AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0553520

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0553520 MtrunA17_Chr4g0039251 98.701 693 9 0 1 693 41 733 0.0 1414
Msa0553520 MtrunA17_Chr4g0039231 81.048 649 72 2 94 692 1 648 0.0 1071
Msa0553520 MtrunA17_Chr4g0039261 65.945 693 231 3 1 692 1 689 0.0 968
Msa0553520 MtrunA17_Chr6g0477811 58.529 639 262 3 33 671 47 682 0.0 759
Msa0553520 MtrunA17_Chr4g0050251 47.500 640 313 6 30 659 50 676 0.0 594
Msa0553520 MtrunA17_Chr4g0050261 45.604 671 323 7 30 659 50 719 0.0 594
Msa0553520 MtrunA17_Chr4g0050291 46.749 646 320 8 26 659 21 654 0.0 590
Msa0553520 MtrunA17_Chr4g0050221 44.462 623 324 8 26 643 6 611 0.0 536
Msa0553520 MtrunA17_Chr4g0026731 43.947 603 286 9 86 654 12 596 1.53e-171 504
Msa0553520 MtrunA17_Chr4g0050201 41.906 556 297 9 95 643 4 540 2.42e-148 442
Msa0553520 MtrunA17_Chr2g0327241 38.499 613 354 12 30 635 104 700 6.45e-128 395
Msa0553520 MtrunA17_Chr1g0208391 29.646 678 414 16 35 690 75 711 6.86e-79 266
Msa0553520 MtrunA17_Chr1g0176451 30.820 610 374 13 39 636 9 582 5.46e-78 260
Msa0553520 MtrunA17_Chr1g0213091 32.270 533 343 5 50 567 119 648 3.91e-75 257
Msa0553520 MtrunA17_Chr1g0176441 29.843 573 372 12 32 590 148 704 4.87e-71 245
Msa0553520 MtrunA17_Chr1g0200651 34.821 448 270 10 53 493 90 522 6.77e-71 243
Msa0553520 MtrunA17_Chr1g0198931 30.198 606 371 18 50 636 104 676 3.61e-70 241
Msa0553520 MtrunA17_Chr3g0102731 40.179 336 187 5 52 384 97 421 1.67e-69 238
Msa0553520 MtrunA17_Chr5g0408061 30.693 606 367 16 51 636 63 635 4.61e-69 238
Msa0553520 MtrunA17_Chr8g0384391 30.248 605 393 11 46 638 49 636 2.64e-68 236
Msa0553520 MtrunA17_Chr7g0263351 30.672 551 348 9 50 586 124 654 5.19e-68 237
Msa0553520 MtrunA17_Chr2g0316301 31.029 622 358 18 36 635 55 627 5.92e-68 234
Msa0553520 MtrunA17_Chr7g0267971 28.732 623 395 15 32 637 137 727 1.70e-67 235
Msa0553520 MtrunA17_Chr3g0130331 28.900 609 390 14 48 638 53 636 4.45e-64 224
Msa0553520 MtrunA17_Chr8g0359931 29.133 611 365 18 47 635 60 624 5.20e-64 224
Msa0553520 MtrunA17_Chr5g0446901 39.701 335 184 5 51 378 107 430 5.49e-64 223
Msa0553520 MtrunA17_Chr2g0318061 37.330 367 191 9 51 407 29 366 2.53e-63 215
Msa0553520 MtrunA17_Chr1g0202431 29.533 535 335 10 49 579 46 542 6.44e-62 218
Msa0553520 MtrunA17_Chr2g0331081 29.204 565 347 14 52 597 890 1420 9.77e-57 209
Msa0553520 MtrunA17_Chr2g0331081 26.543 648 392 19 45 637 167 785 1.57e-45 175
Msa0553520 MtrunA17_Chr2g0332241 29.616 547 324 16 53 573 856 1367 2.96e-55 205
Msa0553520 MtrunA17_Chr2g0332241 27.768 587 344 22 49 582 159 718 2.84e-44 171
Msa0553520 MtrunA17_Chr2g0332221 29.433 547 325 16 53 573 855 1366 1.80e-54 202
Msa0553520 MtrunA17_Chr2g0332221 27.226 584 351 18 49 582 159 718 1.30e-43 169
Msa0553520 MtrunA17_Chr7g0264441 30.323 465 273 9 47 475 273 722 4.42e-54 199
Msa0553520 MtrunA17_Chr4g0065231 26.431 594 398 12 53 638 75 637 2.05e-53 194
Msa0553520 MtrunA17_Chr4g0003981 28.885 547 328 17 53 573 866 1377 2.50e-53 199
Msa0553520 MtrunA17_Chr4g0003981 25.674 631 399 16 53 637 173 779 3.67e-44 171
Msa0553520 MtrunA17_Chr2g0332211 29.803 557 310 20 53 573 939 1450 2.68e-53 199
Msa0553520 MtrunA17_Chr2g0332211 27.211 588 347 20 49 585 240 797 1.54e-43 169
Msa0553520 MtrunA17_Chr7g0262261 29.005 593 356 16 20 574 756 1321 1.79e-52 196
Msa0553520 MtrunA17_Chr7g0262261 26.412 602 374 15 53 613 133 706 4.02e-45 174
Msa0553520 MtrunA17_Chr7g0265991 25.352 639 406 15 37 640 42 644 2.50e-52 191
Msa0553520 MtrunA17_Chr1g0199471 41.245 257 143 4 33 286 501 752 3.21e-52 195
Msa0553520 MtrunA17_Chr4g0003971 28.723 564 329 14 53 584 825 1347 4.85e-52 195
Msa0553520 MtrunA17_Chr4g0003971 25.502 647 403 16 53 650 161 777 1.07e-45 176
Msa0553520 MtrunA17_Chr3g0104621 27.769 659 393 20 36 640 35 664 5.52e-52 195
Msa0553520 MtrunA17_Chr3g0104621 26.364 550 342 18 52 574 763 1276 4.54e-45 174
Msa0553520 MtrunA17_Chr1g0148841 28.597 556 340 14 52 584 876 1397 6.72e-52 194
Msa0553520 MtrunA17_Chr1g0148841 25.183 683 435 18 52 687 165 818 1.65e-41 163
Msa0553520 MtrunA17_Chr1g0180971 42.412 257 140 4 33 286 397 648 7.22e-52 192
Msa0553520 MtrunA17_Chr7g0262241 28.205 546 329 13 53 574 880 1386 2.64e-51 193
Msa0553520 MtrunA17_Chr7g0262241 26.299 635 390 21 53 637 162 768 1.54e-46 178
Msa0553520 MtrunA17_Chr8g0340651 27.624 543 332 12 52 568 904 1411 6.44e-51 192
Msa0553520 MtrunA17_Chr8g0340651 25.496 706 432 25 45 689 166 838 1.97e-43 169
Msa0553520 MtrunA17_Chr7g0262251 28.036 560 326 14 53 574 827 1347 8.05e-51 191
Msa0553520 MtrunA17_Chr7g0262251 27.732 613 391 17 53 637 175 763 4.87e-49 186
Msa0553520 MtrunA17_Chr8g0393191 42.400 250 140 3 53 300 69 316 1.21e-50 189
Msa0553520 MtrunA17_Chr8g0393191 23.659 317 214 8 347 640 502 813 1.53e-15 80.9
Msa0553520 MtrunA17_Chr7g0262221 29.032 558 320 16 53 574 854 1371 5.89e-50 189
Msa0553520 MtrunA17_Chr7g0262221 24.806 645 399 17 53 637 163 781 8.36e-44 170
Msa0553520 MtrunA17_Chr7g0261971 27.518 556 339 14 53 580 875 1394 3.48e-49 186
Msa0553520 MtrunA17_Chr7g0261971 25.592 633 397 18 53 637 158 764 5.35e-43 167
Msa0553520 MtrunA17_Chr7g0265981 25.654 612 383 13 52 632 882 1452 1.34e-48 184
Msa0553520 MtrunA17_Chr7g0265981 27.304 586 353 18 38 572 165 728 9.13e-41 160
Msa0553520 MtrunA17_Chr1g0148811 26.215 679 413 19 3 641 788 1418 2.83e-48 184
Msa0553520 MtrunA17_Chr1g0148811 26.877 666 399 24 49 660 148 779 5.53e-39 155
Msa0553520 MtrunA17_Chr7g0262231 27.037 540 343 11 53 574 883 1389 1.00e-47 182
Msa0553520 MtrunA17_Chr7g0262231 26.341 634 391 19 53 637 162 768 2.17e-45 175
Msa0553520 MtrunA17_Chr1g0171351 26.837 626 371 18 52 640 893 1468 1.41e-47 181
Msa0553520 MtrunA17_Chr1g0171351 25.884 707 417 24 47 688 170 834 5.55e-43 167
Msa0553520 MtrunA17_Chr7g0261951 27.568 555 321 14 53 574 879 1385 7.81e-47 179
Msa0553520 MtrunA17_Chr7g0261951 25.276 633 399 18 53 637 162 768 9.13e-44 170
Msa0553520 MtrunA17_Chr3g0138261 27.839 546 337 14 52 573 869 1381 2.80e-46 177
Msa0553520 MtrunA17_Chr3g0138261 26.316 608 367 18 53 613 166 739 1.68e-42 166
Msa0553520 MtrunA17_Chr5g0411621 42.449 245 127 4 53 290 51 288 3.66e-46 175
Msa0553520 MtrunA17_Chr5g0411621 23.247 271 196 8 373 640 462 723 2.81e-12 70.1
Msa0553520 MtrunA17_Chr0c20g0493841 24.658 657 408 17 13 631 808 1415 8.36e-46 176
Msa0553520 MtrunA17_Chr0c20g0493841 24.653 649 422 16 53 658 168 792 6.92e-45 173
Msa0553520 MtrunA17_Chr7g0265961 25.481 675 402 20 45 661 170 801 1.60e-45 175
Msa0553520 MtrunA17_Chr7g0265961 25.532 611 381 13 52 640 830 1388 6.82e-41 161
Msa0553520 MtrunA17_Chr4g0028621 41.245 257 143 4 33 286 491 742 3.55e-45 174
Msa0553520 MtrunA17_Chr7g0265971 26.425 579 367 13 38 572 159 722 2.18e-44 172
Msa0553520 MtrunA17_Chr7g0265971 25.659 569 364 10 52 591 874 1412 4.84e-43 167
Msa0553520 MtrunA17_Chr4g0062871 27.911 541 339 14 52 574 843 1350 2.70e-44 171
Msa0553520 MtrunA17_Chr4g0062871 25.793 694 431 21 53 692 150 813 8.17e-40 157
Msa0553520 MtrunA17_Chr4g0004021 26.158 669 417 18 20 635 131 775 2.77e-44 171
Msa0553520 MtrunA17_Chr4g0004021 29.128 436 267 12 53 474 863 1270 3.46e-43 168
Msa0553520 MtrunA17_Chr1g0198291 25.632 593 354 14 52 608 893 1434 6.23e-44 170
Msa0553520 MtrunA17_Chr1g0198291 27.523 654 383 26 41 637 179 798 4.74e-40 158
Msa0553520 MtrunA17_Chr5g0429871 25.938 613 405 14 37 632 650 1230 3.44e-43 168
Msa0553520 MtrunA17_Chr5g0429871 25.660 530 316 18 95 572 20 523 1.16e-32 135
Msa0553520 MtrunA17_Chr7g0261981 25.424 649 405 19 53 652 162 780 1.30e-42 166
Msa0553520 MtrunA17_Chr7g0261981 26.545 550 307 18 53 574 861 1341 1.08e-40 160
Msa0553520 MtrunA17_Chr7g0266001 25.303 577 376 12 38 572 44 607 8.69e-40 155
Msa0553520 MtrunA17_Chr4g0069211 23.692 650 416 18 53 658 167 780 2.36e-38 153
Msa0553520 MtrunA17_Chr4g0069211 33.065 248 153 4 13 248 796 1042 4.10e-32 133
Msa0553520 MtrunA17_Chr7g0262321 27.293 458 284 11 48 492 563 984 9.96e-35 142
Msa0553520 MtrunA17_Chr7g0262321 22.921 541 370 14 152 675 17 527 9.78e-26 113
Msa0553520 MtrunA17_Chr3g0093331 37.069 232 141 4 73 300 18 248 2.35e-34 132
Msa0553520 MtrunA17_Chr6g0472481 32.883 222 133 4 53 259 13 233 4.49e-31 122
Msa0553520 MtrunA17_Chr4g0039221 96.429 56 2 0 33 88 9 64 3.05e-30 113
Msa0553520 MtrunA17_Chr7g0215001 25.610 410 214 16 200 560 1 368 1.36e-21 97.4
Msa0553520 MtrunA17_Chr7g0249091 32.171 258 128 11 37 267 87 324 5.44e-19 89.0
Msa0553520 MtrunA17_Chr4g0047831 52.564 78 37 0 174 251 6 83 8.96e-19 82.0
Msa0553520 MtrunA17_Chr4g0050191 64.815 54 17 1 33 86 41 92 5.05e-15 71.6
Msa0553520 MtrunA17_Chr7g0257321 59.259 54 19 1 33 86 3 53 2.24e-14 68.2
Msa0553520 MtrunA17_Chr6g0452071 32.243 214 130 8 49 253 226 433 1.64e-13 73.6
Msa0553520 MtrunA17_Chr1g0178481 29.245 212 129 6 52 254 395 594 3.99e-13 72.8
Msa0553520 MtrunA17_Chr6g0452141 29.044 272 164 11 1 253 976 1237 5.53e-13 72.8
Msa0553520 MtrunA17_Chr6g0452111 31.776 214 131 8 49 253 1031 1238 8.48e-13 72.0
Msa0553520 MtrunA17_Chr6g0451881 31.944 216 128 9 49 253 1020 1227 1.39e-12 71.6
Msa0553520 MtrunA17_Chr1g0194031 32.323 198 115 8 49 238 397 583 1.40e-12 71.2
Msa0553520 MtrunA17_Chr4g0041871 31.193 218 115 11 39 238 1005 1205 1.51e-12 71.2
Msa0553520 MtrunA17_Chr4g0041871 30.804 224 138 9 49 266 356 568 3.49e-12 70.1
Msa0553520 MtrunA17_Chr7g0233901 32.338 201 103 10 63 246 384 568 1.85e-12 71.2
Msa0553520 MtrunA17_Chr7g0233901 29.515 227 140 10 49 266 1008 1223 5.36e-11 66.2
Msa0553520 MtrunA17_Chr4g0026741 52.542 59 28 0 30 88 46 104 2.10e-12 65.1
Msa0553520 MtrunA17_Chr4g0061601 28.704 216 140 8 49 259 400 606 2.60e-12 70.1
Msa0553520 MtrunA17_Chr3g0093041 25.510 196 127 6 65 254 207 389 4.04e-12 69.3
Msa0553520 MtrunA17_Chr4g0060401 25.541 231 157 7 36 262 613 832 4.20e-12 69.7
Msa0553520 MtrunA17_Chr6g0452171 31.905 210 126 9 37 238 1021 1221 6.22e-12 69.3
Msa0553520 MtrunA17_Chr3g0132711 25.000 196 128 6 65 254 221 403 8.38e-12 68.6
Msa0553520 MtrunA17_Chr1g0193991 31.818 198 116 8 49 238 402 588 8.92e-12 68.9
Msa0553520 MtrunA17_Chr3g0123411 29.630 216 137 8 49 259 918 1123 9.40e-12 68.9
Msa0553520 MtrunA17_Chr7g0227391 27.602 221 129 9 53 259 442 645 1.05e-11 68.2
Msa0553520 MtrunA17_Chr6g0452041 31.481 216 129 9 49 253 1032 1239 1.22e-11 68.6
Msa0553520 MtrunA17_Chr5g0433051 28.448 232 138 9 51 272 479 692 1.40e-11 67.8
Msa0553520 MtrunA17_Chr6g0474071 31.313 198 119 8 49 238 226 414 1.48e-11 67.4
Msa0553520 MtrunA17_Chr2g0285191 31.250 192 110 6 49 230 411 590 1.94e-11 67.8
Msa0553520 MtrunA17_Chr4g0069351 31.481 216 117 9 37 238 379 577 2.30e-11 67.4
Msa0553520 MtrunA17_Chr6g0452061 30.233 215 133 8 49 253 542 749 2.63e-11 67.0
Msa0553520 MtrunA17_Chr3g0119381 31.579 209 111 9 37 230 400 591 2.74e-11 67.4
Msa0553520 MtrunA17_Chr3g0138211 30.189 212 125 7 37 238 397 595 3.81e-11 67.0
Msa0553520 MtrunA17_Chr2g0285301 30.631 222 137 7 15 230 346 556 5.48e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0553520 AT3G21090.1 73.958 672 169 1 27 692 19 690 0.0 1069
Msa0553520 AT1G51500.1 73.134 670 176 3 27 692 18 687 0.0 1022
Msa0553520 AT1G51460.1 61.103 671 250 2 32 692 9 678 0.0 854
Msa0553520 AT1G17840.1 59.840 625 245 5 33 656 50 669 0.0 728
Msa0553520 AT2G28070.2 37.175 616 362 8 30 637 111 709 5.25e-129 399
Msa0553520 AT2G28070.1 37.175 616 362 8 30 637 111 709 5.25e-129 399
Msa0553520 AT2G01320.8 31.429 560 354 11 35 586 72 609 8.23e-83 275
Msa0553520 AT2G01320.5 31.429 560 354 11 35 586 72 609 8.23e-83 275
Msa0553520 AT2G01320.1 31.429 560 354 11 35 586 72 609 2.16e-82 276
Msa0553520 AT2G01320.4 31.429 560 354 11 35 586 72 609 2.16e-82 276
Msa0553520 AT2G01320.2 31.429 560 354 11 35 586 72 609 2.18e-82 276
Msa0553520 AT2G01320.3 31.429 560 354 11 35 586 72 609 2.29e-82 276
Msa0553520 AT2G39350.1 33.148 540 338 7 50 572 106 639 3.84e-77 262
Msa0553520 AT2G01320.7 32.618 466 288 7 35 493 72 518 1.09e-76 255
Msa0553520 AT2G01320.6 32.618 466 288 7 35 493 72 518 1.09e-76 255
Msa0553520 AT3G55090.1 32.156 538 344 5 50 572 104 635 8.34e-76 258
Msa0553520 AT3G55100.1 32.014 556 328 12 45 580 41 566 2.39e-74 253
Msa0553520 AT3G55100.2 32.014 556 328 12 45 580 41 566 2.39e-74 253
Msa0553520 AT1G31770.1 31.086 608 360 15 47 635 75 642 1.07e-73 251
Msa0553520 AT3G55110.1 30.931 569 364 9 51 611 89 636 1.10e-72 249
Msa0553520 AT3G55130.1 29.781 638 387 10 51 640 97 721 3.90e-72 248
Msa0553520 AT2G37360.1 31.041 538 356 7 50 580 130 659 3.92e-72 249
Msa0553520 AT5G13580.1 32.477 545 313 8 50 567 105 621 7.67e-72 248
Msa0553520 AT1G71960.1 32.673 606 360 22 51 636 81 658 9.72e-72 246
Msa0553520 AT5G06530.3 31.203 532 341 11 32 547 156 678 6.09e-71 244
Msa0553520 AT5G06530.2 31.203 532 341 11 32 547 156 678 1.67e-70 244
Msa0553520 AT5G06530.1 31.203 532 341 11 32 547 156 678 1.67e-70 244
Msa0553520 AT2G13610.1 29.079 619 394 11 36 636 45 636 8.15e-69 238
Msa0553520 AT3G53510.1 31.354 539 344 7 50 580 123 643 9.55e-69 239
Msa0553520 AT4G27420.1 34.848 462 247 11 47 488 60 487 3.13e-68 236
Msa0553520 AT3G25620.2 29.371 572 360 13 6 547 31 588 1.32e-67 235
Msa0553520 AT4G25750.1 30.405 592 350 15 53 635 30 568 1.49e-65 227
Msa0553520 AT5G06530.4 31.504 492 314 10 70 547 1 483 5.52e-65 223
Msa0553520 AT3G13220.1 32.203 531 327 13 51 568 104 614 6.54e-64 225
Msa0553520 AT3G25620.1 34.186 430 244 11 6 407 31 449 2.26e-63 218
Msa0553520 AT1G53270.1 29.174 593 359 13 51 638 48 584 6.19e-63 220
Msa0553520 AT5G19410.2 27.379 599 384 14 53 642 75 631 1.76e-61 217
Msa0553520 AT5G19410.1 27.379 599 384 14 53 642 66 622 1.85e-61 217
Msa0553520 AT1G15210.1 29.443 574 357 13 52 608 866 1408 9.50e-58 213
Msa0553520 AT1G15210.1 25.577 563 358 12 53 572 184 728 2.15e-39 157
Msa0553520 AT5G52860.1 29.195 596 358 17 49 635 40 580 3.32e-56 202
Msa0553520 AT1G59870.1 28.201 578 359 14 52 608 893 1435 1.10e-55 206
Msa0553520 AT1G59870.1 24.465 654 415 18 44 647 177 801 1.25e-42 167
Msa0553520 AT3G53480.1 27.174 552 360 11 37 574 860 1383 2.58e-54 202
Msa0553520 AT3G53480.1 25.588 680 397 26 53 665 189 826 1.25e-45 176
Msa0553520 AT3G30842.1 30.314 541 324 17 53 574 848 1354 3.86e-53 199
Msa0553520 AT3G30842.1 27.225 573 327 22 53 566 161 702 1.10e-42 167
Msa0553520 AT1G15520.1 28.080 552 326 15 53 573 852 1363 4.48e-53 199
Msa0553520 AT1G15520.1 27.740 584 341 18 41 572 159 713 2.24e-46 178
Msa0553520 AT2G37010.2 30.388 464 276 11 33 468 484 928 5.42e-53 198
Msa0553520 AT2G37010.1 30.388 464 276 11 33 468 484 928 5.42e-53 198
Msa0553520 AT1G53390.1 28.790 587 343 16 33 572 507 1065 6.38e-53 198
Msa0553520 AT4G15230.3 26.547 614 384 16 47 637 821 1390 4.56e-52 196
Msa0553520 AT4G15230.3 24.373 718 436 25 22 674 120 795 5.58e-49 186
Msa0553520 AT4G15230.1 26.547 614 384 16 47 637 821 1390 4.56e-52 196
Msa0553520 AT4G15230.1 24.373 718 436 25 22 674 120 795 5.58e-49 186
Msa0553520 AT4G15230.4 26.547 614 384 16 47 637 742 1311 5.65e-52 195
Msa0553520 AT4G15230.4 24.373 718 436 25 22 674 41 716 6.03e-49 186
Msa0553520 AT3G16340.1 27.580 562 353 14 52 589 840 1371 5.78e-52 195
Msa0553520 AT3G16340.1 26.871 588 349 15 33 567 142 701 4.18e-46 177
Msa0553520 AT3G16340.2 27.580 562 353 14 52 589 835 1366 5.82e-52 195
Msa0553520 AT3G16340.2 26.995 589 342 17 33 567 142 696 1.77e-44 172
Msa0553520 AT2G29940.1 28.448 580 358 17 52 607 852 1398 3.87e-51 192
Msa0553520 AT2G29940.1 27.551 588 343 16 38 572 163 720 4.34e-49 186
Msa0553520 AT4G15215.1 27.839 546 343 16 47 574 811 1323 1.27e-49 188
Msa0553520 AT4G15215.1 24.051 711 440 22 22 674 117 785 2.59e-43 169
Msa0553520 AT4G15215.8 27.839 546 343 16 47 574 808 1320 1.29e-49 188
Msa0553520 AT4G15215.8 24.051 711 440 22 22 674 114 782 3.40e-43 169
Msa0553520 AT4G15215.10 27.839 546 343 16 47 574 808 1320 1.29e-49 188
Msa0553520 AT4G15215.10 24.051 711 440 22 22 674 114 782 3.40e-43 169
Msa0553520 AT4G15215.6 27.839 546 343 16 47 574 808 1320 1.29e-49 188
Msa0553520 AT4G15215.6 24.051 711 440 22 22 674 114 782 3.40e-43 169
Msa0553520 AT4G15215.7 27.839 546 343 16 47 574 808 1320 1.29e-49 188
Msa0553520 AT4G15215.7 24.051 711 440 22 22 674 114 782 3.40e-43 169
Msa0553520 AT4G15230.2 28.015 539 325 15 47 563 821 1318 1.40e-49 188
Msa0553520 AT4G15230.2 24.373 718 436 25 22 674 120 795 7.38e-49 186
Msa0553520 AT4G15215.9 27.706 545 345 15 47 574 815 1327 1.43e-49 188
Msa0553520 AT4G15215.9 23.769 711 449 21 22 674 114 789 1.46e-43 170
Msa0553520 AT4G15215.4 27.706 545 345 15 47 574 815 1327 1.43e-49 188
Msa0553520 AT4G15215.4 23.769 711 449 21 22 674 114 789 1.46e-43 170
Msa0553520 AT4G15215.5 27.706 545 345 15 47 574 815 1327 1.43e-49 188
Msa0553520 AT4G15215.5 23.769 711 449 21 22 674 114 789 1.46e-43 170
Msa0553520 AT4G15215.3 27.706 545 345 15 47 574 815 1327 1.43e-49 188
Msa0553520 AT4G15215.3 23.769 711 449 21 22 674 114 789 1.46e-43 170
Msa0553520 AT4G15215.2 27.706 545 345 15 47 574 815 1327 1.43e-49 188
Msa0553520 AT4G15215.2 23.769 711 449 21 22 674 114 789 1.46e-43 170
Msa0553520 AT4G15215.11 27.706 545 345 15 47 574 818 1330 1.65e-49 188
Msa0553520 AT4G15215.11 23.769 711 449 21 22 674 117 792 1.64e-43 169
Msa0553520 AT4G15236.1 26.976 582 354 20 47 600 811 1349 2.40e-49 187
Msa0553520 AT4G15236.1 24.627 670 418 22 44 659 143 779 1.19e-41 164
Msa0553520 AT2G37280.3 26.087 552 364 11 37 573 852 1374 4.97e-49 186
Msa0553520 AT2G37280.3 23.427 747 446 24 22 680 114 822 2.53e-44 172
Msa0553520 AT2G37280.1 26.087 552 364 11 37 573 823 1345 5.83e-49 186
Msa0553520 AT2G37280.1 24.741 675 419 20 22 637 114 758 3.24e-48 184
Msa0553520 AT2G37280.4 26.119 536 353 10 52 573 681 1187 7.07e-49 186
Msa0553520 AT2G37280.4 24.024 666 418 20 65 680 8 635 8.45e-45 173
Msa0553520 AT4G15233.7 26.644 593 342 21 47 600 795 1333 2.11e-48 184
Msa0553520 AT4G15233.7 25.589 637 398 23 39 637 143 741 6.18e-45 174
Msa0553520 AT4G15233.8 26.644 593 342 21 47 600 804 1342 2.14e-48 184
Msa0553520 AT4G15233.8 24.580 655 391 24 39 637 143 750 6.35e-38 152
Msa0553520 AT4G15233.3 26.644 593 342 21 47 600 751 1289 2.21e-48 184
Msa0553520 AT4G15233.3 24.885 655 398 23 39 637 81 697 4.02e-42 165
Msa0553520 AT4G15233.6 26.644 593 342 21 47 600 751 1289 2.21e-48 184
Msa0553520 AT4G15233.6 24.885 655 398 23 39 637 81 697 4.02e-42 165
Msa0553520 AT4G15233.1 26.644 593 342 21 47 600 813 1351 2.27e-48 184
Msa0553520 AT4G15233.1 24.885 655 398 23 39 637 143 759 3.22e-42 166
Msa0553520 AT2G37280.2 25.622 683 403 22 22 637 114 758 2.98e-48 184
Msa0553520 AT2G37280.2 26.168 535 350 10 37 557 823 1326 3.24e-48 184
Msa0553520 AT2G26910.1 27.985 536 339 13 52 568 844 1351 3.49e-48 184
Msa0553520 AT2G26910.1 25.360 694 419 23 46 680 143 796 1.44e-40 160
Msa0553520 AT5G60740.1 40.511 274 148 6 33 303 499 760 7.47e-47 179
Msa0553520 AT1G15520.2 27.740 584 341 18 41 572 159 713 1.47e-46 179
Msa0553520 AT1G15520.2 29.841 439 251 13 53 469 852 1255 4.51e-43 168
Msa0553520 AT4G15233.2 27.390 544 311 19 47 557 813 1305 1.75e-46 179
Msa0553520 AT4G15233.2 24.885 655 398 23 39 637 143 759 2.63e-42 166
Msa0553520 AT4G15233.5 26.207 580 347 19 54 600 677 1208 1.13e-45 176
Msa0553520 AT4G15233.5 25.585 641 401 23 39 641 81 683 5.11e-45 174
Msa0553520 AT4G15233.4 26.207 580 347 19 54 600 677 1208 1.13e-45 176
Msa0553520 AT4G15233.4 25.585 641 401 23 39 641 81 683 5.11e-45 174
Msa0553520 AT1G66950.1 27.273 583 323 22 47 583 874 1401 2.10e-44 172
Msa0553520 AT1G66950.1 26.889 569 355 15 49 572 182 734 1.11e-40 161
Msa0553520 AT2G36380.1 26.847 555 337 16 47 574 873 1385 7.53e-44 171
Msa0553520 AT2G36380.1 25.044 567 368 14 49 572 180 732 5.99e-38 152
Msa0553520 AT3G21080.1 50.340 147 64 3 510 651 105 247 7.73e-37 139
Msa0553520 AT5G61700.2 25.118 211 141 5 30 234 592 791 3.01e-16 83.6
Msa0553520 AT5G61700.4 25.118 211 141 5 30 234 592 791 3.01e-16 83.6
Msa0553520 AT5G61700.1 25.105 239 160 7 30 262 592 817 8.89e-15 79.0
Msa0553520 AT5G61740.1 26.596 188 121 5 30 211 584 760 1.01e-13 75.5
Msa0553520 AT5G61740.3 26.596 188 121 5 30 211 445 621 1.08e-13 75.1
Msa0553520 AT5G61740.2 26.596 188 121 5 30 211 550 726 1.28e-13 75.1
Msa0553520 AT5G39040.1 31.019 216 135 8 49 259 409 615 6.32e-13 72.4
Msa0553520 AT3G47760.1 23.431 239 164 7 30 262 571 796 1.35e-12 71.6
Msa0553520 AT3G47760.3 23.431 239 164 7 30 262 611 836 1.46e-12 71.6
Msa0553520 AT3G47740.1 23.048 269 186 7 2 262 577 832 1.56e-12 71.6
Msa0553520 AT3G47760.2 23.431 239 164 7 30 262 581 806 2.03e-12 71.2
Msa0553520 AT4G18050.1 31.606 193 108 6 49 230 368 547 2.48e-12 71.2
Msa0553520 AT4G18050.2 31.606 193 108 6 49 230 378 557 2.76e-12 70.9
Msa0553520 AT3G47750.1 22.747 233 161 7 36 262 618 837 2.93e-12 70.9
Msa0553520 AT4G28620.1 27.731 238 148 8 29 259 435 655 2.99e-12 70.5
Msa0553520 AT1G70610.2 29.675 246 144 10 53 286 291 519 3.19e-12 70.1
Msa0553520 AT4G28630.1 26.829 246 154 10 29 266 433 660 3.22e-12 70.5
Msa0553520 AT3G47780.1 24.034 233 158 7 36 262 616 835 3.79e-12 70.5
Msa0553520 AT2G47000.4 31.313 198 117 9 49 238 397 583 4.05e-12 70.5
Msa0553520 AT2G47000.3 31.313 198 117 9 49 238 397 583 4.24e-12 70.1
Msa0553520 AT2G47000.7 31.313 198 117 9 49 238 397 583 4.24e-12 70.1
Msa0553520 AT1G70610.1 29.675 246 144 10 53 286 472 700 4.69e-12 69.7
Msa0553520 AT2G47000.2 31.313 198 117 9 49 238 397 583 4.77e-12 70.1
Msa0553520 AT5G58270.1 28.319 226 137 8 44 259 485 695 4.81e-12 69.7
Msa0553520 AT3G47790.1 20.601 233 172 4 14 242 567 790 6.79e-12 69.7
Msa0553520 AT2G47000.6 31.313 198 117 9 49 238 397 583 7.00e-12 69.7
Msa0553520 AT2G47000.5 31.313 198 117 9 49 238 397 583 7.00e-12 69.7
Msa0553520 AT2G47000.1 31.313 198 117 9 49 238 397 583 7.00e-12 69.7
Msa0553520 AT3G47790.3 21.525 223 162 4 14 232 567 780 7.02e-12 69.3
Msa0553520 AT3G47790.2 21.525 223 162 4 14 232 448 661 7.40e-12 69.3
Msa0553520 AT3G47730.1 26.554 177 110 6 65 234 558 721 2.00e-11 68.2
Msa0553520 AT2G36910.1 32.487 197 116 8 49 238 381 567 2.07e-11 68.2
Msa0553520 AT1G10680.2 26.797 306 178 13 49 342 374 645 2.46e-11 67.8
Msa0553520 AT1G10680.1 31.390 223 124 11 49 259 374 579 2.67e-11 67.8
Msa0553520 AT4G25450.1 31.064 235 134 12 49 272 483 700 4.46e-11 66.6
Msa0553520 AT4G25960.1 31.674 221 126 10 49 259 414 619 4.50e-11 67.0
Msa0553520 AT3G47770.1 23.077 221 151 6 48 262 599 806 4.59e-11 67.0
Msa0553520 AT4G25450.3 31.064 235 134 12 49 272 314 531 4.98e-11 66.2
Msa0553520 AT3G47770.2 22.318 233 162 6 36 262 613 832 6.27e-11 66.2

Find 148 sgRNAs with CRISPR-Local

Find 477 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCAGATCCTTTCATGAATT+TGG 0.135560 4_1:+50772107 Msa0553520:CDS
ATGAAAGGATCTGCTGAATT+TGG 0.146252 4_1:-50772099 None:intergenic
ATGATTCCCATGAGAAAATT+TGG 0.154614 4_1:-50773510 None:intergenic
TTGAGAAAAGACCTTCTTTC+AGG 0.175896 4_1:+50774910 Msa0553520:CDS
TCTTTCATCATTCCCGTTCT+TGG 0.177169 4_1:+50773341 Msa0553520:CDS
AGAGTTATGTTGCCAAATTT+TGG 0.179448 4_1:+50767028 Msa0553520:CDS
GTTGGTCCTTTCCCAAAATT+TGG 0.179855 4_1:-50767040 None:intergenic
GATGGGAGAGTTTAATGTTT+TGG 0.188563 4_1:-50766704 None:intergenic
TCCTCCTTCTCTTATGTTAC+AGG 0.190030 4_1:+50774802 Msa0553520:CDS
ACATATTCTCCTGTCAGTTT+TGG 0.195140 4_1:-50774717 None:intergenic
AGTATTAGTTTATATGTATA+GGG 0.201229 4_1:+50775137 Msa0553520:three_prime_UTR
TTGATTAGGTACAGCATTAA+TGG 0.237104 4_1:+50766762 Msa0553520:five_prime_UTR
AGGTTGCTTAATGGACTAAA+TGG 0.247817 4_1:+50767067 Msa0553520:CDS
TAAGCCGCTGATTTCTTCTT+TGG 0.253209 4_1:-50770949 None:intergenic
TGGTAGAATCATGGCTATTA+TGG 0.271739 4_1:+50767102 Msa0553520:CDS
GGATAGCGCCAAACAGGTTT+TGG 0.292187 4_1:-50773687 None:intergenic
TTTCTCATGGGAATCATTAC+AGG 0.293620 4_1:+50773516 Msa0553520:CDS
AAGCTGTTGTATGGTTCTTT+TGG 0.296775 4_1:-50774889 None:intergenic
TGATGACCTCTGGATTCTTT+AGG 0.298220 4_1:+50773649 Msa0553520:CDS
CCAACTAAAAGGTTGCTTAA+TGG 0.302201 4_1:+50767058 Msa0553520:CDS
TAGTATTAGTTTATATGTAT+AGG 0.306672 4_1:+50775136 Msa0553520:three_prime_UTR
AGTCAGAATTGATGCATCTT+AGG 0.307460 4_1:-50771651 None:intergenic
CATATAACATGGTGAAATTC+AGG 0.319419 4_1:+50773394 Msa0553520:CDS
TGGAACATTATTTGTGTCCT+TGG 0.320167 4_1:+50775198 Msa0553520:three_prime_UTR
CCGTAACTGATATATGAAAT+TGG 0.321146 4_1:-50773708 None:intergenic
TTGGGAAAGGACCAACTAAA+AGG 0.333669 4_1:+50767047 Msa0553520:CDS
TGCCATCTGTTACTACTTCC+AGG 0.334733 4_1:+50774937 Msa0553520:CDS
GGTGGCGAAACTGTTTATTT+TGG 0.335273 4_1:+50771272 Msa0553520:CDS
TGATGCAACAATCATTGAAA+TGG 0.335549 4_1:+50770974 Msa0553520:CDS
GAAAGAATGAATGGATATTA+TGG 0.336869 4_1:+50773291 Msa0553520:CDS
GCCTGTGGTGCATTTATATC+AGG 0.340620 4_1:+50772598 Msa0553520:CDS
ACTTTGCTTGATACACTTGC+AGG 0.353311 4_1:+50767148 Msa0553520:CDS
CATTAGGTTAGAGCTTTGTT+TGG 0.358856 4_1:+50775299 Msa0553520:three_prime_UTR
TTTATGACTTTCATGTCAAT+TGG 0.367206 4_1:+50772622 Msa0553520:CDS
TTCCATGTAACTGTTTGATT+AGG 0.374845 4_1:+50766748 Msa0553520:five_prime_UTR
GACTGTGCAGATAGGTTAAT+AGG 0.377572 4_1:+50771005 Msa0553520:CDS
GTTATATAATTGAATTCTGC+TGG 0.378832 4_1:+50775055 Msa0553520:three_prime_UTR
TTCATTTCTTCAATAAAAGA+TGG 0.384010 4_1:-50772652 None:intergenic
CTGATCTTCCAAAACCTGTT+TGG 0.390665 4_1:+50773679 Msa0553520:CDS
ACAGGAAATGTTCTTCTCAA+TGG 0.391733 4_1:+50770715 Msa0553520:CDS
CAGATAGGTTAATAGGTAAC+TGG 0.395360 4_1:+50771012 Msa0553520:CDS
TCTTCTTTGGACATTGTTGA+TGG 0.414148 4_1:-50770936 None:intergenic
GTCCTAGCCTTATCAGCATT+AGG 0.415707 4_1:+50775283 Msa0553520:three_prime_UTR
ATGGCTATTATGGGTCCTTC+TGG 0.416172 4_1:+50767112 Msa0553520:CDS
GCTCTAACCTAATGCTGATA+AGG 0.423408 4_1:-50775290 None:intergenic
CCATTCCAAGTGGTGGGACT+TGG 0.425020 4_1:+50774770 Msa0553520:CDS
TTACGGTGCATGGGCGATAC+AGG 0.428031 4_1:+50773725 Msa0553520:CDS
ATTATGGGTCCTTCTGGCTC+TGG 0.429652 4_1:+50767118 Msa0553520:CDS
GGTAGAATCATGGCTATTAT+GGG 0.431697 4_1:+50767103 Msa0553520:CDS
TTATGAAGAGAGAGAAAAGA+TGG 0.433076 4_1:-50766722 None:intergenic
TGATGAACCGACTAGTGGTT+TGG 0.434110 4_1:+50771118 Msa0553520:CDS
GAAATTGGATAGCGCCAAAC+AGG 0.438877 4_1:-50773693 None:intergenic
CTACGGCTACACTTCCATCT+TGG 0.441109 4_1:+50772567 Msa0553520:CDS
CAGGAAATGTTCTTCTCAAT+GGG 0.444946 4_1:+50770716 Msa0553520:CDS
CATATATCAGTTACGGTGCA+TGG 0.450064 4_1:+50773715 Msa0553520:CDS
CCAATTTCATATATCAGTTA+CGG 0.456412 4_1:+50773708 Msa0553520:CDS
ATGGGAATCATTACAGGAGC+TGG 0.460308 4_1:+50773522 Msa0553520:CDS
TTTACGTGGACAAGGGAAAC+CGG 0.461223 4_1:-50771608 None:intergenic
ATAAGAAAAGAAATCTAGAA+TGG 0.461570 4_1:-50766811 None:intergenic
GATGCAACAATCATTGAAAT+GGG 0.469400 4_1:+50770975 Msa0553520:CDS
GTTGCTTCCACCAACTAGCT+TGG 0.469934 4_1:-50772423 None:intergenic
ACGCAAGAAGATGTGTTGTT+AGG 0.470386 4_1:+50770864 Msa0553520:CDS
TATGTGATAACACACATGTT+GGG 0.472789 4_1:+50774735 Msa0553520:CDS
TGCTGAGCCTGGTAGAATCA+TGG 0.476639 4_1:+50767093 Msa0553520:CDS
TCAATCTCCATGTTGTTATG+TGG 0.477967 4_1:-50766902 None:intergenic
GAGCAATAGCAACCAAGAAC+GGG 0.478605 4_1:-50773353 None:intergenic
ACCAACTAGCTTGGCTTCCA+AGG 0.481452 4_1:-50772414 None:intergenic
TCATTCACTGTCTTCTCAAG+AGG 0.483031 4_1:+50774974 Msa0553520:CDS
ATGACTTTCATGTCAATTGG+AGG 0.485960 4_1:+50772625 Msa0553520:CDS
CCAAGTCCCACCACTTGGAA+TGG 0.495424 4_1:-50774770 None:intergenic
TTTGGGTTACCTGGGAGTAG+TGG 0.496541 4_1:-50774699 None:intergenic
TTGAGATTCTCACAAGGCCT+CGG 0.498086 4_1:+50771084 Msa0553520:CDS
TGCTGCCAAGTCCCACCACT+TGG 0.499759 4_1:-50774775 None:intergenic
GCATATTGTGGTCTTAATAG+AGG 0.502246 4_1:+50766980 Msa0553520:CDS
GGAATCATGATGATGACCTC+TGG 0.502637 4_1:+50773639 Msa0553520:CDS
ATCATTGTATCTATATGTGT+TGG 0.504900 4_1:+50772523 Msa0553520:CDS
GTGAACATGTGTAGAGATGT+TGG 0.507536 4_1:+50772472 Msa0553520:CDS
CTTGAGAAGACAGTGAATGA+AGG 0.514359 4_1:-50774971 None:intergenic
ATGAAGGGGTTGATGCCTCC+TGG 0.517928 4_1:-50774955 None:intergenic
ACAGGCACCACGAGCCAAGA+TGG 0.518793 4_1:-50772581 None:intergenic
ATAGAGGAAGTTTCTTAGCA+TGG 0.521134 4_1:+50766996 Msa0553520:CDS
TTCTGACTTTGACGTTGTAA+CGG 0.522158 4_1:+50771666 Msa0553520:CDS
ACCTTGGAAGCCAAGCTAGT+TGG 0.522711 4_1:+50772413 Msa0553520:CDS
GTAGAGATGTTGGTTACTAC+TGG 0.523631 4_1:+50772482 Msa0553520:CDS
GTATTAGTTTATATGTATAG+GGG 0.523840 4_1:+50775138 Msa0553520:three_prime_UTR
TAGAGGAAGTTTCTTAGCAT+GGG 0.525350 4_1:+50766997 Msa0553520:CDS
TTGGAAGCCAAGCTAGTTGG+TGG 0.528421 4_1:+50772416 Msa0553520:CDS
CTTGAAACTGAGATAAACCT+TGG 0.528878 4_1:+50772397 Msa0553520:CDS
TATGAAGAGAGAGAAAAGAT+GGG 0.530949 4_1:-50766721 None:intergenic
TACCTAATCAAACAGTTACA+TGG 0.532226 4_1:-50766750 None:intergenic
CATTCACTGTCTTCTCAAGA+GGG 0.534132 4_1:+50774975 Msa0553520:CDS
TCCTGATATAAATGCACCAC+AGG 0.540257 4_1:-50772599 None:intergenic
AGAGCAATAGCAACCAAGAA+CGG 0.544729 4_1:-50773354 None:intergenic
ATATGTGATAACACACATGT+TGG 0.546284 4_1:+50774734 Msa0553520:CDS
ATCTTGGCTCGTGGTGCCTG+TGG 0.547250 4_1:+50772583 Msa0553520:CDS
AACGCATAGTGAATGAATCC+TGG 0.547925 4_1:-50773417 None:intergenic
TTGAGAAGACAGTGAATGAA+GGG 0.548087 4_1:-50774970 None:intergenic
CGTTGTAACGGCTACACTGA+AGG 0.548225 4_1:+50771678 Msa0553520:CDS
CTTAGAAATTGTGCTCGTGA+TGG 0.549034 4_1:+50771173 Msa0553520:CDS
ATATATCAGTTACGGTGCAT+GGG 0.552581 4_1:+50773716 Msa0553520:CDS
AATTAAGCCATTCCAAGTGG+TGG 0.556493 4_1:+50774763 Msa0553520:CDS
CTTACAACAAAACCATAGCC+TGG 0.557488 4_1:-50770751 None:intergenic
GAAATTGTGCTCGTGATGGA+AGG 0.559639 4_1:+50771177 Msa0553520:CDS
CCAGGTAACCCAAAACTGAC+AGG 0.560140 4_1:+50774708 Msa0553520:CDS
TCATACAAGAATGACTTGCT+TGG 0.561045 4_1:+50774663 Msa0553520:CDS
TTAACCTATCTGCACAGTCA+TGG 0.561627 4_1:-50771001 None:intergenic
AGCGTTCAACGTATGCCAGA+AGG 0.563888 4_1:+50772169 Msa0553520:CDS
GTCTCCATGACTGTGCAGAT+AGG 0.568429 4_1:+50770997 Msa0553520:CDS
GAGTTTGATCCACTACTCCC+AGG 0.569657 4_1:+50774690 Msa0553520:CDS
GAGGTATAAGTGGTGGCGAA+AGG 0.574362 4_1:+50771042 Msa0553520:CDS
AACATGGTGAAATTCAGGCC+AGG 0.575455 4_1:+50773399 Msa0553520:CDS
TTCCTTGATGAACCGACTAG+TGG 0.581117 4_1:+50771113 Msa0553520:CDS
GTTGTAACGGCTACACTGAA+GGG 0.582706 4_1:+50771679 Msa0553520:CDS
ATGTGATAACACACATGTTG+GGG 0.583963 4_1:+50774736 Msa0553520:CDS
TGGCATTTGAGAGGTATAAG+TGG 0.586145 4_1:+50771032 Msa0553520:CDS
TGCAAGTGTATCAAGCAAAG+TGG 0.586411 4_1:-50767146 None:intergenic
ATGTTGGTTACTACTGGCTG+AGG 0.586749 4_1:+50772488 Msa0553520:CDS
CATCTTAGGAAATGATCAGA+AGG 0.591308 4_1:-50771637 None:intergenic
ATTAAGCCATTCCAAGTGGT+GGG 0.591525 4_1:+50774764 Msa0553520:CDS
AACCACTAGTCGGTTCATCA+AGG 0.591779 4_1:-50771115 None:intergenic
TCCTGTAACATAAGAGAAGG+AGG 0.591821 4_1:-50774803 None:intergenic
AACCTAATGCTGATAAGGCT+AGG 0.598888 4_1:-50775285 None:intergenic
GCGTTCAACGTATGCCAGAA+GGG 0.602784 4_1:+50772170 Msa0553520:CDS
TACACTTCCATCTTGGCTCG+TGG 0.602988 4_1:+50772574 Msa0553520:CDS
CTCCTGGAAGTAGTAACAGA+TGG 0.608454 4_1:-50774939 None:intergenic
AGTGCGAAGACTTCACTGCT+AGG 0.611217 4_1:-50771224 None:intergenic
ATAGGTAACTGGCATTTGAG+AGG 0.611647 4_1:+50771023 Msa0553520:CDS
GCTGTAGCCAAATTCATGAA+AGG 0.611893 4_1:-50772114 None:intergenic
ATATCCTGTAACATAAGAGA+AGG 0.613354 4_1:-50774806 None:intergenic
ATAATAGCCATGATTCTACC+AGG 0.623399 4_1:-50767100 None:intergenic
TTGAATTAAGCCATTCCAAG+TGG 0.642469 4_1:+50774760 Msa0553520:CDS
TGAAGCTAAAATGGCAATCG+AGG 0.650043 4_1:+50771295 Msa0553520:CDS
ATGGAGATTGAAGCAGCAAG+TGG 0.658880 4_1:+50766914 Msa0553520:CDS
TGAGAAGACAGTGAATGAAG+GGG 0.663320 4_1:-50774969 None:intergenic
AGCAACTCAAAACACTGACA+AGG 0.665776 4_1:+50772440 Msa0553520:CDS
CATTTGAGAGGTATAAGTGG+TGG 0.666459 4_1:+50771035 Msa0553520:CDS
AGTGATTGAGAGTCTCATGA+TGG 0.667256 4_1:+50773470 Msa0553520:CDS
CTACACTGAAGGGATCTCAA+AGG 0.667394 4_1:+50771689 Msa0553520:CDS
TTGCACTTGAGATTCTCACA+AGG 0.675435 4_1:+50771078 Msa0553520:CDS
TTGCACAATCACATATAACA+TGG 0.677547 4_1:+50773383 Msa0553520:CDS
GCACTGTCCAAACCACTAGT+CGG 0.680827 4_1:-50771125 None:intergenic
GCAAGTGGTAGCAACAACAA+AGG 0.683774 4_1:+50766929 Msa0553520:CDS
AGTGATGAAGAAGCATATTG+TGG 0.688694 4_1:+50766968 Msa0553520:CDS
TAGCAACCTAAAGAATCCAG+AGG 0.696592 4_1:-50773655 None:intergenic
ATGTCCAAAGAAGAAATCAG+CGG 0.710305 4_1:+50770945 Msa0553520:CDS
TCATCAAGGAACAGTAACCG+AGG 0.728662 4_1:-50771101 None:intergenic
TTCAAATCCACATAACAACA+TGG 0.739587 4_1:+50766895 Msa0553520:exon
CATCTGTTACTACTTCCAGG+AGG 0.782086 4_1:+50774940 Msa0553520:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAATAATCCTATATTAA+AGG - chr4_1:50768032-50768051 None:intergenic 10.0%
!!! TTTTTATATTATAAGACAAT+TGG + chr4_1:50768156-50768175 Msa0553520:intron 10.0%
!! TACATTTAAAAATTTATAGA+TGG + chr4_1:50768506-50768525 Msa0553520:intron 10.0%
!! AATTTAATAACATAAAGATA+GGG - chr4_1:50768921-50768940 None:intergenic 10.0%
!! AAATTTAATAACATAAAGAT+AGG - chr4_1:50768922-50768941 None:intergenic 10.0%
!!! ATCTTTATGTTATTAAATTT+TGG + chr4_1:50768922-50768941 Msa0553520:intron 10.0%
!!! TTATTTAGAATTTTATTTCA+TGG - chr4_1:50769690-50769709 None:intergenic 10.0%
!!! TTTTAAGTTTAGTTTATATT+TGG + chr4_1:50769755-50769774 Msa0553520:intron 10.0%
!! AAAATGAAATATATTAACAA+CGG + chr4_1:50769883-50769902 Msa0553520:intron 10.0%
!!! ACAAATTCTTTTATTCAATT+AGG + chr4_1:50767377-50767396 Msa0553520:intron 15.0%
!! TAATTAAATGTACCAAAAAT+TGG + chr4_1:50767408-50767427 Msa0553520:intron 15.0%
!! ATTAACAAACATTACAATTA+TGG + chr4_1:50767622-50767641 Msa0553520:intron 15.0%
!! AATCCAATTATAATTTAACT+AGG + chr4_1:50767841-50767860 Msa0553520:intron 15.0%
!! ATCCAATTATAATTTAACTA+GGG + chr4_1:50767842-50767861 Msa0553520:intron 15.0%
!!! ATATGAGCAAATTATTTTTA+GGG - chr4_1:50767913-50767932 None:intergenic 15.0%
!!! AATATGAGCAAATTATTTTT+AGG - chr4_1:50767914-50767933 None:intergenic 15.0%
!!! TTTTTTTTCTTTCTTTCTTA+GGG + chr4_1:50767955-50767974 Msa0553520:intron 15.0%
!! CTTTCTTATATCATTTATTA+AGG - chr4_1:50768300-50768319 None:intergenic 15.0%
!! AATAGAGTAATAAATAGTTA+AGG + chr4_1:50768341-50768360 Msa0553520:intron 15.0%
!! ATAAATAGTTAAGGATATAT+CGG + chr4_1:50768350-50768369 Msa0553520:intron 15.0%
!! TTATTATAAGATAAGGAAAA+GGG - chr4_1:50768667-50768686 None:intergenic 15.0%
!!! AAAGATTTGGAAATAAATTT+TGG - chr4_1:50768863-50768882 None:intergenic 15.0%
!!! TTTATGTTATTAAATTTTGG+TGG + chr4_1:50768925-50768944 Msa0553520:intron 15.0%
!!! TAATTTATGGATTTTGAAAA+GGG + chr4_1:50769183-50769202 Msa0553520:intron 15.0%
!!! ATTTTCTTTTATAATAGAGA+CGG + chr4_1:50769366-50769385 Msa0553520:intron 15.0%
!!! ACATATTTGTAATGATTTTT+TGG + chr4_1:50769719-50769738 Msa0553520:intron 15.0%
!! ACTGTATAATTACAATAAAA+AGG + chr4_1:50769965-50769984 Msa0553520:intron 15.0%
!! AGATTAAGTATAATTCATTA+TGG - chr4_1:50770075-50770094 None:intergenic 15.0%
!! AATTACTAAATAATACATAC+AGG - chr4_1:50771718-50771737 None:intergenic 15.0%
!! TAACAAAATCAATATTATGA+AGG - chr4_1:50772353-50772372 None:intergenic 15.0%
!! AATGTAAAGTGTATTATATT+TGG + chr4_1:50773835-50773854 Msa0553520:intron 15.0%
!!! GTGTTTTCAATTTAAATAAT+TGG - chr4_1:50774399-50774418 None:intergenic 15.0%
!! AATGCTAATTAATATGAATT+TGG + chr4_1:50774631-50774650 Msa0553520:intron 15.0%
!!! TAGTATTAGTTTATATGTAT+AGG + chr4_1:50775136-50775155 Msa0553520:three_prime_UTR 15.0%
!!! AGTATTAGTTTATATGTATA+GGG + chr4_1:50775137-50775156 Msa0553520:three_prime_UTR 15.0%
!! TTTAAAAAAAATGTAATCCA+AGG - chr4_1:50775218-50775237 None:intergenic 15.0%
!! ATAAGAAAAGAAATCTAGAA+TGG - chr4_1:50766814-50766833 None:intergenic 20.0%
!!! AACCAAAATATCATGTTTTT+TGG + chr4_1:50767293-50767312 Msa0553520:intron 20.0%
!!! TTCCAAAAAACATGATATTT+TGG - chr4_1:50767298-50767317 None:intergenic 20.0%
!! TTATGGGAAGAATAATATTA+AGG + chr4_1:50767867-50767886 Msa0553520:intron 20.0%
!!! GTTTTTTTTCTTTCTTTCTT+AGG + chr4_1:50767954-50767973 Msa0553520:intron 20.0%
!! AATAATCCTATATTAAAGGA+TGG - chr4_1:50768028-50768047 None:intergenic 20.0%
!!! GGATTATTTTATCAAAATCA+TGG + chr4_1:50768040-50768059 Msa0553520:intron 20.0%
!! AGTAACATTAAAGTTTCATT+TGG + chr4_1:50768376-50768395 Msa0553520:intron 20.0%
!! TTTCATTTGGTATTGTAAAA+CGG + chr4_1:50768389-50768408 Msa0553520:intron 20.0%
!! CTTATTATAAGATAAGGAAA+AGG - chr4_1:50768668-50768687 None:intergenic 20.0%
!!! CTTTTCCTTATCTTATAATA+AGG + chr4_1:50768666-50768685 Msa0553520:intron 20.0%
!! CTATTCCTTATTATAAGATA+AGG - chr4_1:50768674-50768693 None:intergenic 20.0%
!! TATCTTATAATAAGGAATAG+AGG + chr4_1:50768674-50768693 Msa0553520:intron 20.0%
!! ACAATACATAAAAATATGCA+AGG + chr4_1:50768725-50768744 Msa0553520:intron 20.0%
!! TCAATACCAAAAGAAAAAAA+AGG + chr4_1:50768766-50768785 Msa0553520:intron 20.0%
!!! TCTATTCCTTTTTTTTCTTT+TGG - chr4_1:50768775-50768794 None:intergenic 20.0%
!! AAAAGAAAAAAAAGGAATAG+AGG + chr4_1:50768774-50768793 Msa0553520:intron 20.0%
!! AAAGAAAAAAAAGGAATAGA+GGG + chr4_1:50768775-50768794 Msa0553520:intron 20.0%
!!! ATTAACTTTGTTCTTTTCAA+TGG - chr4_1:50768894-50768913 None:intergenic 20.0%
!! TCAAAATATCATTTCTCATT+AGG - chr4_1:50768991-50769010 None:intergenic 20.0%
!!! TTTTTATTGGTCAAAAACAA+TGG - chr4_1:50769097-50769116 None:intergenic 20.0%
!!! TTGTTTTTCTCACTTTTTAT+TGG - chr4_1:50769110-50769129 None:intergenic 20.0%
!! AATAAAAAGTGAGAAAAACA+AGG + chr4_1:50769109-50769128 Msa0553520:intron 20.0%
!!! ATGATATTTTGACATCTATT+TGG - chr4_1:50769153-50769172 None:intergenic 20.0%
!!! CTTTTCAAAATCCATAAATT+AGG - chr4_1:50769184-50769203 None:intergenic 20.0%
!!! CTAATTTATGGATTTTGAAA+AGG + chr4_1:50769182-50769201 Msa0553520:intron 20.0%
!! GATGCATTTAATCTATATTA+AGG - chr4_1:50769320-50769339 None:intergenic 20.0%
!!! TTTTCTTTTATAATAGAGAC+GGG + chr4_1:50769367-50769386 Msa0553520:intron 20.0%
!! TTATGAAGGTAATGAAATAT+AGG - chr4_1:50769436-50769455 None:intergenic 20.0%
!! TAGATCTTAGTTTAGATTTA+AGG + chr4_1:50769495-50769514 Msa0553520:intron 20.0%
!!! ATTTGGAGATATTTTTTTTG+AGG + chr4_1:50769772-50769791 Msa0553520:intron 20.0%
!! TTAAGTATAATTCATTATGG+TGG - chr4_1:50770072-50770091 None:intergenic 20.0%
!! TGGTAATTATTATCAACTTA+CGG - chr4_1:50770321-50770340 None:intergenic 20.0%
!!! TTGAATTTGATAATTGATCA+TGG - chr4_1:50770341-50770360 None:intergenic 20.0%
!! CTAAATATAAATGCTTACAT+TGG - chr4_1:50772223-50772242 None:intergenic 20.0%
!! TTCATTTCTTCAATAAAAGA+TGG - chr4_1:50772655-50772674 None:intergenic 20.0%
!!! ATCTTTTATTGAAGAAATGA+AGG + chr4_1:50772654-50772673 Msa0553520:CDS 20.0%
!! CAGTAATATGAGTTTATAAA+CGG + chr4_1:50772720-50772739 Msa0553520:intron 20.0%
!!! TTAACATAAGCTATTTTCAA+AGG - chr4_1:50773070-50773089 None:intergenic 20.0%
!!! TTTTATAGAGAAAGAATGAA+TGG + chr4_1:50773282-50773301 Msa0553520:CDS 20.0%
!!! TTTTTCACTGTTAACATATA+TGG + chr4_1:50773438-50773457 Msa0553520:CDS 20.0%
!! GAATAAGTAAGAATCAATTA+TGG + chr4_1:50773917-50773936 Msa0553520:intron 20.0%
!!! AACATAAATGACATCTTTTA+AGG + chr4_1:50774130-50774149 Msa0553520:intron 20.0%
!! AGATAAAATAAATGTGCAAT+TGG - chr4_1:50774158-50774177 None:intergenic 20.0%
!! ATATTTGTCATCAATAAAGA+TGG - chr4_1:50774459-50774478 None:intergenic 20.0%
!!! TTGACTTCTAAAAAGATATT+AGG - chr4_1:50774487-50774506 None:intergenic 20.0%
!!! GTATTAGTTTATATGTATAG+GGG + chr4_1:50775138-50775157 Msa0553520:three_prime_UTR 20.0%
!! TCCAATTAAGATAAGAAAAA+TGG + chr4_1:50775178-50775197 Msa0553520:three_prime_UTR 20.0%
!!! TCCATTTTTCTTATCTTAAT+TGG - chr4_1:50775182-50775201 None:intergenic 20.0%
!!! TTTAATGTTTTGGGTATGAA+CGG - chr4_1:50766697-50766716 None:intergenic 25.0%
! ACCTTAATTTACTCATGTTT+GGG - chr4_1:50767265-50767284 None:intergenic 25.0%
! AACCTTAATTTACTCATGTT+TGG - chr4_1:50767266-50767285 None:intergenic 25.0%
!!! TCAACCTTTTATTAGTTTGA+TGG + chr4_1:50767331-50767350 Msa0553520:intron 25.0%
! GAAACCATCAAACTAATAAA+AGG - chr4_1:50767338-50767357 None:intergenic 25.0%
!! AAAGGGAAATATCCAATTTT+TGG - chr4_1:50767423-50767442 None:intergenic 25.0%
! AAAAAAATTCAACTCAACTC+TGG + chr4_1:50767531-50767550 Msa0553520:intron 25.0%
!!! TATTTTTGACTTGACAGAAT+TGG - chr4_1:50767659-50767678 None:intergenic 25.0%
! ATAATCACCAAGGAAAAAAT+TGG + chr4_1:50767724-50767743 Msa0553520:intron 25.0%
! TAATCACCAAGGAAAAAATT+GGG + chr4_1:50767725-50767744 Msa0553520:intron 25.0%
! TGCCCTAGTTAAATTATAAT+TGG - chr4_1:50767847-50767866 None:intergenic 25.0%
!! ATAATTTAACTAGGGCATTA+TGG + chr4_1:50767850-50767869 Msa0553520:intron 25.0%
!! TAATTTAACTAGGGCATTAT+GGG + chr4_1:50767851-50767870 Msa0553520:intron 25.0%
!!! TTTTGAAGAGGAATCTATAT+AGG + chr4_1:50767987-50768006 Msa0553520:intron 25.0%
! ATGGATATTAAGAAAAGATG+TGG + chr4_1:50768059-50768078 Msa0553520:intron 25.0%
!!! ACAGAGGAAGTATTAATAAA+GGG + chr4_1:50768461-50768480 Msa0553520:intron 25.0%
!! GTATTAATAAAGGGTATAGT+TGG + chr4_1:50768470-50768489 Msa0553520:intron 25.0%
! ATAAAAATATGCAAGGTTTG+AGG + chr4_1:50768732-50768751 Msa0553520:intron 25.0%
!!! TTTTTCTTTTGGTATTGACT+GGG - chr4_1:50768764-50768783 None:intergenic 25.0%
!!! TTTTTTCTTTTGGTATTGAC+TGG - chr4_1:50768765-50768784 None:intergenic 25.0%
! AAGAAAAAAAAGGAATAGAG+GGG + chr4_1:50768776-50768795 Msa0553520:intron 25.0%
!!! AGTATTGATATTTGTAGAGT+TGG + chr4_1:50768804-50768823 Msa0553520:intron 25.0%
!! GTATTGATATTTGTAGAGTT+GGG + chr4_1:50768805-50768824 Msa0553520:intron 25.0%
!!! TGTTATTAAATTTTGGTGGT+TGG + chr4_1:50768929-50768948 Msa0553520:intron 25.0%
!!! AACCATTTTTTGACAACTTT+TGG + chr4_1:50769012-50769031 Msa0553520:intron 25.0%
! CATTACTCTAACCTAATTTA+TGG + chr4_1:50769170-50769189 Msa0553520:intron 25.0%
! GATAAAAAGAACTCTTATGA+AGG - chr4_1:50769450-50769469 None:intergenic 25.0%
!! TTCTTTTTATCTCAATTCTC+AGG + chr4_1:50769459-50769478 Msa0553520:intron 25.0%
! TTAAACGTTAACTAAGTGAT+TGG + chr4_1:50769532-50769551 Msa0553520:intron 25.0%
! TTTCCAAAAGAACTATCATT+TGG + chr4_1:50770095-50770114 Msa0553520:intron 25.0%
!! TAACTTACAAACCGTATTTT+GGG - chr4_1:50770272-50770291 None:intergenic 25.0%
!! TTAACTTACAAACCGTATTT+TGG - chr4_1:50770273-50770292 None:intergenic 25.0%
! ATTTATGATACGTGATGATT+AGG - chr4_1:50770467-50770486 None:intergenic 25.0%
! TAATCATCACGTATCATAAA+TGG + chr4_1:50770466-50770485 Msa0553520:intron 25.0%
! ATTGTAATTTCATCTAACAC+TGG - chr4_1:50770524-50770543 None:intergenic 25.0%
!!! TAGTTGATACATAACTTTTC+AGG + chr4_1:50770636-50770655 Msa0553520:intron 25.0%
!!! AGTTGATACATAACTTTTCA+GGG + chr4_1:50770637-50770656 Msa0553520:intron 25.0%
! AAATGTCTAAATGTTGTTAC+AGG + chr4_1:50770667-50770686 Msa0553520:intron 25.0%
! TTAATTGATGTTGAAACTTC+AGG + chr4_1:50770833-50770852 Msa0553520:intron 25.0%
!!! TTATTTTGGTGAAGCTAAAA+TGG + chr4_1:50771286-50771305 Msa0553520:CDS 25.0%
!! TCGAGGTATAAATACATTTT+TGG + chr4_1:50771312-50771331 Msa0553520:intron 25.0%
! AATTCTAAACATATGCTTTG+AGG + chr4_1:50771734-50771753 Msa0553520:intron 25.0%
! ATTATATACTCATCCTACTT+AGG + chr4_1:50771770-50771789 Msa0553520:intron 25.0%
!! AATTTGGAACATCCTAATAA+GGG - chr4_1:50772086-50772105 None:intergenic 25.0%
! CAGTTGAATTATATGTAATG+AGG - chr4_1:50772253-50772272 None:intergenic 25.0%
! AAAGATTATCCTAAGGATTT+CGG - chr4_1:50772290-50772309 None:intergenic 25.0%
! GTTAATGATAAATGTACTAC+AGG + chr4_1:50772369-50772388 Msa0553520:intron 25.0%
! ATCATTGTATCTATATGTGT+TGG + chr4_1:50772523-50772542 Msa0553520:CDS 25.0%
!!! GGAACTATCTATTTTGATAT+TGG + chr4_1:50772544-50772563 Msa0553520:CDS 25.0%
!!! ATCTATTTTGATATTGGCTA+CGG + chr4_1:50772550-50772569 Msa0553520:CDS 25.0%
! TTTATGACTTTCATGTCAAT+TGG + chr4_1:50772622-50772641 Msa0553520:CDS 25.0%
!! GATAGTTTTCATCAATACTT+TGG + chr4_1:50772742-50772761 Msa0553520:intron 25.0%
! AATCTCACAAGTATTTATAC+TGG - chr4_1:50772825-50772844 None:intergenic 25.0%
! TAAATACTTGTGAGATTGTT+TGG + chr4_1:50772828-50772847 Msa0553520:intron 25.0%
! CTTATTTCCATAAAATCTCT+AGG + chr4_1:50772894-50772913 Msa0553520:intron 25.0%
! TACAATCAAAGTTGAAATGA+AGG - chr4_1:50773174-50773193 None:intergenic 25.0%
! TGAATAAACACATATCTTAC+AGG - chr4_1:50773218-50773237 None:intergenic 25.0%
! ATCAACAAAAACATCATAAG+CGG - chr4_1:50773246-50773265 None:intergenic 25.0%
!! TTTGTTGATATATCTGAAAC+AGG + chr4_1:50773257-50773276 Msa0553520:intron 25.0%
! GAAAGAATGAATGGATATTA+TGG + chr4_1:50773291-50773310 Msa0553520:CDS 25.0%
! GGAATCATTGTAAGAAAAAA+TGG + chr4_1:50773543-50773562 Msa0553520:intron 25.0%
! ATATGAAAAATTAACGCATG+TGG - chr4_1:50773600-50773619 None:intergenic 25.0%
! CCAATTTCATATATCAGTTA+CGG + chr4_1:50773708-50773727 Msa0553520:CDS 25.0%
!!! GATTTTGACTAAACTGATTA+TGG + chr4_1:50773798-50773817 Msa0553520:intron 25.0%
! TCTGTTGAACAATAAATTTG+AGG + chr4_1:50773874-50773893 Msa0553520:intron 25.0%
!! TGATTTTACAGGTATAGAAT+TGG - chr4_1:50773986-50774005 None:intergenic 25.0%
!!! GGAAGAAAAATTGATTTTAC+AGG - chr4_1:50773997-50774016 None:intergenic 25.0%
!! AAACATACACTAATTGATTC+CGG + chr4_1:50774032-50774051 Msa0553520:intron 25.0%
! ATGTTTGTCATCAATAAAGA+TGG - chr4_1:50774317-50774336 None:intergenic 25.0%
!! CATATTAATTAGCATTGAGA+TGG - chr4_1:50774627-50774646 None:intergenic 25.0%
! ATTAATATGAATTTGGATGC+AGG + chr4_1:50774638-50774657 Msa0553520:intron 25.0%
! TTAATATGAATTTGGATGCA+GGG + chr4_1:50774639-50774658 Msa0553520:intron 25.0%
!! GCAGTAAGTTTTCTATATAA+TGG - chr4_1:50774870-50774889 None:intergenic 25.0%
!!! TTCTTCGTAATTGTTTTTCT+AGG - chr4_1:50775021-50775040 None:intergenic 25.0%
! GTTATATAATTGAATTCTGC+TGG + chr4_1:50775055-50775074 Msa0553520:three_prime_UTR 25.0%
! ATGGGAGAGTTTAATGTTTT+GGG - chr4_1:50766706-50766725 None:intergenic 30.0%
TATGAAGAGAGAGAAAAGAT+GGG - chr4_1:50766724-50766743 None:intergenic 30.0%
TTATGAAGAGAGAGAAAAGA+TGG - chr4_1:50766725-50766744 None:intergenic 30.0%
TTCCATGTAACTGTTTGATT+AGG + chr4_1:50766748-50766767 Msa0553520:five_prime_UTR 30.0%
TACCTAATCAAACAGTTACA+TGG - chr4_1:50766753-50766772 None:intergenic 30.0%
TTGATTAGGTACAGCATTAA+TGG + chr4_1:50766762-50766781 Msa0553520:five_prime_UTR 30.0%
TTCAAATCCACATAACAACA+TGG + chr4_1:50766895-50766914 Msa0553520:exon 30.0%
! AGAGTTATGTTGCCAAATTT+TGG + chr4_1:50767028-50767047 Msa0553520:CDS 30.0%
! GAGTTATGTTGCCAAATTTT+GGG + chr4_1:50767029-50767048 Msa0553520:CDS 30.0%
TGATGGTTTCTCACTATATA+TGG + chr4_1:50767348-50767367 Msa0553520:intron 30.0%
GTACTTCTAAATAATCACCA+AGG + chr4_1:50767714-50767733 Msa0553520:intron 30.0%
AATCACCAAGGAAAAAATTG+GGG + chr4_1:50767726-50767745 Msa0553520:intron 30.0%
!!! ATAAACCCCAATTTTTTCCT+TGG - chr4_1:50767734-50767753 None:intergenic 30.0%
CATTATTTGCAACTGTATAG+TGG - chr4_1:50767807-50767826 None:intergenic 30.0%
TACAGTTGCAAATAATGAAG+TGG + chr4_1:50767810-50767829 Msa0553520:intron 30.0%
ATCCTATATTAAAGGATGGA+GGG - chr4_1:50768024-50768043 None:intergenic 30.0%
AATCCTATATTAAAGGATGG+AGG - chr4_1:50768025-50768044 None:intergenic 30.0%
AAAACGTCATATAATTTGGG+CGG - chr4_1:50768198-50768217 None:intergenic 30.0%
CCCAAAACGTCATATAATTT+GGG - chr4_1:50768201-50768220 None:intergenic 30.0%
! CCCAAATTATATGACGTTTT+GGG + chr4_1:50768198-50768217 Msa0553520:intron 30.0%
ACCCAAAACGTCATATAATT+TGG - chr4_1:50768202-50768221 None:intergenic 30.0%
! TCAAATTATAAGTCGCTTTG+AGG - chr4_1:50768439-50768458 None:intergenic 30.0%
TCAAAGCGACTTATAATTTG+AGG + chr4_1:50768438-50768457 Msa0553520:intron 30.0%
!! GACAGAGGAAGTATTAATAA+AGG + chr4_1:50768460-50768479 Msa0553520:intron 30.0%
GTCCAAAAGTTGTCAAAAAA+TGG - chr4_1:50769017-50769036 None:intergenic 30.0%
AAAACAATGGAGAGAGAAAA+AGG - chr4_1:50769084-50769103 None:intergenic 30.0%
!! TTATGGATTTTGAAAAGGGT+AGG + chr4_1:50769187-50769206 Msa0553520:intron 30.0%
!! ACTTGAGTCTGATTTTTAAG+TGG + chr4_1:50769602-50769621 Msa0553520:intron 30.0%
!!! TTGTAATGATTTTTTGGCGT+CGG + chr4_1:50769725-50769744 Msa0553520:intron 30.0%
! TGTCCAAATGATAGTTCTTT+TGG - chr4_1:50770101-50770120 None:intergenic 30.0%
TTATCAACTTACGGTGAAAA+GGG - chr4_1:50770312-50770331 None:intergenic 30.0%
ATTATCAACTTACGGTGAAA+AGG - chr4_1:50770313-50770332 None:intergenic 30.0%
AAATGAGAAGACAAAAACCA+TGG - chr4_1:50770416-50770435 None:intergenic 30.0%
TTCTCATTTGCACTAGTAAT+GGG + chr4_1:50770427-50770446 Msa0553520:intron 30.0%
ATCAACTAGCAAATTGCATA+TGG - chr4_1:50770624-50770643 None:intergenic 30.0%
GCAAAAAATGTTGTAATGAC+AGG + chr4_1:50770697-50770716 Msa0553520:CDS 30.0%
! ACAAACTCTTTCTTTTGTTG+AGG + chr4_1:50770783-50770802 Msa0553520:intron 30.0%
TGATGCAACAATCATTGAAA+TGG + chr4_1:50770974-50770993 Msa0553520:CDS 30.0%
GATGCAACAATCATTGAAAT+GGG + chr4_1:50770975-50770994 Msa0553520:CDS 30.0%
TTGATATGTTTCAGATACTC+AGG - chr4_1:50771461-50771480 None:intergenic 30.0%
ATTCATACAATATTGACACG+TGG + chr4_1:50771489-50771508 Msa0553520:intron 30.0%
CTGAAATTGTTGAACAAATG+AGG - chr4_1:50771985-50772004 None:intergenic 30.0%
TCAGAAACAACTTATACCTT+AGG + chr4_1:50772001-50772020 Msa0553520:intron 30.0%
ACAAACAAATCCATGTCAAT+AGG - chr4_1:50772050-50772069 None:intergenic 30.0%
! ATTTGGAACATCCTAATAAG+GGG - chr4_1:50772085-50772104 None:intergenic 30.0%
! GAATTTGGAACATCCTAATA+AGG - chr4_1:50772087-50772106 None:intergenic 30.0%
GACAGAAAAAGATTATCCTA+AGG - chr4_1:50772297-50772316 None:intergenic 30.0%
ATGATAAATGTACTACAGGA+AGG + chr4_1:50772373-50772392 Msa0553520:intron 30.0%
TGATAAATGTACTACAGGAA+GGG + chr4_1:50772374-50772393 Msa0553520:intron 30.0%
! ATCAATACTTTGGAAGTGTA+TGG + chr4_1:50772752-50772771 Msa0553520:intron 30.0%
AAGACTTATACTAGTGCTTA+TGG - chr4_1:50773039-50773058 None:intergenic 30.0%
TAAGCACTAGTATAAGTCTT+TGG + chr4_1:50773039-50773058 Msa0553520:intron 30.0%
ACAGGAACTTATGTATAAGT+TGG - chr4_1:50773200-50773219 None:intergenic 30.0%
TTGCACAATCACATATAACA+TGG + chr4_1:50773383-50773402 Msa0553520:CDS 30.0%
CATATAACATGGTGAAATTC+AGG + chr4_1:50773394-50773413 Msa0553520:CDS 30.0%
! ACTTGTTCCAAATTTTCTCA+TGG + chr4_1:50773503-50773522 Msa0553520:CDS 30.0%
! CTTGTTCCAAATTTTCTCAT+GGG + chr4_1:50773504-50773523 Msa0553520:CDS 30.0%
ATGATTCCCATGAGAAAATT+TGG - chr4_1:50773513-50773532 None:intergenic 30.0%
! TATATTGTTGTTGTTCATGC+AGG + chr4_1:50773617-50773636 Msa0553520:intron 30.0%
! ATATTGTTGTTGTTCATGCA+GGG + chr4_1:50773618-50773637 Msa0553520:intron 30.0%
CCGTAACTGATATATGAAAT+TGG - chr4_1:50773711-50773730 None:intergenic 30.0%
!! AGAATTGGTATTGACATGTT+TGG - chr4_1:50773971-50773990 None:intergenic 30.0%
!! TGTTACTTTAGTCTCAAGTA+TGG - chr4_1:50774114-50774133 None:intergenic 30.0%
ATGCTCTATGTATAATAGCA+CGG + chr4_1:50774234-50774253 Msa0553520:intron 30.0%
TCAATAAAGATGGAAGTGAT+TGG - chr4_1:50774307-50774326 None:intergenic 30.0%
ATATGTGATAACACACATGT+TGG + chr4_1:50774734-50774753 Msa0553520:CDS 30.0%
TATGTGATAACACACATGTT+GGG + chr4_1:50774735-50774754 Msa0553520:CDS 30.0%
ATATCCTGTAACATAAGAGA+AGG - chr4_1:50774809-50774828 None:intergenic 30.0%
!!! TTTTGTTGTTCTCAAGTTCA+AGG + chr4_1:50774833-50774852 Msa0553520:CDS 30.0%
GAAAAACAATTACGAAGAAG+AGG + chr4_1:50775022-50775041 Msa0553520:exon 30.0%
! GATGGGAGAGTTTAATGTTT+TGG - chr4_1:50766707-50766726 None:intergenic 35.0%
TCAATCTCCATGTTGTTATG+TGG - chr4_1:50766905-50766924 None:intergenic 35.0%
! AGTGATGAAGAAGCATATTG+TGG + chr4_1:50766968-50766987 Msa0553520:CDS 35.0%
! GCATATTGTGGTCTTAATAG+AGG + chr4_1:50766980-50766999 Msa0553520:CDS 35.0%
ATAGAGGAAGTTTCTTAGCA+TGG + chr4_1:50766996-50767015 Msa0553520:CDS 35.0%
TAGAGGAAGTTTCTTAGCAT+GGG + chr4_1:50766997-50767016 Msa0553520:CDS 35.0%
!! ATGTTGCCAAATTTTGGGAA+AGG + chr4_1:50767034-50767053 Msa0553520:CDS 35.0%
! CCATTAAGCAACCTTTTAGT+TGG - chr4_1:50767061-50767080 None:intergenic 35.0%
CCAACTAAAAGGTTGCTTAA+TGG + chr4_1:50767058-50767077 Msa0553520:CDS 35.0%
!! AGGTTGCTTAATGGACTAAA+TGG + chr4_1:50767067-50767086 Msa0553520:CDS 35.0%
ATAATAGCCATGATTCTACC+AGG - chr4_1:50767103-50767122 None:intergenic 35.0%
TGGTAGAATCATGGCTATTA+TGG + chr4_1:50767102-50767121 Msa0553520:CDS 35.0%
GGTAGAATCATGGCTATTAT+GGG + chr4_1:50767103-50767122 Msa0553520:CDS 35.0%
GCCCAAACATGAGTAAATTA+AGG + chr4_1:50767261-50767280 Msa0553520:intron 35.0%
TGGTTTCTCACTATATATGG+TGG + chr4_1:50767351-50767370 Msa0553520:intron 35.0%
AGACCAAGCCATTAAAACAA+GGG - chr4_1:50767574-50767593 None:intergenic 35.0%
! TTGACTTGACAGAATTGGTT+CGG - chr4_1:50767654-50767673 None:intergenic 35.0%
! TTTGCAACTGTATAGTGGAA+AGG - chr4_1:50767802-50767821 None:intergenic 35.0%
CTCATATTAGAGAACACGAA+AGG + chr4_1:50767926-50767945 Msa0553520:intron 35.0%
!!! GGGACATGTTTATTTTGAAG+AGG + chr4_1:50767975-50767994 Msa0553520:intron 35.0%
TATATTAAAGGATGGAGGGA+GGG - chr4_1:50768020-50768039 None:intergenic 35.0%
! GCCCAAATTATATGACGTTT+TGG + chr4_1:50768197-50768216 Msa0553520:intron 35.0%
GACTTATAATTTGAGGACAG+AGG + chr4_1:50768445-50768464 Msa0553520:intron 35.0%
AGAGAGAAAAAGGAAGAGAA+AGG - chr4_1:50769074-50769093 None:intergenic 35.0%
TTCAATGAGCATGTGAATCT+AGG + chr4_1:50769210-50769229 Msa0553520:intron 35.0%
ACAGCGAGGTAAGTAAAATT+TGG - chr4_1:50769640-50769659 None:intergenic 35.0%
TGTAATTATACAGTGACCGT+TGG - chr4_1:50769959-50769978 None:intergenic 35.0%
TTGTTTATGGCACGTTTAGT+TGG - chr4_1:50770027-50770046 None:intergenic 35.0%
AAACGTGCCATAAACAAAGT+TGG + chr4_1:50770030-50770049 Msa0553520:intron 35.0%
! CACAATGCCAACTTTGTTTA+TGG - chr4_1:50770040-50770059 None:intergenic 35.0%
TAGTCATGTTGCCCAAAATA+CGG + chr4_1:50770258-50770277 Msa0553520:intron 35.0%
TGAAAAGGGAACACAATTCA+TGG - chr4_1:50770298-50770317 None:intergenic 35.0%
!! TAGGGCATTAAAGTGTGTTT+TGG - chr4_1:50770377-50770396 None:intergenic 35.0%
AAACACACTTTAATGCCCTA+TGG + chr4_1:50770377-50770396 Msa0553520:intron 35.0%
CTTCTCATTTGCACTAGTAA+TGG + chr4_1:50770426-50770445 Msa0553520:intron 35.0%
TACGTGATGATTAGGTGAAA+AGG - chr4_1:50770459-50770478 None:intergenic 35.0%
ACAGGAAATGTTCTTCTCAA+TGG + chr4_1:50770715-50770734 Msa0553520:CDS 35.0%
CAGGAAATGTTCTTCTCAAT+GGG + chr4_1:50770716-50770735 Msa0553520:CDS 35.0%
AATGGGAAGAAAAAAACTCC+AGG + chr4_1:50770733-50770752 Msa0553520:CDS 35.0%
AAGAAAAAAACTCCAGGCTA+TGG + chr4_1:50770739-50770758 Msa0553520:CDS 35.0%
TCTTCTTTGGACATTGTTGA+TGG - chr4_1:50770939-50770958 None:intergenic 35.0%
ATGTCCAAAGAAGAAATCAG+CGG + chr4_1:50770945-50770964 Msa0553520:CDS 35.0%
CAGATAGGTTAATAGGTAAC+TGG + chr4_1:50771012-50771031 Msa0553520:CDS 35.0%
AAGTCCTTCTCAAAATGTGA+GGG - chr4_1:50771396-50771415 None:intergenic 35.0%
! GATTTCTTTTACGTGGACAA+GGG - chr4_1:50771618-50771637 None:intergenic 35.0%
! TCAGAAGGATTTCTTTTACG+TGG - chr4_1:50771625-50771644 None:intergenic 35.0%
CATCTTAGGAAATGATCAGA+AGG - chr4_1:50771640-50771659 None:intergenic 35.0%
AGTCAGAATTGATGCATCTT+AGG - chr4_1:50771654-50771673 None:intergenic 35.0%
TTCTGACTTTGACGTTGTAA+CGG + chr4_1:50771666-50771685 Msa0553520:CDS 35.0%
TCTTGCAAAAGATCCTAAGT+AGG - chr4_1:50771786-50771805 None:intergenic 35.0%
TCAATATCGTGTAAGACCTA+AGG - chr4_1:50772020-50772039 None:intergenic 35.0%
TGAACAAACACCTATTGACA+TGG + chr4_1:50772037-50772056 Msa0553520:intron 35.0%
!!! TCACTTTTTTCCCCCTTATT+AGG + chr4_1:50772071-50772090 Msa0553520:intron 35.0%
! TTTGGAACATCCTAATAAGG+GGG - chr4_1:50772084-50772103 None:intergenic 35.0%
ATGAAAGGATCTGCTGAATT+TGG - chr4_1:50772102-50772121 None:intergenic 35.0%
AGCAGATCCTTTCATGAATT+TGG + chr4_1:50772107-50772126 Msa0553520:CDS 35.0%
! TTTTCTGTCAGTATAGTAGC+CGG + chr4_1:50772308-50772327 Msa0553520:intron 35.0%
AATATTATGAAGGACCGACA+AGG - chr4_1:50772343-50772362 None:intergenic 35.0%
CTTGAAACTGAGATAAACCT+TGG + chr4_1:50772397-50772416 Msa0553520:CDS 35.0%
ATGACTTTCATGTCAATTGG+AGG + chr4_1:50772625-50772644 Msa0553520:CDS 35.0%
! ACGCTATCCTAGAGATTTTA+TGG - chr4_1:50772904-50772923 None:intergenic 35.0%
!! AAAATCTCTAGGATAGCGTA+TGG + chr4_1:50772905-50772924 Msa0553520:intron 35.0%
TATACTAGTGCTTATGGCAT+CGG - chr4_1:50773033-50773052 None:intergenic 35.0%
TTTCTCATGGGAATCATTAC+AGG + chr4_1:50773516-50773535 Msa0553520:CDS 35.0%
ATATATCAGTTACGGTGCAT+GGG + chr4_1:50773716-50773735 Msa0553520:CDS 35.0%
! TGTATGTTTAGTTCGACTCT+TGG - chr4_1:50774021-50774040 None:intergenic 35.0%
CCTAACAAATTCAGTTCTTC+CGG - chr4_1:50774054-50774073 None:intergenic 35.0%
!! CAAGTATGGACTTGTTACTA+GGG - chr4_1:50774100-50774119 None:intergenic 35.0%
!! TCAAGTATGGACTTGTTACT+AGG - chr4_1:50774101-50774120 None:intergenic 35.0%
TATGTTCCTAGAAGTCGATT+TGG + chr4_1:50774347-50774366 Msa0553520:intron 35.0%
! AAATCTCCAAATCGACTTCT+AGG - chr4_1:50774356-50774375 None:intergenic 35.0%
!! TCATACAAGAATGACTTGCT+TGG + chr4_1:50774663-50774682 Msa0553520:CDS 35.0%
! CATATTCTCCTGTCAGTTTT+GGG - chr4_1:50774719-50774738 None:intergenic 35.0%
! ACATATTCTCCTGTCAGTTT+TGG - chr4_1:50774720-50774739 None:intergenic 35.0%
ATGTGATAACACACATGTTG+GGG + chr4_1:50774736-50774755 Msa0553520:CDS 35.0%
TTGAATTAAGCCATTCCAAG+TGG + chr4_1:50774760-50774779 Msa0553520:CDS 35.0%
! AAGCTGTTGTATGGTTCTTT+TGG - chr4_1:50774892-50774911 None:intergenic 35.0%
! TCTTTTCTCAAGCTGTTGTA+TGG - chr4_1:50774901-50774920 None:intergenic 35.0%
TTGAGAAAAGACCTTCTTTC+AGG + chr4_1:50774910-50774929 Msa0553520:CDS 35.0%
TTGAGAAGACAGTGAATGAA+GGG - chr4_1:50774973-50774992 None:intergenic 35.0%
!! CGTAATTGTTTTTCTAGGTG+TGG - chr4_1:50775016-50775035 None:intergenic 35.0%
TGGAACATTATTTGTGTCCT+TGG + chr4_1:50775198-50775217 Msa0553520:three_prime_UTR 35.0%
!! CATTAGGTTAGAGCTTTGTT+TGG + chr4_1:50775299-50775318 Msa0553520:three_prime_UTR 35.0%
GTTGGTCCTTTCCCAAAATT+TGG - chr4_1:50767043-50767062 None:intergenic 40.0%
TTGGGAAAGGACCAACTAAA+AGG + chr4_1:50767047-50767066 Msa0553520:CDS 40.0%
TGCAAGTGTATCAAGCAAAG+TGG - chr4_1:50767149-50767168 None:intergenic 40.0%
ACTTTGCTTGATACACTTGC+AGG + chr4_1:50767148-50767167 Msa0553520:CDS 40.0%
! TCCCTTTTGAGCTTTCTTTC+TGG + chr4_1:50767436-50767455 Msa0553520:intron 40.0%
CCCAGAAAGAAAGCTCAAAA+GGG - chr4_1:50767440-50767459 None:intergenic 40.0%
! CCCTTTTGAGCTTTCTTTCT+GGG + chr4_1:50767437-50767456 Msa0553520:intron 40.0%
TCCCAGAAAGAAAGCTCAAA+AGG - chr4_1:50767441-50767460 None:intergenic 40.0%
CAGACCAAGCCATTAAAACA+AGG - chr4_1:50767575-50767594 None:intergenic 40.0%
!!! TGTTTTAATGGCTTGGTCTG+TGG + chr4_1:50767575-50767594 Msa0553520:intron 40.0%
! TGACTTGACAGAATTGGTTC+GGG - chr4_1:50767653-50767672 None:intergenic 40.0%
! GTATAGTGGAAAGGTCACTA+AGG - chr4_1:50767793-50767812 None:intergenic 40.0%
CTATATTAAAGGATGGAGGG+AGG - chr4_1:50768021-50768040 None:intergenic 40.0%
CTCCCTCCATCCTTTAATAT+AGG + chr4_1:50768019-50768038 Msa0553520:intron 40.0%
TGTAGAGTTGGGTAACAAAG+TGG + chr4_1:50768816-50768835 Msa0553520:intron 40.0%
AATGGCAGCTGTCAAAGATT+TGG - chr4_1:50768876-50768895 None:intergenic 40.0%
GATGATTCCTCTTTAGCACA+AGG + chr4_1:50769907-50769926 Msa0553520:intron 40.0%
TAGTACACCTTGTGCTAAAG+AGG - chr4_1:50769917-50769936 None:intergenic 40.0%
TAGCACAAGGTGTACTAAAG+AGG + chr4_1:50769920-50769939 Msa0553520:intron 40.0%
TCAATGCCCAGACAAAGTAA+CGG + chr4_1:50769992-50770011 Msa0553520:intron 40.0%
TTTATGGCACGTTTAGTTGG+TGG - chr4_1:50770024-50770043 None:intergenic 40.0%
CTTACAACAAAACCATAGCC+TGG - chr4_1:50770754-50770773 None:intergenic 40.0%
! ACGCAAGAAGATGTGTTGTT+AGG + chr4_1:50770864-50770883 Msa0553520:CDS 40.0%
!! TAAGCCGCTGATTTCTTCTT+TGG - chr4_1:50770952-50770971 None:intergenic 40.0%
TTAACCTATCTGCACAGTCA+TGG - chr4_1:50771004-50771023 None:intergenic 40.0%
GACTGTGCAGATAGGTTAAT+AGG + chr4_1:50771005-50771024 Msa0553520:CDS 40.0%
ATAGGTAACTGGCATTTGAG+AGG + chr4_1:50771023-50771042 Msa0553520:CDS 40.0%
! TGGCATTTGAGAGGTATAAG+TGG + chr4_1:50771032-50771051 Msa0553520:CDS 40.0%
! CATTTGAGAGGTATAAGTGG+TGG + chr4_1:50771035-50771054 Msa0553520:CDS 40.0%
TTGCACTTGAGATTCTCACA+AGG + chr4_1:50771078-50771097 Msa0553520:CDS 40.0%
CTTAGAAATTGTGCTCGTGA+TGG + chr4_1:50771173-50771192 Msa0553520:CDS 40.0%
! GATGATCTTTTCTTGCTCTC+TGG + chr4_1:50771251-50771270 Msa0553520:CDS 40.0%
! GGTGGCGAAACTGTTTATTT+TGG + chr4_1:50771272-50771291 Msa0553520:CDS 40.0%
TGAAGCTAAAATGGCAATCG+AGG + chr4_1:50771295-50771314 Msa0553520:CDS 40.0%
!! GATACCCTCACATTTTGAGA+AGG + chr4_1:50771389-50771408 Msa0553520:intron 40.0%
CAAGTCCTTCTCAAAATGTG+AGG - chr4_1:50771397-50771416 None:intergenic 40.0%
! GGATTTCTTTTACGTGGACA+AGG - chr4_1:50771619-50771638 None:intergenic 40.0%
GCTGTAGCCAAATTCATGAA+AGG - chr4_1:50772117-50772136 None:intergenic 40.0%
TTATCCTAAGGATTTCGGCT+TGG - chr4_1:50772285-50772304 None:intergenic 40.0%
AGCAACTCAAAACACTGACA+AGG + chr4_1:50772440-50772459 Msa0553520:CDS 40.0%
GTGAACATGTGTAGAGATGT+TGG + chr4_1:50772472-50772491 Msa0553520:CDS 40.0%
! GTAGAGATGTTGGTTACTAC+TGG + chr4_1:50772482-50772501 Msa0553520:CDS 40.0%
TCCTGATATAAATGCACCAC+AGG - chr4_1:50772602-50772621 None:intergenic 40.0%
! AGAACTTGTTTGAGTCTCTC+TGG + chr4_1:50772776-50772795 Msa0553520:intron 40.0%
! CTTATGGCATCGGATTTGTT+CGG - chr4_1:50773023-50773042 None:intergenic 40.0%
TCTTTCATCATTCCCGTTCT+TGG + chr4_1:50773341-50773360 Msa0553520:CDS 40.0%
AGAGCAATAGCAACCAAGAA+CGG - chr4_1:50773357-50773376 None:intergenic 40.0%
AACGCATAGTGAATGAATCC+TGG - chr4_1:50773420-50773439 None:intergenic 40.0%
AGTGATTGAGAGTCTCATGA+TGG + chr4_1:50773470-50773489 Msa0553520:CDS 40.0%
TGATGACCTCTGGATTCTTT+AGG + chr4_1:50773649-50773668 Msa0553520:CDS 40.0%
TAGCAACCTAAAGAATCCAG+AGG - chr4_1:50773658-50773677 None:intergenic 40.0%
CTGATCTTCCAAAACCTGTT+TGG + chr4_1:50773679-50773698 Msa0553520:CDS 40.0%
CATATATCAGTTACGGTGCA+TGG + chr4_1:50773715-50773734 Msa0553520:CDS 40.0%
TTCTCGTTGATACCAAGTGT+CGG + chr4_1:50773751-50773770 Msa0553520:intron 40.0%
! ATGTTTAGTTCGACTCTTGG+AGG - chr4_1:50774018-50774037 None:intergenic 40.0%
! CCGGAAGAACTGAATTTGTT+AGG + chr4_1:50774051-50774070 Msa0553520:intron 40.0%
!! TGACACATAAGCACTGATGT+TGG - chr4_1:50774582-50774601 None:intergenic 40.0%
ATTGAGATGGACACTAACAC+CGG - chr4_1:50774614-50774633 None:intergenic 40.0%
AATTAAGCCATTCCAAGTGG+TGG + chr4_1:50774763-50774782 Msa0553520:CDS 40.0%
ATTAAGCCATTCCAAGTGGT+GGG + chr4_1:50774764-50774783 Msa0553520:CDS 40.0%
TCCTCCTTCTCTTATGTTAC+AGG + chr4_1:50774802-50774821 Msa0553520:CDS 40.0%
TCCTGTAACATAAGAGAAGG+AGG - chr4_1:50774806-50774825 None:intergenic 40.0%
! GATGGCATTTTCCTGAAAGA+AGG - chr4_1:50774924-50774943 None:intergenic 40.0%
TGAGAAGACAGTGAATGAAG+GGG - chr4_1:50774972-50774991 None:intergenic 40.0%
CTTGAGAAGACAGTGAATGA+AGG - chr4_1:50774974-50774993 None:intergenic 40.0%
TCATTCACTGTCTTCTCAAG+AGG + chr4_1:50774974-50774993 Msa0553520:CDS 40.0%
CATTCACTGTCTTCTCAAGA+GGG + chr4_1:50774975-50774994 Msa0553520:CDS 40.0%
!! TTGTTTTTCTAGGTGTGGAG+TGG - chr4_1:50775011-50775030 None:intergenic 40.0%
AACCTAATGCTGATAAGGCT+AGG - chr4_1:50775288-50775307 None:intergenic 40.0%
GCTCTAACCTAATGCTGATA+AGG - chr4_1:50775293-50775312 None:intergenic 40.0%
ATGGAGATTGAAGCAGCAAG+TGG + chr4_1:50766914-50766933 Msa0553520:CDS 45.0%
GCAAGTGGTAGCAACAACAA+AGG + chr4_1:50766929-50766948 Msa0553520:CDS 45.0%
!! CTAAATGGTTTTGCTGAGCC+TGG + chr4_1:50767082-50767101 Msa0553520:CDS 45.0%
ATGGCTATTATGGGTCCTTC+TGG + chr4_1:50767112-50767131 Msa0553520:CDS 45.0%
ACTCTGGTGACACTAACCTA+AGG + chr4_1:50767547-50767566 Msa0553520:intron 45.0%
CTCTGGTGACACTAACCTAA+GGG + chr4_1:50767548-50767567 Msa0553520:intron 45.0%
CCATTAAAACAAGGGCCCTT+AGG - chr4_1:50767566-50767585 None:intergenic 45.0%
!!! CCTAAGGGCCCTTGTTTTAA+TGG + chr4_1:50767563-50767582 Msa0553520:intron 45.0%
!! TTTAATGGCTTGGTCTGTGG+TGG + chr4_1:50767578-50767597 Msa0553520:intron 45.0%
!! TTAATGGCTTGGTCTGTGGT+GGG + chr4_1:50767579-50767598 Msa0553520:intron 45.0%
!! TTGACAGAATTGGTTCGGGA+TGG - chr4_1:50767649-50767668 None:intergenic 45.0%
AGAGTTGGGTAACAAAGTGG+CGG + chr4_1:50768819-50768838 Msa0553520:intron 45.0%
GGTGGTTGGAATTGTGAGAT+TGG + chr4_1:50768943-50768962 Msa0553520:intron 45.0%
TAATCCAGAGTTTGACAGCG+AGG - chr4_1:50769654-50769673 None:intergenic 45.0%
!! ACAGTGACCGTTGGTTCTTT+GGG - chr4_1:50769950-50769969 None:intergenic 45.0%
!! TACAGTGACCGTTGGTTCTT+TGG - chr4_1:50769951-50769970 None:intergenic 45.0%
CAATGCCCAGACAAAGTAAC+GGG + chr4_1:50769993-50770012 Msa0553520:intron 45.0%
TTGAGATTCTCACAAGGCCT+CGG + chr4_1:50771084-50771103 Msa0553520:CDS 45.0%
TCATCAAGGAACAGTAACCG+AGG - chr4_1:50771104-50771123 None:intergenic 45.0%
TTCCTTGATGAACCGACTAG+TGG + chr4_1:50771113-50771132 Msa0553520:CDS 45.0%
! AACCACTAGTCGGTTCATCA+AGG - chr4_1:50771118-50771137 None:intergenic 45.0%
TGATGAACCGACTAGTGGTT+TGG + chr4_1:50771118-50771137 Msa0553520:CDS 45.0%
! GAAATTGTGCTCGTGATGGA+AGG + chr4_1:50771177-50771196 Msa0553520:CDS 45.0%
! GATCTTTTCTTGCTCTCTGG+TGG + chr4_1:50771254-50771273 Msa0553520:CDS 45.0%
!!! GTGCAGTTTTTTGCTGAAGC+CGG + chr4_1:50771589-50771608 Msa0553520:intron 45.0%
TTTACGTGGACAAGGGAAAC+CGG - chr4_1:50771611-50771630 None:intergenic 45.0%
GTTGTAACGGCTACACTGAA+GGG + chr4_1:50771679-50771698 Msa0553520:CDS 45.0%
CTACACTGAAGGGATCTCAA+AGG + chr4_1:50771689-50771708 Msa0553520:CDS 45.0%
TATGCCAAGCCGAAATCCTT+AGG + chr4_1:50772278-50772297 Msa0553520:intron 45.0%
! ATGTTGGTTACTACTGGCTG+AGG + chr4_1:50772488-50772507 Msa0553520:CDS 45.0%
GCCTGTGGTGCATTTATATC+AGG + chr4_1:50772598-50772617 Msa0553520:CDS 45.0%
GAGCAATAGCAACCAAGAAC+GGG - chr4_1:50773356-50773375 None:intergenic 45.0%
AACATGGTGAAATTCAGGCC+AGG + chr4_1:50773399-50773418 Msa0553520:CDS 45.0%
ATGGGAATCATTACAGGAGC+TGG + chr4_1:50773522-50773541 Msa0553520:CDS 45.0%
ACGCATGTGGATCATGTAGT+TGG - chr4_1:50773587-50773606 None:intergenic 45.0%
! GGAATCATGATGATGACCTC+TGG + chr4_1:50773639-50773658 Msa0553520:CDS 45.0%
GAAATTGGATAGCGCCAAAC+AGG - chr4_1:50773696-50773715 None:intergenic 45.0%
!! GTTGATACCAAGTGTCGGTT+TGG + chr4_1:50773756-50773775 Msa0553520:intron 45.0%
CACAAAACCAAACCGACACT+TGG - chr4_1:50773766-50773785 None:intergenic 45.0%
!!! CAAGTGTCGGTTTGGTTTTG+TGG + chr4_1:50773764-50773783 Msa0553520:intron 45.0%
TTATGTGTCAGTGTCGTGTC+CGG + chr4_1:50774592-50774611 Msa0553520:intron 45.0%
!!! CTGTCAGTTTTGGGTTACCT+GGG - chr4_1:50774710-50774729 None:intergenic 45.0%
TGCCATCTGTTACTACTTCC+AGG + chr4_1:50774937-50774956 Msa0553520:CDS 45.0%
CTCCTGGAAGTAGTAACAGA+TGG - chr4_1:50774942-50774961 None:intergenic 45.0%
CATCTGTTACTACTTCCAGG+AGG + chr4_1:50774940-50774959 Msa0553520:CDS 45.0%
!! GTCCTAGCCTTATCAGCATT+AGG + chr4_1:50775283-50775302 Msa0553520:three_prime_UTR 45.0%
TGCTGAGCCTGGTAGAATCA+TGG + chr4_1:50767093-50767112 Msa0553520:CDS 50.0%
!! ATTATGGGTCCTTCTGGCTC+TGG + chr4_1:50767118-50767137 Msa0553520:CDS 50.0%
! GTGGATTTTCCAGAGCCAGA+AGG - chr4_1:50767130-50767149 None:intergenic 50.0%
!!! GGGCCCTTGTTTTAATGGCT+TGG + chr4_1:50767568-50767587 Msa0553520:intron 50.0%
GTGAGCTTAGCTCAGTTGGT+TGG + chr4_1:50768702-50768721 Msa0553520:intron 50.0%
CTTACCTCGCTGTCAAACTC+TGG + chr4_1:50769647-50769666 Msa0553520:intron 50.0%
!! CAGTGACCGTTGGTTCTTTG+GGG - chr4_1:50769949-50769968 None:intergenic 50.0%
! TCGGACCCGTTACTTTGTCT+GGG - chr4_1:50770001-50770020 None:intergenic 50.0%
!! TGGCACGTTTAGTTGGTGGT+CGG - chr4_1:50770020-50770039 None:intergenic 50.0%
AAAAACCATGGTCCCCAGCA+CGG - chr4_1:50770404-50770423 None:intergenic 50.0%
GTCTCCATGACTGTGCAGAT+AGG + chr4_1:50770997-50771016 Msa0553520:CDS 50.0%
! GAGGTATAAGTGGTGGCGAA+AGG + chr4_1:50771042-50771061 Msa0553520:CDS 50.0%
GCACTGTCCAAACCACTAGT+CGG - chr4_1:50771128-50771147 None:intergenic 50.0%
AGTGCGAAGACTTCACTGCT+AGG - chr4_1:50771227-50771246 None:intergenic 50.0%
CGTTGTAACGGCTACACTGA+AGG + chr4_1:50771678-50771697 Msa0553520:CDS 50.0%
ATGAAGGACCGACAAGGACA+CGG - chr4_1:50772337-50772356 None:intergenic 50.0%
ACCTTGGAAGCCAAGCTAGT+TGG + chr4_1:50772413-50772432 Msa0553520:CDS 50.0%
! ACCAACTAGCTTGGCTTCCA+AGG - chr4_1:50772417-50772436 None:intergenic 50.0%
TTGGAAGCCAAGCTAGTTGG+TGG + chr4_1:50772416-50772435 Msa0553520:CDS 50.0%
GTTGCTTCCACCAACTAGCT+TGG - chr4_1:50772426-50772445 None:intergenic 50.0%
CTACGGCTACACTTCCATCT+TGG + chr4_1:50772567-50772586 Msa0553520:CDS 50.0%
! TACACTTCCATCTTGGCTCG+TGG + chr4_1:50772574-50772593 Msa0553520:CDS 50.0%
! GGATAGCGCCAAACAGGTTT+TGG - chr4_1:50773690-50773709 None:intergenic 50.0%
GAGTTTGATCCACTACTCCC+AGG + chr4_1:50774690-50774709 Msa0553520:CDS 50.0%
! TTTGGGTTACCTGGGAGTAG+TGG - chr4_1:50774702-50774721 None:intergenic 50.0%
!!! CCTGTCAGTTTTGGGTTACC+TGG - chr4_1:50774711-50774730 None:intergenic 50.0%
CCAGGTAACCCAAAACTGAC+AGG + chr4_1:50774708-50774727 Msa0553520:CDS 50.0%
CCAACTGAGCTAAGCTCACG+AGG - chr4_1:50768701-50768720 None:intergenic 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG + chr4_1:50768698-50768717 Msa0553520:intron 55.0%
AGGCCACCCCAAAGAACCAA+CGG + chr4_1:50769940-50769959 Msa0553520:intron 55.0%
!! TGACCGTTGGTTCTTTGGGG+TGG - chr4_1:50769946-50769965 None:intergenic 55.0%
! GTCGGACCCGTTACTTTGTC+TGG - chr4_1:50770002-50770021 None:intergenic 55.0%
AAAACCATGGTCCCCAGCAC+GGG - chr4_1:50770403-50770422 None:intergenic 55.0%
TTACGGTGCATGGGCGATAC+AGG + chr4_1:50773725-50773744 Msa0553520:CDS 55.0%
CCAAGTCCCACCACTTGGAA+TGG - chr4_1:50774773-50774792 None:intergenic 55.0%
! CCATTCCAAGTGGTGGGACT+TGG + chr4_1:50774770-50774789 Msa0553520:CDS 55.0%
!! ATGAAGGGGTTGATGCCTCC+TGG - chr4_1:50774958-50774977 None:intergenic 55.0%
TAATGCCCTATGGCCCGTGC+TGG + chr4_1:50770387-50770406 Msa0553520:intron 60.0%
AATGCCCTATGGCCCGTGCT+GGG + chr4_1:50770388-50770407 Msa0553520:intron 60.0%
ACCGACAAGGACACGGACAC+CGG - chr4_1:50772330-50772349 None:intergenic 60.0%
ACAGGCACCACGAGCCAAGA+TGG - chr4_1:50772584-50772603 None:intergenic 60.0%
! ATCTTGGCTCGTGGTGCCTG+TGG + chr4_1:50772583-50772602 Msa0553520:CDS 60.0%
TGCTGCCAAGTCCCACCACT+TGG - chr4_1:50774778-50774797 None:intergenic 60.0%
ATGCCCTATGGCCCGTGCTG+GGG + chr4_1:50770389-50770408 Msa0553520:intron 65.0%
GCCGGTGTCCGTGTCCTTGT+CGG + chr4_1:50772326-50772345 Msa0553520:intron 65.0%
GGTCCCCAGCACGGGCCATA+GGG - chr4_1:50770395-50770414 None:intergenic 70.0%
TGGTCCCCAGCACGGGCCAT+AGG - chr4_1:50770396-50770415 None:intergenic 70.0%
ATGGCCCGTGCTGGGGACCA+TGG + chr4_1:50770396-50770415 Msa0553520:intron 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 50766689 50775363 50766689 ID=Msa0553520;Name=Msa0553520
chr4_1 mRNA 50766689 50775363 50766689 ID=Msa0553520-mRNA-1;Parent=Msa0553520;Name=Msa0553520-mRNA-1;_AED=0.07;_eAED=0.07;_QI=225|1|1|1|1|1|9|341|693
chr4_1 exon 50766689 50767169 50766689 ID=Msa0553520-mRNA-1:exon:14337;Parent=Msa0553520-mRNA-1
chr4_1 exon 50770689 50770768 50770689 ID=Msa0553520-mRNA-1:exon:14338;Parent=Msa0553520-mRNA-1
chr4_1 exon 50770855 50771316 50770855 ID=Msa0553520-mRNA-1:exon:14339;Parent=Msa0553520-mRNA-1
chr4_1 exon 50771595 50771717 50771595 ID=Msa0553520-mRNA-1:exon:14340;Parent=Msa0553520-mRNA-1
chr4_1 exon 50772093 50772224 50772093 ID=Msa0553520-mRNA-1:exon:14341;Parent=Msa0553520-mRNA-1
chr4_1 exon 50772391 50772675 50772391 ID=Msa0553520-mRNA-1:exon:14342;Parent=Msa0553520-mRNA-1
chr4_1 exon 50773279 50773551 50773279 ID=Msa0553520-mRNA-1:exon:14343;Parent=Msa0553520-mRNA-1
chr4_1 exon 50773639 50773746 50773639 ID=Msa0553520-mRNA-1:exon:14344;Parent=Msa0553520-mRNA-1
chr4_1 exon 50774660 50775363 50774660 ID=Msa0553520-mRNA-1:exon:14345;Parent=Msa0553520-mRNA-1
chr4_1 five_prime_UTR 50766689 50766913 50766689 ID=Msa0553520-mRNA-1:five_prime_utr;Parent=Msa0553520-mRNA-1
chr4_1 CDS 50766914 50767169 50766914 ID=Msa0553520-mRNA-1:cds;Parent=Msa0553520-mRNA-1
chr4_1 CDS 50770689 50770768 50770689 ID=Msa0553520-mRNA-1:cds;Parent=Msa0553520-mRNA-1
chr4_1 CDS 50770855 50771316 50770855 ID=Msa0553520-mRNA-1:cds;Parent=Msa0553520-mRNA-1
chr4_1 CDS 50771595 50771717 50771595 ID=Msa0553520-mRNA-1:cds;Parent=Msa0553520-mRNA-1
chr4_1 CDS 50772093 50772224 50772093 ID=Msa0553520-mRNA-1:cds;Parent=Msa0553520-mRNA-1
chr4_1 CDS 50772391 50772675 50772391 ID=Msa0553520-mRNA-1:cds;Parent=Msa0553520-mRNA-1
chr4_1 CDS 50773279 50773551 50773279 ID=Msa0553520-mRNA-1:cds;Parent=Msa0553520-mRNA-1
chr4_1 CDS 50773639 50773746 50773639 ID=Msa0553520-mRNA-1:cds;Parent=Msa0553520-mRNA-1
chr4_1 CDS 50774660 50775022 50774660 ID=Msa0553520-mRNA-1:cds;Parent=Msa0553520-mRNA-1
chr4_1 three_prime_UTR 50775023 50775363 50775023 ID=Msa0553520-mRNA-1:three_prime_utr;Parent=Msa0553520-mRNA-1
Gene Sequence

>Msa0553520

ATGGAGATTGAAGCAGCAAGTGGTAGCAACAACAAAGGATGCAACATAGATGAGAGTGATGAAGAAGCATATTGTGGTCTTAATAGAGGAAGTTTCTTAGCATGGGAAGATCTAAGAGTTATGTTGCCAAATTTTGGGAAAGGACCAACTAAAAGGTTGCTTAATGGACTAAATGGTTTTGCTGAGCCTGGTAGAATCATGGCTATTATGGGTCCTTCTGGCTCTGGAAAATCCACTTTGCTTGATACACTTGCAGGTAGACTTGCAAAAAATGTTGTAATGACAGGAAATGTTCTTCTCAATGGGAAGAAAAAAACTCCAGGCTATGGTTTTGTTGCATACGTAACGCAAGAAGATGTGTTGTTAGGAACTCTTACAGTGAAAGAAACGATAACATATTCAGCACATTTACGTCTTCCATCAACAATGTCCAAAGAAGAAATCAGCGGCTTAGTTGATGCAACAATCATTGAAATGGGTCTCCATGACTGTGCAGATAGGTTAATAGGTAACTGGCATTTGAGAGGTATAAGTGGTGGCGAAAGGAAAAGAACTAGCATTGCACTTGAGATTCTCACAAGGCCTCGGTTACTGTTCCTTGATGAACCGACTAGTGGTTTGGACAGTGCATCTGCATTTTTTGTTGTTCAAACTCTTAGAAATTGTGCTCGTGATGGAAGGACTGTTATTTCTTCTATTCATCAGCCTAGCAGTGAAGTCTTCGCACTTTTTGATGATCTTTTCTTGCTCTCTGGTGGCGAAACTGTTTATTTTGGTGAAGCTAAAATGGCAATCGAGTTTTTTGCTGAAGCCGGTTTCCCTTGTCCACGTAAAAGAAATCCTTCTGATCATTTCCTAAGATGCATCAATTCTGACTTTGACGTTGTAACGGCTACACTGAAGGGATCTCAAAGGATTCCTGATGTTCCAAATTCAGCAGATCCTTTCATGAATTTGGCTACAGCACAAATTAAGTCGATGCTAGTTGAGAGATTTAAGCGTTCAACGTATGCCAGAAGGGTAAAAGACAAGATTCAAGAACAATCAACCAATGAAGGGCTTGAAACTGAGATAAACCTTGGAAGCCAAGCTAGTTGGTGGAAGCAACTCAAAACACTGACAAGGAGATCATTTGTGAACATGTGTAGAGATGTTGGTTACTACTGGCTGAGGATTATGATCTATATCATTGTATCTATATGTGTTGGAACTATCTATTTTGATATTGGCTACGGCTACACTTCCATCTTGGCTCGTGGTGCCTGTGGTGCATTTATATCAGGATTTATGACTTTCATGTCAATTGGAGGCTTTCCATCTTTTATTGAAGAAATGAAGGTATTTTATAGAGAAAGAATGAATGGATATTATGGCGTAGCAGCATTTATTTTATCAAACTTTCTTTCATCATTCCCGTTCTTGGTTGCTATTGCTCTTACTTCTTGCACAATCACATATAACATGGTGAAATTCAGGCCAGGATTCATTCACTATGCGTTTTTCACTGTTAACATATATGGATGCATCTCAGTGATTGAGAGTCTCATGATGGTTGTTGCTGCACTTGTTCCAAATTTTCTCATGGGAATCATTACAGGAGCTGGAATCATTGGAATCATGATGATGACCTCTGGATTCTTTAGGTTGCTATCTGATCTTCCAAAACCTGTTTGGCGCTATCCAATTTCATATATCAGTTACGGTGCATGGGCGATACAGGGTTCATACAAGAATGACTTGCTTGGTCTTGAGTTTGATCCACTACTCCCAGGTAACCCAAAACTGACAGGAGAATATGTGATAACACACATGTTGGGGATTGAATTAAGCCATTCCAAGTGGTGGGACTTGGCAGCACTTTTCCTCCTTCTCTTATGTTACAGGATATTGTTTTTTGTTGTTCTCAAGTTCAAGGAAAGAGCATCACCATTATATAGAAAACTTACTGCCAAAAGAACCATACAACAGCTTGAGAAAAGACCTTCTTTCAGGAAAATGCCATCTGTTACTACTTCCAGGAGGCATCAACCCCTTCATTCACTGTCTTCTCAAGAGGGTCTTGATTCTCCACTCCACACCTAG
Protein sequence

>Msa0553520

MEIEAASGSNNKGCNIDESDEEAYCGLNRGSFLAWEDLRVMLPNFGKGPTKRLLNGLNGFAEPGRIMAIMGPSGSGKSTLLDTLAGRLAKNVVMTGNVLLNGKKKTPGYGFVAYVTQEDVLLGTLTVKETITYSAHLRLPSTMSKEEISGLVDATIIEMGLHDCADRLIGNWHLRGISGGERKRTSIALEILTRPRLLFLDEPTSGLDSASAFFVVQTLRNCARDGRTVISSIHQPSSEVFALFDDLFLLSGGETVYFGEAKMAIEFFAEAGFPCPRKRNPSDHFLRCINSDFDVVTATLKGSQRIPDVPNSADPFMNLATAQIKSMLVERFKRSTYARRVKDKIQEQSTNEGLETEINLGSQASWWKQLKTLTRRSFVNMCRDVGYYWLRIMIYIIVSICVGTIYFDIGYGYTSILARGACGAFISGFMTFMSIGGFPSFIEEMKVFYRERMNGYYGVAAFILSNFLSSFPFLVAIALTSCTITYNMVKFRPGFIHYAFFTVNIYGCISVIESLMMVVAALVPNFLMGIITGAGIIGIMMMTSGFFRLLSDLPKPVWRYPISYISYGAWAIQGSYKNDLLGLEFDPLLPGNPKLTGEYVITHMLGIELSHSKWWDLAALFLLLLCYRILFFVVLKFKERASPLYRKLTAKRTIQQLEKRPSFRKMPSVTTSRRHQPLHSLSSQEGLDSPLHT*