 2.25e-42 157
Msa0707890 AT1G08900.3 27.521 476 304 11 4 473 12 452 2.75e-42 157
Msa0707890 AT5G61520.1 26.639 488 314 11 13 471 19 491 2.93e-42 158
Msa0707890 AT1G50310.2 29.769 346 221 9 129 467 13 343 3.17e-42 155
Msa0707890 AT2G35740.1 32.530 332 212 5 17 342 25 350 3.51e-42 159
Msa0707890 AT2G35740.1 36.667 90 57 0 382 471 470 559 2.12e-11 67.0
Msa0707890 AT3G05400.1 28.194 454 278 14 32 473 44 461 5.97e-42 156
Msa0707890 AT1G08900.5 27.955 440 285 9 40 473 5 418 1.03e-41 155
Msa0707890 AT3G05155.1 27.312 465 310 9 6 468 17 455 1.40e-41 155
Msa0707890 AT4G16480.2 32.931 331 212 5 17 342 26 351 1.14e-40 155
Msa0707890 AT4G16480.2 32.407 108 73 0 382 489 471 578 9.11e-12 68.2
Msa0707890 AT4G16480.3 32.931 331 212 5 17 342 26 351 1.14e-40 155
Msa0707890 AT4G16480.3 32.407 108 73 0 382 489 471 578 9.11e-12 68.2
Msa0707890 AT4G16480.1 32.931 331 212 5 17 342 26 351 1.14e-40 155
Msa0707890 AT4G16480.1 32.407 108 73 0 382 489 471 578 9.11e-12 68.2
Msa0707890 AT1G05030.2 28.846 416 265 10 68 476 79 470 2.06e-40 152
Msa0707890 AT5G61520.2 28.329 413 277 9 63 471 46 443 2.90e-40 152
Msa0707890 AT5G18840.1 28.125 480 294 12 7 468 29 475 6.61e-40 151
Msa0707890 AT1G79820.2 30.088 452 287 10 23 468 59 487 1.33e-39 150
Msa0707890 AT1G79820.1 30.088 452 287 10 23 468 59 487 1.33e-39 150
Msa0707890 AT1G08890.1 27.061 473 311 10 3 468 12 457 3.19e-39 149
Msa0707890 AT3G05165.4 27.014 422 255 9 2 409 20 402 1.22e-37 144
Msa0707890 AT3G05165.5 27.014 422 255 9 2 409 20 402 1.22e-37 144
Msa0707890 AT3G05165.6 27.014 422 255 9 2 409 20 402 1.97e-37 144
Msa0707890 AT5G17010.2 27.235 481 265 12 1 469 30 437 2.80e-37 143
Msa0707890 AT1G54730.3 26.824 425 286 9 4 425 18 420 5.12e-37 142
Msa0707890 AT4G04750.1 26.022 465 306 11 26 480 44 480 5.67e-37 143
Msa0707890 AT4G04750.2 26.022 465 306 11 26 480 44 480 5.67e-37 143
Msa0707890 AT1G67300.2 29.158 487 298 15 2 468 28 487 8.16e-37 142
Msa0707890 AT4G04750.3 26.022 465 306 11 26 480 88 524 9.36e-37 143
Msa0707890 AT3G05400.2 27.674 430 250 14 74 473 43 441 1.41e-36 141
Msa0707890 AT5G27360.2 28.283 396 244 9 96 481 9 374 1.51e-36 139
Msa0707890 AT5G27360.5 28.283 396 244 9 96 481 9 374 1.51e-36 139
Msa0707890 AT1G67300.1 28.866 485 301 15 2 468 28 486 4.42e-36 140
Msa0707890 AT1G67300.3 28.866 485 301 15 2 468 28 486 4.42e-36 140
Msa0707890 AT4G04760.1 27.310 487 295 16 15 480 28 476 4.56e-36 140
Msa0707890 AT4G04760.3 27.753 454 269 16 48 480 2 417 1.73e-35 137
Msa0707890 AT1G54730.5 25.536 466 304 10 4 468 18 441 3.00e-35 137
Msa0707890 AT1G79820.4 30.402 398 248 10 23 414 59 433 3.72e-34 134
Msa0707890 AT4G04760.2 26.598 485 298 16 15 480 28 473 4.57e-34 134
Msa0707890 AT1G08920.2 26.987 478 310 12 6 469 18 470 2.26e-33 132
Msa0707890 AT1G67300.6 28.571 427 269 14 2 414 28 432 7.50e-33 130
Msa0707890 AT1G67300.7 28.571 427 269 14 2 414 28 432 7.50e-33 130
Msa0707890 AT1G08900.4 27.103 428 280 9 4 425 12 413 1.29e-32 130
Msa0707890 AT1G08920.1 26.964 471 312 12 6 469 18 463 1.90e-32 130
Msa0707890 AT5G27360.4 26.747 415 263 9 4 407 21 405 6.14e-32 128
Msa0707890 AT1G67300.4 29.147 422 255 15 2 405 28 423 9.75e-32 127
Msa0707890 AT1G67300.5 29.147 422 255 15 2 405 28 423 9.75e-32 127
Msa0707890 AT1G54730.9 26.448 397 267 9 4 397 18 392 1.01e-31 127
Msa0707890 AT1G54730.7 26.448 397 267 9 4 397 18 392 1.01e-31 127
Msa0707890 AT3G20460.1 23.899 477 319 10 3 468 40 483 2.56e-29 121
Msa0707890 AT1G54730.4 24.823 423 276 9 4 425 18 399 2.87e-29 120
Msa0707890 AT3G05155.2 26.946 334 220 6 6 339 17 326 2.30e-28 115
Msa0707890 AT1G54730.11 25.893 336 230 6 4 339 18 334 4.43e-28 115
Msa0707890 AT3G51490.1 30.242 248 160 6 16 252 2 247 3.21e-27 116
Msa0707890 AT3G51490.1 27.234 235 147 7 243 471 496 712 5.66e-11 65.9
Msa0707890 AT3G51490.2 30.242 248 160 6 16 252 2 247 3.44e-27 116
Msa0707890 AT3G51490.2 28.333 240 146 7 243 471 496 720 1.06e-13 74.3
Msa0707890 AT2G48020.4 25.266 376 246 8 1 369 17 364 1.28e-26 112
Msa0707890 AT1G20840.2 32.353 204 132 3 20 220 6 206 1.34e-26 114
Msa0707890 AT1G20840.2 30.172 232 139 9 253 471 498 719 3.68e-11 66.2
Msa0707890 AT1G20840.1 32.353 204 132 3 20 220 6 206 1.34e-26 114
Msa0707890 AT1G20840.1 30.172 232 139 9 253 471 498 719 3.68e-11 66.2
Msa0707890 AT2G48020.3 24.571 350 239 6 1 350 17 341 1.43e-26 111
Msa0707890 AT1G08920.3 26.024 415 284 8 13 425 27 420 4.28e-26 111
Msa0707890 AT1G54730.10 25.305 328 225 7 4 331 18 325 1.55e-24 104
Msa0707890 AT1G54730.6 25.305 328 225 7 4 331 18 325 1.55e-24 104
Msa0707890 AT1G54730.8 24.557 395 256 9 4 397 18 371 4.78e-24 104
Msa0707890 AT4G35300.4 32.653 196 126 4 29 220 15 208 3.43e-23 104
Msa0707890 AT4G35300.4 27.193 228 151 4 253 471 505 726 1.28e-13 74.3
Msa0707890 AT4G35300.8 32.653 196 126 4 29 220 15 208 3.43e-23 104
Msa0707890 AT4G35300.8 27.193 228 151 4 253 471 505 726 1.28e-13 74.3
Msa0707890 AT4G35300.6 32.653 196 126 4 29 220 15 208 3.43e-23 104
Msa0707890 AT4G35300.6 27.193 228 151 4 253 471 505 726 1.28e-13 74.3
Msa0707890 AT4G35300.11 32.653 196 126 4 29 220 15 208 3.43e-23 104
Msa0707890 AT4G35300.11 27.193 228 151 4 253 471 505 726 1.28e-13 74.3
Msa0707890 AT4G35300.1 32.653 196 126 4 29 220 15 208 3.43e-23 104
Msa0707890 AT4G35300.1 27.193 228 151 4 253 471 505 726 1.28e-13 74.3
Msa0707890 AT4G35300.10 32.653 196 126 4 29 220 15 208 3.43e-23 104
Msa0707890 AT4G35300.10 27.193 228 151 4 253 471 505 726 1.28e-13 74.3
Msa0707890 AT4G35300.7 32.653 196 126 4 29 220 15 208 3.43e-23 104
Msa0707890 AT4G35300.7 27.193 228 151 4 253 471 505 726 1.28e-13 74.3
Msa0707890 AT4G35300.9 32.653 196 126 4 29 220 15 208 3.53e-23 103
Msa0707890 AT4G35300.9 27.193 228 151 4 253 471 495 716 1.06e-13 74.3
Msa0707890 AT4G35300.2 32.653 196 126 4 29 220 15 208 3.53e-23 103
Msa0707890 AT4G35300.2 27.193 228 151 4 253 471 495 716 1.06e-13 74.3
Msa0707890 AT4G35300.3 32.653 196 126 4 29 220 15 208 3.53e-23 103
Msa0707890 AT4G35300.3 27.193 228 151 4 253 471 495 716 1.06e-13 74.3
Msa0707890 AT3G51490.3 30.645 186 120 4 75 252 13 197 1.37e-22 102
Msa0707890 AT3G51490.3 28.333 240 146 7 243 471 446 670 1.23e-13 74.3
Msa0707890 AT1G79820.3 33.831 201 127 3 23 220 59 256 9.30e-21 95.5
Msa0707890 AT4G35300.5 27.193 228 151 4 253 471 308 529 1.47e-13 73.6

Find 120 sgRNAs with CRISPR-Local

Find 360 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCGATTTATTTGGATAAATT+TGG 0.096076 4_4:+81312632 Msa0707890:CDS
CTTTGTGTTGGCAGGAATTT+TGG 0.167779 4_4:+81312973 Msa0707890:CDS
CAGAGCATGCATGGTTTCTT+TGG 0.188254 4_4:+81311163 Msa0707890:five_prime_UTR
ATTCGGAGTTAATGTGATTA+TGG 0.219057 4_4:+81312577 Msa0707890:CDS
GCAGCAGCCACATTCTTAAT+TGG 0.236384 4_4:+81311930 Msa0707890:CDS
GAGAATCATGCTTGCGATTT+CGG 0.251888 4_4:+81312187 Msa0707890:CDS
CGACCCATGGGCCTGGAAAT+TGG 0.255935 4_4:+81312381 Msa0707890:CDS
AGCCTTAGTTCAGCTTCTTC+TGG 0.257644 4_4:-81312329 None:intergenic
TTGGGCTTGGGCCTATTACT+TGG 0.257763 4_4:+81312810 Msa0707890:CDS
AGAAATCAACATACGCTTAA+TGG 0.268855 4_4:-81312450 None:intergenic
AGGGTTCGGGGAAGCCTGTT+TGG 0.273220 4_4:+81312735 Msa0707890:CDS
ATTCTCCAACCAAGGTTTAT+AGG 0.276627 4_4:-81312170 None:intergenic
AACAAACGACCTATAATTTC+AGG 0.278138 4_4:+81311214 Msa0707890:five_prime_UTR
CGTATGTTGATTTCTGCTAT+TGG 0.288959 4_4:+81312458 Msa0707890:CDS
CGATTTATTTGGATAAATTT+GGG 0.299699 4_4:+81312633 Msa0707890:CDS
ATTTCGAAGAAGATAACTTT+TGG 0.302177 4_4:+81312941 Msa0707890:CDS
TTCCGGTGCTTGTAATCTAA+TGG 0.303488 4_4:+81313456 Msa0707890:CDS
TTCTTCTAATGTCTTGCCTT+TGG 0.309108 4_4:-81313035 None:intergenic
GTCGTTGTTTGGGCTTGGTT+TGG 0.311988 4_4:+81312697 Msa0707890:CDS
CCTTGACCATTCCAATTTCC+AGG 0.320701 4_4:-81312392 None:intergenic
TAACAATAGTAATGAGAAAC+AGG 0.322736 4_4:+81313096 Msa0707890:CDS
CACGATAAGGGTGTGGAAAA+AGG 0.325380 4_4:+81313124 Msa0707890:CDS
AATGTCTTGCCTTTGGTCTC+TGG 0.328319 4_4:-81313028 None:intergenic
TGTATGGCTGTGTCGTTGTT+TGG 0.329531 4_4:+81312686 Msa0707890:CDS
GTATGTTGATTTCTGCTATT+GGG 0.330958 4_4:+81312459 Msa0707890:CDS
TTCGGAGTTAATGTGATTAT+GGG 0.336573 4_4:+81312578 Msa0707890:CDS
CATGATTTCGCCTCTCTATA+CGG 0.336929 4_4:+81312037 Msa0707890:CDS
GTGATCAAACCTGAAATTAT+AGG 0.338776 4_4:-81311223 None:intergenic
ACAAGCCAATGAGGAGATTC+AGG 0.340207 4_4:-81312251 None:intergenic
ATTGGAATGGTCAAGGTGTT+TGG 0.342294 4_4:+81312399 Msa0707890:CDS
GGGTTCGGGGAAGCCTGTTT+GGG 0.343937 4_4:+81312736 Msa0707890:CDS
AGGCAAGACATTAGAAGAAA+TGG 0.351728 4_4:+81313039 Msa0707890:CDS
CATACGCTTAATGGGCTTGC+TGG 0.352250 4_4:-81312441 None:intergenic
AGAGGCTAGTGATCCGATTA+AGG 0.360619 4_4:-81311862 None:intergenic
GACGAATAAACCCAAGTAAT+AGG 0.376349 4_4:-81312821 None:intergenic
CTCAACGTGTGTTCCTTAAT+CGG 0.385617 4_4:+81311849 Msa0707890:CDS
ATCACTCTTGGAATTCTCAT+TGG 0.388963 4_4:+81312116 Msa0707890:CDS
AATTTCTTCATGCAAGCATC+TGG 0.394503 4_4:+81312485 Msa0707890:CDS
GTATGGCTGTGTCGTTGTTT+GGG 0.398304 4_4:+81312687 Msa0707890:CDS
GAAATCAACATACGCTTAAT+GGG 0.401834 4_4:-81312449 None:intergenic
TCGTTGTTTGGGCTTGGTTT+GGG 0.403167 4_4:+81312698 Msa0707890:CDS
GGAATGTTCTTTGTGTTGGC+AGG 0.406998 4_4:+81312965 Msa0707890:CDS
TGGGCTTGGGCCTATTACTT+GGG 0.410541 4_4:+81312811 Msa0707890:CDS
CCAAGAGTGATGAATACTTC+AGG 0.413010 4_4:-81312104 None:intergenic
ACGAATTCAACAAGAAATAC+TGG 0.415231 4_4:+81311818 Msa0707890:CDS
CCTTGAGCTCTAAGCCTCAT+AGG 0.421634 4_4:-81312854 None:intergenic
CCTGAAGTATTCATCACTCT+TGG 0.429913 4_4:+81312104 Msa0707890:CDS
TTATGCCTGAATCTCCTCAT+TGG 0.433079 4_4:+81312246 Msa0707890:CDS
GCTGTGTCGTTGTTTGGGCT+TGG 0.434203 4_4:+81312692 Msa0707890:CDS
CCCTCATATGACTCATGCTT+CGG 0.436869 4_4:+81313406 Msa0707890:CDS
AATGATTCGACCCATGGGCC+TGG 0.450651 4_4:+81312374 Msa0707890:CDS
GAGGAAACCACGTGTGGTGG+TGG 0.452634 4_4:-81312072 None:intergenic
TTCTACCAGTTAAGATGAAA+AGG 0.454141 4_4:-81311983 None:intergenic
GGAAACCACGTGTGGTGGTG+GGG 0.460413 4_4:-81312070 None:intergenic
ACCGAAGCATGAGTCATATG+AGG 0.463108 4_4:-81313407 None:intergenic
AAGTGAAAGAAGAACACGTT+TGG 0.463421 4_4:-81312297 None:intergenic
GTATTGCAATTTCAGTGAAT+CGG 0.469528 4_4:+81312882 Msa0707890:CDS
TTAACTGGTAGAATGATTGC+CGG 0.471849 4_4:+81311993 Msa0707890:CDS
TTTAAAGCTGCTGGGATTCA+CGG 0.473398 4_4:+81312542 Msa0707890:CDS
GGCAAAACCTCCGACACAAT+CGG 0.474469 4_4:+81311885 Msa0707890:CDS
CACACCACAACAGCCCAAAC+AGG 0.478548 4_4:-81312749 None:intergenic
ATCTTCCTATAAACCTTGGT+TGG 0.480684 4_4:+81312165 Msa0707890:CDS
GTGACCGTAGCCGAGGAGAA+TGG 0.490976 4_4:-81311622 None:intergenic
TGCATAACCAACGCCAATGC+CGG 0.491265 4_4:-81312012 None:intergenic
CATTCCAATTTCCAGGCCCA+TGG 0.493226 4_4:-81312385 None:intergenic
GAAACAGGGTAGTCACGATA+AGG 0.493974 4_4:+81313111 Msa0707890:CDS
GAAACCACGTGTGGTGGTGG+GGG 0.497288 4_4:-81312069 None:intergenic
GGTAGAATGATTGCCGGCAT+TGG 0.499470 4_4:+81311999 Msa0707890:CDS
TATTACTTGGGTTTATTCGT+CGG 0.500169 4_4:+81312823 Msa0707890:CDS
CCTATGAGGCTTAGAGCTCA+AGG 0.502005 4_4:+81312854 Msa0707890:CDS
GAAGCCTGTTTGGGCTGTTG+TGG 0.508508 4_4:+81312745 Msa0707890:CDS
TATACAAACATAAAAGAAAC+CGG 0.508891 4_4:-81313005 None:intergenic
ATACGCTTAATGGGCTTGCT+GGG 0.514483 4_4:-81312440 None:intergenic
AACGACCCAATCAACAAAAG+AGG 0.515727 4_4:-81312662 None:intergenic
CTCCAGAAGAAGCTGAACTA+AGG 0.515892 4_4:+81312327 Msa0707890:CDS
AGGAAACCACGTGTGGTGGT+GGG 0.518887 4_4:-81312071 None:intergenic
AACCATTAGATTACAAGCAC+CGG 0.519177 4_4:-81313458 None:intergenic
TCAGTGAATCGGTTGGTAAG+TGG 0.520141 4_4:+81312893 Msa0707890:CDS
CCGTGGTTGCAGAGCATGCA+TGG 0.523667 4_4:+81311154 Msa0707890:five_prime_UTR
ATGATTGCCGGCATTGGCGT+TGG 0.525057 4_4:+81312005 Msa0707890:CDS
TGCAATTTCAGTGAATCGGT+TGG 0.526155 4_4:+81312886 Msa0707890:CDS
CCATGCATGCTCTGCAACCA+CGG 0.526360 4_4:-81311154 None:intergenic
AAACAGGGTAGTCACGATAA+GGG 0.529928 4_4:+81313112 Msa0707890:CDS
AACTCCATTCTCCTCGGCTA+CGG 0.533061 4_4:+81311618 Msa0707890:CDS
ACAGATCTTCCTATAAACCT+TGG 0.534847 4_4:+81312161 Msa0707890:CDS
TTCCGGTGAGTAATATATAA+CGG 0.540717 4_4:-81312516 None:intergenic
CCAAAAGCAATTAAAATCGC+AGG 0.554301 4_4:-81312215 None:intergenic
CAAGCATGATTCTCCAACCA+AGG 0.566441 4_4:-81312178 None:intergenic
ATTCCAATTTCCAGGCCCAT+GGG 0.576951 4_4:-81312384 None:intergenic
TTAATCGGATCACTAGCCTC+TGG 0.576984 4_4:+81311864 Msa0707890:CDS
ATTTGGATAAATTTGGGAGG+CGG 0.578238 4_4:+81312639 Msa0707890:CDS
GCAGATATTGGAGTTATGAG+TGG 0.580027 4_4:+81311759 Msa0707890:intron
CCTTTGAAAACAAGCCAATG+AGG 0.580197 4_4:-81312260 None:intergenic
ATGCTCTGCAACCACGGTCA+AGG 0.580764 4_4:-81311148 None:intergenic
GCGTCGTCCGATTGTGTCGG+AGG 0.585672 4_4:-81311892 None:intergenic
GGCTGTTGTGGTGTGCATTG+TGG 0.586509 4_4:+81312757 Msa0707890:CDS
CATGGGCCTGGAAATTGGAA+TGG 0.589396 4_4:+81312386 Msa0707890:CDS
GATAGCTCCAATTAAGAATG+TGG 0.593155 4_4:-81311937 None:intergenic
GTAGCCGAGGAGAATGGAGT+TGG 0.596763 4_4:-81311616 None:intergenic
GGGTAGTCACGATAAGGGTG+TGG 0.598862 4_4:+81313117 Msa0707890:CDS
ACCAGTTAAGATGAAAAGGA+AGG 0.603097 4_4:-81311979 None:intergenic
TCAACCAACTCCATTCTCCT+CGG 0.608495 4_4:+81311612 Msa0707890:CDS
AGTGTGAGTGACCGTAGCCG+AGG 0.610877 4_4:-81311629 None:intergenic
TGCCGTTATATATTACTCAC+CGG 0.612747 4_4:+81312514 Msa0707890:CDS
CCTGGAAATTGGAATGGTCA+AGG 0.618100 4_4:+81312392 Msa0707890:CDS
GAGAGTTCTGCCGTATAGAG+AGG 0.619005 4_4:-81312047 None:intergenic
ATTCAACAAGAAATACTGGT+AGG 0.623074 4_4:+81311822 Msa0707890:CDS
CCGAAGCATGAGTCATATGA+GGG 0.626889 4_4:-81313406 None:intergenic
GTATCTGTTGATGCGAATTG+AGG 0.627690 4_4:-81311565 None:intergenic
CGATTAAGGAACACACGTTG+AGG 0.637851 4_4:-81311848 None:intergenic
GTAGCGTCGTCCGATTGTGT+CGG 0.643886 4_4:-81311895 None:intergenic
TTTATTTGGATAAATTTGGG+AGG 0.646571 4_4:+81312636 Msa0707890:CDS
ATACTTCAGGAAGCGAAGTG+AGG 0.648850 4_4:-81312091 None:intergenic
GTTTGTATACCAGAGACCAA+AGG 0.651583 4_4:+81313019 Msa0707890:CDS
AGTGAGGAAACCACGTGTGG+TGG 0.676857 4_4:-81312075 None:intergenic
CGAAGTGAGGAAACCACGTG+TGG 0.678253 4_4:-81312078 None:intergenic
AATGGAAACTCTCTTCGTCG+AGG 0.684483 4_4:+81313057 Msa0707890:CDS
GAATCGGTTGGTAAGTGGAG+TGG 0.690356 4_4:+81312898 Msa0707890:CDS
AACAATAGTAATGAGAAACA+GGG 0.691089 4_4:+81313097 Msa0707890:CDS
TTGACGAGAAAAGAGCACAG+AGG 0.775973 4_4:-81311593 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTGTTTATATTAGTAAAG+TGG + chr4_4:81311304-81311323 Msa0707890:intron 15.0%
!!! ACCATCATAAATTATTTTAT+AGG + chr4_4:81313368-81313387 Msa0707890:intron 15.0%
!! ACCTATAAAATAATTTATGA+TGG - chr4_4:81313372-81313391 None:intergenic 15.0%
!!! TTTTGTTTATATTAGTAAAG+TGG + chr4_4:81311304-81311323 Msa0707890:intron 15.0%
!!! ACCATCATAAATTATTTTAT+AGG + chr4_4:81313368-81313387 Msa0707890:intron 15.0%
!! ACCTATAAAATAATTTATGA+TGG - chr4_4:81313372-81313391 None:intergenic 15.0%
!! TCAACTTATTGAATTTAACA+AGG + chr4_4:81311380-81311399 Msa0707890:intron 20.0%
!! ATTTATGAACATTAATAAGC+TGG - chr4_4:81311436-81311455 None:intergenic 20.0%
!! AAAGTCATAAATAGAAAGAT+GGG - chr4_4:81311705-81311724 None:intergenic 20.0%
!!! GAGTTTTTTTGTTTTTCTTT+CGG + chr4_4:81312610-81312629 Msa0707890:CDS 20.0%
!! CGATTTATTTGGATAAATTT+GGG + chr4_4:81312633-81312652 Msa0707890:CDS 20.0%
!! TATACAAACATAAAAGAAAC+CGG - chr4_4:81313008-81313027 None:intergenic 20.0%
!! TCAACTTATTGAATTTAACA+AGG + chr4_4:81311380-81311399 Msa0707890:intron 20.0%
!! ATTTATGAACATTAATAAGC+TGG - chr4_4:81311436-81311455 None:intergenic 20.0%
!! AAAGTCATAAATAGAAAGAT+GGG - chr4_4:81311705-81311724 None:intergenic 20.0%
!!! GAGTTTTTTTGTTTTTCTTT+CGG + chr4_4:81312610-81312629 Msa0707890:CDS 20.0%
!! CGATTTATTTGGATAAATTT+GGG + chr4_4:81312633-81312652 Msa0707890:CDS 20.0%
!! TATACAAACATAAAAGAAAC+CGG - chr4_4:81313008-81313027 None:intergenic 20.0%
! ACTTATTGAATTTAACAAGG+AGG + chr4_4:81311383-81311402 Msa0707890:intron 25.0%
! CAAAGTCATAAATAGAAAGA+TGG - chr4_4:81311706-81311725 None:intergenic 25.0%
! TTATAATGCATTGCAGATAT+TGG + chr4_4:81311747-81311766 Msa0707890:intron 25.0%
!!! TTTGGAAAGAGCTTTTTTTA+AGG + chr4_4:81312417-81312436 Msa0707890:CDS 25.0%
! GCGATTTATTTGGATAAATT+TGG + chr4_4:81312632-81312651 Msa0707890:CDS 25.0%
! TTTATTTGGATAAATTTGGG+AGG + chr4_4:81312636-81312655 Msa0707890:CDS 25.0%
!! ATGTTTCGTTCTTTTCTATT+GGG + chr4_4:81312792-81312811 Msa0707890:CDS 25.0%
!! ATTTCGAAGAAGATAACTTT+TGG + chr4_4:81312941-81312960 Msa0707890:CDS 25.0%
!! TTTCGAAGAAGATAACTTTT+GGG + chr4_4:81312942-81312961 Msa0707890:CDS 25.0%
! TAACAATAGTAATGAGAAAC+AGG + chr4_4:81313096-81313115 Msa0707890:CDS 25.0%
! AACAATAGTAATGAGAAACA+GGG + chr4_4:81313097-81313116 Msa0707890:CDS 25.0%
!!! TCTACATCGTTTTTTTTTTC+CGG + chr4_4:81313439-81313458 Msa0707890:CDS 25.0%
! ACTTATTGAATTTAACAAGG+AGG + chr4_4:81311383-81311402 Msa0707890:intron 25.0%
! CAAAGTCATAAATAGAAAGA+TGG - chr4_4:81311706-81311725 None:intergenic 25.0%
! TTATAATGCATTGCAGATAT+TGG + chr4_4:81311747-81311766 Msa0707890:intron 25.0%
!!! TTTGGAAAGAGCTTTTTTTA+AGG + chr4_4:81312417-81312436 Msa0707890:CDS 25.0%
! GCGATTTATTTGGATAAATT+TGG + chr4_4:81312632-81312651 Msa0707890:CDS 25.0%
! TTTATTTGGATAAATTTGGG+AGG + chr4_4:81312636-81312655 Msa0707890:CDS 25.0%
!! ATGTTTCGTTCTTTTCTATT+GGG + chr4_4:81312792-81312811 Msa0707890:CDS 25.0%
!! ATTTCGAAGAAGATAACTTT+TGG + chr4_4:81312941-81312960 Msa0707890:CDS 25.0%
!! TTTCGAAGAAGATAACTTTT+GGG + chr4_4:81312942-81312961 Msa0707890:CDS 25.0%
! TAACAATAGTAATGAGAAAC+AGG + chr4_4:81313096-81313115 Msa0707890:CDS 25.0%
! AACAATAGTAATGAGAAACA+GGG + chr4_4:81313097-81313116 Msa0707890:CDS 25.0%
!!! TCTACATCGTTTTTTTTTTC+CGG + chr4_4:81313439-81313458 Msa0707890:CDS 25.0%
AACAAACGACCTATAATTTC+AGG + chr4_4:81311214-81311233 Msa0707890:five_prime_UTR 30.0%
GTGATCAAACCTGAAATTAT+AGG - chr4_4:81311226-81311245 None:intergenic 30.0%
ACGAATTCAACAAGAAATAC+TGG + chr4_4:81311818-81311837 Msa0707890:CDS 30.0%
ATTCAACAAGAAATACTGGT+AGG + chr4_4:81311822-81311841 Msa0707890:CDS 30.0%
TTCTACCAGTTAAGATGAAA+AGG - chr4_4:81311986-81312005 None:intergenic 30.0%
GAAATCAACATACGCTTAAT+GGG - chr4_4:81312452-81312471 None:intergenic 30.0%
AGAAATCAACATACGCTTAA+TGG - chr4_4:81312453-81312472 None:intergenic 30.0%
!! GTATGTTGATTTCTGCTATT+GGG + chr4_4:81312459-81312478 Msa0707890:CDS 30.0%
TTCCGGTGAGTAATATATAA+CGG - chr4_4:81312519-81312538 None:intergenic 30.0%
ATTCGGAGTTAATGTGATTA+TGG + chr4_4:81312577-81312596 Msa0707890:CDS 30.0%
TTCGGAGTTAATGTGATTAT+GGG + chr4_4:81312578-81312597 Msa0707890:CDS 30.0%
! TTTTCTTTCGGCGATTTATT+TGG + chr4_4:81312622-81312641 Msa0707890:CDS 30.0%
! GATGTTTCGTTCTTTTCTAT+TGG + chr4_4:81312791-81312810 Msa0707890:CDS 30.0%
TATTACTTGGGTTTATTCGT+CGG + chr4_4:81312823-81312842 Msa0707890:CDS 30.0%
GTATTGCAATTTCAGTGAAT+CGG + chr4_4:81312882-81312901 Msa0707890:CDS 30.0%
! TTCGAAGAAGATAACTTTTG+GGG + chr4_4:81312943-81312962 Msa0707890:CDS 30.0%
TTCAATCCACAAATACAGTT+TGG - chr4_4:81313288-81313307 None:intergenic 30.0%
AAACTACCAATGTTATGAGA+AGG + chr4_4:81313329-81313348 Msa0707890:intron 30.0%
AACAAACGACCTATAATTTC+AGG + chr4_4:81311214-81311233 Msa0707890:five_prime_UTR 30.0%
GTGATCAAACCTGAAATTAT+AGG - chr4_4:81311226-81311245 None:intergenic 30.0%
ACGAATTCAACAAGAAATAC+TGG + chr4_4:81311818-81311837 Msa0707890:CDS 30.0%
ATTCAACAAGAAATACTGGT+AGG + chr4_4:81311822-81311841 Msa0707890:CDS 30.0%
TTCTACCAGTTAAGATGAAA+AGG - chr4_4:81311986-81312005 None:intergenic 30.0%
GAAATCAACATACGCTTAAT+GGG - chr4_4:81312452-81312471 None:intergenic 30.0%
AGAAATCAACATACGCTTAA+TGG - chr4_4:81312453-81312472 None:intergenic 30.0%
!! GTATGTTGATTTCTGCTATT+GGG + chr4_4:81312459-81312478 Msa0707890:CDS 30.0%
TTCCGGTGAGTAATATATAA+CGG - chr4_4:81312519-81312538 None:intergenic 30.0%
ATTCGGAGTTAATGTGATTA+TGG + chr4_4:81312577-81312596 Msa0707890:CDS 30.0%
TTCGGAGTTAATGTGATTAT+GGG + chr4_4:81312578-81312597 Msa0707890:CDS 30.0%
! TTTTCTTTCGGCGATTTATT+TGG + chr4_4:81312622-81312641 Msa0707890:CDS 30.0%
! GATGTTTCGTTCTTTTCTAT+TGG + chr4_4:81312791-81312810 Msa0707890:CDS 30.0%
TATTACTTGGGTTTATTCGT+CGG + chr4_4:81312823-81312842 Msa0707890:CDS 30.0%
GTATTGCAATTTCAGTGAAT+CGG + chr4_4:81312882-81312901 Msa0707890:CDS 30.0%
! TTCGAAGAAGATAACTTTTG+GGG + chr4_4:81312943-81312962 Msa0707890:CDS 30.0%
TTCAATCCACAAATACAGTT+TGG - chr4_4:81313288-81313307 None:intergenic 30.0%
AAACTACCAATGTTATGAGA+AGG + chr4_4:81313329-81313348 Msa0707890:intron 30.0%
! TGAGATACAGTTACTGGTTA+TGG - chr4_4:81311347-81311366 None:intergenic 35.0%
GATAGCTCCAATTAAGAATG+TGG - chr4_4:81311940-81311959 None:intergenic 35.0%
! TCCTTCCTTTTCATCTTAAC+TGG + chr4_4:81311978-81311997 Msa0707890:CDS 35.0%
ACCAGTTAAGATGAAAAGGA+AGG - chr4_4:81311982-81312001 None:intergenic 35.0%
TTAACTGGTAGAATGATTGC+CGG + chr4_4:81311993-81312012 Msa0707890:CDS 35.0%
ATCACTCTTGGAATTCTCAT+TGG + chr4_4:81312116-81312135 Msa0707890:CDS 35.0%
ACAGATCTTCCTATAAACCT+TGG + chr4_4:81312161-81312180 Msa0707890:CDS 35.0%
ATCTTCCTATAAACCTTGGT+TGG + chr4_4:81312165-81312184 Msa0707890:CDS 35.0%
ATTCTCCAACCAAGGTTTAT+AGG - chr4_4:81312173-81312192 None:intergenic 35.0%
CCAAAAGCAATTAAAATCGC+AGG - chr4_4:81312218-81312237 None:intergenic 35.0%
!!! CCTGCGATTTTAATTGCTTT+TGG + chr4_4:81312215-81312234 Msa0707890:CDS 35.0%
AAGTGAAAGAAGAACACGTT+TGG - chr4_4:81312300-81312319 None:intergenic 35.0%
AACAAAAATGATTCGACCCA+TGG + chr4_4:81312368-81312387 Msa0707890:CDS 35.0%
ACAAAAATGATTCGACCCAT+GGG + chr4_4:81312369-81312388 Msa0707890:CDS 35.0%
!! CGTATGTTGATTTCTGCTAT+TGG + chr4_4:81312458-81312477 Msa0707890:CDS 35.0%
AATTTCTTCATGCAAGCATC+TGG + chr4_4:81312485-81312504 Msa0707890:CDS 35.0%
TGCCGTTATATATTACTCAC+CGG + chr4_4:81312514-81312533 Msa0707890:CDS 35.0%
CACGGTAAGAAAAAGCTATT+CGG + chr4_4:81312560-81312579 Msa0707890:CDS 35.0%
ATTTGGATAAATTTGGGAGG+CGG + chr4_4:81312639-81312658 Msa0707890:CDS 35.0%
TTTGGGCTCAAAAATTCTAG+AGG + chr4_4:81312715-81312734 Msa0707890:CDS 35.0%
TTGGGCTCAAAAATTCTAGA+GGG + chr4_4:81312716-81312735 Msa0707890:CDS 35.0%
! CTCAAAAATTCTAGAGGGTT+CGG + chr4_4:81312721-81312740 Msa0707890:CDS 35.0%
! TCAAAAATTCTAGAGGGTTC+GGG + chr4_4:81312722-81312741 Msa0707890:CDS 35.0%
GACGAATAAACCCAAGTAAT+AGG - chr4_4:81312824-81312843 None:intergenic 35.0%
! TCGAAGAAGATAACTTTTGG+GGG + chr4_4:81312944-81312963 Msa0707890:CDS 35.0%
TTCTTCTAATGTCTTGCCTT+TGG - chr4_4:81313038-81313057 None:intergenic 35.0%
AGGCAAGACATTAGAAGAAA+TGG + chr4_4:81313039-81313058 Msa0707890:CDS 35.0%
TTTAGGGGAAGAAAATGTGT+TGG + chr4_4:81313152-81313171 Msa0707890:intron 35.0%
! TGAGATACAGTTACTGGTTA+TGG - chr4_4:81311347-81311366 None:intergenic 35.0%
GATAGCTCCAATTAAGAATG+TGG - chr4_4:81311940-81311959 None:intergenic 35.0%
! TCCTTCCTTTTCATCTTAAC+TGG + chr4_4:81311978-81311997 Msa0707890:CDS 35.0%
ACCAGTTAAGATGAAAAGGA+AGG - chr4_4:81311982-81312001 None:intergenic 35.0%
TTAACTGGTAGAATGATTGC+CGG + chr4_4:81311993-81312012 Msa0707890:CDS 35.0%
ATCACTCTTGGAATTCTCAT+TGG + chr4_4:81312116-81312135 Msa0707890:CDS 35.0%
ACAGATCTTCCTATAAACCT+TGG + chr4_4:81312161-81312180 Msa0707890:CDS 35.0%
ATCTTCCTATAAACCTTGGT+TGG + chr4_4:81312165-81312184 Msa0707890:CDS 35.0%
ATTCTCCAACCAAGGTTTAT+AGG - chr4_4:81312173-81312192 None:intergenic 35.0%
CCAAAAGCAATTAAAATCGC+AGG - chr4_4:81312218-81312237 None:intergenic 35.0%
!!! CCTGCGATTTTAATTGCTTT+TGG + chr4_4:81312215-81312234 Msa0707890:CDS 35.0%
AAGTGAAAGAAGAACACGTT+TGG - chr4_4:81312300-81312319 None:intergenic 35.0%
AACAAAAATGATTCGACCCA+TGG + chr4_4:81312368-81312387 Msa0707890:CDS 35.0%
ACAAAAATGATTCGACCCAT+GGG + chr4_4:81312369-81312388 Msa0707890:CDS 35.0%
!! CGTATGTTGATTTCTGCTAT+TGG + chr4_4:81312458-81312477 Msa0707890:CDS 35.0%
AATTTCTTCATGCAAGCATC+TGG + chr4_4:81312485-81312504 Msa0707890:CDS 35.0%
TGCCGTTATATATTACTCAC+CGG + chr4_4:81312514-81312533 Msa0707890:CDS 35.0%
CACGGTAAGAAAAAGCTATT+CGG + chr4_4:81312560-81312579 Msa0707890:CDS 35.0%
ATTTGGATAAATTTGGGAGG+CGG + chr4_4:81312639-81312658 Msa0707890:CDS 35.0%
TTTGGGCTCAAAAATTCTAG+AGG + chr4_4:81312715-81312734 Msa0707890:CDS 35.0%
TTGGGCTCAAAAATTCTAGA+GGG + chr4_4:81312716-81312735 Msa0707890:CDS 35.0%
! CTCAAAAATTCTAGAGGGTT+CGG + chr4_4:81312721-81312740 Msa0707890:CDS 35.0%
! TCAAAAATTCTAGAGGGTTC+GGG + chr4_4:81312722-81312741 Msa0707890:CDS 35.0%
GACGAATAAACCCAAGTAAT+AGG - chr4_4:81312824-81312843 None:intergenic 35.0%
! TCGAAGAAGATAACTTTTGG+GGG + chr4_4:81312944-81312963 Msa0707890:CDS 35.0%
TTCTTCTAATGTCTTGCCTT+TGG - chr4_4:81313038-81313057 None:intergenic 35.0%
AGGCAAGACATTAGAAGAAA+TGG + chr4_4:81313039-81313058 Msa0707890:CDS 35.0%
TTTAGGGGAAGAAAATGTGT+TGG + chr4_4:81313152-81313171 Msa0707890:intron 35.0%
GACTTGTGAGATACAGTTAC+TGG - chr4_4:81311353-81311372 None:intergenic 40.0%
TTCGACCACTCTATCTTCTT+TGG + chr4_4:81311407-81311426 Msa0707890:intron 40.0%
GGATTCCAAAGAAGATAGAG+TGG - chr4_4:81311415-81311434 None:intergenic 40.0%
GTATCTGTTGATGCGAATTG+AGG - chr4_4:81311568-81311587 None:intergenic 40.0%
GCAGATATTGGAGTTATGAG+TGG + chr4_4:81311759-81311778 Msa0707890:intron 40.0%
CTCAACGTGTGTTCCTTAAT+CGG + chr4_4:81311849-81311868 Msa0707890:CDS 40.0%
CATGATTTCGCCTCTCTATA+CGG + chr4_4:81312037-81312056 Msa0707890:CDS 40.0%
CCAAGAGTGATGAATACTTC+AGG - chr4_4:81312107-81312126 None:intergenic 40.0%
! CCTGAAGTATTCATCACTCT+TGG + chr4_4:81312104-81312123 Msa0707890:CDS 40.0%
GAGAATCATGCTTGCGATTT+CGG + chr4_4:81312187-81312206 Msa0707890:CDS 40.0%
TTATGCCTGAATCTCCTCAT+TGG + chr4_4:81312246-81312265 Msa0707890:CDS 40.0%
! CCTTTGAAAACAAGCCAATG+AGG - chr4_4:81312263-81312282 None:intergenic 40.0%
!!! CCTCATTGGCTTGTTTTCAA+AGG + chr4_4:81312260-81312279 Msa0707890:CDS 40.0%
! ATTGGAATGGTCAAGGTGTT+TGG + chr4_4:81312399-81312418 Msa0707890:CDS 40.0%
!! CCAGCAGCTTTAAAAACTTC+CGG - chr4_4:81312536-81312555 None:intergenic 40.0%
!!! CGGAAGTTTTTAAAGCTGCT+GGG + chr4_4:81312534-81312553 Msa0707890:CDS 40.0%
! TTTAAAGCTGCTGGGATTCA+CGG + chr4_4:81312542-81312561 Msa0707890:CDS 40.0%
AACGACCCAATCAACAAAAG+AGG - chr4_4:81312665-81312684 None:intergenic 40.0%
!! GTTGATTGGGTCGTTTTGTA+TGG + chr4_4:81312670-81312689 Msa0707890:CDS 40.0%
! CAAAAATTCTAGAGGGTTCG+GGG + chr4_4:81312723-81312742 Msa0707890:CDS 40.0%
! TCGTTCTTTTCTATTGGGCT+TGG + chr4_4:81312797-81312816 Msa0707890:CDS 40.0%
! CGTTCTTTTCTATTGGGCTT+GGG + chr4_4:81312798-81312817 Msa0707890:CDS 40.0%
TGCAATTTCAGTGAATCGGT+TGG + chr4_4:81312886-81312905 Msa0707890:CDS 40.0%
!! CTTTGTGTTGGCAGGAATTT+TGG + chr4_4:81312973-81312992 Msa0707890:CDS 40.0%
GTTTGTATACCAGAGACCAA+AGG + chr4_4:81313019-81313038 Msa0707890:CDS 40.0%
AAACAGGGTAGTCACGATAA+GGG + chr4_4:81313112-81313131 Msa0707890:CDS 40.0%
!! TGTGGAAAAAGGAGGTGTTT+AGG + chr4_4:81313135-81313154 Msa0707890:intron 40.0%
!! GTGGAAAAAGGAGGTGTTTA+GGG + chr4_4:81313136-81313155 Msa0707890:intron 40.0%
!! TGGAAAAAGGAGGTGTTTAG+GGG + chr4_4:81313137-81313156 Msa0707890:intron 40.0%
GCTAGACCAAACTGTATTTG+TGG + chr4_4:81313279-81313298 Msa0707890:intron 40.0%
CTACCAATGTTATGAGAAGG+TGG + chr4_4:81313332-81313351 Msa0707890:intron 40.0%
ATGCCACCTTCTCATAACAT+TGG - chr4_4:81313338-81313357 None:intergenic 40.0%
GACTTGTGAGATACAGTTAC+TGG - chr4_4:81311353-81311372 None:intergenic 40.0%
TTCGACCACTCTATCTTCTT+TGG + chr4_4:81311407-81311426 Msa0707890:intron 40.0%
GGATTCCAAAGAAGATAGAG+TGG - chr4_4:81311415-81311434 None:intergenic 40.0%
GTATCTGTTGATGCGAATTG+AGG - chr4_4:81311568-81311587 None:intergenic 40.0%
GCAGATATTGGAGTTATGAG+TGG + chr4_4:81311759-81311778 Msa0707890:intron 40.0%
CTCAACGTGTGTTCCTTAAT+CGG + chr4_4:81311849-81311868 Msa0707890:CDS 40.0%
CATGATTTCGCCTCTCTATA+CGG + chr4_4:81312037-81312056 Msa0707890:CDS 40.0%
CCAAGAGTGATGAATACTTC+AGG - chr4_4:81312107-81312126 None:intergenic 40.0%
! CCTGAAGTATTCATCACTCT+TGG + chr4_4:81312104-81312123 Msa0707890:CDS 40.0%
GAGAATCATGCTTGCGATTT+CGG + chr4_4:81312187-81312206 Msa0707890:CDS 40.0%
TTATGCCTGAATCTCCTCAT+TGG + chr4_4:81312246-81312265 Msa0707890:CDS 40.0%
! CCTTTGAAAACAAGCCAATG+AGG - chr4_4:81312263-81312282 None:intergenic 40.0%
!!! CCTCATTGGCTTGTTTTCAA+AGG + chr4_4:81312260-81312279 Msa0707890:CDS 40.0%
! ATTGGAATGGTCAAGGTGTT+TGG + chr4_4:81312399-81312418 Msa0707890:CDS 40.0%
!! CCAGCAGCTTTAAAAACTTC+CGG - chr4_4:81312536-81312555 None:intergenic 40.0%
!!! CGGAAGTTTTTAAAGCTGCT+GGG + chr4_4:81312534-81312553 Msa0707890:CDS 40.0%
! TTTAAAGCTGCTGGGATTCA+CGG + chr4_4:81312542-81312561 Msa0707890:CDS 40.0%
AACGACCCAATCAACAAAAG+AGG - chr4_4:81312665-81312684 None:intergenic 40.0%
!! GTTGATTGGGTCGTTTTGTA+TGG + chr4_4:81312670-81312689 Msa0707890:CDS 40.0%
! CAAAAATTCTAGAGGGTTCG+GGG + chr4_4:81312723-81312742 Msa0707890:CDS 40.0%
! TCGTTCTTTTCTATTGGGCT+TGG + chr4_4:81312797-81312816 Msa0707890:CDS 40.0%
! CGTTCTTTTCTATTGGGCTT+GGG + chr4_4:81312798-81312817 Msa0707890:CDS 40.0%
TGCAATTTCAGTGAATCGGT+TGG + chr4_4:81312886-81312905 Msa0707890:CDS 40.0%
!! CTTTGTGTTGGCAGGAATTT+TGG + chr4_4:81312973-81312992 Msa0707890:CDS 40.0%
GTTTGTATACCAGAGACCAA+AGG + chr4_4:81313019-81313038 Msa0707890:CDS 40.0%
AAACAGGGTAGTCACGATAA+GGG + chr4_4:81313112-81313131 Msa0707890:CDS 40.0%
!! TGTGGAAAAAGGAGGTGTTT+AGG + chr4_4:81313135-81313154 Msa0707890:intron 40.0%
!! GTGGAAAAAGGAGGTGTTTA+GGG + chr4_4:81313136-81313155 Msa0707890:intron 40.0%
!! TGGAAAAAGGAGGTGTTTAG+GGG + chr4_4:81313137-81313156 Msa0707890:intron 40.0%
GCTAGACCAAACTGTATTTG+TGG + chr4_4:81313279-81313298 Msa0707890:intron 40.0%
CTACCAATGTTATGAGAAGG+TGG + chr4_4:81313332-81313351 Msa0707890:intron 40.0%
ATGCCACCTTCTCATAACAT+TGG - chr4_4:81313338-81313357 None:intergenic 40.0%
CAGAGCATGCATGGTTTCTT+TGG + chr4_4:81311163-81311182 Msa0707890:five_prime_UTR 45.0%
TCTCCTCAGTGACGCAAAAA+TGG + chr4_4:81311518-81311537 Msa0707890:exon 45.0%
!! AGTCCATTTTTGCGTCACTG+AGG - chr4_4:81311524-81311543 None:intergenic 45.0%
! GACGCAAAAATGGACTCCAA+CGG + chr4_4:81311528-81311547 Msa0707890:exon 45.0%
! GGCATTTTCTTCTTTGCCGT+TGG - chr4_4:81311547-81311566 None:intergenic 45.0%
! TTGACGAGAAAAGAGCACAG+AGG - chr4_4:81311596-81311615 None:intergenic 45.0%
TCAACCAACTCCATTCTCCT+CGG + chr4_4:81311612-81311631 Msa0707890:CDS 45.0%
CGATTAAGGAACACACGTTG+AGG - chr4_4:81311851-81311870 None:intergenic 45.0%
AGAGGCTAGTGATCCGATTA+AGG - chr4_4:81311865-81311884 None:intergenic 45.0%
! TTAATCGGATCACTAGCCTC+TGG + chr4_4:81311864-81311883 Msa0707890:CDS 45.0%
GCAGCAGCCACATTCTTAAT+TGG + chr4_4:81311930-81311949 Msa0707890:CDS 45.0%
ATACTTCAGGAAGCGAAGTG+AGG - chr4_4:81312094-81312113 None:intergenic 45.0%
CAAGCATGATTCTCCAACCA+AGG - chr4_4:81312181-81312200 None:intergenic 45.0%
ACAAGCCAATGAGGAGATTC+AGG - chr4_4:81312254-81312273 None:intergenic 45.0%
CTCCAGAAGAAGCTGAACTA+AGG + chr4_4:81312327-81312346 Msa0707890:CDS 45.0%
AGCCTTAGTTCAGCTTCTTC+TGG - chr4_4:81312332-81312351 None:intergenic 45.0%
ATTCCAATTTCCAGGCCCAT+GGG - chr4_4:81312387-81312406 None:intergenic 45.0%
CCTTGACCATTCCAATTTCC+AGG - chr4_4:81312395-81312414 None:intergenic 45.0%
CCTGGAAATTGGAATGGTCA+AGG + chr4_4:81312392-81312411 Msa0707890:CDS 45.0%
!! ATACGCTTAATGGGCTTGCT+GGG - chr4_4:81312443-81312462 None:intergenic 45.0%
!!! CCGGAAGTTTTTAAAGCTGC+TGG + chr4_4:81312533-81312552 Msa0707890:CDS 45.0%
! TGTATGGCTGTGTCGTTGTT+TGG + chr4_4:81312686-81312705 Msa0707890:CDS 45.0%
! GTATGGCTGTGTCGTTGTTT+GGG + chr4_4:81312687-81312706 Msa0707890:CDS 45.0%
! TCGTTGTTTGGGCTTGGTTT+GGG + chr4_4:81312698-81312717 Msa0707890:CDS 45.0%
! CGTCGGAGATTTTTCCTATG+AGG + chr4_4:81312840-81312859 Msa0707890:CDS 45.0%
!! TCAGTGAATCGGTTGGTAAG+TGG + chr4_4:81312893-81312912 Msa0707890:CDS 45.0%
TGGGGGAATGTTCTTTGTGT+TGG + chr4_4:81312961-81312980 Msa0707890:CDS 45.0%
! GGAATGTTCTTTGTGTTGGC+AGG + chr4_4:81312965-81312984 Msa0707890:CDS 45.0%
!! TGTGTTGGCAGGAATTTTGG+TGG + chr4_4:81312976-81312995 Msa0707890:CDS 45.0%
AATGTCTTGCCTTTGGTCTC+TGG - chr4_4:81313031-81313050 None:intergenic 45.0%
AATGGAAACTCTCTTCGTCG+AGG + chr4_4:81313057-81313076 Msa0707890:CDS 45.0%
GAAACAGGGTAGTCACGATA+AGG + chr4_4:81313111-81313130 Msa0707890:CDS 45.0%
! CACGATAAGGGTGTGGAAAA+AGG + chr4_4:81313124-81313143 Msa0707890:CDS 45.0%
! GATAAGGGTGTGGAAAAAGG+AGG + chr4_4:81313127-81313146 Msa0707890:CDS 45.0%
CCGAAGCATGAGTCATATGA+GGG - chr4_4:81313409-81313428 None:intergenic 45.0%
CCCTCATATGACTCATGCTT+CGG + chr4_4:81313406-81313425 Msa0707890:CDS 45.0%
ACCGAAGCATGAGTCATATG+AGG - chr4_4:81313410-81313429 None:intergenic 45.0%
CAGAGCATGCATGGTTTCTT+TGG + chr4_4:81311163-81311182 Msa0707890:five_prime_UTR 45.0%
TCTCCTCAGTGACGCAAAAA+TGG + chr4_4:81311518-81311537 Msa0707890:exon 45.0%
!! AGTCCATTTTTGCGTCACTG+AGG - chr4_4:81311524-81311543 None:intergenic 45.0%
! GACGCAAAAATGGACTCCAA+CGG + chr4_4:81311528-81311547 Msa0707890:exon 45.0%
! GGCATTTTCTTCTTTGCCGT+TGG - chr4_4:81311547-81311566 None:intergenic 45.0%
! TTGACGAGAAAAGAGCACAG+AGG - chr4_4:81311596-81311615 None:intergenic 45.0%
TCAACCAACTCCATTCTCCT+CGG + chr4_4:81311612-81311631 Msa0707890:CDS 45.0%
CGATTAAGGAACACACGTTG+AGG - chr4_4:81311851-81311870 None:intergenic 45.0%
AGAGGCTAGTGATCCGATTA+AGG - chr4_4:81311865-81311884 None:intergenic 45.0%
! TTAATCGGATCACTAGCCTC+TGG + chr4_4:81311864-81311883 Msa0707890:CDS 45.0%
GCAGCAGCCACATTCTTAAT+TGG + chr4_4:81311930-81311949 Msa0707890:CDS 45.0%
ATACTTCAGGAAGCGAAGTG+AGG - chr4_4:81312094-81312113 None:intergenic 45.0%
CAAGCATGATTCTCCAACCA+AGG - chr4_4:81312181-81312200 None:intergenic 45.0%
ACAAGCCAATGAGGAGATTC+AGG - chr4_4:81312254-81312273 None:intergenic 45.0%
CTCCAGAAGAAGCTGAACTA+AGG + chr4_4:81312327-81312346 Msa0707890:CDS 45.0%
AGCCTTAGTTCAGCTTCTTC+TGG - chr4_4:81312332-81312351 None:intergenic 45.0%
ATTCCAATTTCCAGGCCCAT+GGG - chr4_4:81312387-81312406 None:intergenic 45.0%
CCTTGACCATTCCAATTTCC+AGG - chr4_4:81312395-81312414 None:intergenic 45.0%
CCTGGAAATTGGAATGGTCA+AGG + chr4_4:81312392-81312411 Msa0707890:CDS 45.0%
!! ATACGCTTAATGGGCTTGCT+GGG - chr4_4:81312443-81312462 None:intergenic 45.0%
!!! CCGGAAGTTTTTAAAGCTGC+TGG + chr4_4:81312533-81312552 Msa0707890:CDS 45.0%
! TGTATGGCTGTGTCGTTGTT+TGG + chr4_4:81312686-81312705 Msa0707890:CDS 45.0%
! GTATGGCTGTGTCGTTGTTT+GGG + chr4_4:81312687-81312706 Msa0707890:CDS 45.0%
! TCGTTGTTTGGGCTTGGTTT+GGG + chr4_4:81312698-81312717 Msa0707890:CDS 45.0%
! CGTCGGAGATTTTTCCTATG+AGG + chr4_4:81312840-81312859 Msa0707890:CDS 45.0%
!! TCAGTGAATCGGTTGGTAAG+TGG + chr4_4:81312893-81312912 Msa0707890:CDS 45.0%
TGGGGGAATGTTCTTTGTGT+TGG + chr4_4:81312961-81312980 Msa0707890:CDS 45.0%
! GGAATGTTCTTTGTGTTGGC+AGG + chr4_4:81312965-81312984 Msa0707890:CDS 45.0%
!! TGTGTTGGCAGGAATTTTGG+TGG + chr4_4:81312976-81312995 Msa0707890:CDS 45.0%
AATGTCTTGCCTTTGGTCTC+TGG - chr4_4:81313031-81313050 None:intergenic 45.0%
AATGGAAACTCTCTTCGTCG+AGG + chr4_4:81313057-81313076 Msa0707890:CDS 45.0%
GAAACAGGGTAGTCACGATA+AGG + chr4_4:81313111-81313130 Msa0707890:CDS 45.0%
! CACGATAAGGGTGTGGAAAA+AGG + chr4_4:81313124-81313143 Msa0707890:CDS 45.0%
! GATAAGGGTGTGGAAAAAGG+AGG + chr4_4:81313127-81313146 Msa0707890:CDS 45.0%
CCGAAGCATGAGTCATATGA+GGG - chr4_4:81313409-81313428 None:intergenic 45.0%
CCCTCATATGACTCATGCTT+CGG + chr4_4:81313406-81313425 Msa0707890:CDS 45.0%
ACCGAAGCATGAGTCATATG+AGG - chr4_4:81313410-81313429 None:intergenic 45.0%
AACTCCATTCTCCTCGGCTA+CGG + chr4_4:81311618-81311637 Msa0707890:CDS 50.0%
GGCAAAACCTCCGACACAAT+CGG + chr4_4:81311885-81311904 Msa0707890:CDS 50.0%
GGTAGAATGATTGCCGGCAT+TGG + chr4_4:81311999-81312018 Msa0707890:CDS 50.0%
TGCATAACCAACGCCAATGC+CGG - chr4_4:81312015-81312034 None:intergenic 50.0%
GAGAGTTCTGCCGTATAGAG+AGG - chr4_4:81312050-81312069 None:intergenic 50.0%
CATTCCAATTTCCAGGCCCA+TGG - chr4_4:81312388-81312407 None:intergenic 50.0%
CATGGGCCTGGAAATTGGAA+TGG + chr4_4:81312386-81312405 Msa0707890:CDS 50.0%
!! CATACGCTTAATGGGCTTGC+TGG - chr4_4:81312444-81312463 None:intergenic 50.0%
! AGGCGGCCTCTTTTGTTGAT+TGG + chr4_4:81312656-81312675 Msa0707890:CDS 50.0%
!! GGCGGCCTCTTTTGTTGATT+GGG + chr4_4:81312657-81312676 Msa0707890:CDS 50.0%
! GTCGTTGTTTGGGCTTGGTT+TGG + chr4_4:81312697-81312716 Msa0707890:CDS 50.0%
TTGGGCTTGGGCCTATTACT+TGG + chr4_4:81312810-81312829 Msa0707890:CDS 50.0%
TGGGCTTGGGCCTATTACTT+GGG + chr4_4:81312811-81312830 Msa0707890:CDS 50.0%
!! CCTTGAGCTCTAAGCCTCAT+AGG - chr4_4:81312857-81312876 None:intergenic 50.0%
CCTATGAGGCTTAGAGCTCA+AGG + chr4_4:81312854-81312873 Msa0707890:CDS 50.0%
!! GAATCGGTTGGTAAGTGGAG+TGG + chr4_4:81312898-81312917 Msa0707890:CDS 50.0%
!! GTTGGCAGGAATTTTGGTGG+TGG + chr4_4:81312979-81312998 Msa0707890:CDS 50.0%
!!! GGAATTTTGGTGGTGGCTAC+CGG + chr4_4:81312986-81313005 Msa0707890:CDS 50.0%
AACTCCATTCTCCTCGGCTA+CGG + chr4_4:81311618-81311637 Msa0707890:CDS 50.0%
GGCAAAACCTCCGACACAAT+CGG + chr4_4:81311885-81311904 Msa0707890:CDS 50.0%
GGTAGAATGATTGCCGGCAT+TGG + chr4_4:81311999-81312018 Msa0707890:CDS 50.0%
TGCATAACCAACGCCAATGC+CGG - chr4_4:81312015-81312034 None:intergenic 50.0%
GAGAGTTCTGCCGTATAGAG+AGG - chr4_4:81312050-81312069 None:intergenic 50.0%
CATTCCAATTTCCAGGCCCA+TGG - chr4_4:81312388-81312407 None:intergenic 50.0%
CATGGGCCTGGAAATTGGAA+TGG + chr4_4:81312386-81312405 Msa0707890:CDS 50.0%
!! CATACGCTTAATGGGCTTGC+TGG - chr4_4:81312444-81312463 None:intergenic 50.0%
! AGGCGGCCTCTTTTGTTGAT+TGG + chr4_4:81312656-81312675 Msa0707890:CDS 50.0%
!! GGCGGCCTCTTTTGTTGATT+GGG + chr4_4:81312657-81312676 Msa0707890:CDS 50.0%
! GTCGTTGTTTGGGCTTGGTT+TGG + chr4_4:81312697-81312716 Msa0707890:CDS 50.0%
TTGGGCTTGGGCCTATTACT+TGG + chr4_4:81312810-81312829 Msa0707890:CDS 50.0%
TGGGCTTGGGCCTATTACTT+GGG + chr4_4:81312811-81312830 Msa0707890:CDS 50.0%
!! CCTTGAGCTCTAAGCCTCAT+AGG - chr4_4:81312857-81312876 None:intergenic 50.0%
CCTATGAGGCTTAGAGCTCA+AGG + chr4_4:81312854-81312873 Msa0707890:CDS 50.0%
!! GAATCGGTTGGTAAGTGGAG+TGG + chr4_4:81312898-81312917 Msa0707890:CDS 50.0%
!! GTTGGCAGGAATTTTGGTGG+TGG + chr4_4:81312979-81312998 Msa0707890:CDS 50.0%
!!! GGAATTTTGGTGGTGGCTAC+CGG + chr4_4:81312986-81313005 Msa0707890:CDS 50.0%
ATGCTCTGCAACCACGGTCA+AGG - chr4_4:81311151-81311170 None:intergenic 55.0%
CCATGCATGCTCTGCAACCA+CGG - chr4_4:81311157-81311176 None:intergenic 55.0%
GTAGCCGAGGAGAATGGAGT+TGG - chr4_4:81311619-81311638 None:intergenic 55.0%
! TGTGTCGGAGGTTTTGCCAG+AGG - chr4_4:81311883-81311902 None:intergenic 55.0%
GTAGCGTCGTCCGATTGTGT+CGG - chr4_4:81311898-81311917 None:intergenic 55.0%
!! ATGATTGCCGGCATTGGCGT+TGG + chr4_4:81312005-81312024 Msa0707890:CDS 55.0%
AGGAAACCACGTGTGGTGGT+GGG - chr4_4:81312074-81312093 None:intergenic 55.0%
AGTGAGGAAACCACGTGTGG+TGG - chr4_4:81312078-81312097 None:intergenic 55.0%
CGAAGTGAGGAAACCACGTG+TGG - chr4_4:81312081-81312100 None:intergenic 55.0%
AATGATTCGACCCATGGGCC+TGG + chr4_4:81312374-81312393 Msa0707890:CDS 55.0%
! GCTGTGTCGTTGTTTGGGCT+TGG + chr4_4:81312692-81312711 Msa0707890:CDS 55.0%
GAAGCCTGTTTGGGCTGTTG+TGG + chr4_4:81312745-81312764 Msa0707890:CDS 55.0%
CACACCACAACAGCCCAAAC+AGG - chr4_4:81312752-81312771 None:intergenic 55.0%
GGCTGTTGTGGTGTGCATTG+TGG + chr4_4:81312757-81312776 Msa0707890:CDS 55.0%
GGGTAGTCACGATAAGGGTG+TGG + chr4_4:81313117-81313136 Msa0707890:CDS 55.0%
ATGCTCTGCAACCACGGTCA+AGG - chr4_4:81311151-81311170 None:intergenic 55.0%
CCATGCATGCTCTGCAACCA+CGG - chr4_4:81311157-81311176 None:intergenic 55.0%
GTAGCCGAGGAGAATGGAGT+TGG - chr4_4:81311619-81311638 None:intergenic 55.0%
! TGTGTCGGAGGTTTTGCCAG+AGG - chr4_4:81311883-81311902 None:intergenic 55.0%
GTAGCGTCGTCCGATTGTGT+CGG - chr4_4:81311898-81311917 None:intergenic 55.0%
!! ATGATTGCCGGCATTGGCGT+TGG + chr4_4:81312005-81312024 Msa0707890:CDS 55.0%
AGGAAACCACGTGTGGTGGT+GGG - chr4_4:81312074-81312093 None:intergenic 55.0%
AGTGAGGAAACCACGTGTGG+TGG - chr4_4:81312078-81312097 None:intergenic 55.0%
CGAAGTGAGGAAACCACGTG+TGG - chr4_4:81312081-81312100 None:intergenic 55.0%
AATGATTCGACCCATGGGCC+TGG + chr4_4:81312374-81312393 Msa0707890:CDS 55.0%
! GCTGTGTCGTTGTTTGGGCT+TGG + chr4_4:81312692-81312711 Msa0707890:CDS 55.0%
GAAGCCTGTTTGGGCTGTTG+TGG + chr4_4:81312745-81312764 Msa0707890:CDS 55.0%
CACACCACAACAGCCCAAAC+AGG - chr4_4:81312752-81312771 None:intergenic 55.0%
GGCTGTTGTGGTGTGCATTG+TGG + chr4_4:81312757-81312776 Msa0707890:CDS 55.0%
GGGTAGTCACGATAAGGGTG+TGG + chr4_4:81313117-81313136 Msa0707890:CDS 55.0%
CCGTGGTTGCAGAGCATGCA+TGG + chr4_4:81311154-81311173 Msa0707890:five_prime_UTR 60.0%
GTGACCGTAGCCGAGGAGAA+TGG - chr4_4:81311625-81311644 None:intergenic 60.0%
AGTGTGAGTGACCGTAGCCG+AGG - chr4_4:81311632-81311651 None:intergenic 60.0%
!! GAAACCACGTGTGGTGGTGG+GGG - chr4_4:81312072-81312091 None:intergenic 60.0%
! GGAAACCACGTGTGGTGGTG+GGG - chr4_4:81312073-81312092 None:intergenic 60.0%
GAGGAAACCACGTGTGGTGG+TGG - chr4_4:81312075-81312094 None:intergenic 60.0%
CGACCCATGGGCCTGGAAAT+TGG + chr4_4:81312381-81312400 Msa0707890:CDS 60.0%
AGGGTTCGGGGAAGCCTGTT+TGG + chr4_4:81312735-81312754 Msa0707890:CDS 60.0%
GGGTTCGGGGAAGCCTGTTT+GGG + chr4_4:81312736-81312755 Msa0707890:CDS 60.0%
CCGTGGTTGCAGAGCATGCA+TGG + chr4_4:81311154-81311173 Msa0707890:five_prime_UTR 60.0%
GTGACCGTAGCCGAGGAGAA+TGG - chr4_4:81311625-81311644 None:intergenic 60.0%
AGTGTGAGTGACCGTAGCCG+AGG - chr4_4:81311632-81311651 None:intergenic 60.0%
!! GAAACCACGTGTGGTGGTGG+GGG - chr4_4:81312072-81312091 None:intergenic 60.0%
! GGAAACCACGTGTGGTGGTG+GGG - chr4_4:81312073-81312092 None:intergenic 60.0%
GAGGAAACCACGTGTGGTGG+TGG - chr4_4:81312075-81312094 None:intergenic 60.0%
CGACCCATGGGCCTGGAAAT+TGG + chr4_4:81312381-81312400 Msa0707890:CDS 60.0%
AGGGTTCGGGGAAGCCTGTT+TGG + chr4_4:81312735-81312754 Msa0707890:CDS 60.0%
GGGTTCGGGGAAGCCTGTTT+GGG + chr4_4:81312736-81312755 Msa0707890:CDS 60.0%
GCGTCGTCCGATTGTGTCGG+AGG - chr4_4:81311895-81311914 None:intergenic 65.0%
GCGTCGTCCGATTGTGTCGG+AGG - chr4_4:81311895-81311914 None:intergenic 65.0%
CTCTCCCCCACCACCACACG+TGG + chr4_4:81312065-81312084 Msa0707890:CDS 70.0%
CTCTCCCCCACCACCACACG+TGG + chr4_4:81312065-81312084 Msa0707890:CDS 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 81311142 81313475 81311142 ID=Msa0707890;Name=Msa0707890
chr4_4 mRNA 81311142 81313475 81311142 ID=Msa0707890-mRNA-1;Parent=Msa0707890;Name=Msa0707890-mRNA-1;_AED=0.04;_eAED=0.04;_QI=119|0.66|0.5|1|0.33|0.25|4|0|524
chr4_4 exon 81311142 81311235 81311142 ID=Msa0707890-mRNA-1:exon:26599;Parent=Msa0707890-mRNA-1
chr4_4 exon 81311512 81311639 81311512 ID=Msa0707890-mRNA-1:exon:26600;Parent=Msa0707890-mRNA-1
chr4_4 exon 81311763 81313148 81311763 ID=Msa0707890-mRNA-1:exon:26601;Parent=Msa0707890-mRNA-1
chr4_4 exon 81313390 81313475 81313390 ID=Msa0707890-mRNA-1:exon:26602;Parent=Msa0707890-mRNA-1
chr4_4 five_prime_UTR 81311142 81311235 81311142 ID=Msa0707890-mRNA-1:five_prime_utr;Parent=Msa0707890-mRNA-1
chr4_4 five_prime_UTR 81311512 81311536 81311512 ID=Msa0707890-mRNA-1:five_prime_utr;Parent=Msa0707890-mRNA-1
chr4_4 CDS 81311537 81311639 81311537 ID=Msa0707890-mRNA-1:cds;Parent=Msa0707890-mRNA-1
chr4_4 CDS 81311763 81313148 81311763 ID=Msa0707890-mRNA-1:cds;Parent=Msa0707890-mRNA-1
chr4_4 CDS 81313390 81313475 81313390 ID=Msa0707890-mRNA-1:cds;Parent=Msa0707890-mRNA-1
Gene Sequence

>Msa0707890

ATGGACTCCAACGGCAAAGAAGAAAATGCCTCAATTCGCATCAACAGATACACACTCCTCTGTGCTCTTTTCTCGTCAACCAACTCCATTCTCCTCGGCTACGATATTGGAGTTATGAGTGGAGCAAGCATGTTGATAAAAGAAAATCTAAAAATCTCACGAATTCAACAAGAAATACTGGTAGGCAGCCTCAACGTGTGTTCCTTAATCGGATCACTAGCCTCTGGCAAAACCTCCGACACAATCGGACGACGCTACACAATCGTCTTAGCAGCAGCCACATTCTTAATTGGAGCTATCTTCATGTCACTTGCACATTCCTTCCTTTTCATCTTAACTGGTAGAATGATTGCCGGCATTGGCGTTGGTTATGCACTCATGATTTCGCCTCTCTATACGGCAGAACTCTCCCCCACCACCACACGTGGTTTCCTCACTTCGCTTCCTGAAGTATTCATCACTCTTGGAATTCTCATTGGTTATGTTATCAACTACGCTTTAACAGATCTTCCTATAAACCTTGGTTGGAGAATCATGCTTGCGATTTCGGCTCTACCTGCGATTTTAATTGCTTTTGGTGTTATTTTTATGCCTGAATCTCCTCATTGGCTTGTTTTCAAAGGAAGAGTTTCTGAAGCCAAACGTGTTCTTCTTTCACTTTCAACTACTCCAGAAGAAGCTGAACTAAGGCTTCAAGAAATAGTAACAAACAAAAATGATTCGACCCATGGGCCTGGAAATTGGAATGGTCAAGGTGTTTGGAAAGAGCTTTTTTTAAGGCCCAGCAAGCCCATTAAGCGTATGTTGATTTCTGCTATTGGGATTAATTTCTTCATGCAAGCATCTGGAAACGATGCCGTTATATATTACTCACCGGAAGTTTTTAAAGCTGCTGGGATTCACGGTAAGAAAAAGCTATTCGGAGTTAATGTGATTATGGGCTTGTCAAAGAGTTTTTTTGTTTTTCTTTCGGCGATTTATTTGGATAAATTTGGGAGGCGGCCTCTTTTGTTGATTGGGTCGTTTTGTATGGCTGTGTCGTTGTTTGGGCTTGGTTTGGGCTCAAAAATTCTAGAGGGTTCGGGGAAGCCTGTTTGGGCTGTTGTGGTGTGCATTGTGGCTGTTTGCGCTGATGTTTCGTTCTTTTCTATTGGGCTTGGGCCTATTACTTGGGTTTATTCGTCGGAGATTTTTCCTATGAGGCTTAGAGCTCAAGGTTCGAGTATTGCAATTTCAGTGAATCGGTTGGTAAGTGGAGTGGTGTCTATGACGTTCTTGAGCATTTCGAAGAAGATAACTTTTGGGGGAATGTTCTTTGTGTTGGCAGGAATTTTGGTGGTGGCTACCGGTTTCTTTTATGTTTGTATACCAGAGACCAAAGGCAAGACATTAGAAGAAATGGAAACTCTCTTCGTCGAGGATGATGATGATAATAATAACAATAGTAATGAGAAACAGGGTAGTCACGATAAGGGTGTGGAAAAAGGAGGTCTCATTGCAGTTCGCCCTCATATGACTCATGCTTCGGTGCTTGTAGATCTACATCGTTTTTTTTTTCCGGTGCTTGTAATCTAA
Protein sequence

>Msa0707890

MDSNGKEENASIRINRYTLLCALFSSTNSILLGYDIGVMSGASMLIKENLKISRIQQEILVGSLNVCSLIGSLASGKTSDTIGRRYTIVLAAATFLIGAIFMSLAHSFLFILTGRMIAGIGVGYALMISPLYTAELSPTTTRGFLTSLPEVFITLGILIGYVINYALTDLPINLGWRIMLAISALPAILIAFGVIFMPESPHWLVFKGRVSEAKRVLLSLSTTPEEAELRLQEIVTNKNDSTHGPGNWNGQGVWKELFLRPSKPIKRMLISAIGINFFMQASGNDAVIYYSPEVFKAAGIHGKKKLFGVNVIMGLSKSFFVFLSAIYLDKFGRRPLLLIGSFCMAVSLFGLGLGSKILEGSGKPVWAVVVCIVAVCADVSFFSIGLGPITWVYSSEIFPMRLRAQGSSIAISVNRLVSGVVSMTFLSISKKITFGGMFFVLAGILVVATGFFYVCIPETKGKTLEEMETLFVEDDDDNNNNSNEKQGSHDKGVEKGGLIAVRPHMTHASVLVDLHRFFFPVLVI*