AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0747900

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0747900 MtrunA17_Chr8g0386481 91.406 896 36 4 1 863 1 888 0.0 1612
Msa0747900 MtrunA17_Chr3g0122171 26.141 241 159 6 634 862 165 398 8.47e-15 77.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0747900 AT1G12800.1 43.952 835 346 19 42 863 42 767 0.0 587
Msa0747900 AT3G23700.1 25.490 255 145 8 633 862 157 391 3.19e-13 72.8

Find 193 sgRNAs with CRISPR-Local

Find 709 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGTTTAGCTCCCACATTTC+AGG 0.170273 5_2:-840425 Msa0747900:intron
GATTTCAATCCTTGGGGTTT+GGG 0.193475 5_2:+847237 None:intergenic
TGTTGATGTGTTAGATATTC+AGG 0.207545 5_2:-845976 Msa0747900:intron
TTCCAAAGTAAGTTATCTTT+TGG 0.224723 5_2:+844997 None:intergenic
TTGGTGATTGTACATTCTTT+TGG 0.226024 5_2:-839065 Msa0747900:three_prime_UTR
GTTAGTTCTTCCTTCTCTTT+TGG 0.246221 5_2:+845184 None:intergenic
GACCATTTACAGGTTTCTTT+TGG 0.271510 5_2:-845676 Msa0747900:intron
GGATTTCAATCCTTGGGGTT+TGG 0.279989 5_2:+847236 None:intergenic
TTTGAGGTTTGTTTCTCATA+TGG 0.280618 5_2:+846068 None:intergenic
AAGTTCTTATCATCATTTAT+TGG 0.288189 5_2:-845391 Msa0747900:CDS
AGATCTTCCAATTTCATATC+TGG 0.288740 5_2:+845442 None:intergenic
GTTATCACTATCATCAGATT+TGG 0.302013 5_2:+847215 None:intergenic
CTCAAATTCGGTCGTTTACT+TGG 0.305905 5_2:-847648 Msa0747900:CDS
TCAATCTTAAAATAATTAGA+TGG 0.307787 5_2:+844698 None:intergenic
AATTTCACCAGATATGAAAT+TGG 0.313854 5_2:-845449 Msa0747900:CDS
AGATTTGGATTTCAATCCTT+GGG 0.334723 5_2:+847230 None:intergenic
TGCTGATTCACCTTCACATA+TGG 0.336855 5_2:-845497 Msa0747900:CDS
TCTTTGTCACTTGCACTTTG+TGG 0.341871 5_2:+846529 None:intergenic
GGTGATGGTTCAAACGTCTT+TGG 0.342014 5_2:-839179 Msa0747900:CDS
TTATAATAATATACCGAAAT+GGG 0.343029 5_2:-847870 Msa0747900:exon
AGATTAGCACCTACATCAAT+TGG 0.345883 5_2:+846385 None:intergenic
TCACTGTTTCGACGACTTCC+AGG 0.345895 5_2:+846014 None:intergenic
AAAGTAGAAGAAGAGAAGTT+TGG 0.349842 5_2:-846427 Msa0747900:CDS
AAATTGCACATATAAAATTA+AGG 0.352057 5_2:-838774 Msa0747900:three_prime_UTR
GGTTTCCGCAGGGCTTCATT+AGG 0.353507 5_2:+847168 None:intergenic
CTTGTACTGATTCTCAAATA+TGG 0.356783 5_2:+839887 None:intergenic
ACCTTGGCAAGGGTGAGCTT+AGG 0.357739 5_2:+847618 None:intergenic
AGTCTCAAATTTGACCTTGT+TGG 0.365483 5_2:-846557 Msa0747900:CDS
GGTTGTCAAAGAGTGCTCTA+AGG 0.367353 5_2:+838609 None:intergenic
GCCCAAGAGCAGAGTTTATC+TGG 0.369434 5_2:+843499 None:intergenic
TCTTTGCTACTTGCTCTTTG+TGG 0.371891 5_2:+846610 None:intergenic
CAGATTTGGATTTCAATCCT+TGG 0.375039 5_2:+847229 None:intergenic
CAATACAAGGAAAGCCAAAA+AGG 0.377381 5_2:-846180 Msa0747900:intron
GTTATAATAATATACCGAAA+TGG 0.379252 5_2:-847871 Msa0747900:exon
TCAGGCAATGACTTGTTTAG+AGG 0.380208 5_2:+839091 None:intergenic
GTCTCCAACTACAGACTCTA+AGG 0.385731 5_2:+843337 None:intergenic
CAAGGTCTTTCAACTTCAAA+TGG 0.390599 5_2:+847276 None:intergenic
AGGAAGCCTGGATCGGTAAT+TGG 0.394951 5_2:-846964 Msa0747900:CDS
CACCAGATAAACTCTGCTCT+TGG 0.395984 5_2:-843501 Msa0747900:CDS
TCCACTTTGACAGAAGATTT+CGG 0.401680 5_2:+845629 None:intergenic
TGTATGTAGTATAATCTCTT+TGG 0.404915 5_2:-838798 Msa0747900:three_prime_UTR
CTCTTGTATAATTAACTTGA+AGG 0.405407 5_2:+839016 None:intergenic
ATCTCCCATCAAAGGGTTCA+TGG 0.406851 5_2:+843315 None:intergenic
GGAGACCATGAACCCTTTGA+TGG 0.413785 5_2:-843320 Msa0747900:CDS
ACTTTGTCGCCTGCTCTTTG+TGG 0.414821 5_2:+846445 None:intergenic
AGCAAAGAAGAAGAGCAGTT+TGG 0.415432 5_2:-846595 Msa0747900:CDS
TAATTACAAGTTTCAAACTT+TGG 0.416121 5_2:+838665 None:intergenic
CTTATCATCATTTATTGGAC+AGG 0.419098 5_2:-845386 Msa0747900:intron
TGAACCCTTTGATGGGAGAT+TGG 0.423539 5_2:-843312 Msa0747900:CDS
GGCTTTCTCAAAATAACATT+AGG 0.429930 5_2:+847120 None:intergenic
TTCTTACCAATTACCGATCC+AGG 0.430760 5_2:+846958 None:intergenic
AGTCGCAAAATTAACCTTGT+TGG 0.432749 5_2:-846638 Msa0747900:CDS
TAACATTTCCGGGTTTCCGC+AGG 0.436095 5_2:+847157 None:intergenic
GCAGAAGATTTGATTAAGAC+TGG 0.436189 5_2:-845819 Msa0747900:CDS
ATATCAAGATAAGATGCATC+AGG 0.438714 5_2:+847354 None:intergenic
CCTTGGCAAGGGTGAGCTTA+GGG 0.444332 5_2:+847619 None:intergenic
CATTTGAAGTTGAAAGACCT+TGG 0.447563 5_2:-847275 Msa0747900:CDS
ATCCAAAAGATAACTTACTT+TGG 0.452303 5_2:-844999 Msa0747900:CDS
TCCTTGTATTGCAGCTTCTA+CGG 0.457600 5_2:+846192 None:intergenic
TCTAGTTCTTTATTAGAACT+TGG 0.460495 5_2:+846685 None:intergenic
GACCTCATGGAACTCAAATT+CGG 0.460663 5_2:-847660 Msa0747900:CDS
CTTAATCAAATCTTCTGCCT+TGG 0.461307 5_2:+845824 None:intergenic
ACCAGATAAACTCTGCTCTT+GGG 0.462112 5_2:-843500 Msa0747900:CDS
CGTCGAAACAGTGATGAATC+AGG 0.465924 5_2:-846005 Msa0747900:CDS
AGTTAGTAACTTGACCTTGT+TGG 0.472182 5_2:-846890 Msa0747900:CDS
ATACAAGAGGTTTGTGGCGT+GGG 0.475305 5_2:-839002 Msa0747900:three_prime_UTR
ATTTGAAGTTGAAAGACCTT+GGG 0.477834 5_2:-847274 Msa0747900:CDS
GAGAGGAAGAGACCCCATTT+CGG 0.483308 5_2:+847857 None:intergenic
AGTCGAGAAGTTGACCTTGT+TGG 0.484401 5_2:-846722 Msa0747900:CDS
GAAACAATCAGAGGTCCATC+AGG 0.484594 5_2:-846275 Msa0747900:CDS
GGGAAAAGTTGTGGAAATTG+AGG 0.484696 5_2:-847304 Msa0747900:CDS
TTATTTGATGATGAAAAGAA+AGG 0.487105 5_2:+847795 None:intergenic
TAGTGATAACAATGTTGAAA+TGG 0.489700 5_2:-847202 Msa0747900:CDS
GTTCTTTATTGCAACTTGGC+CGG 0.493823 5_2:+846773 None:intergenic
GACTCTAAGGAGTTCATCAA+TGG 0.495098 5_2:+843350 None:intergenic
TTAATTATACAAGAGGTTTG+TGG 0.496879 5_2:-839008 Msa0747900:three_prime_UTR
ATGACATTGTTGAGGAAGCC+TGG 0.497227 5_2:-846976 Msa0747900:CDS
AGGAAGGCGAAGATGCTGAT+TGG 0.497752 5_2:-845848 Msa0747900:CDS
TTCGACGACTTCCAGGATCA+AGG 0.498563 5_2:+846021 None:intergenic
TCTACTTCTTTATTGCAACC+TGG 0.499754 5_2:+846853 None:intergenic
TGAAATGTGGGAGCTAAACC+AGG 0.501204 5_2:+840427 None:intergenic
GCTGGCATTGTGCAGAGGCT+TGG 0.501467 5_2:-838752 Msa0747900:three_prime_UTR
AGTACTTACAACAAAACCCT+TGG 0.502520 5_2:+845761 None:intergenic
TGCTTCCAATCTCCCATCAA+AGG 0.503013 5_2:+843307 None:intergenic
CGGGTGGAATCCGTGCTCCT+AGG 0.503154 5_2:-838947 Msa0747900:three_prime_UTR
TTGATTGATGATAGCAATTG+TGG 0.503520 5_2:-847896 Msa0747900:five_prime_UTR
TGCACATATAAAATTAAGGC+TGG 0.505999 5_2:-838770 Msa0747900:three_prime_UTR
GGCATCCAGTCAGTTTCAAA+AGG 0.506934 5_2:-840466 Msa0747900:CDS
CTTCAAGTTAATTATACAAG+AGG 0.507964 5_2:-839015 Msa0747900:three_prime_UTR
TGAGTCATGGTTAAGACAGA+AGG 0.510692 5_2:-845593 Msa0747900:CDS
GAGACCGCTTCCCTTGATCC+TGG 0.511659 5_2:-846032 Msa0747900:CDS
AACTCCTTAGAGTCTGTAGT+TGG 0.511792 5_2:-843341 Msa0747900:CDS
ATGGTTAAGACAGAAGGGCT+TGG 0.512552 5_2:-845587 Msa0747900:CDS
AATGACTTGTTTAGAGGCAC+AGG 0.512911 5_2:+839097 None:intergenic
ATCAATGTACAAGCAAAACT+TGG 0.513561 5_2:-845560 Msa0747900:CDS
AATTTACTAACTTCATCACT+TGG 0.516167 5_2:+846817 None:intergenic
CCGTCTGATTTAAATTCAGT+TGG 0.522605 5_2:-846232 Msa0747900:CDS
TTCAATCCTTGGGGTTTGGG+AGG 0.523152 5_2:+847240 None:intergenic
GTTGTCAAAGAGTGCTCTAA+GGG 0.528350 5_2:+838610 None:intergenic
ACCGAAATCTTCTGTCAAAG+TGG 0.532098 5_2:-845630 Msa0747900:CDS
TTGTCCTCATTATACAAAGA+CGG 0.536396 5_2:+847099 None:intergenic
AATGAAGCCCTGCGGAAACC+CGG 0.536701 5_2:-847165 Msa0747900:CDS
GGTCGTAATTATCAAGTTGA+GGG 0.538612 5_2:+847679 None:intergenic
GACGACTAGAAAAGTGAAGT+TGG 0.538711 5_2:-847926 Msa0747900:five_prime_UTR
GTCTTCATCGCGTGAAGATG+AGG 0.541886 5_2:+847710 None:intergenic
ACTTGATAATTACGACCTCA+TGG 0.542252 5_2:-847673 Msa0747900:CDS
TTAAATCAAATAGTTCCTGA+TGG 0.542304 5_2:+846260 None:intergenic
GATTAGCACCTACATCAATT+GGG 0.542482 5_2:+846386 None:intergenic
TCAAGTTCTTTATTGCAACT+TGG 0.544444 5_2:+846769 None:intergenic
GTTTATTATCACCTTGGCAA+GGG 0.544529 5_2:+847608 None:intergenic
TGAGGACAAAGACGAGGATG+AGG 0.544633 5_2:-847085 Msa0747900:CDS
TACTTTCACAACACAACGCA+GGG 0.547685 5_2:+847958 None:intergenic
CGTAGTAAGCTGCAATGCCA+AGG 0.547738 5_2:-845778 Msa0747900:CDS
GCTTCCAATCTCCCATCAAA+GGG 0.548225 5_2:+843308 None:intergenic
AACATTTCCGGGTTTCCGCA+GGG 0.548649 5_2:+847158 None:intergenic
CAATCTTAAAATAATTAGAT+GGG 0.548668 5_2:+844699 None:intergenic
TTGCAACAGCCACAAAGAGC+AGG 0.549085 5_2:-846454 Msa0747900:CDS
TGTTTATTATCACCTTGGCA+AGG 0.550091 5_2:+847607 None:intergenic
AAATTTGAGACTTCATCACT+TGG 0.552757 5_2:+846568 None:intergenic
TTCATCAATCAGAAATATCG+TGG 0.553101 5_2:-844736 Msa0747900:CDS
CCTTCACATATGGAGAATGA+TGG 0.553944 5_2:-845487 Msa0747900:CDS
AAGATAAGATGCATCAGGGT+TGG 0.554730 5_2:+847359 None:intergenic
GACTGGAGATAGAGTTGATG+TGG 0.556420 5_2:-845802 Msa0747900:CDS
TCTTGTATAATTAACTTGAA+GGG 0.558388 5_2:+839017 None:intergenic
AGGTCGTAATTATCAAGTTG+AGG 0.559175 5_2:+847678 None:intergenic
GAAATTGAGCTGTGGTAGTG+AGG 0.561234 5_2:+847817 None:intergenic
TCCGTAGAAGCTGCAATACA+AGG 0.561934 5_2:-846193 Msa0747900:CDS
AAACAAACCTCAAAAGCAGT+TGG 0.562077 5_2:-846059 Msa0747900:CDS
AATGCAGAGTGGACAAGTGA+AGG 0.565174 5_2:-847013 Msa0747900:CDS
CAAAGACGAGGATGAGGACG+TGG 0.565545 5_2:-847079 Msa0747900:CDS
CCGGTGTGGCTGTTCTAACA+AGG 0.566614 5_2:+846792 None:intergenic
CTGTTTGGTACAGGTTGTAG+AGG 0.567539 5_2:-843532 Msa0747900:intron
TCTTTGTGGCTGTTCCAACA+AGG 0.567751 5_2:+846624 None:intergenic
GAGTCATGGTTAAGACAGAA+GGG 0.568767 5_2:-845592 Msa0747900:CDS
GAGACCATGAACCCTTTGAT+GGG 0.569999 5_2:-843319 Msa0747900:CDS
GGAGTGCTGGCTGCAATCAA+AGG 0.571105 5_2:-839042 Msa0747900:three_prime_UTR
CCAACTGAATTTAAATCAGA+CGG 0.572470 5_2:+846232 None:intergenic
TGAAAAGAAGAGAAATCTCA+TGG 0.574447 5_2:-845161 Msa0747900:intron
TATACAAGAGGTTTGTGGCG+TGG 0.574714 5_2:-839003 Msa0747900:three_prime_UTR
TCGACGACTTCCAGGATCAA+GGG 0.574801 5_2:+846022 None:intergenic
CCATCATTCTCCATATGTGA+AGG 0.575054 5_2:+845487 None:intergenic
CCCTAAGCTCACCCTTGCCA+AGG 0.575869 5_2:-847619 Msa0747900:intron
AAGTTTGCGACTTCATCACT+TGG 0.578380 5_2:+846484 None:intergenic
CATACGTGTTACTATCAGAC+AGG 0.579563 5_2:-845237 Msa0747900:CDS
TTATTAGAACTTGGTCTGTG+TGG 0.580255 5_2:+846694 None:intergenic
TTCACTAAGACCAAAAGAGA+AGG 0.583737 5_2:-845194 Msa0747900:CDS
CAAATAGAGTAGAATAGTTG+TGG 0.583786 5_2:-839120 Msa0747900:exon
AACTTCTCGACTTCATCACT+CGG 0.585095 5_2:+846733 None:intergenic
TTGGAACAACCACACAGACC+AGG 0.585459 5_2:-846871 Msa0747900:CDS
TTTATCATTAAAGGAGGTCA+CGG 0.589002 5_2:-843469 Msa0747900:intron
ATCAGAAAACAAAATACAAG+AGG 0.589419 5_2:-839853 Msa0747900:intron
CTGTTGTTAATGCAGGTTGA+AGG 0.600793 5_2:-844773 Msa0747900:intron
AGCAGCTCAAACAGATGTAG+AGG 0.601853 5_2:-843288 Msa0747900:intron
CTACTTTCACAACACAACGC+AGG 0.603170 5_2:+847957 None:intergenic
CTAGGAGCACGGATTCCACC+CGG 0.603610 5_2:+838948 None:intergenic
AAGTTACTAACTTCATAACT+CGG 0.605666 5_2:+846901 None:intergenic
TTATTGCAACTTGGCCGGTG+TGG 0.606693 5_2:+846778 None:intergenic
ACTTCCAGGATCAAGGGAAG+CGG 0.612886 5_2:+846028 None:intergenic
TTAAGGCTGGCATTGTGCAG+AGG 0.616121 5_2:-838757 Msa0747900:three_prime_UTR
GATTTGGATTTCAATCCTTG+GGG 0.619602 5_2:+847231 None:intergenic
TTTGACAGAAGATTTCGGTA+TGG 0.621714 5_2:+845634 None:intergenic
AAAGCCGTCTTTGTATAATG+AGG 0.622243 5_2:-847103 Msa0747900:CDS
ATTGTTGAGGAAGCCTGGAT+CGG 0.623282 5_2:-846971 Msa0747900:CDS
TTATTGCAACCTGGTCTGTG+TGG 0.626358 5_2:+846862 None:intergenic
TGGCAGGCTAGACTTCAAGT+TGG 0.627339 5_2:-845041 Msa0747900:intron
AGGACGTGGACATGTCTTCG+AGG 0.631742 5_2:-847065 Msa0747900:CDS
TCTGTGTGGTTGTTCCAACA+AGG 0.634295 5_2:+846876 None:intergenic
TCATCAATCAGAAATATCGT+GGG 0.638027 5_2:-844735 Msa0747900:CDS
CCTTGTTAGAACAGCCACAC+CGG 0.640177 5_2:-846792 Msa0747900:CDS
TATAATAATATACCGAAATG+GGG 0.647297 5_2:-847869 Msa0747900:exon
AAATTACCTCCCAAACCCCA+AGG 0.648859 5_2:-847246 Msa0747900:CDS
TATCAAGATAAGATGCATCA+GGG 0.650570 5_2:+847355 None:intergenic
AGCTGTGGTAGTGAGGAATG+AGG 0.650673 5_2:+847824 None:intergenic
GTAGTAAGCTGCAATGCCAA+GGG 0.651430 5_2:-845777 Msa0747900:CDS
AGTGCTCTAAGGGCACTCGT+TGG 0.652288 5_2:+838620 None:intergenic
TGTGTCCATACCTGAAATGT+GGG 0.654296 5_2:+840415 None:intergenic
ATGTGTCCATACCTGAAATG+TGG 0.655457 5_2:+840414 None:intergenic
TTGTCTCTTAAAATGCAGAG+TGG 0.657453 5_2:-847024 Msa0747900:CDS
GTCGTAATTATCAAGTTGAG+GGG 0.657489 5_2:+847680 None:intergenic
TCTGTGTGGCTGTTCCAACA+AGG 0.658864 5_2:+846708 None:intergenic
ACAGAAGCAGAAACAATCAG+AGG 0.662006 5_2:-846284 Msa0747900:CDS
CGAAGATGCTGATTGGACCA+AGG 0.664461 5_2:-845841 Msa0747900:CDS
GTTTGGAGATGTGAGAGTCG+TGG 0.672097 5_2:-846410 Msa0747900:CDS
AAAGAAAGGAAATTGAGCTG+TGG 0.679459 5_2:+847809 None:intergenic
GACCGAATTTGAGTTCCATG+AGG 0.681564 5_2:+847658 None:intergenic
TTAGTGACATGACATTGTTG+AGG 0.681631 5_2:-846984 Msa0747900:CDS
AATATCGTGGGATTCCACGT+TGG 0.686793 5_2:-844723 Msa0747900:CDS
TTGAAAGTGAATTGAAGACG+CGG 0.705451 5_2:-846933 Msa0747900:CDS
GAAATGTGGGAGCTAAACCA+GGG 0.713750 5_2:+840428 None:intergenic
ATAATTAGATGGGTCCAACG+TGG 0.724986 5_2:+844709 None:intergenic
GTATGGCAGAAATCCTACCA+AGG 0.737333 5_2:+845651 None:intergenic
GTATAATGAGGACAAAGACG+AGG 0.738789 5_2:-847091 Msa0747900:CDS
AGAAACCTAATGAAGCCCTG+CGG 0.790697 5_2:-847173 Msa0747900:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+GGG + chr5_2:843418-843437 None:intergenic 0.0%
!! ATATATATATATATATATAT+AGG + chr5_2:843417-843436 None:intergenic 0.0%
!!! ATCATTTTATAAAAGAAAAA+AGG - chr5_2:839256-839275 Msa0747900:intron 10.0%
!!! TCATTTTATAAAAGAAAAAA+GGG - chr5_2:839257-839276 Msa0747900:intron 10.0%
!! CAAAAATAGATAAATTTATT+TGG + chr5_2:841249-841268 None:intergenic 10.0%
!! AGTTATTTAATAAATTCAAT+AGG + chr5_2:843378-843397 None:intergenic 10.0%
!!! CATTTTTATAAGTATTATTA+AGG - chr5_2:843601-843620 Msa0747900:intron 10.0%
!!! CTAATTAATTTTAAATAGAA+GGG + chr5_2:843785-843804 None:intergenic 10.0%
!!! TCTAATTAATTTTAAATAGA+AGG + chr5_2:843786-843805 None:intergenic 10.0%
!! TTAATTAGAATATAAACAAA+AGG - chr5_2:843797-843816 Msa0747900:intron 10.0%
!! TAATTAGAATATAAACAAAA+GGG - chr5_2:843798-843817 Msa0747900:intron 10.0%
!! TATATATATATATATATAGG+GGG + chr5_2:843868-843887 None:intergenic 10.0%
!!! ATAATTTTTTTTATTTTGCA+GGG + chr5_2:843960-843979 None:intergenic 10.0%
!!! AATAATTTTTTTTATTTTGC+AGG + chr5_2:843961-843980 None:intergenic 10.0%
!! AGATCTATTATTAATAATAA+TGG - chr5_2:844170-844189 Msa0747900:intron 10.0%
!! GATCTATTATTAATAATAAT+GGG - chr5_2:844171-844190 Msa0747900:intron 10.0%
!! AATATATGAATGTAATTTAA+GGG + chr5_2:844673-844692 None:intergenic 10.0%
!! AAATATATGAATGTAATTTA+AGG + chr5_2:844674-844693 None:intergenic 10.0%
!! ATAATATAATGAATCATATT+TGG - chr5_2:846202-846221 Msa0747900:CDS 10.0%
!! TTATAATAATATACCGAAAT+GGG - chr5_2:838711-838730 Msa0747900:three_prime_UTR 15.0%
!!! TTCAATATAATTGTTGTTTT+AGG - chr5_2:839184-839203 Msa0747900:intron 15.0%
!!! ATTATTATCATATACCTTTT+TGG + chr5_2:840418-840437 None:intergenic 15.0%
!! TCTATAACAAAATTACATTT+AGG + chr5_2:840487-840506 None:intergenic 15.0%
!! TACAATATCAAAAAACAAAA+AGG + chr5_2:840714-840733 None:intergenic 15.0%
!!! TTTTTGTTTTTTGATATTGT+AGG - chr5_2:840713-840732 Msa0747900:intron 15.0%
!! CAATCTTAAAATAATTAGAT+GGG + chr5_2:841885-841904 None:intergenic 15.0%
!! TCAATCTTAAAATAATTAGA+TGG + chr5_2:841886-841905 None:intergenic 15.0%
!!! TAATTATTTTAAGATTGATC+AGG - chr5_2:841888-841907 Msa0747900:intron 15.0%
!! TTAAAAAACACATAAGATAA+TGG - chr5_2:842127-842146 Msa0747900:intron 15.0%
!! AAAAAAAAGAACAAACAAAT+TGG - chr5_2:842772-842791 Msa0747900:intron 15.0%
!!! AGTTATCTATATAGTTATTT+TGG - chr5_2:843136-843155 Msa0747900:intron 15.0%
!!! CTTTTTTGTTTCTTTTTTTA+AGG - chr5_2:843732-843751 Msa0747900:intron 15.0%
!!! TGTTTTTGTAAATTATAAGT+GGG - chr5_2:843821-843840 Msa0747900:intron 15.0%
!!! TAATTTTTTTTATTTTGCAG+GGG + chr5_2:843959-843978 None:intergenic 15.0%
!! ATATGTATTATTGAGTTAAA+AGG - chr5_2:844007-844026 Msa0747900:intron 15.0%
!! CAATTAATTAAATCTTCAAA+GGG + chr5_2:846428-846447 None:intergenic 15.0%
!! ACAATTAATTAAATCTTCAA+AGG + chr5_2:846429-846448 None:intergenic 15.0%
!!! TTGTAATTCTAAAAAAAACT+TGG - chr5_2:846499-846518 Msa0747900:CDS 15.0%
!! TCATTAATATAAAGAGAAAA+AGG + chr5_2:846838-846857 None:intergenic 15.0%
!! AAATTGCACATATAAAATTA+AGG - chr5_2:847807-847826 Msa0747900:CDS 15.0%
!! GTTATAATAATATACCGAAA+TGG - chr5_2:838710-838729 Msa0747900:three_prime_UTR 20.0%
!! TATAATAATATACCGAAATG+GGG - chr5_2:838712-838731 Msa0747900:three_prime_UTR 20.0%
!!! TTATTTGATGATGAAAAGAA+AGG + chr5_2:838789-838808 None:intergenic 20.0%
!! TAATATGTTTATTATCACCT+TGG + chr5_2:838982-839001 None:intergenic 20.0%
!! ATAAATGAAACTTGCAAATT+TGG + chr5_2:839146-839165 None:intergenic 20.0%
!! TGCAAGTTTCATTTATTTAT+TGG - chr5_2:839150-839169 Msa0747900:CDS 20.0%
!!! ATAATTGTTGTTTTAGGTAT+TGG - chr5_2:839190-839209 Msa0747900:intron 20.0%
!!! TAATTGTTGTTTTAGGTATT+GGG - chr5_2:839191-839210 Msa0747900:intron 20.0%
!!! ATTACTTTTTCTAACATTTC+CGG + chr5_2:839438-839457 None:intergenic 20.0%
!! TATTTCATGCTTGATTAATT+AGG - chr5_2:840264-840283 Msa0747900:intron 20.0%
!! ATTTCATGCTTGATTAATTA+GGG - chr5_2:840265-840284 Msa0747900:intron 20.0%
!! TATAGATAAGTAAGTAACTA+GGG + chr5_2:840648-840667 None:intergenic 20.0%
!! ATATAGATAAGTAAGTAACT+AGG + chr5_2:840649-840668 None:intergenic 20.0%
!! AACAAAAAGGTAAATAAACA+TGG + chr5_2:840701-840720 None:intergenic 20.0%
!! AGTACTTAAAAAACAGTAAA+AGG - chr5_2:840837-840856 Msa0747900:intron 20.0%
!! GTACTTAAAAAACAGTAAAA+GGG - chr5_2:840838-840857 Msa0747900:intron 20.0%
!! AAGTTCTTATCATCATTTAT+TGG - chr5_2:841190-841209 Msa0747900:intron 20.0%
!! TACATGTATTTGATCTAAAT+TGG + chr5_2:842369-842388 None:intergenic 20.0%
!! TTGAATCTTAAATTATGATG+AGG + chr5_2:842438-842457 None:intergenic 20.0%
!! GAAGTGCAAAAAAATATATT+TGG - chr5_2:842906-842925 Msa0747900:intron 20.0%
!! AGTAATAGATTGCAAAATAA+TGG + chr5_2:842939-842958 None:intergenic 20.0%
!!! ATTATTTTGCAATCTATTAC+TGG - chr5_2:842938-842957 Msa0747900:intron 20.0%
!!! CATATTTTTATCATTAAAGG+AGG - chr5_2:843106-843125 Msa0747900:intron 20.0%
!!! ACTTTTAAGGAAACAATATT+TGG + chr5_2:843671-843690 None:intergenic 20.0%
!!! GTAATAAAGACAAACTTTTA+AGG + chr5_2:843684-843703 None:intergenic 20.0%
!!! GTGTTTTTGTAAATTATAAG+TGG - chr5_2:843820-843839 Msa0747900:intron 20.0%
!!! ATATATACACGTGTTTTATT+TGG - chr5_2:843919-843938 Msa0747900:intron 20.0%
!! AAGTTCAAAATACAACTAAT+AGG - chr5_2:844298-844317 Msa0747900:intron 20.0%
!!! AAGTTTGGTGATAATAAATT+GGG - chr5_2:844353-844372 Msa0747900:intron 20.0%
!!! AAATGTAATTTTGATACAAG+CGG + chr5_2:844617-844636 None:intergenic 20.0%
!!! CTCTCTCTTTTTTTTTTTTT+TGG - chr5_2:844732-844751 Msa0747900:CDS 20.0%
!! AAACAAAAAAACTTGAATAG+CGG + chr5_2:845817-845836 None:intergenic 20.0%
!! AAAAGAATTGCAAAAAATTG+AGG - chr5_2:846093-846112 Msa0747900:intron 20.0%
!! AAAGAATTGCAAAAAATTGA+GGG - chr5_2:846094-846113 Msa0747900:intron 20.0%
!! TTAACATTTCATAAACCATA+CGG + chr5_2:846312-846331 None:intergenic 20.0%
!! AAAGAATAATTTGACAGAAA+TGG + chr5_2:846396-846415 None:intergenic 20.0%
!! AGATGAATTTCTTCAATAAA+TGG - chr5_2:846986-847005 Msa0747900:CDS 20.0%
!! GATGAATTTCTTCAATAAAT+GGG - chr5_2:846987-847006 Msa0747900:CDS 20.0%
!!! ACTTATTTGTATATGCTTTT+TGG - chr5_2:847245-847264 Msa0747900:CDS 20.0%
!!! TCTTGTATAATTAACTTGAA+GGG + chr5_2:847567-847586 None:intergenic 20.0%
!! AAGATTAAAAATTTCTCAAG+TGG + chr5_2:847704-847723 None:intergenic 20.0%
!!! TGAGAAATTTTTAATCTTCA+TGG - chr5_2:847706-847725 Msa0747900:CDS 20.0%
!! TAATTACAAGTTTCAAACTT+TGG + chr5_2:847919-847938 None:intergenic 20.0%
! TAGTGATAACAATGTTGAAA+TGG - chr5_2:839379-839398 Msa0747900:intron 25.0%
!!! TTACTTTTTCTAACATTTCC+GGG + chr5_2:839437-839456 None:intergenic 25.0%
!!! TGCATTTTAAGAGACAAATT+TGG + chr5_2:839554-839573 None:intergenic 25.0%
! AAGTTACTAACTTCATAACT+CGG + chr5_2:839683-839702 None:intergenic 25.0%
! AATTTACTAACTTCATCACT+TGG + chr5_2:839767-839786 None:intergenic 25.0%
!!! TCTAGTTCTTTATTAGAACT+TGG + chr5_2:839899-839918 None:intergenic 25.0%
! GCAATTATGGAATTTGATAA+CGG - chr5_2:840224-840243 Msa0747900:intron 25.0%
! TTAAATCAAATAGTTCCTGA+TGG + chr5_2:840324-840343 None:intergenic 25.0%
! CAGTTGTATATTTCAGATTA+TGG - chr5_2:840442-840461 Msa0747900:CDS 25.0%
! GGTAAATAAACATGGAATTT+AGG + chr5_2:840693-840712 None:intergenic 25.0%
!!! TGTTTTTTGATATTGTAGGA+AGG - chr5_2:840717-840736 Msa0747900:intron 25.0%
!!! AATTTTTAGCTTTTGAGTCA+TGG - chr5_2:840975-840994 Msa0747900:intron 25.0%
! AATTTCACCAGATATGAAAT+TGG - chr5_2:841132-841151 Msa0747900:intron 25.0%
!! ATAAGAACTTGATTTTCTCT+TGG + chr5_2:841180-841199 None:intergenic 25.0%
!!! TTATCTATTTTTGCTGCAAA+AGG - chr5_2:841256-841275 Msa0747900:intron 25.0%
! ATCCAAAAGATAACTTACTT+TGG - chr5_2:841582-841601 Msa0747900:intron 25.0%
!! TTCCAAAGTAAGTTATCTTT+TGG + chr5_2:841587-841606 None:intergenic 25.0%
!!! TTACTTTGGAATTTTTGTTG+AGG - chr5_2:841596-841615 Msa0747900:intron 25.0%
! TACTTATATTTACGACCAAA+CGG + chr5_2:842326-842345 None:intergenic 25.0%
! AGTATAAAGCTACATGTATT+TGG - chr5_2:842342-842361 Msa0747900:intron 25.0%
!!! GTACGTTTTTGCTTTTATTT+TGG - chr5_2:842386-842405 Msa0747900:intron 25.0%
! ATCAAATGACAAAAGAAAAG+TGG - chr5_2:842465-842484 Msa0747900:intron 25.0%
!!! TTTCTAGTGTGTATCTATTT+TGG + chr5_2:842607-842626 None:intergenic 25.0%
! TGTTCAAGAGAATTATAACT+GGG + chr5_2:842730-842749 None:intergenic 25.0%
!!! AATTGGACTTTTTTTTTTGC+CGG - chr5_2:842789-842808 Msa0747900:intron 25.0%
! ACAATGCATAATATATGGAA+AGG + chr5_2:842837-842856 None:intergenic 25.0%
! ATAAAAACATCAGATTCCAT+GGG + chr5_2:843000-843019 None:intergenic 25.0%
! TATAAAAACATCAGATTCCA+TGG + chr5_2:843001-843020 None:intergenic 25.0%
!!! GCGCATATTTTTATCATTAA+AGG - chr5_2:843103-843122 Msa0747900:intron 25.0%
!! ACTTGCACCTTAATAATTTT+AGG + chr5_2:843549-843568 None:intergenic 25.0%
! ATGAGTGTAAATAATCAAGT+GGG + chr5_2:843584-843603 None:intergenic 25.0%
! AATGAGTGTAAATAATCAAG+TGG + chr5_2:843585-843604 None:intergenic 25.0%
!! ATATTTGGAATGATGAAAGT+GGG + chr5_2:843656-843675 None:intergenic 25.0%
!! AATATTTGGAATGATGAAAG+TGG + chr5_2:843657-843676 None:intergenic 25.0%
! CATATTTCTCTATCTATCTT+GGG + chr5_2:843992-844011 None:intergenic 25.0%
! ACATATTTCTCTATCTATCT+TGG + chr5_2:843993-844012 None:intergenic 25.0%
! TAGAAAAGGGAATAATAGAA+TGG + chr5_2:844116-844135 None:intergenic 25.0%
! TTCAAAATACAACTAATAGG+TGG - chr5_2:844301-844320 Msa0747900:intron 25.0%
! TTATTATCACCAAACTTCAT+GGG + chr5_2:844350-844369 None:intergenic 25.0%
! TTTATTATCACCAAACTTCA+TGG + chr5_2:844351-844370 None:intergenic 25.0%
!! GAAGTTTGGTGATAATAAAT+TGG - chr5_2:844352-844371 Msa0747900:intron 25.0%
! ATTATGTGAAGTGTGAAAAT+GGG - chr5_2:844380-844399 Msa0747900:intron 25.0%
!!! AATGTAATTTTGATACAAGC+GGG + chr5_2:844616-844635 None:intergenic 25.0%
! CAAGGTTACTAATTTAATAG+AGG + chr5_2:844643-844662 None:intergenic 25.0%
!! TAATTTAAGGGTTTGTTTCA+AGG + chr5_2:844661-844680 None:intergenic 25.0%
! GTTTACAAAAATCAGATTGT+TGG - chr5_2:844754-844773 Msa0747900:CDS 25.0%
!! CACATTTTGTAAAAAACTGA+GGG - chr5_2:844996-845015 Msa0747900:CDS 25.0%
! AAACTTGATTTATCAAATGC+TGG + chr5_2:845692-845711 None:intergenic 25.0%
! CTTATCTTTGATTCATTGTA+GGG + chr5_2:845974-845993 None:intergenic 25.0%
! ACTTATCTTTGATTCATTGT+AGG + chr5_2:845975-845994 None:intergenic 25.0%
! TGATTCATTATATTATGCAG+AGG + chr5_2:846198-846217 None:intergenic 25.0%
!!! TTTTATTTTGTTGATTGAGC+TGG - chr5_2:846266-846285 Msa0747900:CDS 25.0%
! TAACATTTCATAAACCATAC+GGG + chr5_2:846311-846330 None:intergenic 25.0%
! ATCAACTGTCAGATATAATA+TGG - chr5_2:846337-846356 Msa0747900:intron 25.0%
! TTAAATCTTCAAAGGGAAAA+TGG + chr5_2:846421-846440 None:intergenic 25.0%
! CATGTTCATAAATAACGTAT+GGG - chr5_2:846564-846583 Msa0747900:CDS 25.0%
! TATAAACCTGGAACAAAATT+TGG + chr5_2:846668-846687 None:intergenic 25.0%
!! AATTTTGTTCCAGGTTTATA+TGG - chr5_2:846668-846687 Msa0747900:CDS 25.0%
!!! TTGTATTTTGTTTTCTGATC+GGG + chr5_2:846727-846746 None:intergenic 25.0%
!!! CTTGTATTTTGTTTTCTGAT+CGG + chr5_2:846728-846747 None:intergenic 25.0%
! ATCAGAAAACAAAATACAAG+AGG - chr5_2:846728-846747 Msa0747900:CDS 25.0%
! AAAAAGGAATACAAATGAGA+GGG + chr5_2:846822-846841 None:intergenic 25.0%
!! TAGCAACACAATCTTTTTAT+TGG - chr5_2:846923-846942 Msa0747900:CDS 25.0%
!!! AAAAAGTTTTTCTGTTGACT+CGG + chr5_2:847100-847119 None:intergenic 25.0%
!!! TATTTGTATATGCTTTTTGG+CGG - chr5_2:847248-847267 Msa0747900:CDS 25.0%
! CTATGCATGAATATGAAAAT+AGG + chr5_2:847347-847366 None:intergenic 25.0%
!! CTCTTGTATAATTAACTTGA+AGG + chr5_2:847568-847587 None:intergenic 25.0%
!! CTTCAAGTTAATTATACAAG+AGG - chr5_2:847566-847585 Msa0747900:intron 25.0%
! TTAATTATACAAGAGGTTTG+TGG - chr5_2:847573-847592 Msa0747900:intron 25.0%
! TTCTTTCCCAGAAAAAAAAA+AGG - chr5_2:847610-847629 Msa0747900:intron 25.0%
! TGTATGTAGTATAATCTCTT+TGG - chr5_2:847783-847802 Msa0747900:CDS 25.0%
!! CTTTGGTAATAAAAATCTAC+TGG + chr5_2:847902-847921 None:intergenic 25.0%
! TTGATTGATGATAGCAATTG+TGG - chr5_2:838685-838704 Msa0747900:three_prime_UTR 30.0%
!!! AAACCTTGTAGTTTTTTCTC+TGG + chr5_2:838848-838867 None:intergenic 30.0%
ACTTGCAAATTTGGTCTATA+AGG + chr5_2:839137-839156 None:intergenic 30.0%
TATCAAGATAAGATGCATCA+GGG + chr5_2:839229-839248 None:intergenic 30.0%
ATATCAAGATAAGATGCATC+AGG + chr5_2:839230-839249 None:intergenic 30.0%
AAGAAAAAAGGGAAAAGTTG+TGG - chr5_2:839268-839287 Msa0747900:intron 30.0%
! ATTTGAAGTTGAAAGACCTT+GGG - chr5_2:839307-839326 Msa0747900:intron 30.0%
AGATTTGGATTTCAATCCTT+GGG + chr5_2:839354-839373 None:intergenic 30.0%
GTTATCACTATCATCAGATT+TGG + chr5_2:839369-839388 None:intergenic 30.0%
GGCTTTCTCAAAATAACATT+AGG + chr5_2:839464-839483 None:intergenic 30.0%
TTGTCCTCATTATACAAAGA+CGG + chr5_2:839485-839504 None:intergenic 30.0%
TCAAGTTCTTTATTGCAACT+TGG + chr5_2:839815-839834 None:intergenic 30.0%
! AAATTTGAGACTTCATCACT+TGG + chr5_2:840016-840035 None:intergenic 30.0%
AAAGTAGAAGAAGAGAAGTT+TGG - chr5_2:840154-840173 Msa0747900:intron 30.0%
GCTAATCTTTGTTGCAATTA+TGG - chr5_2:840211-840230 Msa0747900:intron 30.0%
CCAACTGAATTTAAATCAGA+CGG + chr5_2:840352-840371 None:intergenic 30.0%
! TTTGAGGTTTGTTTCTCATA+TGG + chr5_2:840516-840535 None:intergenic 30.0%
TGTTGATGTGTTAGATATTC+AGG - chr5_2:840605-840624 Msa0747900:intron 30.0%
TTTATCTTCTGACCATTTAC+AGG - chr5_2:840895-840914 Msa0747900:intron 30.0%
TACCAAAAGAAACCTGTAAA+TGG + chr5_2:840910-840929 None:intergenic 30.0%
! AAGTTTTGCTTGTACATTGA+TGG + chr5_2:841022-841041 None:intergenic 30.0%
ATCAATGTACAAGCAAAACT+TGG - chr5_2:841021-841040 Msa0747900:intron 30.0%
AGATCTTCCAATTTCATATC+TGG + chr5_2:841142-841161 None:intergenic 30.0%
CTTATCATCATTTATTGGAC+AGG - chr5_2:841195-841214 Msa0747900:intron 30.0%
TTTGCTGCAAAACAAAGTAT+TGG + chr5_2:841318-841337 None:intergenic 30.0%
TGAAAAGAAGAGAAATCTCA+TGG - chr5_2:841420-841439 Msa0747900:intron 30.0%
TAACTATTCTTGAATTAGCC+CGG - chr5_2:841460-841479 Msa0747900:intron 30.0%
TTAGATTGAATGCAACAAAG+TGG - chr5_2:841493-841512 Msa0747900:intron 30.0%
! AGTAAGTTATCTTTTGGATG+CGG + chr5_2:841581-841600 None:intergenic 30.0%
TTCATCAATCAGAAATATCG+TGG - chr5_2:841845-841864 Msa0747900:intron 30.0%
TCATCAATCAGAAATATCGT+GGG - chr5_2:841846-841865 Msa0747900:intron 30.0%
! TCAGGTATTTTACTTCTTGA+CGG - chr5_2:841906-841925 Msa0747900:intron 30.0%
CTTGCAAATCATAATAAGAC+TGG + chr5_2:842237-842256 None:intergenic 30.0%
!!! TTGCTTTTATTTTGGACAAG+AGG - chr5_2:842394-842413 Msa0747900:intron 30.0%
!!! TGCTTTTATTTTGGACAAGA+GGG - chr5_2:842395-842414 Msa0747900:intron 30.0%
ACAAAGTTGACAAAAAGAAG+TGG - chr5_2:842496-842515 Msa0747900:intron 30.0%
CAAGATTCTTTATTGTGAAC+CGG - chr5_2:842560-842579 Msa0747900:intron 30.0%
AAGATTCTTTATTGTGAACC+GGG - chr5_2:842561-842580 Msa0747900:intron 30.0%
ATGAACCTCATATTAAATCC+CGG + chr5_2:842582-842601 None:intergenic 30.0%
! CACTAGAAATTTGTATCGAT+TGG - chr5_2:842618-842637 Msa0747900:intron 30.0%
GTGTTCAAGAGAATTATAAC+TGG + chr5_2:842731-842750 None:intergenic 30.0%
ATAATATATGGAAAGGTCGT+GGG + chr5_2:842830-842849 None:intergenic 30.0%
TAGGGACAATGCATAATATA+TGG + chr5_2:842842-842861 None:intergenic 30.0%
GTGTTTATCTTTCTACTGTT+TGG - chr5_2:843034-843053 Msa0747900:intron 30.0%
TTTATCATTAAAGGAGGTCA+CGG - chr5_2:843112-843131 Msa0747900:intron 30.0%
! ACTTACACCTTAGAGTTTTT+AGG + chr5_2:843510-843529 None:intergenic 30.0%
ACACCCACCTAAAATTATTA+AGG - chr5_2:843539-843558 Msa0747900:intron 30.0%
!! GCACCTTAATAATTTTAGGT+GGG + chr5_2:843545-843564 None:intergenic 30.0%
! TGCACCTTAATAATTTTAGG+TGG + chr5_2:843546-843565 None:intergenic 30.0%
AAAAGACAATGACATGCTTA+AGG + chr5_2:843717-843736 None:intergenic 30.0%
!!! ATACACGTGTTTTATTTGGA+AGG - chr5_2:843923-843942 Msa0747900:intron 30.0%
TAATTCACAGATACCGTTTA+TGG - chr5_2:844067-844086 Msa0747900:intron 30.0%
! TGATGGTAGTGATAAATCTA+CGG - chr5_2:844241-844260 Msa0747900:intron 30.0%
AAAATACAACTAATAGGTGG+TGG - chr5_2:844304-844323 Msa0747900:intron 30.0%
GATTATGTGAAGTGTGAAAA+TGG - chr5_2:844379-844398 Msa0747900:intron 30.0%
TTATGTGAAGTGTGAAAATG+GGG - chr5_2:844381-844400 Msa0747900:intron 30.0%
! TTTTCCCCGATTTAAAAAGA+CGG - chr5_2:844550-844569 Msa0747900:intron 30.0%
!! ATGTAATTTTGATACAAGCG+GGG + chr5_2:844615-844634 None:intergenic 30.0%
CAAAAATCAGATTGTTGGAA+TGG - chr5_2:844759-844778 Msa0747900:CDS 30.0%
! CGGAATTCTTTTACAAAATG+CGG - chr5_2:844798-844817 Msa0747900:intron 30.0%
TCAGAAAAACTTGTACACTT+AGG + chr5_2:844959-844978 None:intergenic 30.0%
!!! CCTCAGTTTTTTACAAAATG+TGG + chr5_2:844998-845017 None:intergenic 30.0%
! CCACATTTTGTAAAAAACTG+AGG - chr5_2:844995-845014 Msa0747900:CDS 30.0%
GGTAAAAGTAAGTAAAGTAG+TGG - chr5_2:845017-845036 Msa0747900:CDS 30.0%
TGTTGTTGGATGTTGAAATT+TGG - chr5_2:845048-845067 Msa0747900:intron 30.0%
GTTGTTGGATGTTGAAATTT+GGG - chr5_2:845049-845068 Msa0747900:intron 30.0%
TTGTTGGATGTTGAAATTTG+GGG - chr5_2:845050-845069 Msa0747900:intron 30.0%
CTAACTTATCCTTACAAAAC+CGG - chr5_2:845074-845093 Msa0747900:intron 30.0%
TCTTGAGAAGAGTTATAAAG+AGG + chr5_2:845121-845140 None:intergenic 30.0%
TCTGATACCATGTTGAAATT+TGG - chr5_2:845472-845491 Msa0747900:CDS 30.0%
CTGATACCATGTTGAAATTT+GGG - chr5_2:845473-845492 Msa0747900:CDS 30.0%
TGATACCATGTTGAAATTTG+GGG - chr5_2:845474-845493 Msa0747900:CDS 30.0%
TTAACTCATCCTTACAAAAC+CGG - chr5_2:845498-845517 Msa0747900:CDS 30.0%
CTTGAGAAGAGTTTATAAAG+AGG + chr5_2:845545-845564 None:intergenic 30.0%
ATTTATCAAATGCTGGAATG+CGG + chr5_2:845685-845704 None:intergenic 30.0%
! AATGAATGTTTTCCGCATTT+TGG - chr5_2:845789-845808 Msa0747900:CDS 30.0%
!! GATATTCAAGTTCTGACTTT+TGG - chr5_2:845848-845867 Msa0747900:CDS 30.0%
! AATCATGTTATGCTCGTTTT+TGG - chr5_2:846043-846062 Msa0747900:CDS 30.0%
AACATTTCATAAACCATACG+GGG + chr5_2:846310-846329 None:intergenic 30.0%
!! ATACGTGTTTTTCAATAGTC+TGG + chr5_2:846473-846492 None:intergenic 30.0%
ACGTTATTTATGAACATGGA+AGG + chr5_2:846562-846581 None:intergenic 30.0%
CCATACGTTATTTATGAACA+TGG + chr5_2:846566-846585 None:intergenic 30.0%
CCATGTTCATAAATAACGTA+TGG - chr5_2:846563-846582 Msa0747900:CDS 30.0%
ATGGGAAGCTATTTAATGTT+TGG - chr5_2:846582-846601 Msa0747900:CDS 30.0%
!! CTTGTACTGATTCTCAAATA+TGG + chr5_2:846697-846716 None:intergenic 30.0%
CAAAATACAAGAGGTAATGT+TGG - chr5_2:846737-846756 Msa0747900:CDS 30.0%
AAAAGGAATACAAATGAGAG+GGG + chr5_2:846821-846840 None:intergenic 30.0%
GAAAAAGGAATACAAATGAG+AGG + chr5_2:846823-846842 None:intergenic 30.0%
CAATCAAAACAATGCATTTG+TGG - chr5_2:847052-847071 Msa0747900:CDS 30.0%
!!! AAAAGTTTTTCTGTTGACTC+GGG + chr5_2:847099-847118 None:intergenic 30.0%
!! TTGGTTCTAAACTAAAACCT+TGG + chr5_2:847140-847159 None:intergenic 30.0%
! TTGTGCTTGAAACATGATTT+TGG + chr5_2:847159-847178 None:intergenic 30.0%
ATATTTGAGAAAACCAAGGT+CGG + chr5_2:847183-847202 None:intergenic 30.0%
GAACATATTTGAGAAAACCA+AGG + chr5_2:847187-847206 None:intergenic 30.0%
CAAATAAGTGAACCTTTCTT+TGG + chr5_2:847234-847253 None:intergenic 30.0%
CAAATAGAGTAGAATAGTTG+TGG - chr5_2:847461-847480 Msa0747900:intron 30.0%
ATGTACAATCACCAAAAATC+AGG + chr5_2:847511-847530 None:intergenic 30.0%
!! TTGGTGATTGTACATTCTTT+TGG - chr5_2:847516-847535 Msa0747900:intron 30.0%
! TGGTGATTGTACATTCTTTT+GGG - chr5_2:847517-847536 Msa0747900:intron 30.0%
!! ATCTGACATCATTTTAACCT+AGG + chr5_2:847654-847673 None:intergenic 30.0%
TGCACATATAAAATTAAGGC+TGG - chr5_2:847811-847830 Msa0747900:CDS 30.0%
! AATGAGGTTTTACTAGTGAG+AGG + chr5_2:838744-838763 None:intergenic 35.0%
AAAGAAAGGAAATTGAGCTG+TGG + chr5_2:838775-838794 None:intergenic 35.0%
GAACCAGAGAAAAAACTACA+AGG - chr5_2:838842-838861 Msa0747900:three_prime_UTR 35.0%
!! GTCGTAATTATCAAGTTGAG+GGG + chr5_2:838904-838923 None:intergenic 35.0%
!! GGTCGTAATTATCAAGTTGA+GGG + chr5_2:838905-838924 None:intergenic 35.0%
! AGGTCGTAATTATCAAGTTG+AGG + chr5_2:838906-838925 None:intergenic 35.0%
! ACTTGATAATTACGACCTCA+TGG - chr5_2:838908-838927 Msa0747900:three_prime_UTR 35.0%
GTTTATTATCACCTTGGCAA+GGG + chr5_2:838976-838995 None:intergenic 35.0%
TGTTTATTATCACCTTGGCA+AGG + chr5_2:838977-838996 None:intergenic 35.0%
TTTGTCGATATTGCTAAACC+CGG + chr5_2:839091-839110 None:intergenic 35.0%
!!! GTTTTAGGTATTGGGAAGAA+AGG - chr5_2:839199-839218 Msa0747900:intron 35.0%
CAAGGTCTTTCAACTTCAAA+TGG + chr5_2:839308-839327 None:intergenic 35.0%
! CATTTGAAGTTGAAAGACCT+TGG - chr5_2:839306-839325 Msa0747900:intron 35.0%
GATTTGGATTTCAATCCTTG+GGG + chr5_2:839353-839372 None:intergenic 35.0%
CAGATTTGGATTTCAATCCT+TGG + chr5_2:839355-839374 None:intergenic 35.0%
AAAGCCGTCTTTGTATAATG+AGG - chr5_2:839478-839497 Msa0747900:intron 35.0%
TTGTCTCTTAAAATGCAGAG+TGG - chr5_2:839557-839576 Msa0747900:intron 35.0%
TTAGTGACATGACATTGTTG+AGG - chr5_2:839597-839616 Msa0747900:intron 35.0%
TTGAAAGTGAATTGAAGACG+CGG - chr5_2:839648-839667 Msa0747900:intron 35.0%
AGTTAGTAACTTGACCTTGT+TGG - chr5_2:839691-839710 Msa0747900:intron 35.0%
TCTACTTCTTTATTGCAACC+TGG + chr5_2:839731-839750 None:intergenic 35.0%
TTATTAGAACTTGGTCTGTG+TGG + chr5_2:839890-839909 None:intergenic 35.0%
! AATTTTGCGACTTCATCACT+TGG + chr5_2:839935-839954 None:intergenic 35.0%
AGTCGCAAAATTAACCTTGT+TGG - chr5_2:839943-839962 Msa0747900:intron 35.0%
AGTCTCAAATTTGACCTTGT+TGG - chr5_2:840024-840043 Msa0747900:intron 35.0%
GATTAGCACCTACATCAATT+GGG + chr5_2:840198-840217 None:intergenic 35.0%
AGATTAGCACCTACATCAAT+TGG + chr5_2:840199-840218 None:intergenic 35.0%
CCGTCTGATTTAAATTCAGT+TGG - chr5_2:840349-840368 Msa0747900:intron 35.0%
CAATACAAGGAAAGCCAAAA+AGG - chr5_2:840401-840420 Msa0747900:intron 35.0%
AAACAAACCTCAAAAGCAGT+TGG - chr5_2:840522-840541 Msa0747900:intron 35.0%
! GATATTCAGGTCAGATTTTG+TGG - chr5_2:840618-840637 Msa0747900:intron 35.0%
CTTAATCAAATCTTCTGCCT+TGG + chr5_2:840760-840779 None:intergenic 35.0%
GCAGAAGATTTGATTAAGAC+TGG - chr5_2:840762-840781 Msa0747900:intron 35.0%
AGTACTTACAACAAAACCCT+TGG + chr5_2:840823-840842 None:intergenic 35.0%
! GACCATTTACAGGTTTCTTT+TGG - chr5_2:840905-840924 Msa0747900:intron 35.0%
TTTGACAGAAGATTTCGGTA+TGG + chr5_2:840950-840969 None:intergenic 35.0%
TCCACTTTGACAGAAGATTT+CGG + chr5_2:840955-840974 None:intergenic 35.0%
CATCATTTATTGGACAGGTT+TGG - chr5_2:841200-841219 Msa0747900:intron 35.0%
TTCACTAAGACCAAAAGAGA+AGG - chr5_2:841387-841406 Msa0747900:intron 35.0%
!! GTTAGTTCTTCCTTCTCTTT+TGG + chr5_2:841400-841419 None:intergenic 35.0%
AACTATTCTTGAATTAGCCC+GGG - chr5_2:841461-841480 Msa0747900:intron 35.0%
CAGATTCGTTGTGTTTCTTA+TGG - chr5_2:841520-841539 Msa0747900:intron 35.0%
GAACAAAAATAGGCTAACCA+AGG + chr5_2:841704-841723 None:intergenic 35.0%
AGAGACTGTGGAACAAAAAT+AGG + chr5_2:841714-841733 None:intergenic 35.0%
TTCGTTCATGGAATCAAGTT+CGG - chr5_2:841756-841775 Msa0747900:intron 35.0%
TATTGACCTGTTGTTAATGC+AGG - chr5_2:841801-841820 Msa0747900:intron 35.0%
! CAGGTATTTTACTTCTTGAC+GGG - chr5_2:841907-841926 Msa0747900:intron 35.0%
! AGGTATTTTACTTCTTGACG+GGG - chr5_2:841908-841927 Msa0747900:intron 35.0%
ATAAGACTGGATTCACGATT+CGG + chr5_2:842224-842243 None:intergenic 35.0%
CTTAACTGTGATAATCCGTT+TGG - chr5_2:842308-842327 Msa0747900:intron 35.0%
CATAATATATGGAAAGGTCG+TGG + chr5_2:842831-842850 None:intergenic 35.0%
! TTTGCAATCTATTACTGGCT+TGG - chr5_2:842943-842962 Msa0747900:intron 35.0%
ATCTTTCTACTGTTTGGTAC+AGG - chr5_2:843040-843059 Msa0747900:intron 35.0%
!!! ACACCTTAGAGTTTTTAGGT+GGG + chr5_2:843506-843525 None:intergenic 35.0%
!! TACACCTTAGAGTTTTTAGG+TGG + chr5_2:843507-843526 None:intergenic 35.0%
GTAAATAATCAAGTGGGTGT+AGG + chr5_2:843578-843597 None:intergenic 35.0%
AAGTGGGTGTAAATTAGTGA+AGG + chr5_2:843640-843659 None:intergenic 35.0%
!!! ACGTGTTTTATTTGGAAGGA+TGG - chr5_2:843927-843946 Msa0747900:intron 35.0%
! AGCAATGTGTATTGACGAAT+TGG + chr5_2:844048-844067 None:intergenic 35.0%
AATTTGGTCATTTCTGCTGA+TGG - chr5_2:844224-844243 Msa0747900:intron 35.0%
! GATGGTAGTGATAAATCTAC+GGG - chr5_2:844242-844261 Msa0747900:intron 35.0%
AACTTATACTCCATTGCCTT+TGG - chr5_2:844410-844429 Msa0747900:intron 35.0%
ATCCAAACTCACTTAACCAA+AGG + chr5_2:844429-844448 None:intergenic 35.0%
GGTTAAGTGAGTTTGGATTA+TGG - chr5_2:844431-844450 Msa0747900:intron 35.0%
TTTCCCCGATTTAAAAAGAC+GGG - chr5_2:844551-844570 Msa0747900:intron 35.0%
AAATGCGGTCAAAATTCATG+TGG - chr5_2:844813-844832 Msa0747900:intron 35.0%
AATGCGGTCAAAATTCATGT+GGG - chr5_2:844814-844833 Msa0747900:intron 35.0%
TTCAACATCCAACAACACAT+CGG + chr5_2:845045-845064 None:intergenic 35.0%
!! TGGAAATTCCGCTTTTATTG+CGG + chr5_2:845258-845277 None:intergenic 35.0%
!! TGGAAATTCCGCTTTTATTG+CGG + chr5_2:845258-845277 None:intergenic 35.0%
TTAAGCCCCAAATTTCAACA+TGG + chr5_2:845482-845501 None:intergenic 35.0%
GAGAAGAGTTTATAAAGAGG+AGG + chr5_2:845542-845561 None:intergenic 35.0%
AAATACTATGCACAGAATGC+AGG + chr5_2:845887-845906 None:intergenic 35.0%
!! TTTACTGTCTCGTTGATTTG+TGG - chr5_2:846008-846027 Msa0747900:CDS 35.0%
!!! TTTCAAAAGGCCGTTTTTTC+AGG - chr5_2:846128-846147 Msa0747900:intron 35.0%
! TGCAAACCAAATTTTGTTCC+AGG - chr5_2:846659-846678 Msa0747900:CDS 35.0%
ATATGGATGCCATATAAACC+TGG + chr5_2:846680-846699 None:intergenic 35.0%
TTTATTGGATGAAGATGACG+TGG - chr5_2:846938-846957 Msa0747900:CDS 35.0%
TTATTGGATGAAGATGACGT+GGG - chr5_2:846939-846958 Msa0747900:CDS 35.0%
TGGGTTTCACTTGATTTAGT+TGG - chr5_2:846958-846977 Msa0747900:CDS 35.0%
!!! GGATTGTTGTTTTCAAACCA+TGG - chr5_2:847073-847092 Msa0747900:CDS 35.0%
TAAACTAAAACCTTGGAGTG+TGG + chr5_2:847133-847152 None:intergenic 35.0%
! ACTAAGGTTTTGCCAAAGAA+AGG - chr5_2:847219-847238 Msa0747900:CDS 35.0%
ATCCTTGCTCTTCTAAATGA+AGG - chr5_2:847301-847320 Msa0747900:CDS 35.0%
AACCTTCATTTAGAAGAGCA+AGG + chr5_2:847306-847325 None:intergenic 35.0%
TTGCTCTTCTAAATGAAGGT+TGG - chr5_2:847305-847324 Msa0747900:CDS 35.0%
! AAATGAAGGTTGGCTATTGA+TGG - chr5_2:847315-847334 Msa0747900:CDS 35.0%
! GCTCAAGATGATTACTGATT+AGG + chr5_2:847381-847400 None:intergenic 35.0%
AATCAGTAATCATCTTGAGC+AGG - chr5_2:847381-847400 Msa0747900:intron 35.0%
! ACAAGTCATTGCCTGATTTT+TGG - chr5_2:847497-847516 Msa0747900:intron 35.0%
! GGTGATTGTACATTCTTTTG+GGG - chr5_2:847518-847537 Msa0747900:intron 35.0%
TTCCCAGAAAAAAAAAAGGC+CGG - chr5_2:847614-847633 Msa0747900:intron 35.0%
!! ATCATTTTAACCTAGGAGCA+CGG + chr5_2:847647-847666 None:intergenic 35.0%
GGTAATAAAAATCTACTGGC+TGG + chr5_2:847898-847917 None:intergenic 35.0%
TACTTTCACAACACAACGCA+GGG + chr5_2:838626-838645 None:intergenic 40.0%
GACGACTAGAAAAGTGAAGT+TGG - chr5_2:838655-838674 Msa0747900:three_prime_UTR 40.0%
GACCTCATGGAACTCAAATT+CGG - chr5_2:838921-838940 Msa0747900:three_prime_UTR 40.0%
CTCAAATTCGGTCGTTTACT+TGG - chr5_2:838933-838952 Msa0747900:three_prime_UTR 40.0%
AAGATAAGATGCATCAGGGT+TGG + chr5_2:839225-839244 None:intergenic 40.0%
GGGAAAAGTTGTGGAAATTG+AGG - chr5_2:839277-839296 Msa0747900:intron 40.0%
!!! GGAGGTAATTTTTTTGCCCA+AGG + chr5_2:839326-839345 None:intergenic 40.0%
GATTTCAATCCTTGGGGTTT+GGG + chr5_2:839347-839366 None:intergenic 40.0%
GTATAATGAGGACAAAGACG+AGG - chr5_2:839490-839509 Msa0747900:intron 40.0%
TTCTTACCAATTACCGATCC+AGG + chr5_2:839626-839645 None:intergenic 40.0%
GTTCTTTATTGCAACTTGGC+CGG + chr5_2:839811-839830 None:intergenic 40.0%
AACTTCTCGACTTCATCACT+CGG + chr5_2:839851-839870 None:intergenic 40.0%
! TCTTTGCTACTTGCTCTTTG+TGG + chr5_2:839974-839993 None:intergenic 40.0%
AGCAAAGAAGAAGAGCAGTT+TGG - chr5_2:839986-840005 Msa0747900:intron 40.0%
! ACTTTGTGGCTTTTCCAACA+AGG + chr5_2:840041-840060 None:intergenic 40.0%
! TCTTTGTCACTTGCACTTTG+TGG + chr5_2:840055-840074 None:intergenic 40.0%
AAGTTTGCGACTTCATCACT+TGG + chr5_2:840100-840119 None:intergenic 40.0%
ACAGAAGCAGAAACAATCAG+AGG - chr5_2:840297-840316 Msa0747900:intron 40.0%
TCCTTGTATTGCAGCTTCTA+CGG + chr5_2:840392-840411 None:intergenic 40.0%
! ACAGGTTTCTTTTGGTACCT+TGG - chr5_2:840913-840932 Msa0747900:intron 40.0%
! GTTTCTTTTGGTACCTTGGT+AGG - chr5_2:840917-840936 Msa0747900:intron 40.0%
ACCGAAATCTTCTGTCAAAG+TGG - chr5_2:840951-840970 Msa0747900:intron 40.0%
TGAGTCATGGTTAAGACAGA+AGG - chr5_2:840988-841007 Msa0747900:intron 40.0%
GAGTCATGGTTAAGACAGAA+GGG - chr5_2:840989-841008 Msa0747900:intron 40.0%
!! TGCTGATTCACCTTCACATA+TGG - chr5_2:841084-841103 Msa0747900:intron 40.0%
CCATCATTCTCCATATGTGA+AGG + chr5_2:841097-841116 None:intergenic 40.0%
CCTTCACATATGGAGAATGA+TGG - chr5_2:841094-841113 Msa0747900:intron 40.0%
! CATACGTGTTACTATCAGAC+AGG - chr5_2:841344-841363 Msa0747900:intron 40.0%
ACTATTCTTGAATTAGCCCG+GGG - chr5_2:841462-841481 Msa0747900:intron 40.0%
TTCGTTGTGTTTCTTATGGC+AGG - chr5_2:841524-841543 Msa0747900:intron 40.0%
CTAGCTAAATACAGAGACTG+TGG + chr5_2:841726-841745 None:intergenic 40.0%
GATTCCATGAACGAATATCC+AGG + chr5_2:841751-841770 None:intergenic 40.0%
CTTCAACCTGCATTAACAAC+AGG + chr5_2:841810-841829 None:intergenic 40.0%
! CTGTTGTTAATGCAGGTTGA+AGG - chr5_2:841808-841827 Msa0747900:intron 40.0%
ATAATTAGATGGGTCCAACG+TGG + chr5_2:841875-841894 None:intergenic 40.0%
GTGAACCGGGATTTAATATG+AGG - chr5_2:842574-842593 Msa0747900:intron 40.0%
!!! CTTTTTTTTTTGCCGGTGTC+CGG - chr5_2:842796-842815 Msa0747900:intron 40.0%
!!! TTTTTTTTTTGCCGGTGTCC+GGG - chr5_2:842797-842816 Msa0747900:intron 40.0%
TGGAATCAATTGAGTACCCA+TGG - chr5_2:842981-843000 Msa0747900:intron 40.0%
ACCAGATAAACTCTGCTCTT+GGG - chr5_2:843081-843100 Msa0747900:intron 40.0%
TCAATGGATCACACTGCAAT+AGG + chr5_2:843218-843237 None:intergenic 40.0%
! GACTCTAAGGAGTTCATCAA+TGG + chr5_2:843234-843253 None:intergenic 40.0%
AACTCCTTAGAGTCTGTAGT+TGG - chr5_2:843240-843259 Msa0747900:intron 40.0%
ACACCCACCTAAAAACTCTA+AGG - chr5_2:843500-843519 Msa0747900:CDS 40.0%
! GTATTGACGAATTGGCTGTA+AGG + chr5_2:844040-844059 None:intergenic 40.0%
GAGAGTAGGGTAACCATAAA+CGG + chr5_2:844083-844102 None:intergenic 40.0%
TGGACACTAGATAGAGAGTA+GGG + chr5_2:844096-844115 None:intergenic 40.0%
ATGGACACTAGATAGAGAGT+AGG + chr5_2:844097-844116 None:intergenic 40.0%
!! GCAGCTTGTTATTGACTGAT+AGG + chr5_2:844197-844216 None:intergenic 40.0%
ACAAGCTGCTAGAGTGAATT+TGG - chr5_2:844208-844227 Msa0747900:intron 40.0%
TAAATCTACGGGTCTTTGTG+TGG - chr5_2:844253-844272 Msa0747900:intron 40.0%
AAATCTACGGGTCTTTGTGT+GGG - chr5_2:844254-844273 Msa0747900:intron 40.0%
! CTAATAGGTGGTGGCTTAAA+TGG - chr5_2:844313-844332 Msa0747900:intron 40.0%
AAGTTCACTCCCATGAAGTT+TGG - chr5_2:844338-844357 Msa0747900:intron 40.0%
ACTCACTTAACCAAAGGCAA+TGG + chr5_2:844423-844442 None:intergenic 40.0%
TGCCTTTGGTTAAGTGAGTT+TGG - chr5_2:844424-844443 Msa0747900:intron 40.0%
! AAGTTTTCCCGTCAAAGTTG+GGG + chr5_2:844512-844531 None:intergenic 40.0%
! CAAGTTTTCCCGTCAAAGTT+GGG + chr5_2:844513-844532 None:intergenic 40.0%
! TCAAGTTTTCCCGTCAAAGT+TGG + chr5_2:844514-844533 None:intergenic 40.0%
ACGGGAAAACTTGAATTGAC+TGG - chr5_2:844520-844539 Msa0747900:intron 40.0%
CGGGAAAACTTGAATTGACT+GGG - chr5_2:844521-844540 Msa0747900:intron 40.0%
TTCCCCGATTTAAAAAGACG+GGG - chr5_2:844552-844571 Msa0747900:intron 40.0%
!! TAATTTTGATACAAGCGGGG+CGG + chr5_2:844612-844631 None:intergenic 40.0%
ATGGCGTAAGTTTGCACTTT+CGG - chr5_2:844778-844797 Msa0747900:intron 40.0%
ATGCGGTCAAAATTCATGTG+GGG - chr5_2:844815-844834 Msa0747900:intron 40.0%
! GTTCTATTTTCACCCCTGTT+GGG - chr5_2:844879-844898 Msa0747900:intron 40.0%
ACCAATACCAATTCCCAACA+GGG + chr5_2:844895-844914 None:intergenic 40.0%
TACCAATACCAATTCCCAAC+AGG + chr5_2:844896-844915 None:intergenic 40.0%
!! TTGGGAATTGGTATTGGTAC+AGG - chr5_2:844897-844916 Msa0747900:intron 40.0%
!! TGGGAATTGGTATTGGTACA+GGG - chr5_2:844898-844917 Msa0747900:intron 40.0%
!! TCTTACAAGCCGGTTTTGTA+AGG + chr5_2:845086-845105 None:intergenic 40.0%
AGAGTCCTATCTATCCAATG+TGG - chr5_2:845138-845157 Msa0747900:intron 40.0%
GAGTCCTATCTATCCAATGT+GGG - chr5_2:845139-845158 Msa0747900:intron 40.0%
TAGTCCCACATTGGATAGAT+AGG + chr5_2:845146-845165 None:intergenic 40.0%
CCTATCCTAGATCTATCGTT+GGG + chr5_2:845451-845470 None:intergenic 40.0%
!! ACTTACAAGCCGGTTTTGTA+AGG + chr5_2:845510-845529 None:intergenic 40.0%
AGAGTCTCATCTATCTGATG+TGG - chr5_2:845563-845582 Msa0747900:CDS 40.0%
GAGTCTCATCTATCTGATGT+GGG - chr5_2:845564-845583 Msa0747900:CDS 40.0%
!! TTCATTGTGTTGGCTTTGAG+GGG + chr5_2:845602-845621 None:intergenic 40.0%
!! CTTCATTGTGTTGGCTTTGA+GGG + chr5_2:845603-845622 None:intergenic 40.0%
! TGAATAGCGGAACCAAAATG+CGG + chr5_2:845804-845823 None:intergenic 40.0%
AGAATGCAGGCATAACCAAA+GGG + chr5_2:845874-845893 None:intergenic 40.0%
!! TTATGCTCGTTTTTGGACAG+TGG - chr5_2:846050-846069 Msa0747900:CDS 40.0%
TGTGTCCATACCTGAAATGT+GGG + chr5_2:846169-846188 None:intergenic 40.0%
ATGTGTCCATACCTGAAATG+TGG + chr5_2:846170-846189 None:intergenic 40.0%
TGAGCTGGCATTATGAATCA+TGG - chr5_2:846281-846300 Msa0747900:CDS 40.0%
GTTCAAACACAGCTCAACTA+AGG - chr5_2:847203-847222 Msa0747900:CDS 40.0%
TAATCATCTTGAGCAGGTGA+TGG - chr5_2:847387-847406 Msa0747900:intron 40.0%
!! AATGACTTGTTTAGAGGCAC+AGG + chr5_2:847487-847506 None:intergenic 40.0%
!! TCAGGCAATGACTTGTTTAG+AGG + chr5_2:847493-847512 None:intergenic 40.0%
TCCCAGAAAAAAAAAAGGCC+GGG - chr5_2:847615-847634 Msa0747900:intron 40.0%
!!! ACCCGGCCTTTTTTTTTTCT+GGG + chr5_2:847619-847638 None:intergenic 40.0%
CTACTTTCACAACACAACGC+AGG + chr5_2:838627-838646 None:intergenic 45.0%
! GAAATTGAGCTGTGGTAGTG+AGG + chr5_2:838767-838786 None:intergenic 45.0%
! GACCGAATTTGAGTTCCATG+AGG + chr5_2:838926-838945 None:intergenic 45.0%
!! GGGACAACACAATTTTCAGG+TGG + chr5_2:839055-839074 None:intergenic 45.0%
! ACGGGGACAACACAATTTTC+AGG + chr5_2:839058-839077 None:intergenic 45.0%
TAAACCCGGTCGGGTTTAAA+CGG + chr5_2:839077-839096 None:intergenic 45.0%
TCGATATTGCTAAACCCGGT+CGG + chr5_2:839087-839106 None:intergenic 45.0%
TCATCATTGCCAGTTGAGCT+AGG - chr5_2:839111-839130 Msa0747900:exon 45.0%
TCTATAAGGCCTAGCTCAAC+TGG + chr5_2:839123-839142 None:intergenic 45.0%
AAATTACCTCCCAAACCCCA+AGG - chr5_2:839335-839354 Msa0747900:intron 45.0%
GGATTTCAATCCTTGGGGTT+TGG + chr5_2:839348-839367 None:intergenic 45.0%
AGAAACCTAATGAAGCCCTG+CGG - chr5_2:839408-839427 Msa0747900:intron 45.0%
AATGCAGAGTGGACAAGTGA+AGG - chr5_2:839568-839587 Msa0747900:intron 45.0%
ATGACATTGTTGAGGAAGCC+TGG - chr5_2:839605-839624 Msa0747900:intron 45.0%
ATTGTTGAGGAAGCCTGGAT+CGG - chr5_2:839610-839629 Msa0747900:intron 45.0%
TCTGTGTGGTTGTTCCAACA+AGG + chr5_2:839708-839727 None:intergenic 45.0%
TTATTGCAACCTGGTCTGTG+TGG + chr5_2:839722-839741 None:intergenic 45.0%
AGTCGAGAAGTTGACCTTGT+TGG - chr5_2:839859-839878 Msa0747900:CDS 45.0%
TCTTTGTGGCTGTTCCAACA+AGG + chr5_2:839960-839979 None:intergenic 45.0%
GAAACAATCAGAGGTCCATC+AGG - chr5_2:840306-840325 Msa0747900:intron 45.0%
TCCGTAGAAGCTGCAATACA+AGG - chr5_2:840388-840407 Msa0747900:intron 45.0%
!! CTCTTCTCCAACTGCTTTTG+AGG + chr5_2:840532-840551 None:intergenic 45.0%
CGTCGAAACAGTGATGAATC+AGG - chr5_2:840576-840595 Msa0747900:intron 45.0%
!! GACTGGAGATAGAGTTGATG+TGG - chr5_2:840779-840798 Msa0747900:intron 45.0%
GTAGTAAGCTGCAATGCCAA+GGG - chr5_2:840804-840823 Msa0747900:intron 45.0%
GTATGGCAGAAATCCTACCA+AGG + chr5_2:840933-840952 None:intergenic 45.0%
ATGGTTAAGACAGAAGGGCT+TGG - chr5_2:840994-841013 Msa0747900:intron 45.0%
! TCAATCTAAAACACCTGCCC+CGG + chr5_2:841482-841501 None:intergenic 45.0%
TTAAGCCAGCAGAAGTTCCT+TGG - chr5_2:841684-841703 Msa0747900:intron 45.0%
CTCTGTATTTAGCTAGTGCC+TGG - chr5_2:841730-841749 Msa0747900:intron 45.0%
AGTGCCTGGATATTCGTTCA+TGG - chr5_2:841744-841763 Msa0747900:intron 45.0%
TCATGGAATCAAGTTCGGAG+AGG - chr5_2:841761-841780 Msa0747900:intron 45.0%
AATATCGTGGGATTCCACGT+TGG - chr5_2:841858-841877 Msa0747900:intron 45.0%
!!! TTTTTTTTTGCCGGTGTCCG+GGG - chr5_2:842798-842817 Msa0747900:intron 45.0%
! TGAGCTTAGCTCAGTTGGTA+GGG + chr5_2:842860-842879 None:intergenic 45.0%
CTTGGCGCTTTCAATATGGA+TGG - chr5_2:842961-842980 Msa0747900:intron 45.0%
CTGTTTGGTACAGGTTGTAG+AGG - chr5_2:843049-843068 Msa0747900:intron 45.0%
CACCAGATAAACTCTGCTCT+TGG - chr5_2:843080-843099 Msa0747900:intron 45.0%
TGGATCACACTGCAATAGGA+AGG + chr5_2:843214-843233 None:intergenic 45.0%
GTCTCCAACTACAGACTCTA+AGG + chr5_2:843247-843266 None:intergenic 45.0%
GAGACCATGAACCCTTTGAT+GGG - chr5_2:843262-843281 Msa0747900:intron 45.0%
ATCTCCCATCAAAGGGTTCA+TGG + chr5_2:843269-843288 None:intergenic 45.0%
TGAACCCTTTGATGGGAGAT+TGG - chr5_2:843269-843288 Msa0747900:intron 45.0%
GCTTCCAATCTCCCATCAAA+GGG + chr5_2:843276-843295 None:intergenic 45.0%
TGCTTCCAATCTCCCATCAA+AGG + chr5_2:843277-843296 None:intergenic 45.0%
CATACACGTGGGGTAGAAAA+GGG + chr5_2:844129-844148 None:intergenic 45.0%
ACATACACGTGGGGTAGAAA+AGG + chr5_2:844130-844149 None:intergenic 45.0%
TGAAGTGTGAAAATGGGGCA+AGG - chr5_2:844386-844405 Msa0747900:intron 45.0%
GATTATGGTAAGACCCACCT+TGG - chr5_2:844446-844465 Msa0747900:intron 45.0%
TCCCCGATTTAAAAAGACGG+GGG - chr5_2:844553-844572 Msa0747900:intron 45.0%
!! AATTTTGATACAAGCGGGGC+GGG + chr5_2:844611-844630 None:intergenic 45.0%
TGCGGTCAAAATTCATGTGG+GGG - chr5_2:844816-844835 Msa0747900:intron 45.0%
GTCAAAATTCATGTGGGGGT+GGG - chr5_2:844820-844839 Msa0747900:intron 45.0%
TCAAAATTCATGTGGGGGTG+GGG - chr5_2:844821-844840 Msa0747900:intron 45.0%
! GGTTCTATTTTCACCCCTGT+TGG - chr5_2:844878-844897 Msa0747900:intron 45.0%
! TTTTCACCCCTGTTGGGAAT+TGG - chr5_2:844885-844904 Msa0747900:intron 45.0%
CCAATACCAATTCCCAACAG+GGG + chr5_2:844894-844913 None:intergenic 45.0%
AGGGATACCAGAACTCCATT+GGG - chr5_2:844917-844936 Msa0747900:intron 45.0%
TACCAGAACTCCATTGGGTT+TGG - chr5_2:844922-844941 Msa0747900:intron 45.0%
ACCAGAACTCCATTGGGTTT+GGG - chr5_2:844923-844942 Msa0747900:intron 45.0%
TAGTGGTTCCGATGTGTTGT+TGG - chr5_2:845034-845053 Msa0747900:CDS 45.0%
!! CAAAACCGGCTTGTAAGATG+AGG - chr5_2:845088-845107 Msa0747900:intron 45.0%
ACACTCCTCATCTTACAAGC+CGG + chr5_2:845096-845115 None:intergenic 45.0%
GGGTGTATTTAGTCCCACAT+TGG + chr5_2:845155-845174 None:intergenic 45.0%
!! TTCGTTGTGTTGGCTTTGAG+GGG + chr5_2:845175-845194 None:intergenic 45.0%
!! CTTCGTTGTGTTGGCTTTGA+GGG + chr5_2:845176-845195 None:intergenic 45.0%
CTGCAATGAAGGCAAACCAA+AGG - chr5_2:845206-845225 Msa0747900:CDS 45.0%
CAAACCAAAGGCCGCAATTT+AGG - chr5_2:845218-845237 Msa0747900:CDS 45.0%
CTGCAATGAAGGCAAACCAA+AGG - chr5_2:845206-845225 Msa0747900:CDS 45.0%
CAAACCAAAGGCCGCAATTT+AGG - chr5_2:845218-845237 Msa0747900:CDS 45.0%
! CCCAACGATAGATCTAGGAT+AGG - chr5_2:845448-845467 Msa0747900:CDS 45.0%
GCCTATCCTAGATCTATCGT+TGG + chr5_2:845452-845471 None:intergenic 45.0%
!! CAAAACCGGCTTGTAAGTTG+TGG - chr5_2:845512-845531 Msa0747900:CDS 45.0%
!! TCATTGTGTTGGCTTTGAGG+GGG + chr5_2:845601-845620 None:intergenic 45.0%
!! CCTTCATTGTGTTGGCTTTG+AGG + chr5_2:845604-845623 None:intergenic 45.0%
CCTCAAAGCCAACACAATGA+AGG - chr5_2:845601-845620 Msa0747900:CDS 45.0%
! AGCCAACACAATGAAGGTGT+TGG - chr5_2:845607-845626 Msa0747900:CDS 45.0%
CTCCAACACCTTCATTGTGT+TGG + chr5_2:845612-845631 None:intergenic 45.0%
!! CAACACAATGAAGGTGTTGG+AGG - chr5_2:845610-845629 Msa0747900:CDS 45.0%
CTGCAATGAAGGCAAACCTA+AGG - chr5_2:845633-845652 Msa0747900:CDS 45.0%
CAAACCTAAGGCCGCAATTT+AGG - chr5_2:845645-845664 Msa0747900:CDS 45.0%
! TAAACCGGTTCAGTGTCTGA+AGG - chr5_2:845725-845744 Msa0747900:intron 45.0%
TGTACCTTCAGACACTGAAC+CGG + chr5_2:845732-845751 None:intergenic 45.0%
!! AGTTCTGACTTTTGGCCCTT+TGG - chr5_2:845856-845875 Msa0747900:intron 45.0%
CAGAATGCAGGCATAACCAA+AGG + chr5_2:845875-845894 None:intergenic 45.0%
GGCATCCAGTCAGTTTCAAA+AGG - chr5_2:846115-846134 Msa0747900:intron 45.0%
!!! AACGGCCTTTTGAAACTGAC+TGG + chr5_2:846123-846142 None:intergenic 45.0%
AACCAGGGCTCCTGAAAAAA+CGG + chr5_2:846141-846160 None:intergenic 45.0%
GAAATGTGGGAGCTAAACCA+GGG + chr5_2:846156-846175 None:intergenic 45.0%
TGAAATGTGGGAGCTAAACC+AGG + chr5_2:846157-846176 None:intergenic 45.0%
! TGGTTTAGCTCCCACATTTC+AGG - chr5_2:846156-846175 Msa0747900:intron 45.0%
! TAGCTCCCACATTTCAGGTA+TGG - chr5_2:846161-846180 Msa0747900:intron 45.0%
TGAATCATGGATTCCCCGTA+TGG - chr5_2:846294-846313 Msa0747900:CDS 45.0%
TTCCTCATTTCCACACTCCA+AGG - chr5_2:847120-847139 Msa0747900:CDS 45.0%
AACCTTGGAGTGTGGAAATG+AGG + chr5_2:847125-847144 None:intergenic 45.0%
TTTCAAGCACAATCCGACCT+TGG - chr5_2:847167-847186 Msa0747900:CDS 45.0%
! GGTGATGGTTCAAACGTCTT+TGG - chr5_2:847402-847421 Msa0747900:intron 45.0%
!! TACATTCTTTTGGGGAGTGC+TGG - chr5_2:847526-847545 Msa0747900:intron 45.0%
TATACAAGAGGTTTGTGGCG+TGG - chr5_2:847578-847597 Msa0747900:intron 45.0%
ATACAAGAGGTTTGTGGCGT+GGG - chr5_2:847579-847598 Msa0747900:intron 45.0%
!!! CACCCGGCCTTTTTTTTTTC+TGG + chr5_2:847620-847639 None:intergenic 45.0%
CAGAAAAAAAAAAGGCCGGG+TGG - chr5_2:847618-847637 Msa0747900:intron 45.0%
!! AAAAATAGATAAATTTATTT+GGG + chr5_2:841248-841267 None:intergenic 5.0%
!!! AAGATATTTTATATTTATTT+TGG - chr5_2:841993-842012 Msa0747900:intron 5.0%
!! ATATATATATATATATATAG+AGG - chr5_2:843467-843486 Msa0747900:intron 5.0%
!! ATATATATATATATATATAG+GGG + chr5_2:843467-843486 None:intergenic 5.0%
!!! TTTTTATTTATTTTTTAAAC+CGG - chr5_2:845710-845729 Msa0747900:intron 5.0%
GAGAGGAAGAGACCCCATTT+CGG + chr5_2:838727-838746 None:intergenic 50.0%
! AGCTGTGGTAGTGAGGAATG+AGG + chr5_2:838760-838779 None:intergenic 50.0%
GTCTTCATCGCGTGAAGATG+AGG + chr5_2:838874-838893 None:intergenic 50.0%
AAACCCGGTCGGGTTTAAAC+GGG + chr5_2:839076-839095 None:intergenic 50.0%
CGATATTGCTAAACCCGGTC+GGG + chr5_2:839086-839105 None:intergenic 50.0%
TTCAATCCTTGGGGTTTGGG+AGG + chr5_2:839344-839363 None:intergenic 50.0%
AACATTTCCGGGTTTCCGCA+GGG + chr5_2:839426-839445 None:intergenic 50.0%
TAACATTTCCGGGTTTCCGC+AGG + chr5_2:839427-839446 None:intergenic 50.0%
TGAGGACAAAGACGAGGATG+AGG - chr5_2:839496-839515 Msa0747900:intron 50.0%
AGGAAGCCTGGATCGGTAAT+TGG - chr5_2:839617-839636 Msa0747900:intron 50.0%
TTGGAACAACCACACAGACC+AGG - chr5_2:839710-839729 Msa0747900:intron 50.0%
CCTTGTTAGAACAGCCACAC+CGG - chr5_2:839789-839808 Msa0747900:intron 50.0%
TTATTGCAACTTGGCCGGTG+TGG + chr5_2:839806-839825 None:intergenic 50.0%
TCTGTGTGGCTGTTCCAACA+AGG + chr5_2:839876-839895 None:intergenic 50.0%
TTGCAACAGCCACAAAGAGC+AGG - chr5_2:840127-840146 Msa0747900:intron 50.0%
ACTTTGTCGCCTGCTCTTTG+TGG + chr5_2:840139-840158 None:intergenic 50.0%
GTTTGGAGATGTGAGAGTCG+TGG - chr5_2:840171-840190 Msa0747900:intron 50.0%
GTCGTGGTCCCAATTGATGT+AGG - chr5_2:840187-840206 Msa0747900:intron 50.0%
ACTTCCAGGATCAAGGGAAG+CGG + chr5_2:840556-840575 None:intergenic 50.0%
TCGACGACTTCCAGGATCAA+GGG + chr5_2:840562-840581 None:intergenic 50.0%
TTCGACGACTTCCAGGATCA+AGG + chr5_2:840563-840582 None:intergenic 50.0%
TCACTGTTTCGACGACTTCC+AGG + chr5_2:840570-840589 None:intergenic 50.0%
AGGAAGGCGAAGATGCTGAT+TGG - chr5_2:840733-840752 Msa0747900:intron 50.0%
! CGAAGATGCTGATTGGACCA+AGG - chr5_2:840740-840759 Msa0747900:intron 50.0%
CGTAGTAAGCTGCAATGCCA+AGG - chr5_2:840803-840822 Msa0747900:intron 50.0%
! CAATCTAAAACACCTGCCCC+GGG + chr5_2:841481-841500 None:intergenic 50.0%
TGGCAGGCTAGACTTCAAGT+TGG - chr5_2:841540-841559 Msa0747900:intron 50.0%
GCTAACCAAGGAACTTCTGC+TGG + chr5_2:841692-841711 None:intergenic 50.0%
TGGAATCAAGTTCGGAGAGG+TGG - chr5_2:841764-841783 Msa0747900:intron 50.0%
GTGAGCTTAGCTCAGTTGGT+AGG + chr5_2:842861-842880 None:intergenic 50.0%
!! CTGGCTTGGCGCTTTCAATA+TGG - chr5_2:842957-842976 Msa0747900:intron 50.0%
GCCCAAGAGCAGAGTTTATC+TGG + chr5_2:843085-843104 None:intergenic 50.0%
GGAGACCATGAACCCTTTGA+TGG - chr5_2:843261-843280 Msa0747900:intron 50.0%
GACGAGCAAACATACACGTG+GGG + chr5_2:844139-844158 None:intergenic 50.0%
CGACGAGCAAACATACACGT+GGG + chr5_2:844140-844159 None:intergenic 50.0%
TCGACGAGCAAACATACACG+TGG + chr5_2:844141-844160 None:intergenic 50.0%
TATGGTAAGACCCACCTTGG+TGG - chr5_2:844449-844468 Msa0747900:intron 50.0%
AAGTTGGGGTGGATACCCAT+GGG + chr5_2:844498-844517 None:intergenic 50.0%
AAAGTTGGGGTGGATACCCA+TGG + chr5_2:844499-844518 None:intergenic 50.0%
GGTATCCACCCCAACTTTGA+CGG - chr5_2:844501-844520 Msa0747900:intron 50.0%
GTATCCACCCCAACTTTGAC+GGG - chr5_2:844502-844521 Msa0747900:intron 50.0%
! TTTTCCCGTCAAAGTTGGGG+TGG + chr5_2:844509-844528 None:intergenic 50.0%
! GCCCCCGTCTTTTTAAATCG+GGG + chr5_2:844557-844576 None:intergenic 50.0%
! CGCCCCCGTCTTTTTAAATC+GGG + chr5_2:844558-844577 None:intergenic 50.0%
! CCGCCCCCGTCTTTTTAAAT+CGG + chr5_2:844559-844578 None:intergenic 50.0%
CCGATTTAAAAAGACGGGGG+CGG - chr5_2:844556-844575 Msa0747900:intron 50.0%
CGATTTAAAAAGACGGGGGC+GGG - chr5_2:844557-844576 Msa0747900:intron 50.0%
GGTCAAAATTCATGTGGGGG+TGG - chr5_2:844819-844838 Msa0747900:intron 50.0%
CCCCTGTTGGGAATTGGTAT+TGG - chr5_2:844891-844910 Msa0747900:intron 50.0%
CAGGGATACCAGAACTCCAT+TGG - chr5_2:844916-844935 Msa0747900:intron 50.0%
CCAGAACTCCATTGGGTTTG+GGG - chr5_2:844924-844943 Msa0747900:intron 50.0%
!! CCTTCGTTGTGTTGGCTTTG+AGG + chr5_2:845177-845196 None:intergenic 50.0%
CCTCAAAGCCAACACAACGA+AGG - chr5_2:845174-845193 Msa0747900:CDS 50.0%
! AGCCAACACAACGAAGGTGT+CGG - chr5_2:845180-845199 Msa0747900:CDS 50.0%
ACTCCTCGTCGCCTAAATTG+CGG + chr5_2:845232-845251 None:intergenic 50.0%
GGAGTGGACCGCAATAAAAG+CGG - chr5_2:845247-845266 Msa0747900:CDS 50.0%
ACTCCTCGTCGCCTAAATTG+CGG + chr5_2:845232-845251 None:intergenic 50.0%
GGAGTGGACCGCAATAAAAG+CGG - chr5_2:845247-845266 Msa0747900:CDS 50.0%
GGAAGCCCAACGATAGATCT+AGG - chr5_2:845443-845462 Msa0747900:CDS 50.0%
GCACTCCACAACTTACAAGC+CGG + chr5_2:845520-845539 None:intergenic 50.0%
!! CATTGTGTTGGCTTTGAGGG+GGG + chr5_2:845600-845619 None:intergenic 50.0%
GTCACCTAAATTGCGGCCTT+AGG + chr5_2:845652-845671 None:intergenic 50.0%
AGGCCGCAATTTAGGTGACT+AGG - chr5_2:845653-845672 Msa0747900:CDS 50.0%
GGCCGCAATTTAGGTGACTA+GGG - chr5_2:845654-845673 Msa0747900:CDS 50.0%
GCCGCAATTTAGGTGACTAG+GGG - chr5_2:845655-845674 Msa0747900:CDS 50.0%
GCCCCTAGTCACCTAAATTG+CGG + chr5_2:845659-845678 None:intergenic 50.0%
GCAATTTAGGTGACTAGGGG+CGG - chr5_2:845658-845677 Msa0747900:CDS 50.0%
!!! TTTTCTGTTGACTCGGGCCA+TGG + chr5_2:847093-847112 None:intergenic 50.0%
TTAAGGCTGGCATTGTGCAG+AGG - chr5_2:847824-847843 Msa0747900:CDS 50.0%
CCTTGGCAAGGGTGAGCTTA+GGG + chr5_2:838965-838984 None:intergenic 55.0%
ACCTTGGCAAGGGTGAGCTT+AGG + chr5_2:838966-838985 None:intergenic 55.0%
TGTCCCCGTTTAAACCCGAC+CGG - chr5_2:839069-839088 Msa0747900:three_prime_UTR 55.0%
AACCCGGTCGGGTTTAAACG+GGG + chr5_2:839075-839094 None:intergenic 55.0%
GGTTTCCGCAGGGCTTCATT+AGG + chr5_2:839416-839435 None:intergenic 55.0%
AATGAAGCCCTGCGGAAACC+CGG - chr5_2:839416-839435 Msa0747900:intron 55.0%
CAAAGACGAGGATGAGGACG+TGG - chr5_2:839502-839521 Msa0747900:intron 55.0%
AGGACGTGGACATGTCTTCG+AGG - chr5_2:839516-839535 Msa0747900:intron 55.0%
CCGGTGTGGCTGTTCTAACA+AGG + chr5_2:839792-839811 None:intergenic 55.0%
TTCTTGAATTAGCCCGGGGC+AGG - chr5_2:841466-841485 Msa0747900:intron 55.0%
AAGGTCGTGGGTTCAAACCC+CGG + chr5_2:842818-842837 None:intergenic 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG + chr5_2:842865-842884 None:intergenic 55.0%
CCAACTGAGCTAAGCTCACG+AGG - chr5_2:842862-842881 Msa0747900:intron 55.0%
! GTAAGACCCACCTTGGTGGT+AGG - chr5_2:844453-844472 Msa0747900:intron 55.0%
TGTTGCCATGCCTACCACCA+AGG + chr5_2:844466-844485 None:intergenic 55.0%
GCAACAGAACCCGTACCCAT+GGG - chr5_2:844480-844499 Msa0747900:intron 55.0%
AAATTCATGTGGGGGTGGGG+TGG - chr5_2:844824-844843 Msa0747900:intron 55.0%
AATTCATGTGGGGGTGGGGT+GGG - chr5_2:844825-844844 Msa0747900:intron 55.0%
ATACCCGAACCTGTCGGGTA+TGG - chr5_2:844849-844868 Msa0747900:intron 55.0%
TACCCGAACCTGTCGGGTAT+GGG - chr5_2:844850-844869 Msa0747900:intron 55.0%
CCCCAAACCCAATGGAGTTC+TGG + chr5_2:844927-844946 None:intergenic 55.0%
ACTCCATTGGGTTTGGGGAC+AGG - chr5_2:844929-844948 Msa0747900:intron 55.0%
CTCCATTGGGTTTGGGGACA+GGG - chr5_2:844930-844949 Msa0747900:intron 55.0%
ATCCCTGTCCCCAAACCCAA+TGG + chr5_2:844935-844954 None:intergenic 55.0%
CTCCGACACCTTCGTTGTGT+TGG + chr5_2:845185-845204 None:intergenic 55.0%
!! CAACACAACGAAGGTGTCGG+AGG - chr5_2:845183-845202 Msa0747900:CDS 55.0%
GTCGCCTAAATTGCGGCCTT+TGG + chr5_2:845225-845244 None:intergenic 55.0%
GCAATTTAGGCGACGAGGAG+TGG - chr5_2:845231-845250 Msa0747900:CDS 55.0%
ATTGCAGCCTCCGACCCATT+GGG + chr5_2:845305-845324 None:intergenic 55.0%
GTCGCCTAAATTGCGGCCTT+TGG + chr5_2:845225-845244 None:intergenic 55.0%
GCAATTTAGGCGACGAGGAG+TGG - chr5_2:845231-845250 Msa0747900:CDS 55.0%
GTCCACGCTTCAGACCCATT+GGG + chr5_2:845417-845436 None:intergenic 55.0%
TGTCCACGCTTCAGACCCAT+TGG + chr5_2:845418-845437 None:intergenic 55.0%
! GGTCTGAAGCGTGGACAATG+CGG - chr5_2:845421-845440 Msa0747900:CDS 55.0%
! GTCTGAAGCGTGGACAATGC+GGG - chr5_2:845422-845441 Msa0747900:CDS 55.0%
! GGTGTTGGAGGCTGCAATGA+AGG - chr5_2:845622-845641 Msa0747900:CDS 55.0%
!! GGAGTGCTGGCTGCAATCAA+AGG - chr5_2:847539-847558 Msa0747900:intron 55.0%
!! AGTGCTCTAAGGGCACTCGT+TGG + chr5_2:847964-847983 None:intergenic 55.0%
CCCTAAGCTCACCCTTGCCA+AGG - chr5_2:838962-838981 Msa0747900:three_prime_UTR 60.0%
GTCCCCGTTTAAACCCGACC+GGG - chr5_2:839070-839089 Msa0747900:three_prime_UTR 60.0%
GAGACCGCTTCCCTTGATCC+TGG - chr5_2:840549-840568 Msa0747900:intron 60.0%
TGGGTTCAAACCCCGGACAC+CGG + chr5_2:842811-842830 None:intergenic 60.0%
! ACCCACCTTGGTGGTAGGCA+TGG - chr5_2:844458-844477 Msa0747900:intron 60.0%
GCCATGCCTACCACCAAGGT+GGG + chr5_2:844462-844481 None:intergenic 60.0%
TGCCATGCCTACCACCAAGG+TGG + chr5_2:844463-844482 None:intergenic 60.0%
GGCAACAGAACCCGTACCCA+TGG - chr5_2:844479-844498 Msa0747900:intron 60.0%
GGGTGGATACCCATGGGTAC+GGG + chr5_2:844492-844511 None:intergenic 60.0%
GGGGTGGATACCCATGGGTA+CGG + chr5_2:844493-844512 None:intergenic 60.0%
AAAGACGGGGGCGGGTAATG+TGG - chr5_2:844565-844584 Msa0747900:intron 60.0%
! ATACAAGCGGGGCGGGTTTG+GGG + chr5_2:844604-844623 None:intergenic 60.0%
! GATACAAGCGGGGCGGGTTT+GGG + chr5_2:844605-844624 None:intergenic 60.0%
! TGATACAAGCGGGGCGGGTT+TGG + chr5_2:844606-844625 None:intergenic 60.0%
ATTCATGTGGGGGTGGGGTG+GGG - chr5_2:844826-844845 Msa0747900:intron 60.0%
GTGGGGATACCCGAACCTGT+CGG - chr5_2:844843-844862 Msa0747900:intron 60.0%
TGGGGATACCCGAACCTGTC+GGG - chr5_2:844844-844863 Msa0747900:intron 60.0%
ACCCGAACCTGTCGGGTATG+GGG - chr5_2:844851-844870 Msa0747900:intron 60.0%
AGCCCCATACCCGACAGGTT+CGG + chr5_2:844856-844875 None:intergenic 60.0%
AACCTGTCGGGTATGGGGCT+GGG - chr5_2:844856-844875 Msa0747900:intron 60.0%
! GGTGTCGGAGGCTGCAATGA+AGG - chr5_2:845195-845214 Msa0747900:CDS 60.0%
AGGCCGCAATTTAGGCGACG+AGG - chr5_2:845226-845245 Msa0747900:CDS 60.0%
! GCTGAAGCGTGAGGGTGTGT+TGG + chr5_2:845278-845297 None:intergenic 60.0%
CATTGCAGCCTCCGACCCAT+TGG + chr5_2:845306-845325 None:intergenic 60.0%
TGGGTCGGAGGCTGCAATGA+AGG - chr5_2:845307-845326 Msa0747900:intron 60.0%
AGGCCGCAATTTAGGCGACG+AGG - chr5_2:845226-845245 Msa0747900:CDS 60.0%
! GCTGAAGCGTGAGGGTGTGT+TGG + chr5_2:845278-845297 None:intergenic 60.0%
ACGCTTCAGACCCATTGGGC+CGG + chr5_2:845413-845432 None:intergenic 60.0%
!! TGTGTTGGCTTTGAGGGGGG+TGG + chr5_2:845597-845616 None:intergenic 60.0%
!!! GGCCGTTTTTTCAGGAGCCC+TGG - chr5_2:846136-846155 Msa0747900:intron 60.0%
! CTAGGAGCACGGATTCCACC+CGG + chr5_2:847636-847655 None:intergenic 60.0%
GCTGGCATTGTGCAGAGGCT+TGG - chr5_2:847829-847848 Msa0747900:CDS 60.0%
GCCCCATACCCGACAGGTTC+GGG + chr5_2:844855-844874 None:intergenic 65.0%
GAACCTGTCGGGTATGGGGC+TGG - chr5_2:844855-844874 Msa0747900:intron 65.0%
ACCTGTCGGGTATGGGGCTG+GGG - chr5_2:844857-844876 Msa0747900:intron 65.0%
CACACCCTCACGCTTCAGCC+CGG - chr5_2:845279-845298 Msa0747900:intron 65.0%
ACGCTTCAGCCCGGCCCAAT+GGG - chr5_2:845288-845307 Msa0747900:intron 65.0%
TTCAGCCCGGCCCAATGGGT+CGG - chr5_2:845292-845311 Msa0747900:intron 65.0%
CACACCCTCACGCTTCAGCC+CGG - chr5_2:845279-845298 Msa0747900:intron 65.0%
ACGCTTCAGCCCGGCCCAAT+GGG - chr5_2:845288-845307 Msa0747900:intron 65.0%
CGCTTCAGACCCATTGGGCC+GGG + chr5_2:845412-845431 None:intergenic 65.0%
! GGCCCAATGGGTCTGAAGCG+TGG - chr5_2:845412-845431 Msa0747900:CDS 65.0%
CGGGTGGAATCCGTGCTCCT+AGG - chr5_2:847634-847653 Msa0747900:CDS 65.0%
ACCCCAGCCCCATACCCGAC+AGG + chr5_2:844861-844880 None:intergenic 70.0%
TGGGCCGGGCTGAAGCGTGA+GGG + chr5_2:845286-845305 None:intergenic 70.0%
TTGGGCCGGGCTGAAGCGTG+AGG + chr5_2:845287-845306 None:intergenic 70.0%
CACGCTTCAGCCCGGCCCAA+TGG - chr5_2:845287-845306 Msa0747900:intron 70.0%
AGCCTCCGACCCATTGGGCC+GGG + chr5_2:845300-845319 None:intergenic 70.0%
CAGCCTCCGACCCATTGGGC+CGG + chr5_2:845301-845320 None:intergenic 70.0%
TGGGCCGGGCTGAAGCGTGA+GGG + chr5_2:845286-845305 None:intergenic 70.0%
TTGGGCCGGGCTGAAGCGTG+AGG + chr5_2:845287-845306 None:intergenic 70.0%
CACGCTTCAGCCCGGCCCAA+TGG - chr5_2:845287-845306 Msa0747900:intron 70.0%
AGCCCGGCCCAATGGGTCGG+AGG - chr5_2:845295-845314 Msa0747900:intron 75.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 838615 847988 838615 ID=Msa0747900;Name=Msa0747900
chr5_2 mRNA 838615 847988 838615 ID=Msa0747900-mRNA-1;Parent=Msa0747900;Name=Msa0747900-mRNA-1;_AED=0.08;_eAED=0.08;_QI=114|1|1|1|1|1|14|511|863
chr5_2 exon 838615 839200 838615 ID=Msa0747900-mRNA-1:exon:204;Parent=Msa0747900-mRNA-1
chr5_2 exon 839854 839922 839854 ID=Msa0747900-mRNA-1:exon:203;Parent=Msa0747900-mRNA-1
chr5_2 exon 840426 840533 840426 ID=Msa0747900-mRNA-1:exon:202;Parent=Msa0747900-mRNA-1
chr5_2 exon 843289 843378 843289 ID=Msa0747900-mRNA-1:exon:201;Parent=Msa0747900-mRNA-1
chr5_2 exon 843470 843541 843470 ID=Msa0747900-mRNA-1:exon:200;Parent=Msa0747900-mRNA-1
chr5_2 exon 844694 844780 844694 ID=Msa0747900-mRNA-1:exon:199;Parent=Msa0747900-mRNA-1
chr5_2 exon 844986 845057 844986 ID=Msa0747900-mRNA-1:exon:198;Parent=Msa0747900-mRNA-1
chr5_2 exon 845162 845269 845162 ID=Msa0747900-mRNA-1:exon:197;Parent=Msa0747900-mRNA-1
chr5_2 exon 845387 845686 845387 ID=Msa0747900-mRNA-1:exon:196;Parent=Msa0747900-mRNA-1
chr5_2 exon 845770 845868 845770 ID=Msa0747900-mRNA-1:exon:195;Parent=Msa0747900-mRNA-1
chr5_2 exon 845977 846097 845977 ID=Msa0747900-mRNA-1:exon:194;Parent=Msa0747900-mRNA-1
chr5_2 exon 846181 846317 846181 ID=Msa0747900-mRNA-1:exon:193;Parent=Msa0747900-mRNA-1
chr5_2 exon 846399 847397 846399 ID=Msa0747900-mRNA-1:exon:192;Parent=Msa0747900-mRNA-1
chr5_2 exon 847620 847988 847620 ID=Msa0747900-mRNA-1:exon:191;Parent=Msa0747900-mRNA-1
chr5_2 five_prime_UTR 847875 847988 847875 ID=Msa0747900-mRNA-1:five_prime_utr;Parent=Msa0747900-mRNA-1
chr5_2 CDS 847620 847874 847620 ID=Msa0747900-mRNA-1:cds;Parent=Msa0747900-mRNA-1
chr5_2 CDS 846399 847397 846399 ID=Msa0747900-mRNA-1:cds;Parent=Msa0747900-mRNA-1
chr5_2 CDS 846181 846317 846181 ID=Msa0747900-mRNA-1:cds;Parent=Msa0747900-mRNA-1
chr5_2 CDS 845977 846097 845977 ID=Msa0747900-mRNA-1:cds;Parent=Msa0747900-mRNA-1
chr5_2 CDS 845770 845868 845770 ID=Msa0747900-mRNA-1:cds;Parent=Msa0747900-mRNA-1
chr5_2 CDS 845387 845686 845387 ID=Msa0747900-mRNA-1:cds;Parent=Msa0747900-mRNA-1
chr5_2 CDS 845162 845269 845162 ID=Msa0747900-mRNA-1:cds;Parent=Msa0747900-mRNA-1
chr5_2 CDS 844986 845057 844986 ID=Msa0747900-mRNA-1:cds;Parent=Msa0747900-mRNA-1
chr5_2 CDS 844694 844780 844694 ID=Msa0747900-mRNA-1:cds;Parent=Msa0747900-mRNA-1
chr5_2 CDS 843470 843541 843470 ID=Msa0747900-mRNA-1:cds;Parent=Msa0747900-mRNA-1
chr5_2 CDS 843289 843378 843289 ID=Msa0747900-mRNA-1:cds;Parent=Msa0747900-mRNA-1
chr5_2 CDS 840426 840533 840426 ID=Msa0747900-mRNA-1:cds;Parent=Msa0747900-mRNA-1
chr5_2 CDS 839854 839922 839854 ID=Msa0747900-mRNA-1:cds;Parent=Msa0747900-mRNA-1
chr5_2 CDS 839126 839200 839126 ID=Msa0747900-mRNA-1:cds;Parent=Msa0747900-mRNA-1
chr5_2 three_prime_UTR 838615 839125 838615 ID=Msa0747900-mRNA-1:three_prime_utr;Parent=Msa0747900-mRNA-1
Gene Sequence

>Msa0747900

ATGGGGTCTCTTCCTCTCACTAGTAAAACCTCATTCCTCACTACCACAGCTCAATTTCCTTTCTTTTCATCATCAAATAATAGAAGAAGAAAAACAAGAAGAACTGTTTTTCTGAACCAGAGAAAAAACTACAAGGTTTTTGCCTCATCTTCACGCGATGAAGACAAAAATACCCCTCAACTTGATAATTACGACCTCATGGAACTCAAATTCGGTCGTTTACTTGGTGAAGACCCTAAGCTCACCCTTGCCAAGGTATTGGGAAGAAAGGCCAACCCTGATGCATCTTATCTTGATATTGAGAAATCATTTTATAAAAGAAAAAAGGGAAAAGTTGTGGAAATTGAGGAACTTCCATTTGAAGTTGAAAGACCTTGGGCAAAAAAATTACCTCCCAAACCCCAAGGATTGAAATCCAAATCTGATGATAGTGATAACAATGTTGAAATGGAGATTAAGAAACCTAATGAAGCCCTGCGGAAACCCGGAAATGTTAGAAAAAGTAATGTTCCTAATGTTATTTTGAGAAAGCCGTCTTTGTATAATGAGGACAAAGACGAGGATGAGGACGTGGACATGTCTTCGAGGTTGAGAATGAAACCAAATTTGTCTCTTAAAATGCAGAGTGGACAAGTGAAGGAGAAGTTTAGTGACATGACATTGTTGAGGAAGCCTGGATCGGTAATTGGTAAGAATGTTGAAAGTGAATTGAAGACGCGGAAAGAAGAGCCGAGTTATGAAGTTAGTAACTTGACCTTGTTGGAACAACCACACAGACCAGGTTGCAATAAAGAAGTAGAGAAGTCTGCAAAACCAAGTGATGAAGTTAGTAAATTGACCTTGTTAGAACAGCCACACCGGCCAAGTTGCAATAAAGAACTTGAGAAGTTTGCAGAGCCGAGTGATGAAGTCGAGAAGTTGACCTTGTTGGAACAGCCACACAGACCAAGTTCTAATAAAGAACTAGAAAAGTTTGCTGAGCCAAGTGATGAAGTCGCAAAATTAACCTTGTTGGAACAGCCACAAAGAGCAAGTAGCAAAGAAGAAGAGCAGTTTGGAGAGCCAAGTGATGAAGTCTCAAATTTGACCTTGTTGGAAAAGCCACAAAGTGCAAGTGACAAAGAAGAAGAAGAGCAGTTTGAAGAGCCAAGTGATGAAGTCGCAAACTTGACATTGTTGCAACAGCCACAAAGAGCAGGCGACAAAGTAGAAGAAGAGAAGTTTGGAGATGTGAGAGTCGTGGTCCCAATTGATGGATCAGAGCAACAGAAGCAGAAACAATCAGAGGTCCATCAGGAACTATTTGATTTAAATCAACCGTCTGATTTAAATTCAGTTGGTTCTAAGACTGAGTTGTCCGTAGAAGCTGCAATACAAGGAAAGCCAAAAAGATTAGATCCATATGAGAAACAAACCTCAAAAGCAGTTGGAGAAGAGACCGCTTCCCTTGATCCTGGAAGTCGTCGAAACAGTGATGAATCAGGAAATCTTGTTGATGTGTTAGATATTCAGGAAGGCGAAGATGCTGATTGGACCAAGGCAGAAGATTTGATTAAGACTGGAGATAGAGTTGATGTGGACGTAGTAAGCTGCAATGCCAAGGGTTTTGTTGTTTCTTTTGGTACCTTGGTAGGATTTCTGCCATACCGAAATCTTCTGTCAAAGTGGAAATTTTTAGCTTTTGAGTCATGGTTAAGACAGAAGGGCTTGGATCCATCAATGTACAAGCAAAACTTGGTCACTGTGACAAATTATGATGCTGAAAATAGTAATTTTTCTGCTGATTCACCTTCACATATGGAGAATGATGGTAAACTTGAAGATAAAATTTCACCAGATATGAAATTGGAAGATCTGTTAAAGATTTATGACCAAGAGAAAATCAAGTTCTTATCATCATTTATTGGACAGCAAATCAAAGCATACGTGTTACTATCAGACAGGAAATTGAAAAAGCTCATATTTTCACTAAGACCAAAAGAGAAGGAAGAACTAACTGAAAAGAAGAGAAATCTCATGGCTAGACTTCAAGTTGGTGATATTGTGAAATGCCGCATCCAAAAGATAACTTACTTTGGAATTTTTGTTGAGGTTGAAGGAGTTTCTGCACTAATTCATCAATCAGAAATATCGTGGGATTCCACGTTGGACCCATCTAATTATTTTAAGATTGATCAGGTTGTAGAGGCAAAAGTTCACCAGATAAACTCTGCTCTTGGGCGCATATTTTTATCATTAAAGGAGGTCACGTGTGATCCATTGATGAACTCCTTAGAGTCTGTAGTTGGAGACCATGAACCCTTTGATGGGAGATTGGAAGCAGCTCAAACAGATGTAGAGTGGTCTGAAGTCGAATCTCTTATAAAAGAATTGCAAAAAATTGAGGGCATCCAGTCAGTTTCAAAAGGCCGTTTTTTCAGGAGCCCTGGTTTAGCTCCCACATTTCAGGTTTATATGGCATCCATATTTGAGAATCAGTACAAGTTGCTTGCCCGATCAGAAAACAAAATACAAGAGGTGATGGTTCAAACGTCTTTGGATAAAGAAATGATGAAATCAATTATTATGACATGTGCAAATAGAGTAGAATAG
Protein sequence

>Msa0747900

MGSLPLTSKTSFLTTTAQFPFFSSSNNRRRKTRRTVFLNQRKNYKVFASSSRDEDKNTPQLDNYDLMELKFGRLLGEDPKLTLAKVLGRKANPDASYLDIEKSFYKRKKGKVVEIEELPFEVERPWAKKLPPKPQGLKSKSDDSDNNVEMEIKKPNEALRKPGNVRKSNVPNVILRKPSLYNEDKDEDEDVDMSSRLRMKPNLSLKMQSGQVKEKFSDMTLLRKPGSVIGKNVESELKTRKEEPSYEVSNLTLLEQPHRPGCNKEVEKSAKPSDEVSKLTLLEQPHRPSCNKELEKFAEPSDEVEKLTLLEQPHRPSSNKELEKFAEPSDEVAKLTLLEQPQRASSKEEEQFGEPSDEVSNLTLLEKPQSASDKEEEEQFEEPSDEVANLTLLQQPQRAGDKVEEEKFGDVRVVVPIDGSEQQKQKQSEVHQELFDLNQPSDLNSVGSKTELSVEAAIQGKPKRLDPYEKQTSKAVGEETASLDPGSRRNSDESGNLVDVLDIQEGEDADWTKAEDLIKTGDRVDVDVVSCNAKGFVVSFGTLVGFLPYRNLLSKWKFLAFESWLRQKGLDPSMYKQNLVTVTNYDAENSNFSADSPSHMENDGKLEDKISPDMKLEDLLKIYDQEKIKFLSSFIGQQIKAYVLLSDRKLKKLIFSLRPKEKEELTEKKRNLMARLQVGDIVKCRIQKITYFGIFVEVEGVSALIHQSEISWDSTLDPSNYFKIDQVVEAKVHQINSALGRIFLSLKEVTCDPLMNSLESVVGDHEPFDGRLEAAQTDVEWSEVESLIKELQKIEGIQSVSKGRFFRSPGLAPTFQVYMASIFENQYKLLARSENKIQEVMVQTSLDKEMMKSIIMTCANRVE*