Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0857940 | XP_003616538.1 | 98.104 | 422 | 8 | 0 | 34 | 455 | 1 | 422 | 0.0 | 858 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0857940 | G7KBU0 | 98.104 | 422 | 8 | 0 | 34 | 455 | 1 | 422 | 0.0 | 858 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010110 | Msa0857940 | 0.803898 | 2.798004e-49 | -8.615850e-47 |
| Msa0023330 | Msa0857940 | 0.821857 | 3.230633e-53 | -8.615850e-47 |
| Msa0030160 | Msa0857940 | 0.808391 | 3.170101e-50 | -8.615850e-47 |
| Msa0032080 | Msa0857940 | 0.819383 | 1.195405e-52 | -8.615850e-47 |
| Msa0032470 | Msa0857940 | 0.818036 | 2.417471e-52 | -8.615850e-47 |
| Msa0047110 | Msa0857940 | 0.811070 | 8.414665e-51 | -8.615850e-47 |
| Msa0054820 | Msa0857940 | 0.801024 | 1.094234e-48 | -8.615850e-47 |
| Msa0054920 | Msa0857940 | 0.817060 | 4.009783e-52 | -8.615850e-47 |
| Msa0058600 | Msa0857940 | 0.815677 | 8.179954e-52 | -8.615850e-47 |
| Msa0075470 | Msa0857940 | 0.800026 | 1.748168e-48 | -8.615850e-47 |
| Msa0079130 | Msa0857940 | 0.808389 | 3.172607e-50 | -8.615850e-47 |
| Msa0092410 | Msa0857940 | 0.829635 | 4.611260e-55 | -8.615850e-47 |
| Msa0101860 | Msa0857940 | 0.810378 | 1.187761e-50 | -8.615850e-47 |
| Msa0104230 | Msa0857940 | 0.809321 | 2.004853e-50 | -8.615850e-47 |
| Msa0104670 | Msa0857940 | 0.814000 | 1.925100e-51 | -8.615850e-47 |
| Msa0106620 | Msa0857940 | 0.809197 | 2.131158e-50 | -8.615850e-47 |
| Msa0106710 | Msa0857940 | 0.807222 | 5.616330e-50 | -8.615850e-47 |
| Msa0117520 | Msa0857940 | 0.822836 | 1.914417e-53 | -8.615850e-47 |
| Msa0119090 | Msa0857940 | 0.801371 | 9.290936e-49 | -8.615850e-47 |
| Msa0613110 | Msa0857940 | 0.817613 | 3.012060e-52 | -8.615850e-47 |
| Msa0613340 | Msa0857940 | 0.804266 | 2.346126e-49 | -8.615850e-47 |
| Msa0620620 | Msa0857940 | 0.802769 | 4.793099e-49 | -8.615850e-47 |
| Msa0623990 | Msa0857940 | 0.806146 | 9.476860e-50 | -8.615850e-47 |
| Msa0624060 | Msa0857940 | 0.831188 | 1.923327e-55 | -8.615850e-47 |
| Msa0641130 | Msa0857940 | 0.812256 | 4.646592e-51 | -8.615850e-47 |
| Msa0642730 | Msa0857940 | 0.812051 | 5.149326e-51 | -8.615850e-47 |
| Msa0667740 | Msa0857940 | 0.804355 | 2.248285e-49 | -8.615850e-47 |
| Msa0667770 | Msa0857940 | 0.807915 | 4.002076e-50 | -8.615850e-47 |
| Msa0673120 | Msa0857940 | 0.805712 | 1.169497e-49 | -8.615850e-47 |
| Msa0676130 | Msa0857940 | 0.821854 | 3.234985e-53 | -8.615850e-47 |
| Msa0676180 | Msa0857940 | 0.824689 | 7.043203e-54 | -8.615850e-47 |
| Msa0685090 | Msa0857940 | 0.807048 | 6.114368e-50 | -8.615850e-47 |
| Msa0689250 | Msa0857940 | 0.819428 | 1.167217e-52 | -8.615850e-47 |
| Msa0705990 | Msa0857940 | 0.805746 | 1.150297e-49 | -8.615850e-47 |
| Msa0708310 | Msa0857940 | 0.828113 | 1.077048e-54 | -8.615850e-47 |
| Msa0711150 | Msa0857940 | 0.859376 | 4.317949e-63 | -8.615850e-47 |
| Msa0713380 | Msa0857940 | 0.811949 | 5.419824e-51 | -8.615850e-47 |
| Msa0714760 | Msa0857940 | 0.809033 | 2.310907e-50 | -8.615850e-47 |
| Msa0717890 | Msa0857940 | 0.805891 | 1.072322e-49 | -8.615850e-47 |
| Msa0720360 | Msa0857940 | 0.809200 | 2.128680e-50 | -8.615850e-47 |
| Msa0724170 | Msa0857940 | 0.811224 | 7.791325e-51 | -8.615850e-47 |
| Msa0733010 | Msa0857940 | 0.876948 | 9.297358e-69 | -8.615850e-47 |
| Msa0738030 | Msa0857940 | 0.918072 | 2.445645e-86 | -8.615850e-47 |
| Msa0741070 | Msa0857940 | 0.842594 | 2.351389e-58 | -8.615850e-47 |
| Msa0741440 | Msa0857940 | 0.812530 | 4.048285e-51 | -8.615850e-47 |
| Msa0743930 | Msa0857940 | 0.851683 | 7.564361e-61 | -8.615850e-47 |
| Msa0749440 | Msa0857940 | 0.807024 | 6.186271e-50 | -8.615850e-47 |
| Msa0750810 | Msa0857940 | 0.820113 | 8.142711e-53 | -8.615850e-47 |
| Msa0750850 | Msa0857940 | 0.818449 | 1.949394e-52 | -8.615850e-47 |
| Msa0751850 | Msa0857940 | 0.812801 | 3.530762e-51 | -8.615850e-47 |
| Msa0756380 | Msa0857940 | 0.830140 | 3.473290e-55 | -8.615850e-47 |
| Msa0763890 | Msa0857940 | 0.803986 | 2.683372e-49 | -8.615850e-47 |
| Msa0763920 | Msa0857940 | 0.815089 | 1.104973e-51 | -8.615850e-47 |
| Msa0766760 | Msa0857940 | 0.802209 | 6.253955e-49 | -8.615850e-47 |
| Msa0773990 | Msa0857940 | 0.817974 | 2.496581e-52 | -8.615850e-47 |
| Msa0779510 | Msa0857940 | 0.822647 | 2.118055e-53 | -8.615850e-47 |
| Msa0784480 | Msa0857940 | 0.820098 | 8.207778e-53 | -8.615850e-47 |
| Msa0785220 | Msa0857940 | 0.804340 | 2.264606e-49 | -8.615850e-47 |
| Msa0795340 | Msa0857940 | 0.819795 | 9.628548e-53 | -8.615850e-47 |
| Msa0797770 | Msa0857940 | 0.828684 | 7.841882e-55 | -8.615850e-47 |
| Msa0805960 | Msa0857940 | 0.814125 | 1.806781e-51 | -8.615850e-47 |
| Msa0816130 | Msa0857940 | 0.839078 | 1.964795e-57 | -8.615850e-47 |
| Msa0817460 | Msa0857940 | 0.830620 | 2.650331e-55 | -8.615850e-47 |
| Msa0818060 | Msa0857940 | 0.818784 | 1.635873e-52 | -8.615850e-47 |
| Msa0822500 | Msa0857940 | 0.835193 | 1.934421e-56 | -8.615850e-47 |
| Msa0823540 | Msa0857940 | 0.828094 | 1.087891e-54 | -8.615850e-47 |
| Msa0828240 | Msa0857940 | 0.808676 | 2.755626e-50 | -8.615850e-47 |
| Msa0830230 | Msa0857940 | 0.848571 | 5.631924e-60 | -8.615850e-47 |
| Msa0831850 | Msa0857940 | 0.816969 | 4.205136e-52 | -8.615850e-47 |
| Msa0833530 | Msa0857940 | 0.800177 | 1.628867e-48 | -8.615850e-47 |
| Msa0835230 | Msa0857940 | 0.831049 | 2.080527e-55 | -8.615850e-47 |
| Msa0124320 | Msa0857940 | 0.812757 | 3.610317e-51 | -8.615850e-47 |
| Msa0125650 | Msa0857940 | 0.806244 | 9.036636e-50 | -8.615850e-47 |
| Msa0126790 | Msa0857940 | 0.812510 | 4.089666e-51 | -8.615850e-47 |
| Msa0138020 | Msa0857940 | 0.842129 | 3.122406e-58 | -8.615850e-47 |
| Msa0140500 | Msa0857940 | -0.808662 | 2.774521e-50 | -8.615850e-47 |
| Msa0144530 | Msa0857940 | 0.844753 | 6.218188e-59 | -8.615850e-47 |
| Msa0148080 | Msa0857940 | 0.821180 | 4.630538e-53 | -8.615850e-47 |
| Msa0160960 | Msa0857940 | 0.850328 | 1.822838e-60 | -8.615850e-47 |
| Msa0171870 | Msa0857940 | 0.821511 | 3.884117e-53 | -8.615850e-47 |
| Msa0183760 | Msa0857940 | 0.809543 | 1.796317e-50 | -8.615850e-47 |
| Msa0189040 | Msa0857940 | 0.804284 | 2.326321e-49 | -8.615850e-47 |
| Msa0194440 | Msa0857940 | 0.800028 | 1.746559e-48 | -8.615850e-47 |
| Msa0204960 | Msa0857940 | 0.801544 | 8.562699e-49 | -8.615850e-47 |
| Msa0207040 | Msa0857940 | -0.800813 | 1.208770e-48 | -8.615850e-47 |
| Msa0217700 | Msa0857940 | 0.862407 | 5.178659e-64 | -8.615850e-47 |
| Msa0218370 | Msa0857940 | 0.844759 | 6.194683e-59 | -8.615850e-47 |
| Msa0218460 | Msa0857940 | 0.805093 | 1.576516e-49 | -8.615850e-47 |
| Msa0219590 | Msa0857940 | 0.805089 | 1.579404e-49 | -8.615850e-47 |
| Msa0225110 | Msa0857940 | 0.800860 | 1.182086e-48 | -8.615850e-47 |
| Msa0225220 | Msa0857940 | 0.835152 | 1.981828e-56 | -8.615850e-47 |
| Msa0231060 | Msa0857940 | 0.820929 | 5.289923e-53 | -8.615850e-47 |
| Msa0232020 | Msa0857940 | 0.812076 | 5.084455e-51 | -8.615850e-47 |
| Msa0233370 | Msa0857940 | 0.806125 | 9.575986e-50 | -8.615850e-47 |
| Msa0234090 | Msa0857940 | 0.812363 | 4.402402e-51 | -8.615850e-47 |
| Msa0236420 | Msa0857940 | 0.811209 | 7.850516e-51 | -8.615850e-47 |
| Msa0369920 | Msa0857940 | 0.800083 | 1.701723e-48 | -8.615850e-47 |
| Msa0371950 | Msa0857940 | 0.817542 | 3.124669e-52 | -8.615850e-47 |
| Msa0380930 | Msa0857940 | 0.808631 | 2.816193e-50 | -8.615850e-47 |
| Msa0381610 | Msa0857940 | -0.806361 | 8.539701e-50 | -8.615850e-47 |
| Msa0382370 | Msa0857940 | 0.803790 | 2.946799e-49 | -8.615850e-47 |
| Msa0391400 | Msa0857940 | 0.804343 | 2.260718e-49 | -8.615850e-47 |
| Msa0395980 | Msa0857940 | 0.809077 | 2.261090e-50 | -8.615850e-47 |
| Msa0408300 | Msa0857940 | 0.802804 | 4.715439e-49 | -8.615850e-47 |
| Msa0411390 | Msa0857940 | 0.804036 | 2.619731e-49 | -8.615850e-47 |
| Msa0414140 | Msa0857940 | 0.809552 | 1.788454e-50 | -8.615850e-47 |
| Msa0417330 | Msa0857940 | 0.820007 | 8.610908e-53 | -8.615850e-47 |
| Msa0425170 | Msa0857940 | 0.806365 | 8.520524e-50 | -8.615850e-47 |
| Msa0432160 | Msa0857940 | 0.827667 | 1.378412e-54 | -8.615850e-47 |
| Msa0450400 | Msa0857940 | -0.819051 | 1.422781e-52 | -8.615850e-47 |
| Msa0455760 | Msa0857940 | 0.835318 | 1.798822e-56 | -8.615850e-47 |
| Msa0463270 | Msa0857940 | 0.833048 | 6.670939e-56 | -8.615850e-47 |
| Msa0464100 | Msa0857940 | 0.800789 | 1.222044e-48 | -8.615850e-47 |
| Msa0468320 | Msa0857940 | 0.800864 | 1.179982e-48 | -8.615850e-47 |
| Msa0470880 | Msa0857940 | 0.826983 | 2.010822e-54 | -8.615850e-47 |
| Msa0476680 | Msa0857940 | 0.834787 | 2.449216e-56 | -8.615850e-47 |
| Msa0240900 | Msa0857940 | 0.813618 | 2.336267e-51 | -8.615850e-47 |
| Msa0241140 | Msa0857940 | 0.873722 | 1.179681e-67 | -8.615850e-47 |
| Msa0264830 | Msa0857940 | 0.817047 | 4.038251e-52 | -8.615850e-47 |
| Msa0269560 | Msa0857940 | 0.848708 | 5.159159e-60 | -8.615850e-47 |
| Msa0270960 | Msa0857940 | 0.803780 | 2.961068e-49 | -8.615850e-47 |
| Msa0271550 | Msa0857940 | 0.835635 | 1.495707e-56 | -8.615850e-47 |
| Msa0274980 | Msa0857940 | 0.810072 | 1.382204e-50 | -8.615850e-47 |
| Msa0278580 | Msa0857940 | 0.858060 | 1.067343e-62 | -8.615850e-47 |
| Msa0287870 | Msa0857940 | 0.818086 | 2.354731e-52 | -8.615850e-47 |
| Msa0296820 | Msa0857940 | 0.812768 | 3.589692e-51 | -8.615850e-47 |
| Msa0296870 | Msa0857940 | 0.814379 | 1.587398e-51 | -8.615850e-47 |
| Msa0302870 | Msa0857940 | 0.810647 | 1.038778e-50 | -8.615850e-47 |
| Msa0307310 | Msa0857940 | 0.840344 | 9.198676e-58 | -8.615850e-47 |
| Msa0315690 | Msa0857940 | 0.817787 | 2.751391e-52 | -8.615850e-47 |
| Msa0317960 | Msa0857940 | 0.841202 | 5.481903e-58 | -8.615850e-47 |
| Msa0317970 | Msa0857940 | 0.825159 | 5.456413e-54 | -8.615850e-47 |
| Msa0319290 | Msa0857940 | 0.806246 | 9.029354e-50 | -8.615850e-47 |
| Msa0321690 | Msa0857940 | 0.800159 | 1.642410e-48 | -8.615850e-47 |
| Msa0339910 | Msa0857940 | 0.800740 | 1.250657e-48 | -8.615850e-47 |
| Msa0340340 | Msa0857940 | 0.816140 | 6.446808e-52 | -8.615850e-47 |
| Msa0342010 | Msa0857940 | 0.832201 | 1.082284e-55 | -8.615850e-47 |
| Msa0363790 | Msa0857940 | 0.829265 | 5.671763e-55 | -8.615850e-47 |
| Msa0506860 | Msa0857940 | 0.809537 | 1.801921e-50 | -8.615850e-47 |
| Msa0518170 | Msa0857940 | 0.804114 | 2.522856e-49 | -8.615850e-47 |
| Msa0521010 | Msa0857940 | 0.837395 | 5.332767e-57 | -8.615850e-47 |
| Msa0532960 | Msa0857940 | 0.806718 | 7.180057e-50 | -8.615850e-47 |
| Msa0534150 | Msa0857940 | 0.836057 | 1.169536e-56 | -8.615850e-47 |
| Msa0545050 | Msa0857940 | 0.816705 | 4.817437e-52 | -8.615850e-47 |
| Msa0545850 | Msa0857940 | 0.803468 | 3.436273e-49 | -8.615850e-47 |
| Msa0559500 | Msa0857940 | 0.809666 | 1.690488e-50 | -8.615850e-47 |
| Msa0562570 | Msa0857940 | 0.803190 | 3.923246e-49 | -8.615850e-47 |
| Msa0566350 | Msa0857940 | 0.820405 | 6.980986e-53 | -8.615850e-47 |
| Msa0566750 | Msa0857940 | 0.827096 | 1.888942e-54 | -8.615850e-47 |
| Msa0574600 | Msa0857940 | 0.816452 | 5.489349e-52 | -8.615850e-47 |
| Msa0581400 | Msa0857940 | 0.819965 | 8.802035e-53 | -8.615850e-47 |
| Msa0583360 | Msa0857940 | -0.823816 | 1.130113e-53 | -8.615850e-47 |
| Msa0590150 | Msa0857940 | 0.800268 | 1.561086e-48 | -8.615850e-47 |
| Msa0594050 | Msa0857940 | 0.828864 | 7.091483e-55 | -8.615850e-47 |
| Msa0600590 | Msa0857940 | 0.804597 | 2.001172e-49 | -8.615850e-47 |
| Msa0844110 | Msa0857940 | 0.823448 | 1.377646e-53 | -8.615850e-47 |
| Msa0846860 | Msa0857940 | 0.847689 | 9.863049e-60 | -8.615850e-47 |
| Msa0857940 | Msa0862620 | 0.808442 | 3.090957e-50 | -8.615850e-47 |
| Msa0857940 | Msa0865030 | 0.800446 | 1.435921e-48 | -8.615850e-47 |
| Msa0857940 | Msa0867010 | 0.816337 | 5.825076e-52 | -8.615850e-47 |
| Msa0857940 | Msa0878220 | 0.836161 | 1.100572e-56 | -8.615850e-47 |
| Msa0857940 | Msa0894710 | 0.836477 | 9.147908e-57 | -8.615850e-47 |
| Msa0857940 | Msa0899970 | 0.822470 | 2.328308e-53 | -8.615850e-47 |
| Msa0857940 | Msa0902830 | 0.809907 | 1.500352e-50 | -8.615850e-47 |
| Msa0857940 | Msa0921420 | 0.819103 | 1.384317e-52 | -8.615850e-47 |
| Msa0857940 | Msa0928130 | 0.801151 | 1.030861e-48 | -8.615850e-47 |
| Msa0857940 | Msa0936390 | 0.847949 | 8.364155e-60 | -8.615850e-47 |
| Msa0857940 | Msa0943970 | 0.849991 | 2.265264e-60 | -8.615850e-47 |
| Msa0857940 | Msa0944020 | 0.830585 | 2.702629e-55 | -8.615850e-47 |
| Msa0857940 | Msa0960390 | 0.827790 | 1.287696e-54 | -8.615850e-47 |
| Msa0857940 | Msa0964310 | 0.802885 | 4.537781e-49 | -8.615850e-47 |
| Msa0857940 | Msa0965080 | 0.821251 | 4.459929e-53 | -8.615850e-47 |
| Msa0857940 | Msa0965290 | 0.833247 | 5.949248e-56 | -8.615850e-47 |
| Msa0857940 | Msa0972960 | 0.800178 | 1.627784e-48 | -8.615850e-47 |
| Msa0857940 | Msa0975320 | 0.814944 | 1.190231e-51 | -8.615850e-47 |
| Msa0857940 | Msa0986510 | 0.838187 | 3.336972e-57 | -8.615850e-47 |
| Msa0857940 | Msa0992580 | 0.800986 | 1.113917e-48 | -8.615850e-47 |
| Msa0857940 | Msa0992640 | 0.813039 | 3.131652e-51 | -8.615850e-47 |
| Msa0857940 | Msa0992680 | 0.803379 | 3.585153e-49 | -8.615850e-47 |
| Msa0857940 | Msa0994910 | 0.804428 | 2.170970e-49 | -8.615850e-47 |
| Msa0857940 | Msa0999680 | 0.830588 | 2.699348e-55 | -8.615850e-47 |
| Msa0857940 | Msa1011090 | 0.803545 | 3.312749e-49 | -8.615850e-47 |
| Msa0857940 | Msa1024680 | 0.804139 | 2.493258e-49 | -8.615850e-47 |
| Msa0857940 | Msa1026480 | 0.801514 | 8.686068e-49 | -8.615850e-47 |
| Msa0857940 | Msa1034200 | 0.812401 | 4.319356e-51 | -8.615850e-47 |
| Msa0857940 | Msa1034500 | 0.826726 | 2.315549e-54 | -8.615850e-47 |
| Msa0857940 | Msa1048220 | 0.814702 | 1.346857e-51 | -8.615850e-47 |
| Msa0857940 | Msa1063360 | 0.806586 | 7.656854e-50 | -8.615850e-47 |
| Msa0857940 | Msa1063400 | 0.818513 | 1.884704e-52 | -8.615850e-47 |
| Msa0857940 | Msa1063420 | 0.808396 | 3.161478e-50 | -8.615850e-47 |
| Msa0857940 | Msa1075650 | 0.803522 | 3.348897e-49 | -8.615850e-47 |
| Msa0857940 | Msa1089450 | 0.810113 | 1.354770e-50 | -8.615850e-47 |
| Msa0857940 | Msa1089460 | 0.860391 | 2.134869e-63 | -8.615850e-47 |
| Msa0857940 | Msa1096070 | 0.800702 | 1.273117e-48 | -8.615850e-47 |
| Msa0857940 | Msa1101090 | 0.800513 | 1.391531e-48 | -8.615850e-47 |
| Msa0857940 | Msa1104560 | 0.828999 | 6.576843e-55 | -8.615850e-47 |
| Msa0857940 | Msa1108710 | 0.814855 | 1.245589e-51 | -8.615850e-47 |
| Msa0857940 | Msa1111380 | 0.801393 | 9.197348e-49 | -8.615850e-47 |
| Msa0857940 | Msa1122150 | 0.839328 | 1.692311e-57 | -8.615850e-47 |
| Msa0857940 | Msa1144040 | 0.803589 | 3.243561e-49 | -8.615850e-47 |
| Msa0857940 | Msa1145810 | 0.802891 | 4.524602e-49 | -8.615850e-47 |
| Msa0857940 | Msa1155170 | -0.817308 | 3.527078e-52 | -8.615850e-47 |
| Msa0857940 | Msa1160560 | 0.828141 | 1.060396e-54 | -8.615850e-47 |
| Msa0857940 | Msa1179630 | 0.809557 | 1.784019e-50 | -8.615850e-47 |
| Msa0857940 | Msa1180500 | 0.805771 | 1.136407e-49 | -8.615850e-47 |
| Msa0857940 | Msa1184690 | 0.814746 | 1.316815e-51 | -8.615850e-47 |
| Msa0857940 | Msa1188180 | 0.826969 | 2.026408e-54 | -8.615850e-47 |
| Msa0857940 | Msa1212050 | 0.816200 | 6.250083e-52 | -8.615850e-47 |
| Msa0857940 | Msa1212130 | 0.810911 | 9.106268e-51 | -8.615850e-47 |
| Msa0857940 | Msa1213890 | 0.820486 | 6.686044e-53 | -8.615850e-47 |
| Msa0857940 | Msa1221330 | 0.817144 | 3.840309e-52 | -8.615850e-47 |
| Msa0857940 | Msa1225860 | -0.827077 | 1.908759e-54 | -8.615850e-47 |
| Msa0857940 | Msa1231840 | 0.813219 | 2.859082e-51 | -8.615850e-47 |
| Msa0857940 | Msa1232700 | 0.840375 | 9.032408e-58 | -8.615850e-47 |
| Msa0857940 | Msa1236110 | -0.800892 | 1.164667e-48 | -8.615850e-47 |
| Msa0857940 | Msa1236440 | 0.818171 | 2.253228e-52 | -8.615850e-47 |
| Msa0857940 | Msa1237700 | 0.804485 | 2.112408e-49 | -8.615850e-47 |
| Msa0857940 | Msa1242300 | 0.811054 | 8.480617e-51 | -8.615850e-47 |
| Msa0857940 | Msa1243870 | 0.816274 | 6.016515e-52 | -8.615850e-47 |
| Msa0857940 | Msa1259860 | 0.815804 | 7.660626e-52 | -8.615850e-47 |
| Msa0857940 | Msa1271130 | 0.823972 | 1.038504e-53 | -8.615850e-47 |
| Msa0857940 | Msa1272010 | 0.814716 | 1.337048e-51 | -8.615850e-47 |
| Msa0857940 | Msa1277670 | 0.815732 | 7.950030e-52 | -8.615850e-47 |
| Msa0857940 | Msa1283740 | 0.844696 | 6.442193e-59 | -8.615850e-47 |
| Msa0857940 | Msa1291450 | 0.821417 | 4.081807e-53 | -8.615850e-47 |
| Msa0857940 | Msa1307560 | 0.832326 | 1.007861e-55 | -8.615850e-47 |
| Msa0857940 | Msa1312520 | 0.806743 | 7.090893e-50 | -8.615850e-47 |
| Msa0857940 | Msa1319560 | 0.810316 | 1.224437e-50 | -8.615850e-47 |
| Msa0857940 | Msa1325410 | -0.826869 | 2.140782e-54 | -8.615850e-47 |
| Msa0857940 | Msa1331760 | 0.812503 | 4.103459e-51 | -8.615850e-47 |
| Msa0857940 | Msa1340200 | 0.808073 | 3.703730e-50 | -8.615850e-47 |
| Msa0857940 | Msa1342380 | 0.802800 | 4.723602e-49 | -8.615850e-47 |
| Msa0857940 | Msa1345810 | 0.810433 | 1.155669e-50 | -8.615850e-47 |
| Msa0857940 | Msa1346840 | 0.837532 | 4.916774e-57 | -8.615850e-47 |
| Msa0857940 | Msa1352280 | -0.813064 | 3.092486e-51 | -8.615850e-47 |
| Msa0857940 | Msa1353890 | 0.814398 | 1.572301e-51 | -8.615850e-47 |
| Msa0857940 | Msa1355180 | 0.827161 | 1.823072e-54 | -8.615850e-47 |
| Msa0857940 | Msa1355890 | 0.823263 | 1.521496e-53 | -8.615850e-47 |
| Msa0857940 | Msa1358500 | 0.816112 | 6.539608e-52 | -8.615850e-47 |
| Msa0857940 | Msa1359400 | 0.814896 | 1.220015e-51 | -8.615850e-47 |
| Msa0857940 | Msa1360020 | 0.804383 | 2.217623e-49 | -8.615850e-47 |
| Msa0857940 | Msa1368360 | 0.820248 | 7.582367e-53 | -8.615850e-47 |
| Msa0857940 | Msa1368430 | 0.804681 | 1.921787e-49 | -8.615850e-47 |
| Msa0857940 | Msa1369920 | -0.823581 | 1.282697e-53 | -8.615850e-47 |
| Msa0857940 | Msa1371940 | 0.803253 | 3.807404e-49 | -8.615850e-47 |
| Msa0857940 | Msa1378410 | 0.830602 | 2.677737e-55 | -8.615850e-47 |
| Msa0857940 | Msa1380220 | 0.845205 | 4.696967e-59 | -8.615850e-47 |
| Msa0857940 | Msa1382790 | 0.822980 | 1.772195e-53 | -8.615850e-47 |
| Msa0857940 | Msa1384750 | 0.803329 | 3.672315e-49 | -8.615850e-47 |
| Msa0857940 | Msa1386890 | 0.812646 | 3.817614e-51 | -8.615850e-47 |
| Msa0857940 | Msa1392210 | 0.806672 | 7.343511e-50 | -8.615850e-47 |
| Msa0857940 | Msa1394380 | 0.808350 | 3.233816e-50 | -8.615850e-47 |
| Msa0857940 | Msa1401460 | 0.802902 | 4.500205e-49 | -8.615850e-47 |
| Msa0857940 | Msa1401990 | 0.802553 | 5.310907e-49 | -8.615850e-47 |
| Msa0857940 | Msa1407190 | 0.806000 | 1.017269e-49 | -8.615850e-47 |
| Msa0857940 | Msa1412130 | 0.817579 | 3.064206e-52 | -8.615850e-47 |
| Msa0857940 | Msa1419690 | 0.807174 | 5.749326e-50 | -8.615850e-47 |
| Msa0857940 | Msa1419840 | 0.805652 | 1.203539e-49 | -8.615850e-47 |
| Msa0857940 | Msa1425260 | 0.823380 | 1.429046e-53 | -8.615850e-47 |
| Msa0857940 | Msa1428780 | 0.808747 | 2.660223e-50 | -8.615850e-47 |
| Msa0857940 | Msa1430550 | 0.842256 | 2.888855e-58 | -8.615850e-47 |
| Msa0857940 | Msa1432130 | 0.808499 | 3.005900e-50 | -8.615850e-47 |
| Msa0857940 | Msa1437730 | 0.813337 | 2.693567e-51 | -8.615850e-47 |
| Msa0857940 | Msa1442920 | 0.821460 | 3.989857e-53 | -8.615850e-47 |
| Msa0857940 | Msa1445390 | -0.807236 | 5.578402e-50 | -8.615850e-47 |
| Msa0857940 | Msa1448560 | 0.830995 | 2.145373e-55 | -8.615850e-47 |
| Msa0857940 | Msa1449340 | -0.800970 | 1.122554e-48 | -8.615850e-47 |
| Msa0857940 | Msa1450440 | 0.819059 | 1.417075e-52 | -8.615850e-47 |
| Msa0857940 | Msa1452710 | 0.848242 | 6.943107e-60 | -8.615850e-47 |
| Msa0857940 | Msa1454890 | 0.839559 | 1.473859e-57 | -8.615850e-47 |
| Msa0857940 | Msa1458680 | 0.817856 | 2.653830e-52 | -8.615850e-47 |
| Msa0857940 | Msa1462360 | 0.821534 | 3.837442e-53 | -8.615850e-47 |
| Msa0857940 | Msa1463900 | 0.822120 | 2.808266e-53 | -8.615850e-47 |
| Msa0857940 | Msa1465210 | 0.803149 | 4.001921e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0857940 | MtrunA17_Chr5g0436191 | 98.104 | 422 | 8 | 0 | 34 | 455 | 1 | 422 | 0.0 | 858 |
| Msa0857940 | MtrunA17_Chr3g0112781 | 71.724 | 435 | 103 | 6 | 34 | 449 | 1 | 434 | 0.0 | 627 |
| Msa0857940 | MtrunA17_Chr3g0141481 | 52.417 | 393 | 163 | 10 | 27 | 410 | 1 | 378 | 9.71e-137 | 398 |
| Msa0857940 | MtrunA17_Chr1g0154851 | 52.865 | 384 | 161 | 9 | 34 | 411 | 1 | 370 | 2.19e-136 | 397 |
| Msa0857940 | MtrunA17_Chr5g0403841 | 50.521 | 384 | 165 | 7 | 32 | 406 | 8 | 375 | 3.90e-132 | 386 |
| Msa0857940 | MtrunA17_Chr1g0207581 | 43.627 | 408 | 210 | 7 | 47 | 452 | 74 | 463 | 3.81e-112 | 338 |
| Msa0857940 | MtrunA17_Chr1g0152841 | 47.950 | 317 | 157 | 2 | 91 | 407 | 113 | 421 | 5.06e-107 | 325 |
| Msa0857940 | MtrunA17_Chr3g0134521 | 46.906 | 307 | 155 | 2 | 101 | 407 | 93 | 391 | 3.62e-102 | 311 |
| Msa0857940 | MtrunA17_Chr2g0309941 | 41.711 | 374 | 194 | 6 | 47 | 406 | 17 | 380 | 8.26e-98 | 298 |
| Msa0857940 | MtrunA17_Chr1g0176101 | 41.562 | 320 | 167 | 5 | 91 | 409 | 50 | 350 | 1.73e-82 | 258 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0857940 | AT5G05840.1 | 61.827 | 427 | 143 | 6 | 34 | 441 | 1 | 426 | 0.0 | 516 |
| Msa0857940 | AT3G55720.1 | 53.472 | 432 | 177 | 10 | 34 | 442 | 1 | 431 | 1.64e-146 | 425 |
| Msa0857940 | AT1G75160.1 | 52.250 | 400 | 159 | 9 | 34 | 409 | 3 | 394 | 2.70e-132 | 387 |
| Msa0857940 | AT5G66740.1 | 50.263 | 380 | 170 | 6 | 34 | 407 | 1 | 367 | 1.61e-130 | 382 |
| Msa0857940 | AT3G19540.1 | 49.684 | 316 | 150 | 2 | 92 | 407 | 129 | 435 | 2.50e-107 | 327 |
| Msa0857940 | AT1G49840.1 | 41.063 | 414 | 223 | 6 | 39 | 442 | 78 | 480 | 1.30e-106 | 325 |
| Msa0857940 | AT1G27690.1 | 43.947 | 380 | 196 | 6 | 39 | 409 | 41 | 412 | 2.02e-105 | 320 |
| Msa0857940 | AT1G79420.1 | 38.718 | 390 | 207 | 10 | 46 | 409 | 19 | 402 | 4.97e-91 | 283 |
| Msa0857940 | AT5G06610.1 | 37.466 | 371 | 203 | 9 | 47 | 409 | 4 | 353 | 4.29e-78 | 248 |
Find 104 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTTAGAGTTGGTGGTTTC+TGG | 0.051533 | 5_4:-54916825 | Msa0857940:CDS |
| CTGAAACTGAATTCATATTT+TGG | 0.078513 | 5_4:-54915162 | Msa0857940:CDS |
| GATGATCTTGATTCACTATT+TGG | 0.153365 | 5_4:+54917543 | None:intergenic |
| TTTGGAAGCACTAATCTTAA+AGG | 0.216562 | 5_4:+54914856 | None:intergenic |
| GGCATCATTCTCATGCTTCT+AGG | 0.228218 | 5_4:-54916749 | Msa0857940:CDS |
| TTGAAGAGAGATGAAGAAAA+AGG | 0.287471 | 5_4:-54914929 | Msa0857940:CDS |
| CTTCTATACTTACAATGTTA+TGG | 0.298201 | 5_4:+54917403 | None:intergenic |
| GAACTAAAAGTCCCGTTCTT+TGG | 0.302160 | 5_4:+54915221 | None:intergenic |
| ATCATCACTCGGAACATTAA+AGG | 0.303398 | 5_4:-54917426 | Msa0857940:CDS |
| CCATGTGGTTCCACTCTTGT+TGG | 0.309635 | 5_4:+54917590 | None:intergenic |
| TAATATTAAAGGGTTGTCTT+TGG | 0.310573 | 5_4:-54914975 | Msa0857940:CDS |
| TTGTTGGTGAAAATATCTTC+TGG | 0.344725 | 5_4:+54917606 | None:intergenic |
| ATGAGAATATGTATGTATCT+TGG | 0.353120 | 5_4:+54917752 | None:intergenic |
| GAAGCAGATTGAATCTTATA+AGG | 0.356325 | 5_4:+54914878 | None:intergenic |
| TAGCACATTGTGGGAAAACT+TGG | 0.371373 | 5_4:-54915084 | Msa0857940:CDS |
| AGAGTTTGTGGTAGGGGAAG+GGG | 0.373912 | 5_4:-54916946 | Msa0857940:CDS |
| CAAGGCCATCCTCATGATAA+AGG | 0.376628 | 5_4:+54917652 | None:intergenic |
| CACATCAATAGCAGCTACTT+TGG | 0.378200 | 5_4:+54914838 | None:intergenic |
| GCATCATTCTCATGCTTCTA+GGG | 0.380106 | 5_4:-54916748 | Msa0857940:CDS |
| AGTAGCAACATAGAGATAAT+TGG | 0.382458 | 5_4:-54915268 | Msa0857940:CDS |
| TATCACTAGTTCTGTTGGTT+TGG | 0.390856 | 5_4:-54914752 | Msa0857940:three_prime_UTR |
| AAAAGTTGAATATTTGTGTT+TGG | 0.391721 | 5_4:+54917507 | None:intergenic |
| GTTTAGAGTTGGTGGTTTCT+GGG | 0.395885 | 5_4:-54916824 | Msa0857940:CDS |
| GGTGGATATGAAAGAAGAGT+TGG | 0.398116 | 5_4:-54916886 | Msa0857940:CDS |
| GGCTATTTCAGCCAAAGAAC+GGG | 0.399009 | 5_4:-54915232 | Msa0857940:CDS |
| GCCACTTAAACGTTTACTTC+AGG | 0.407710 | 5_4:-54916715 | Msa0857940:intron |
| CTTGTCCTTGAATGATTCTC+AGG | 0.407841 | 5_4:+54915034 | None:intergenic |
| TGGGTCACTTTATCAAGGTT+TGG | 0.410083 | 5_4:-54915064 | Msa0857940:CDS |
| AACTCTAAACACCACAATTC+TGG | 0.410084 | 5_4:+54916837 | None:intergenic |
| GGACAAGTATAAATGAGGTT+TGG | 0.421027 | 5_4:-54915018 | Msa0857940:CDS |
| TTTAATGTTCCGAGTGATGA+TGG | 0.425423 | 5_4:+54917428 | None:intergenic |
| GGTTTGTACTCATTAGTGAT+AGG | 0.438302 | 5_4:+54917450 | None:intergenic |
| ACCTGAAGTAAACGTTTAAG+TGG | 0.449339 | 5_4:+54916714 | None:intergenic |
| TGTTGGTGAAAATATCTTCT+GGG | 0.457944 | 5_4:+54917607 | None:intergenic |
| TGTAATATCACTAGTTCTGT+TGG | 0.461192 | 5_4:-54914757 | Msa0857940:three_prime_UTR |
| TGAGAATATGTATGTATCTT+GGG | 0.461843 | 5_4:+54917753 | None:intergenic |
| TACTCATTAGTGATAGGAAA+AGG | 0.467257 | 5_4:+54917456 | None:intergenic |
| GTGATAGGAAAAGGAATCAA+TGG | 0.469817 | 5_4:+54917465 | None:intergenic |
| TGTTGAGTTGTTGAATAGAT+TGG | 0.471791 | 5_4:+54915375 | None:intergenic |
| ATTGTGGTGTTTAGAGTTGG+TGG | 0.473766 | 5_4:-54916832 | Msa0857940:CDS |
| CAGAGTTTGTGGTAGGGGAA+GGG | 0.478274 | 5_4:-54916947 | Msa0857940:CDS |
| AAACTTGGGTCACTTTATCA+AGG | 0.484471 | 5_4:-54915069 | Msa0857940:CDS |
| GCTTCTTGTTTGTAATGAAG+TGG | 0.484584 | 5_4:+54915291 | None:intergenic |
| AATAGGTACCTCAGAGTTTG+TGG | 0.486835 | 5_4:-54916958 | Msa0857940:CDS |
| AAAATTAGTGCAGGGAGTGA+TGG | 0.488027 | 5_4:-54916798 | Msa0857940:CDS |
| GAACTTCTAGCACAGTTTCA+AGG | 0.494000 | 5_4:+54917634 | None:intergenic |
| GATGGTGAAGAAAGTGAAGA+AGG | 0.494517 | 5_4:-54916907 | Msa0857940:CDS |
| AAATGAGGTTTGGAAAATTG+AGG | 0.496792 | 5_4:-54915008 | Msa0857940:CDS |
| GAGTTTGTGGTAGGGGAAGG+GGG | 0.497184 | 5_4:-54916945 | Msa0857940:CDS |
| AATAGATTGGCAGTGCACTT+TGG | 0.498502 | 5_4:+54915388 | None:intergenic |
| TGCGTCATCACATCATATTT+AGG | 0.501079 | 5_4:+54917848 | None:intergenic |
| GTGGATATGAAAGAAGAGTT+GGG | 0.501576 | 5_4:-54916885 | Msa0857940:CDS |
| TTCAAGGACAAGTATAAATG+AGG | 0.502582 | 5_4:-54915023 | Msa0857940:CDS |
| TCTGGGTACAAAATTAGTGC+AGG | 0.503450 | 5_4:-54916807 | Msa0857940:CDS |
| TCAGAGTTTGTGGTAGGGGA+AGG | 0.507152 | 5_4:-54916948 | Msa0857940:CDS |
| GCCATCCTCATGATAAAGGT+TGG | 0.509678 | 5_4:+54917656 | None:intergenic |
| TACCTCAGAGTTTGTGGTAG+GGG | 0.512855 | 5_4:-54916952 | Msa0857940:CDS |
| AGTAAACGTTTAAGTGGCCT+AGG | 0.518850 | 5_4:+54916720 | None:intergenic |
| CCATCCTCATGATAAAGGTT+GGG | 0.519135 | 5_4:+54917657 | None:intergenic |
| GTATTCAAATAGCACATTGT+GGG | 0.530481 | 5_4:-54915093 | Msa0857940:CDS |
| AAAACAATATGTTGCAGCTG+TGG | 0.532218 | 5_4:-54917036 | Msa0857940:CDS |
| GTTGAAAGTATGTATGCAAT+GGG | 0.538137 | 5_4:-54916990 | Msa0857940:CDS |
| TTTGTCTAGTTAAGATCGAA+AGG | 0.538678 | 5_4:+54917960 | None:intergenic |
| CCCAACCTTTATCATGAGGA+TGG | 0.540030 | 5_4:-54917657 | Msa0857940:CDS |
| GCAATGGGTGAAGTGAGAAT+AGG | 0.542727 | 5_4:-54916975 | Msa0857940:CDS |
| TTAATGTTCCGAGTGATGAT+GGG | 0.547777 | 5_4:+54917429 | None:intergenic |
| AGGCTATTTCAGCCAAAGAA+CGG | 0.548971 | 5_4:-54915233 | Msa0857940:CDS |
| TGCAGGGAGTGATGGAAAAG+TGG | 0.552240 | 5_4:-54916790 | Msa0857940:CDS |
| GTGATGGAAAAGTGGCTTGG+AGG | 0.553808 | 5_4:-54916782 | Msa0857940:CDS |
| GTGAAAATATCTTCTGGGAT+GGG | 0.555387 | 5_4:+54917612 | None:intergenic |
| AGAATTGTGGTGTTTAGAGT+TGG | 0.558165 | 5_4:-54916835 | Msa0857940:CDS |
| TTGCTTCATGTTCTTCCATG+TGG | 0.558177 | 5_4:+54917575 | None:intergenic |
| GGAGTGATGGAAAAGTGGCT+TGG | 0.558565 | 5_4:-54916785 | Msa0857940:CDS |
| GGTGAAGAAAGTGAAGAAGG+TGG | 0.561830 | 5_4:-54916904 | Msa0857940:CDS |
| GGGTGTGAATAGCAAGAAGA+TGG | 0.564348 | 5_4:-54916925 | Msa0857940:CDS |
| CATCATTCTCATGCTTCTAG+GGG | 0.571410 | 5_4:-54916747 | Msa0857940:CDS |
| TTGTCCCAACCTTTATCATG+AGG | 0.572543 | 5_4:-54917661 | Msa0857940:CDS |
| GGTGAAAATATCTTCTGGGA+TGG | 0.575300 | 5_4:+54917611 | None:intergenic |
| AAGGACCTGAGAATCATTCA+AGG | 0.576245 | 5_4:-54915039 | Msa0857940:CDS |
| GGTACCTCAGAGTTTGTGGT+AGG | 0.581374 | 5_4:-54916954 | Msa0857940:CDS |
| AAACAATATGTTGCAGCTGT+GGG | 0.581917 | 5_4:-54917035 | Msa0857940:CDS |
| TGTTGAAAGTATGTATGCAA+TGG | 0.588575 | 5_4:-54916991 | Msa0857940:CDS |
| GGTATTCAAATAGCACATTG+TGG | 0.592853 | 5_4:-54915094 | Msa0857940:CDS |
| TCATCTCTCTTCAAATCACT+AGG | 0.595333 | 5_4:+54914938 | None:intergenic |
| TGGCTTGGAGGCAAACACCT+TGG | 0.599300 | 5_4:-54916770 | Msa0857940:CDS |
| CAAAGTAGCTGCTATTGATG+TGG | 0.599483 | 5_4:-54914837 | Msa0857940:CDS |
| AGCACATTGTGGGAAAACTT+GGG | 0.600682 | 5_4:-54915083 | Msa0857940:CDS |
| ACTTTATCAAGGTTTGGTGA+AGG | 0.603544 | 5_4:-54915058 | Msa0857940:CDS |
| CAATATGTTGCAGCTGTGGG+AGG | 0.604968 | 5_4:-54917032 | Msa0857940:CDS |
| CATGGAAGAACATGAAGCAA+TGG | 0.606163 | 5_4:-54917572 | Msa0857940:CDS |
| GTACCTCAGAGTTTGTGGTA+GGG | 0.607485 | 5_4:-54916953 | Msa0857940:CDS |
| CAAGACTATAGAACAGTGGA+TGG | 0.607626 | 5_4:-54915115 | Msa0857940:CDS |
| CTGGGTACAAAATTAGTGCA+GGG | 0.608598 | 5_4:-54916806 | Msa0857940:CDS |
| ATGCTTCTAGGGGTCCACCT+AGG | 0.608662 | 5_4:-54916737 | Msa0857940:CDS |
| TTCAACAACTCAACATGCAT+AGG | 0.619833 | 5_4:-54915367 | Msa0857940:CDS |
| GAAGCATGAGAATGATGCCA+AGG | 0.632801 | 5_4:+54916753 | None:intergenic |
| CCAACAAGAGTGGAACCACA+TGG | 0.640059 | 5_4:-54917590 | Msa0857940:CDS |
| TCTCTCTTCAAATCACTAGG+AGG | 0.655690 | 5_4:+54914941 | None:intergenic |
| AGTACAAACCCATCATCACT+CGG | 0.661995 | 5_4:-54917437 | Msa0857940:CDS |
| TTCCCCTACCACAAACTCTG+AGG | 0.664595 | 5_4:+54916950 | None:intergenic |
| AAACGTTTAAGTGGCCTAGG+TGG | 0.667507 | 5_4:+54916723 | None:intergenic |
| GATATGAAAGAAGAGTTGGG+AGG | 0.679988 | 5_4:-54916882 | Msa0857940:CDS |
| GGCAAAAGAGACCAGAATTG+TGG | 0.686509 | 5_4:-54916848 | Msa0857940:CDS |
| CATACAAGACTATAGAACAG+TGG | 0.696112 | 5_4:-54915119 | Msa0857940:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAAAAAAAATATTAA+AGG | - | chr5_4:54915513-54915532 | Msa0857940:intron | 0.0% |
| !!! | TCATTTTATTTTTATAACAA+TGG | - | chr5_4:54916212-54916231 | Msa0857940:intron | 10.0% |
| !! | TATAACAAAAAATATAAGTT+TGG | - | chr5_4:54916400-54916419 | Msa0857940:intron | 10.0% |
| !!! | AAGTTGATTTTAATATTAAA+GGG | - | chr5_4:54917694-54917713 | Msa0857940:CDS | 10.0% |
| !!! | TTTTGTCTAATTAAAAATTG+TGG | + | chr5_4:54915358-54915377 | None:intergenic | 15.0% |
| !!! | TTCTCAAAATTTTATCTAAA+TGG | - | chr5_4:54915463-54915482 | Msa0857940:intron | 15.0% |
| !!! | ATAATTTTTATGTGTTTTGA+AGG | - | chr5_4:54915595-54915614 | Msa0857940:intron | 15.0% |
| !!! | GAAGTTGATTTTAATATTAA+AGG | - | chr5_4:54917693-54917712 | Msa0857940:CDS | 15.0% |
| !!! | AAGACTTTAGAGATAAAAAA+GGG | + | chr5_4:54914880-54914899 | None:intergenic | 20.0% |
| !!! | AAAGACTTTAGAGATAAAAA+AGG | + | chr5_4:54914881-54914900 | None:intergenic | 20.0% |
| !! | AAAAGTTGAATATTTGTGTT+TGG | + | chr5_4:54915175-54915194 | None:intergenic | 20.0% |
| !! | CCTTTATGTAAAAAAGATAA+GGG | + | chr5_4:54916370-54916389 | None:intergenic | 20.0% |
| !! | ACCTTTATGTAAAAAAGATA+AGG | + | chr5_4:54916371-54916390 | None:intergenic | 20.0% |
| !!! | ATTTCCAAATTGTTTTTTCA+TGG | - | chr5_4:54916519-54916538 | Msa0857940:intron | 20.0% |
| !! | ATTTCCATGAAAAAACAATT+TGG | + | chr5_4:54916526-54916545 | None:intergenic | 20.0% |
| !!! | TAATTTTGTCTAAATTCAAG+TGG | + | chr5_4:54916868-54916887 | None:intergenic | 20.0% |
| !!! | GTTTTGAAAATGTTAATATG+AGG | - | chr5_4:54916967-54916986 | Msa0857940:CDS | 20.0% |
| !!! | ATGTTAATATGAGGAAATTT+TGG | - | chr5_4:54916976-54916995 | Msa0857940:CDS | 20.0% |
| !!! | TGTTAATATGAGGAAATTTT+GGG | - | chr5_4:54916977-54916996 | Msa0857940:CDS | 20.0% |
| !!! | ATTATTGTCTTAATTTGAAC+AGG | - | chr5_4:54917260-54917279 | Msa0857940:intron | 20.0% |
| !!! | TTATTGTCTTAATTTGAACA+GGG | - | chr5_4:54917261-54917280 | Msa0857940:intron | 20.0% |
| !!! | AGATTTTAGTTTAATCAAGT+TGG | + | chr5_4:54917496-54917515 | None:intergenic | 20.0% |
| !!! | TGAAACTGAATTCATATTTT+GGG | - | chr5_4:54917518-54917537 | Msa0857940:CDS | 20.0% |
| ! | TGAGAATATGTATGTATCTT+GGG | + | chr5_4:54914929-54914948 | None:intergenic | 25.0% |
| ! | ATGAGAATATGTATGTATCT+TGG | + | chr5_4:54914930-54914949 | None:intergenic | 25.0% |
| !! | ACAAATATTCAACTTTTGCT+TGG | - | chr5_4:54915178-54915197 | Msa0857940:CDS | 25.0% |
| ! | CTTCTATACTTACAATGTTA+TGG | + | chr5_4:54915279-54915298 | None:intergenic | 25.0% |
| !!! | AAACTCATGTGTTTTTACTT+AGG | - | chr5_4:54915375-54915394 | Msa0857940:CDS | 25.0% |
| ! | TTATGAATTTAAGAAACTCG+TGG | + | chr5_4:54915441-54915460 | None:intergenic | 25.0% |
| !!! | ATTTTTATGTGTTTTGAAGG+AGG | - | chr5_4:54915598-54915617 | Msa0857940:intron | 25.0% |
| !!! | CCCTTATCTTTTTTACATAA+AGG | - | chr5_4:54916367-54916386 | Msa0857940:intron | 25.0% |
| ! | ACAATTTAATAGCTAATGCA+AGG | - | chr5_4:54916596-54916615 | Msa0857940:intron | 25.0% |
| ! | ACTATGATTTAAAGATTGTG+CGG | + | chr5_4:54916831-54916850 | None:intergenic | 25.0% |
| ! | CTATGATACACTTATTTGAA+TGG | + | chr5_4:54916899-54916918 | None:intergenic | 25.0% |
| !! | GTTAATATGAGGAAATTTTG+GGG | - | chr5_4:54916978-54916997 | Msa0857940:CDS | 25.0% |
| !! | TTAATATGAGGAAATTTTGG+GGG | - | chr5_4:54916979-54916998 | Msa0857940:CDS | 25.0% |
| !! | CTTGTCACATATTTTTCTTT+TGG | - | chr5_4:54917078-54917097 | Msa0857940:intron | 25.0% |
| !!! | ACATATTTTTCTTTTGGCTA+TGG | - | chr5_4:54917084-54917103 | Msa0857940:intron | 25.0% |
| !!! | CATATTTTTCTTTTGGCTAT+GGG | - | chr5_4:54917085-54917104 | Msa0857940:intron | 25.0% |
| ! | GTATAATGCATATCAAAAGA+GGG | - | chr5_4:54917114-54917133 | Msa0857940:intron | 25.0% |
| ! | TATAATGCATATCAAAAGAG+GGG | - | chr5_4:54917115-54917134 | Msa0857940:intron | 25.0% |
| !! | CTGAAACTGAATTCATATTT+TGG | - | chr5_4:54917517-54917536 | Msa0857940:CDS | 25.0% |
| ! | TAATATTAAAGGGTTGTCTT+TGG | - | chr5_4:54917704-54917723 | Msa0857940:CDS | 25.0% |
| TTTGTCTAGTTAAGATCGAA+AGG | + | chr5_4:54914722-54914741 | None:intergenic | 30.0% | |
| ! | TGTTGGTGAAAATATCTTCT+GGG | + | chr5_4:54915075-54915094 | None:intergenic | 30.0% |
| ! | TTGTTGGTGAAAATATCTTC+TGG | + | chr5_4:54915076-54915095 | None:intergenic | 30.0% |
| GATGATCTTGATTCACTATT+TGG | + | chr5_4:54915139-54915158 | None:intergenic | 30.0% | |
| TACTCATTAGTGATAGGAAA+AGG | + | chr5_4:54915226-54915245 | None:intergenic | 30.0% | |
| !!! | GATTTTTTCGAAGCTTTTTG+TGG | - | chr5_4:54915485-54915504 | Msa0857940:intron | 30.0% |
| ! | TGTTGAAAGTATGTATGCAA+TGG | - | chr5_4:54915688-54915707 | Msa0857940:intron | 30.0% |
| ! | GTTGAAAGTATGTATGCAAT+GGG | - | chr5_4:54915689-54915708 | Msa0857940:intron | 30.0% |
| AAGGGAAAACAAAGTGAAAT+GGG | + | chr5_4:54916352-54916371 | None:intergenic | 30.0% | |
| TAAGGGAAAACAAAGTGAAA+TGG | + | chr5_4:54916353-54916372 | None:intergenic | 30.0% | |
| !!! | TGACCTTTTTCAAATGAGAA+GGG | + | chr5_4:54916499-54916518 | None:intergenic | 30.0% |
| !!! | TTGACCTTTTTCAAATGAGA+AGG | + | chr5_4:54916500-54916519 | None:intergenic | 30.0% |
| AAATGTAGACCTTCACTTTA+TGG | + | chr5_4:54916562-54916581 | None:intergenic | 30.0% | |
| CTATGATTTAAAGATTGTGC+GGG | + | chr5_4:54916830-54916849 | None:intergenic | 30.0% | |
| !! | ATGTCGATTTATTGTTCAAC+CGG | - | chr5_4:54916922-54916941 | Msa0857940:CDS | 30.0% |
| GGTATAATGCATATCAAAAG+AGG | - | chr5_4:54917113-54917132 | Msa0857940:intron | 30.0% | |
| TCAAAAGAGGGGAATATAAA+AGG | - | chr5_4:54917126-54917145 | Msa0857940:intron | 30.0% | |
| ! | TGTTGAGTTGTTGAATAGAT+TGG | + | chr5_4:54917307-54917326 | None:intergenic | 30.0% |
| AGTAGCAACATAGAGATAAT+TGG | - | chr5_4:54917411-54917430 | Msa0857940:intron | 30.0% | |
| ! | ATAATTGGTCACACAGTTTT+AGG | - | chr5_4:54917426-54917445 | Msa0857940:CDS | 30.0% |
| GTATTCAAATAGCACATTGT+GGG | - | chr5_4:54917586-54917605 | Msa0857940:CDS | 30.0% | |
| TTCAAGGACAAGTATAAATG+AGG | - | chr5_4:54917656-54917675 | Msa0857940:CDS | 30.0% | |
| AAATGAGGTTTGGAAAATTG+AGG | - | chr5_4:54917671-54917690 | Msa0857940:CDS | 30.0% | |
| TTGAAGAGAGATGAAGAAAA+AGG | - | chr5_4:54917750-54917769 | Msa0857940:CDS | 30.0% | |
| GAAGCAGATTGAATCTTATA+AGG | + | chr5_4:54917804-54917823 | None:intergenic | 30.0% | |
| !! | TTTGGAAGCACTAATCTTAA+AGG | + | chr5_4:54917826-54917845 | None:intergenic | 30.0% |
| !! | TGTAATATCACTAGTTCTGT+TGG | - | chr5_4:54917922-54917941 | Msa0857940:five_prime_UTR | 30.0% |
| TGCGTCATCACATCATATTT+AGG | + | chr5_4:54914834-54914853 | None:intergenic | 35.0% | |
| !! | GTGAAAATATCTTCTGGGAT+GGG | + | chr5_4:54915070-54915089 | None:intergenic | 35.0% |
| ! | GATATTTTCACCAACAAGAG+TGG | - | chr5_4:54915079-54915098 | Msa0857940:CDS | 35.0% |
| GTGATAGGAAAAGGAATCAA+TGG | + | chr5_4:54915217-54915236 | None:intergenic | 35.0% | |
| GGTTTGTACTCATTAGTGAT+AGG | + | chr5_4:54915232-54915251 | None:intergenic | 35.0% | |
| TTAATGTTCCGAGTGATGAT+GGG | + | chr5_4:54915253-54915272 | None:intergenic | 35.0% | |
| TTTAATGTTCCGAGTGATGA+TGG | + | chr5_4:54915254-54915273 | None:intergenic | 35.0% | |
| ATCATCACTCGGAACATTAA+AGG | - | chr5_4:54915253-54915272 | Msa0857940:CDS | 35.0% | |
| AAAACAATATGTTGCAGCTG+TGG | - | chr5_4:54915643-54915662 | Msa0857940:intron | 35.0% | |
| AAACAATATGTTGCAGCTGT+GGG | - | chr5_4:54915644-54915663 | Msa0857940:intron | 35.0% | |
| GTGGATATGAAAGAAGAGTT+GGG | - | chr5_4:54915794-54915813 | Msa0857940:intron | 35.0% | |
| AACTCTAAACACCACAATTC+TGG | + | chr5_4:54915845-54915864 | None:intergenic | 35.0% | |
| ! | AGAATTGTGGTGTTTAGAGT+TGG | - | chr5_4:54915844-54915863 | Msa0857940:intron | 35.0% |
| ACCTGAAGTAAACGTTTAAG+TGG | + | chr5_4:54915968-54915987 | None:intergenic | 35.0% | |
| CAATTAGGCAATGTTTGGTT+AGG | + | chr5_4:54916440-54916459 | None:intergenic | 35.0% | |
| CTAACCAAACATTGCCTAAT+TGG | - | chr5_4:54916438-54916457 | Msa0857940:intron | 35.0% | |
| CAAACCAATTAGGCAATGTT+TGG | + | chr5_4:54916445-54916464 | None:intergenic | 35.0% | |
| TGGGTAGATTCAAACCAATT+AGG | + | chr5_4:54916455-54916474 | None:intergenic | 35.0% | |
| AATCTACCCAACCTAAAACT+AGG | - | chr5_4:54916465-54916484 | Msa0857940:intron | 35.0% | |
| TAGACCTTCACTTTATGGTA+GGG | + | chr5_4:54916557-54916576 | None:intergenic | 35.0% | |
| AGGCGTCACAACTAATTAAT+TGG | + | chr5_4:54916650-54916669 | None:intergenic | 35.0% | |
| ! | GACAAGCATTGTTGACATTT+AGG | + | chr5_4:54916670-54916689 | None:intergenic | 35.0% |
| ! | TGGTTTGCAAAATGTTGTGT+TGG | - | chr5_4:54917004-54917023 | Msa0857940:CDS | 35.0% |
| AAAGAGGGGAATATAAAAGG+AGG | - | chr5_4:54917129-54917148 | Msa0857940:intron | 35.0% | |
| TTCAACAACTCAACATGCAT+AGG | - | chr5_4:54917312-54917331 | Msa0857940:intron | 35.0% | |
| ! | GCTTCTTGTTTGTAATGAAG+TGG | + | chr5_4:54917391-54917410 | None:intergenic | 35.0% |
| CATACAAGACTATAGAACAG+TGG | - | chr5_4:54917560-54917579 | Msa0857940:CDS | 35.0% | |
| GGTATTCAAATAGCACATTG+TGG | - | chr5_4:54917585-54917604 | Msa0857940:CDS | 35.0% | |
| ! | AAACTTGGGTCACTTTATCA+AGG | - | chr5_4:54917610-54917629 | Msa0857940:CDS | 35.0% |
| !! | ACTTTATCAAGGTTTGGTGA+AGG | - | chr5_4:54917621-54917640 | Msa0857940:CDS | 35.0% |
| GGACAAGTATAAATGAGGTT+TGG | - | chr5_4:54917661-54917680 | Msa0857940:CDS | 35.0% | |
| TCATCTCTCTTCAAATCACT+AGG | + | chr5_4:54917744-54917763 | None:intergenic | 35.0% | |
| !! | TATCACTAGTTCTGTTGGTT+TGG | - | chr5_4:54917927-54917946 | Msa0857940:five_prime_UTR | 35.0% |
| ACATCATATTTAGGCTCGCA+AGG | + | chr5_4:54914825-54914844 | None:intergenic | 40.0% | |
| TTGTCCCAACCTTTATCATG+AGG | - | chr5_4:54915018-54915037 | Msa0857940:CDS | 40.0% | |
| CCATCCTCATGATAAAGGTT+GGG | + | chr5_4:54915025-54915044 | None:intergenic | 40.0% | |
| GAACTTCTAGCACAGTTTCA+AGG | + | chr5_4:54915048-54915067 | None:intergenic | 40.0% | |
| ! | GGTGAAAATATCTTCTGGGA+TGG | + | chr5_4:54915071-54915090 | None:intergenic | 40.0% |
| TTGCTTCATGTTCTTCCATG+TGG | + | chr5_4:54915107-54915126 | None:intergenic | 40.0% | |
| CATGGAAGAACATGAAGCAA+TGG | - | chr5_4:54915107-54915126 | Msa0857940:CDS | 40.0% | |
| !!! | CAACTTTTGCTTGGTGTTGT+AGG | - | chr5_4:54915187-54915206 | Msa0857940:CDS | 40.0% |
| AGTACAAACCCATCATCACT+CGG | - | chr5_4:54915242-54915261 | Msa0857940:CDS | 40.0% | |
| AATAGGTACCTCAGAGTTTG+TGG | - | chr5_4:54915721-54915740 | Msa0857940:intron | 40.0% | |
| GATGGTGAAGAAAGTGAAGA+AGG | - | chr5_4:54915772-54915791 | Msa0857940:intron | 40.0% | |
| GGTGGATATGAAAGAAGAGT+TGG | - | chr5_4:54915793-54915812 | Msa0857940:intron | 40.0% | |
| GATATGAAAGAAGAGTTGGG+AGG | - | chr5_4:54915797-54915816 | Msa0857940:intron | 40.0% | |
| ! | ATTGTGGTGTTTAGAGTTGG+TGG | - | chr5_4:54915847-54915866 | Msa0857940:intron | 40.0% |
| !! | TGTTTAGAGTTGGTGGTTTC+TGG | - | chr5_4:54915854-54915873 | Msa0857940:intron | 40.0% |
| !! | GTTTAGAGTTGGTGGTTTCT+GGG | - | chr5_4:54915855-54915874 | Msa0857940:intron | 40.0% |
| TCTGGGTACAAAATTAGTGC+AGG | - | chr5_4:54915872-54915891 | Msa0857940:intron | 40.0% | |
| CTGGGTACAAAATTAGTGCA+GGG | - | chr5_4:54915873-54915892 | Msa0857940:intron | 40.0% | |
| AAAATTAGTGCAGGGAGTGA+TGG | - | chr5_4:54915881-54915900 | Msa0857940:intron | 40.0% | |
| GCATCATTCTCATGCTTCTA+GGG | - | chr5_4:54915931-54915950 | Msa0857940:intron | 40.0% | |
| CATCATTCTCATGCTTCTAG+GGG | - | chr5_4:54915932-54915951 | Msa0857940:intron | 40.0% | |
| AGTAAACGTTTAAGTGGCCT+AGG | + | chr5_4:54915962-54915981 | None:intergenic | 40.0% | |
| GCCACTTAAACGTTTACTTC+AGG | - | chr5_4:54915964-54915983 | Msa0857940:intron | 40.0% | |
| ! | TAACAATGGACTCAATCCCA+TGG | - | chr5_4:54916226-54916245 | Msa0857940:intron | 40.0% |
| !!! | GAAGCACCTAGTTTTAGGTT+GGG | + | chr5_4:54916474-54916493 | None:intergenic | 40.0% |
| !!! | CCTTTTTCAAATGAGAAGGG+AGG | + | chr5_4:54916496-54916515 | None:intergenic | 40.0% |
| CCTCCCTTCTCATTTGAAAA+AGG | - | chr5_4:54916493-54916512 | Msa0857940:intron | 40.0% | |
| CTTCACTTTATGGTAGGGAT+AGG | + | chr5_4:54916552-54916571 | None:intergenic | 40.0% | |
| CTATCCCTACCATAAAGTGA+AGG | - | chr5_4:54916550-54916569 | Msa0857940:intron | 40.0% | |
| GTAGACCTTCACTTTATGGT+AGG | + | chr5_4:54916558-54916577 | None:intergenic | 40.0% | |
| CAAAACTAGACCGAACTTCA+TGG | + | chr5_4:54916953-54916972 | None:intergenic | 40.0% | |
| !! | TTCTTTTGGCTATGGGACAA+CGG | - | chr5_4:54917092-54917111 | Msa0857940:intron | 40.0% |
| AATAGATTGGCAGTGCACTT+TGG | + | chr5_4:54917294-54917313 | None:intergenic | 40.0% | |
| ! | AGGCTATTTCAGCCAAAGAA+CGG | - | chr5_4:54917446-54917465 | Msa0857940:CDS | 40.0% |
| GAACTAAAAGTCCCGTTCTT+TGG | + | chr5_4:54917461-54917480 | None:intergenic | 40.0% | |
| CAAGACTATAGAACAGTGGA+TGG | - | chr5_4:54917564-54917583 | Msa0857940:CDS | 40.0% | |
| TAGCACATTGTGGGAAAACT+TGG | - | chr5_4:54917595-54917614 | Msa0857940:CDS | 40.0% | |
| AGCACATTGTGGGAAAACTT+GGG | - | chr5_4:54917596-54917615 | Msa0857940:CDS | 40.0% | |
| ! | TGGGTCACTTTATCAAGGTT+TGG | - | chr5_4:54917615-54917634 | Msa0857940:CDS | 40.0% |
| AAGGACCTGAGAATCATTCA+AGG | - | chr5_4:54917640-54917659 | Msa0857940:CDS | 40.0% | |
| CTTGTCCTTGAATGATTCTC+AGG | + | chr5_4:54917648-54917667 | None:intergenic | 40.0% | |
| TCTCTCTTCAAATCACTAGG+AGG | + | chr5_4:54917741-54917760 | None:intergenic | 40.0% | |
| GAGAGATGAAGAAAAAGGAG+TGG | - | chr5_4:54917755-54917774 | Msa0857940:CDS | 40.0% | |
| CACATCAATAGCAGCTACTT+TGG | + | chr5_4:54917844-54917863 | None:intergenic | 40.0% | |
| CAAAGTAGCTGCTATTGATG+TGG | - | chr5_4:54917842-54917861 | Msa0857940:five_prime_UTR | 40.0% | |
| CCCAACCTTTATCATGAGGA+TGG | - | chr5_4:54915022-54915041 | Msa0857940:CDS | 45.0% | |
| GCCATCCTCATGATAAAGGT+TGG | + | chr5_4:54915026-54915045 | None:intergenic | 45.0% | |
| CAAGGCCATCCTCATGATAA+AGG | + | chr5_4:54915030-54915049 | None:intergenic | 45.0% | |
| GCAATGGGTGAAGTGAGAAT+AGG | - | chr5_4:54915704-54915723 | Msa0857940:intron | 45.0% | |
| GTACCTCAGAGTTTGTGGTA+GGG | - | chr5_4:54915726-54915745 | Msa0857940:intron | 45.0% | |
| TACCTCAGAGTTTGTGGTAG+GGG | - | chr5_4:54915727-54915746 | Msa0857940:intron | 45.0% | |
| GGGTGTGAATAGCAAGAAGA+TGG | - | chr5_4:54915754-54915773 | Msa0857940:intron | 45.0% | |
| GGTGAAGAAAGTGAAGAAGG+TGG | - | chr5_4:54915775-54915794 | Msa0857940:intron | 45.0% | |
| !! | AGTTGGGAGGTTTTGTGTTG+TGG | - | chr5_4:54915810-54915829 | Msa0857940:intron | 45.0% |
| GGCAAAAGAGACCAGAATTG+TGG | - | chr5_4:54915831-54915850 | Msa0857940:intron | 45.0% | |
| GAAGCATGAGAATGATGCCA+AGG | + | chr5_4:54915929-54915948 | None:intergenic | 45.0% | |
| GGCATCATTCTCATGCTTCT+AGG | - | chr5_4:54915930-54915949 | Msa0857940:intron | 45.0% | |
| AAACGTTTAAGTGGCCTAGG+TGG | + | chr5_4:54915959-54915978 | None:intergenic | 45.0% | |
| !!! | GGAAGCACCTAGTTTTAGGT+TGG | + | chr5_4:54916475-54916494 | None:intergenic | 45.0% |
| ATTGTGCGGGTTTGATGCAA+GGG | + | chr5_4:54916817-54916836 | None:intergenic | 45.0% | |
| ACCGGTTGAACCATGAAGTT+CGG | - | chr5_4:54916940-54916959 | Msa0857940:CDS | 45.0% | |
| ACCGAACTTCATGGTTCAAC+CGG | + | chr5_4:54916944-54916963 | None:intergenic | 45.0% | |
| !! | ATGAGGAAATTTTGGGGGTG+TGG | - | chr5_4:54916984-54917003 | Msa0857940:CDS | 45.0% |
| ! | GGCTATTTCAGCCAAAGAAC+GGG | - | chr5_4:54917447-54917466 | Msa0857940:CDS | 45.0% |
| CCATGTGGTTCCACTCTTGT+TGG | + | chr5_4:54915092-54915111 | None:intergenic | 50.0% | |
| CCAACAAGAGTGGAACCACA+TGG | - | chr5_4:54915089-54915108 | Msa0857940:CDS | 50.0% | |
| !!! | TGTTTTGAAGGAGGCGTCGA+TGG | - | chr5_4:54915607-54915626 | Msa0857940:intron | 50.0% |
| CAATATGTTGCAGCTGTGGG+AGG | - | chr5_4:54915647-54915666 | Msa0857940:intron | 50.0% | |
| GGTACCTCAGAGTTTGTGGT+AGG | - | chr5_4:54915725-54915744 | Msa0857940:intron | 50.0% | |
| TTCCCCTACCACAAACTCTG+AGG | + | chr5_4:54915732-54915751 | None:intergenic | 50.0% | |
| TCAGAGTTTGTGGTAGGGGA+AGG | - | chr5_4:54915731-54915750 | Msa0857940:intron | 50.0% | |
| CAGAGTTTGTGGTAGGGGAA+GGG | - | chr5_4:54915732-54915751 | Msa0857940:intron | 50.0% | |
| AGAGTTTGTGGTAGGGGAAG+GGG | - | chr5_4:54915733-54915752 | Msa0857940:intron | 50.0% | |
| ! | TGCAGGGAGTGATGGAAAAG+TGG | - | chr5_4:54915889-54915908 | Msa0857940:intron | 50.0% |
| ! | GGAGTGATGGAAAAGTGGCT+TGG | - | chr5_4:54915894-54915913 | Msa0857940:intron | 50.0% |
| ! | GTGATGGAAAAGTGGCTTGG+AGG | - | chr5_4:54915897-54915916 | Msa0857940:intron | 50.0% |
| ! | CAATGGACTCAATCCCATGG+TGG | - | chr5_4:54916229-54916248 | Msa0857940:intron | 50.0% |
| !!! | GGGAGGAAGCACCTAGTTTT+AGG | + | chr5_4:54916479-54916498 | None:intergenic | 50.0% |
| ATCAAAGGGATTGGAAGGGC+AGG | + | chr5_4:54916767-54916786 | None:intergenic | 50.0% | |
| TGCCCTTCCAATCCCTTTGA+TGG | - | chr5_4:54916766-54916785 | Msa0857940:CDS | 50.0% | |
| GCCCTTCCAATCCCTTTGAT+GGG | - | chr5_4:54916767-54916786 | Msa0857940:CDS | 50.0% | |
| GCCCATCAAAGGGATTGGAA+GGG | + | chr5_4:54916771-54916790 | None:intergenic | 50.0% | |
| GGACGACTCCAATCATCTCA+CGG | + | chr5_4:54916796-54916815 | None:intergenic | 50.0% | |
| GATTGTGCGGGTTTGATGCA+AGG | + | chr5_4:54916818-54916837 | None:intergenic | 50.0% | |
| GAGTTTGTGGTAGGGGAAGG+GGG | - | chr5_4:54915734-54915753 | Msa0857940:intron | 55.0% | |
| ! | TGGCTTGGAGGCAAACACCT+TGG | - | chr5_4:54915909-54915928 | Msa0857940:intron | 55.0% |
| ! | ATGCTTCTAGGGGTCCACCT+AGG | - | chr5_4:54915942-54915961 | Msa0857940:intron | 55.0% |
| TGGACTCAATCCCATGGTGG+AGG | - | chr5_4:54916232-54916251 | Msa0857940:intron | 55.0% | |
| ! | GGACTCAATCCCATGGTGGA+GGG | - | chr5_4:54916233-54916252 | Msa0857940:intron | 55.0% |
| ATTTCCCAGCCCTCCACCAT+GGG | + | chr5_4:54916245-54916264 | None:intergenic | 55.0% | |
| AATTTCCCAGCCCTCCACCA+TGG | + | chr5_4:54916246-54916265 | None:intergenic | 55.0% | |
| GGCCCATCAAAGGGATTGGA+AGG | + | chr5_4:54916772-54916791 | None:intergenic | 55.0% | |
| TCTCACGGTGGCCCATCAAA+GGG | + | chr5_4:54916781-54916800 | None:intergenic | 55.0% | |
| ATCTCACGGTGGCCCATCAA+AGG | + | chr5_4:54916782-54916801 | None:intergenic | 55.0% | |
| ATGGGCCACCGTGAGATGAT+TGG | - | chr5_4:54916785-54916804 | Msa0857940:CDS | 55.0% | |
| CGACTCCAATCATCTCACGG+TGG | + | chr5_4:54916793-54916812 | None:intergenic | 55.0% | |
| ! | TCAATCCCATGGTGGAGGGC+TGG | - | chr5_4:54916237-54916256 | Msa0857940:intron | 60.0% |
| ! | CAATCCCATGGTGGAGGGCT+GGG | - | chr5_4:54916238-54916257 | Msa0857940:intron | 60.0% |
| CGGTGGCCCATCAAAGGGAT+TGG | + | chr5_4:54916776-54916795 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 54914709 | 54917992 | 54914709 | ID=Msa0857940;Name=Msa0857940 |
| chr5_4 | mRNA | 54914709 | 54917992 | 54914709 | ID=Msa0857940-mRNA-1;Parent=Msa0857940;Name=Msa0857940-mRNA-1;_AED=0.09;_eAED=0.09;_QI=148|1|1|1|0.66|0.5|4|90|455 |
| chr5_4 | exon | 54914709 | 54915419 | 54914709 | ID=Msa0857940-mRNA-1:exon:16865;Parent=Msa0857940-mRNA-1 |
| chr5_4 | exon | 54916716 | 54917084 | 54916716 | ID=Msa0857940-mRNA-1:exon:16864;Parent=Msa0857940-mRNA-1 |
| chr5_4 | exon | 54917416 | 54917870 | 54917416 | ID=Msa0857940-mRNA-1:exon:16863;Parent=Msa0857940-mRNA-1 |
| chr5_4 | exon | 54917922 | 54917992 | 54917922 | ID=Msa0857940-mRNA-1:exon:16862;Parent=Msa0857940-mRNA-1 |
| chr5_4 | five_prime_UTR | 54917922 | 54917992 | 54917922 | ID=Msa0857940-mRNA-1:five_prime_utr;Parent=Msa0857940-mRNA-1 |
| chr5_4 | five_prime_UTR | 54917794 | 54917870 | 54917794 | ID=Msa0857940-mRNA-1:five_prime_utr;Parent=Msa0857940-mRNA-1 |
| chr5_4 | CDS | 54917416 | 54917793 | 54917416 | ID=Msa0857940-mRNA-1:cds;Parent=Msa0857940-mRNA-1 |
| chr5_4 | CDS | 54916716 | 54917084 | 54916716 | ID=Msa0857940-mRNA-1:cds;Parent=Msa0857940-mRNA-1 |
| chr5_4 | CDS | 54914799 | 54915419 | 54914799 | ID=Msa0857940-mRNA-1:cds;Parent=Msa0857940-mRNA-1 |
| chr5_4 | three_prime_UTR | 54914709 | 54914798 | 54914709 | ID=Msa0857940-mRNA-1:three_prime_utr;Parent=Msa0857940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
