AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0639220


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0639220 MtrunA17_Chr4g0050641 95.632 435 19 0 36 470 7 441 0.0 820
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0639220 AT3G09580.1 65.895 475 152 4 4 469 3 476 0.0 606

Find 110 sgRNAs with CRISPR-Local

Find 330 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGATGGAGCTTTGGTTTC+TGG 0.114822 4_3:+34889370 Msa0639220:CDS
GATTATAATGACGCCGGTTT+TGG 0.217992 4_3:-34888153 None:intergenic
GGATTGAATTTGAATGGTTT+TGG 0.265688 4_3:-34888089 None:intergenic
GGAAGCATTTGAGGACTTAT+AGG 0.268361 4_3:+34889242 Msa0639220:CDS
CTAGAAGTTGTTTCGAGTTC+GGG 0.279886 4_3:-34888668 None:intergenic
TTGACCTCAGCTACATTTGA+TGG 0.284242 4_3:+34889355 Msa0639220:CDS
AACCTCGCCGCTAACTGTTC+TGG 0.286582 4_3:-34888764 None:intergenic
GGCAAGTTGGGAGGAGCATT+TGG 0.286950 4_3:-34888111 None:intergenic
GGGTTGGTTTGGAGATAAAA+TGG 0.298136 4_3:+34889210 Msa0639220:CDS
TAAGGTGGTTCAAGAACTTT+CGG 0.316232 4_3:+34889189 Msa0639220:CDS
TGGAACCGATAGGGTTAGTT+AGG 0.316739 4_3:-34888472 None:intergenic
AGCTACATTTGATGGAGCTT+TGG 0.321131 4_3:+34889363 Msa0639220:CDS
CAACCTCACACGCGGCGAAT+TGG 0.324674 4_3:-34888843 None:intergenic
TGCTTTGGTTAAATTATTAC+CGG 0.329462 4_3:+34888922 Msa0639220:CDS
AAGGTGGTTCAAGAACTTTC+GGG 0.337683 4_3:+34889190 Msa0639220:CDS
TTGGTTTCAGTATCATTGAT+TGG 0.342124 4_3:+34889130 Msa0639220:CDS
TCTAGAAGTTGTTTCGAGTT+CGG 0.358023 4_3:-34888669 None:intergenic
GAAGAAGATGGAGCGGTTTG+TGG 0.359878 4_3:-34888057 None:intergenic
CATTTGGGATTGAATTTGAA+TGG 0.363376 4_3:-34888095 None:intergenic
CAAGAACTTTCGGGTTGGTT+TGG 0.368642 4_3:+34889199 Msa0639220:CDS
GATCAGCGACGGTGTGGAAT+TGG 0.372588 4_3:-34888418 None:intergenic
TGCCGTTGAAGAACCTGCTT+TGG 0.379343 4_3:+34888907 Msa0639220:CDS
AGCAGCTAAGCCGGCGAGGC+CGG 0.382512 4_3:-34888180 None:intergenic
ATCTTCAAGTGTCTCGCTCT+CGG 0.393794 4_3:+34888704 Msa0639220:CDS
ATAAACCCGGTTCAATTGTT+GGG 0.395707 4_3:-34889315 None:intergenic
TGGAGAAGAAGTGAAGAAGA+TGG 0.397924 4_3:-34888069 None:intergenic
GATAAGCGGTGATGAAGATT+TGG 0.402664 4_3:-34888316 None:intergenic
GCAAGTTGGGAGGAGCATTT+GGG 0.408251 4_3:-34888110 None:intergenic
TTCGTAGGTGGACACTGATT+AGG 0.415330 4_3:-34889280 None:intergenic
TATAAACCCGGTTCAATTGT+TGG 0.416106 4_3:-34889316 None:intergenic
TCACGGACCGGGATTTGATC+CGG 0.419244 4_3:-34889010 None:intergenic
ATCATTGATTGGGTTATTTG+AGG 0.423123 4_3:+34889141 Msa0639220:CDS
GATGAGTAATTTATCGAAGA+TGG 0.424531 4_3:-34888492 None:intergenic
TGGTTTCAGTATCATTGATT+GGG 0.425020 4_3:+34889131 Msa0639220:CDS
TTGTTTGGTGGTGCATATGA+TGG 0.430727 4_3:-34889103 None:intergenic
TAAAAGAATGGAAGCATTTG+AGG 0.433362 4_3:+34889233 Msa0639220:CDS
ACTGAAACCAATGCCTTGTT+TGG 0.439459 4_3:-34889118 None:intergenic
GGTAATAATTTAACCAAAGC+AGG 0.443673 4_3:-34888920 None:intergenic
AAAACCGGCGTCATTATAAT+CGG 0.443912 4_3:+34888155 Msa0639220:CDS
ATAATCGGCGCCGGCCTCGC+CGG 0.451537 4_3:+34888170 Msa0639220:CDS
TTAAATGATAGAGCCTTCAT+TGG 0.454783 4_3:+34889415 Msa0639220:CDS
AAACAAACCGTACTCCGAAC+CGG 0.454922 4_3:-34888971 None:intergenic
ATGGGTTGCAGCAGCTAAGC+CGG 0.461071 4_3:-34888189 None:intergenic
AAGATGGAGCGGTTTGTGGA+AGG 0.461867 4_3:-34888053 None:intergenic
TGATGATGAGTTAGTGCTTA+AGG 0.464469 4_3:+34889171 Msa0639220:CDS
CCCTCCTCACTCCCCAAAAC+CGG 0.465238 4_3:+34888140 Msa0639220:CDS
AGATGGAGCGGTTTGTGGAA+GGG 0.468158 4_3:-34888052 None:intergenic
GGTTTAAGGATTGGTAATTG+AGG 0.468393 4_3:-34888355 None:intergenic
GAGATAAAATGGTAAAAGAA+TGG 0.472262 4_3:+34889221 Msa0639220:CDS
CTCATCGGAACCACCAGAAT+CGG 0.475119 4_3:+34888509 Msa0639220:CDS
ATGATTCGAGGAGGAGGAAA+GGG 0.481642 4_3:-34888229 None:intergenic
GATGATTCGAGGAGGAGGAA+AGG 0.494340 4_3:-34888230 None:intergenic
CGGGATTTGATCCGGGTTCG+CGG 0.510981 4_3:-34889002 None:intergenic
GACGCGACCACCGACGGCGT+TGG 0.512717 4_3:-34888252 None:intergenic
ATGGAGCTTTGGTTTCTGGT+AGG 0.513614 4_3:+34889374 Msa0639220:CDS
TGGAGCGGTTTGTGGAAGGG+AGG 0.514521 4_3:-34888049 None:intergenic
GGAGCGGTTTGTGGAAGGGA+GGG 0.524782 4_3:-34888048 None:intergenic
AACAGAACTGGATCACGGAC+CGG 0.529245 4_3:-34889022 None:intergenic
ACAGAACTGGATCACGGACC+GGG 0.531237 4_3:-34889021 None:intergenic
CACGGACCGGGATTTGATCC+GGG 0.532950 4_3:-34889009 None:intergenic
TCTCGGCGAAAATACTCTTC+CGG 0.537560 4_3:+34888721 Msa0639220:CDS
AAGAAGTGAAGAAGATGGAG+CGG 0.538503 4_3:-34888064 None:intergenic
GGAACCGATAGGGTTAGTTA+GGG 0.540536 4_3:-34888471 None:intergenic
GAAACCAATGCCTTGTTTGG+TGG 0.542262 4_3:-34889115 None:intergenic
CGCGAACCCGGATCAAATCC+CGG 0.551217 4_3:+34889003 Msa0639220:CDS
ATGAAGCAATTAGCCAATGA+AGG 0.551327 4_3:-34889428 None:intergenic
ATCTTCGATAAATTACTCAT+CGG 0.559784 4_3:+34888494 Msa0639220:CDS
GGTGCGGACGCGACCACCGA+CGG 0.559991 4_3:-34888258 None:intergenic
GTCCGCACCGACATTGTCGA+CGG 0.561381 4_3:+34888272 Msa0639220:CDS
AGCGATTCCAGAACAGTTAG+CGG 0.561707 4_3:+34888757 Msa0639220:CDS
GAATCATCCAACGCCGTCGG+TGG 0.562334 4_3:+34888245 Msa0639220:CDS
ATCATATGCACCACCAAACA+AGG 0.563468 4_3:+34889105 Msa0639220:CDS
TGCACCACCAAACAAGGCAT+TGG 0.563916 4_3:+34889111 Msa0639220:CDS
CGTTGGATGATTCGAGGAGG+AGG 0.564310 4_3:-34888235 None:intergenic
TATCGAAGATGGAACCGATA+GGG 0.569411 4_3:-34888481 None:intergenic
GGCGTCATTATAATCGGCGC+CGG 0.571907 4_3:+34888161 Msa0639220:CDS
AACCAAAGCAGGTTCTTCAA+CGG 0.572199 4_3:-34888909 None:intergenic
TGCGGTAAGAGTTTGTTCGT+CGG 0.575993 4_3:-34888546 None:intergenic
ATCGCTGAGATACCGTTCGC+CGG 0.576771 4_3:-34888740 None:intergenic
CGACGGCGTTGGATGATTCG+AGG 0.576838 4_3:-34888241 None:intergenic
CTCGAATCATCCAACGCCGT+CGG 0.578935 4_3:+34888242 Msa0639220:CDS
AGATTTGGAAGCCACGGTCA+AGG 0.586167 4_3:-34888301 None:intergenic
CCGCGTGTGAGGTTGCAAAA+CGG 0.593377 4_3:+34888851 Msa0639220:CDS
GCTTTGGTTAAATTATTACC+GGG 0.596571 4_3:+34888923 Msa0639220:CDS
GCTCCAATTCGCCGCGTGTG+AGG 0.600636 4_3:+34888840 Msa0639220:CDS
TGATGAAGATTTGGAAGCCA+CGG 0.605471 4_3:-34888307 None:intergenic
GAGGAAGCCGTCGACAATGT+CGG 0.609084 4_3:-34888279 None:intergenic
GGTGCTAAAATCTTCTACAA+CGG 0.611207 4_3:+34888395 Msa0639220:CDS
AGCTCCATCAAATGTAGCTG+AGG 0.611870 4_3:-34889359 None:intergenic
TTATCGAAGATGGAACCGAT+AGG 0.611986 4_3:-34888482 None:intergenic
AAATCCCTAACTAACCCTAT+CGG 0.614614 4_3:+34888467 Msa0639220:CDS
TGTGAGGACACCGATTCTGG+TGG 0.616357 4_3:-34888519 None:intergenic
GACGGCTTCCTCCTTGACCG+TGG 0.618515 4_3:+34888290 Msa0639220:CDS
TGGTTCAAGAACTTTCGGGT+TGG 0.622317 4_3:+34889194 Msa0639220:CDS
TTCAGCAAGATTGAATCTGA+CGG 0.632422 4_3:-34888788 None:intergenic
ATTGGAGCCGTCAAAATCAA+CGG 0.640272 4_3:-34888825 None:intergenic
GAACCGGGTTTATATTTGTG+TGG 0.640779 4_3:+34889325 Msa0639220:CDS
GAAAATACTCTTCCGGCGAA+CGG 0.650038 4_3:+34888728 Msa0639220:CDS
GAGTCGAAGAAATGGCGAAG+TGG 0.653341 4_3:-34888440 None:intergenic
AATTGTGGGAACTTCTTCTG+CGG 0.656744 4_3:-34888564 None:intergenic
GGCGCCGATTATAATGACGC+CGG 0.658005 4_3:-34888159 None:intergenic
TTCCAGAACAGTTAGCGGCG+AGG 0.659731 4_3:+34888762 Msa0639220:CDS
ATGGCGAAGTGGATCAGCGA+CGG 0.660659 4_3:-34888429 None:intergenic
TCACCACACAAATATAAACC+CGG 0.669871 4_3:-34889328 None:intergenic
TTGCAGCAGCTAAGCCGGCG+AGG 0.677374 4_3:-34888184 None:intergenic
GAAGTGGATCAGCGACGGTG+TGG 0.679688 4_3:-34888424 None:intergenic
TTTGGAAGCCACGGTCAAGG+AGG 0.708323 4_3:-34888298 None:intergenic
AGCCGTCGACAATGTCGGTG+CGG 0.709135 4_3:-34888274 None:intergenic
TGATGAGTTAGTGCTTAAGG+TGG 0.712943 4_3:+34889174 Msa0639220:CDS
CGGCGTTGGATGATTCGAGG+AGG 0.723146 4_3:-34888238 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTAGTAAGTCAATTGT+GGG - chr4_3:34888581-34888600 None:intergenic 20.0%
!!! TTTTTTAGTAAGTCAATTGT+GGG - chr4_3:34888581-34888600 None:intergenic 20.0%
! ATCTTCGATAAATTACTCAT+CGG + chr4_3:34888494-34888513 Msa0639220:CDS 25.0%
!!! CTTTTTTAGTAAGTCAATTG+TGG - chr4_3:34888582-34888601 None:intergenic 25.0%
!! ATTGACTTACTAAAAAAGCT+AGG + chr4_3:34888584-34888603 Msa0639220:CDS 25.0%
! TGCTTTGGTTAAATTATTAC+CGG + chr4_3:34888922-34888941 Msa0639220:CDS 25.0%
! GAGATAAAATGGTAAAAGAA+TGG + chr4_3:34889221-34889240 Msa0639220:CDS 25.0%
! ATCTTCGATAAATTACTCAT+CGG + chr4_3:34888494-34888513 Msa0639220:CDS 25.0%
!!! CTTTTTTAGTAAGTCAATTG+TGG - chr4_3:34888582-34888601 None:intergenic 25.0%
!! ATTGACTTACTAAAAAAGCT+AGG + chr4_3:34888584-34888603 Msa0639220:CDS 25.0%
! TGCTTTGGTTAAATTATTAC+CGG + chr4_3:34888922-34888941 Msa0639220:CDS 25.0%
! GAGATAAAATGGTAAAAGAA+TGG + chr4_3:34889221-34889240 Msa0639220:CDS 25.0%
! GGATTGAATTTGAATGGTTT+TGG - chr4_3:34888092-34888111 None:intergenic 30.0%
! CATTTGGGATTGAATTTGAA+TGG - chr4_3:34888098-34888117 None:intergenic 30.0%
!! ATTTTTGGAGGTTTAAGGAT+TGG - chr4_3:34888367-34888386 None:intergenic 30.0%
!! GTAGAATTTTTGGAGGTTTA+AGG - chr4_3:34888372-34888391 None:intergenic 30.0%
GATGAGTAATTTATCGAAGA+TGG - chr4_3:34888495-34888514 None:intergenic 30.0%
GGTAATAATTTAACCAAAGC+AGG - chr4_3:34888923-34888942 None:intergenic 30.0%
GCTTTGGTTAAATTATTACC+GGG + chr4_3:34888923-34888942 Msa0639220:CDS 30.0%
TTAAAAACAGAACTGGATCA+CGG - chr4_3:34889030-34889049 None:intergenic 30.0%
!!! GATCCAGTTCTGTTTTTAAA+CGG + chr4_3:34889031-34889050 Msa0639220:CDS 30.0%
!!! AGTTCTGTTTTTAAACGGTT+CGG + chr4_3:34889036-34889055 Msa0639220:CDS 30.0%
TTGGTTTCAGTATCATTGAT+TGG + chr4_3:34889130-34889149 Msa0639220:CDS 30.0%
! TGGTTTCAGTATCATTGATT+GGG + chr4_3:34889131-34889150 Msa0639220:CDS 30.0%
! ATCATTGATTGGGTTATTTG+AGG + chr4_3:34889141-34889160 Msa0639220:CDS 30.0%
!! TAAAAGAATGGAAGCATTTG+AGG + chr4_3:34889233-34889252 Msa0639220:CDS 30.0%
! TTTTTCTTCAAATTCGTAGG+TGG - chr4_3:34889295-34889314 None:intergenic 30.0%
TTAAATGATAGAGCCTTCAT+TGG + chr4_3:34889415-34889434 Msa0639220:CDS 30.0%
! GGATTGAATTTGAATGGTTT+TGG - chr4_3:34888092-34888111 None:intergenic 30.0%
! CATTTGGGATTGAATTTGAA+TGG - chr4_3:34888098-34888117 None:intergenic 30.0%
!! ATTTTTGGAGGTTTAAGGAT+TGG - chr4_3:34888367-34888386 None:intergenic 30.0%
!! GTAGAATTTTTGGAGGTTTA+AGG - chr4_3:34888372-34888391 None:intergenic 30.0%
GATGAGTAATTTATCGAAGA+TGG - chr4_3:34888495-34888514 None:intergenic 30.0%
GGTAATAATTTAACCAAAGC+AGG - chr4_3:34888923-34888942 None:intergenic 30.0%
GCTTTGGTTAAATTATTACC+GGG + chr4_3:34888923-34888942 Msa0639220:CDS 30.0%
TTAAAAACAGAACTGGATCA+CGG - chr4_3:34889030-34889049 None:intergenic 30.0%
!!! GATCCAGTTCTGTTTTTAAA+CGG + chr4_3:34889031-34889050 Msa0639220:CDS 30.0%
!!! AGTTCTGTTTTTAAACGGTT+CGG + chr4_3:34889036-34889055 Msa0639220:CDS 30.0%
TTGGTTTCAGTATCATTGAT+TGG + chr4_3:34889130-34889149 Msa0639220:CDS 30.0%
! TGGTTTCAGTATCATTGATT+GGG + chr4_3:34889131-34889150 Msa0639220:CDS 30.0%
! ATCATTGATTGGGTTATTTG+AGG + chr4_3:34889141-34889160 Msa0639220:CDS 30.0%
!! TAAAAGAATGGAAGCATTTG+AGG + chr4_3:34889233-34889252 Msa0639220:CDS 30.0%
! TTTTTCTTCAAATTCGTAGG+TGG - chr4_3:34889295-34889314 None:intergenic 30.0%
TTAAATGATAGAGCCTTCAT+TGG + chr4_3:34889415-34889434 Msa0639220:CDS 30.0%
!!! ATTATAATGACGCCGGTTTT+GGG - chr4_3:34888155-34888174 None:intergenic 35.0%
AAAACCGGCGTCATTATAAT+CGG + chr4_3:34888155-34888174 Msa0639220:CDS 35.0%
!!! GATGTTTTTGGAGTTGAGAT+GGG - chr4_3:34888210-34888229 None:intergenic 35.0%
!! TTTTTGAGCTTCTGGATAAG+CGG - chr4_3:34888333-34888352 None:intergenic 35.0%
! GGTTTAAGGATTGGTAATTG+AGG - chr4_3:34888358-34888377 None:intergenic 35.0%
AACCTCCAAAAATTCTACTC+AGG + chr4_3:34888374-34888393 Msa0639220:CDS 35.0%
! TAGCACCTGAGTAGAATTTT+TGG - chr4_3:34888382-34888401 None:intergenic 35.0%
GGTGCTAAAATCTTCTACAA+CGG + chr4_3:34888395-34888414 Msa0639220:CDS 35.0%
AAATCCCTAACTAACCCTAT+CGG + chr4_3:34888467-34888486 Msa0639220:CDS 35.0%
AAGAAGATTCCGCCAAAAAA+CGG - chr4_3:34888644-34888663 None:intergenic 35.0%
!! TCTAGAAGTTGTTTCGAGTT+CGG - chr4_3:34888672-34888691 None:intergenic 35.0%
TTCAGCAAGATTGAATCTGA+CGG - chr4_3:34888791-34888810 None:intergenic 35.0%
AAACCCGGTTTACAAAAAAC+CGG + chr4_3:34888952-34888971 Msa0639220:CDS 35.0%
! TTTATATTTTACCGCGAACC+CGG + chr4_3:34888991-34889010 Msa0639220:CDS 35.0%
GAACCGTTTAAAAACAGAAC+TGG - chr4_3:34889037-34889056 None:intergenic 35.0%
!!! GTTCTGTTTTTAAACGGTTC+GGG + chr4_3:34889037-34889056 Msa0639220:CDS 35.0%
!! TTTTTAAACGGTTCGGGTAA+AGG + chr4_3:34889043-34889062 Msa0639220:CDS 35.0%
! TGATGATGAGTTAGTGCTTA+AGG + chr4_3:34889171-34889190 Msa0639220:CDS 35.0%
TAAGGTGGTTCAAGAACTTT+CGG + chr4_3:34889189-34889208 Msa0639220:CDS 35.0%
! GGGTTTTTCTTCAAATTCGT+AGG - chr4_3:34889298-34889317 None:intergenic 35.0%
GAAAAACCCAACAATTGAAC+CGG + chr4_3:34889309-34889328 Msa0639220:CDS 35.0%
AAAAACCCAACAATTGAACC+GGG + chr4_3:34889310-34889329 Msa0639220:CDS 35.0%
ATAAACCCGGTTCAATTGTT+GGG - chr4_3:34889318-34889337 None:intergenic 35.0%
TATAAACCCGGTTCAATTGT+TGG - chr4_3:34889319-34889338 None:intergenic 35.0%
TCACCACACAAATATAAACC+CGG - chr4_3:34889331-34889350 None:intergenic 35.0%
!!! ATTATAATGACGCCGGTTTT+GGG - chr4_3:34888155-34888174 None:intergenic 35.0%
AAAACCGGCGTCATTATAAT+CGG + chr4_3:34888155-34888174 Msa0639220:CDS 35.0%
!!! GATGTTTTTGGAGTTGAGAT+GGG - chr4_3:34888210-34888229 None:intergenic 35.0%
!! TTTTTGAGCTTCTGGATAAG+CGG - chr4_3:34888333-34888352 None:intergenic 35.0%
! GGTTTAAGGATTGGTAATTG+AGG - chr4_3:34888358-34888377 None:intergenic 35.0%
AACCTCCAAAAATTCTACTC+AGG + chr4_3:34888374-34888393 Msa0639220:CDS 35.0%
! TAGCACCTGAGTAGAATTTT+TGG - chr4_3:34888382-34888401 None:intergenic 35.0%
GGTGCTAAAATCTTCTACAA+CGG + chr4_3:34888395-34888414 Msa0639220:CDS 35.0%
AAATCCCTAACTAACCCTAT+CGG + chr4_3:34888467-34888486 Msa0639220:CDS 35.0%
AAGAAGATTCCGCCAAAAAA+CGG - chr4_3:34888644-34888663 None:intergenic 35.0%
!! TCTAGAAGTTGTTTCGAGTT+CGG - chr4_3:34888672-34888691 None:intergenic 35.0%
TTCAGCAAGATTGAATCTGA+CGG - chr4_3:34888791-34888810 None:intergenic 35.0%
AAACCCGGTTTACAAAAAAC+CGG + chr4_3:34888952-34888971 Msa0639220:CDS 35.0%
! TTTATATTTTACCGCGAACC+CGG + chr4_3:34888991-34889010 Msa0639220:CDS 35.0%
GAACCGTTTAAAAACAGAAC+TGG - chr4_3:34889037-34889056 None:intergenic 35.0%
!!! GTTCTGTTTTTAAACGGTTC+GGG + chr4_3:34889037-34889056 Msa0639220:CDS 35.0%
!! TTTTTAAACGGTTCGGGTAA+AGG + chr4_3:34889043-34889062 Msa0639220:CDS 35.0%
! TGATGATGAGTTAGTGCTTA+AGG + chr4_3:34889171-34889190 Msa0639220:CDS 35.0%
TAAGGTGGTTCAAGAACTTT+CGG + chr4_3:34889189-34889208 Msa0639220:CDS 35.0%
! GGGTTTTTCTTCAAATTCGT+AGG - chr4_3:34889298-34889317 None:intergenic 35.0%
GAAAAACCCAACAATTGAAC+CGG + chr4_3:34889309-34889328 Msa0639220:CDS 35.0%
AAAAACCCAACAATTGAACC+GGG + chr4_3:34889310-34889329 Msa0639220:CDS 35.0%
ATAAACCCGGTTCAATTGTT+GGG - chr4_3:34889318-34889337 None:intergenic 35.0%
TATAAACCCGGTTCAATTGT+TGG - chr4_3:34889319-34889338 None:intergenic 35.0%
TCACCACACAAATATAAACC+CGG - chr4_3:34889331-34889350 None:intergenic 35.0%
AAGAAGTGAAGAAGATGGAG+CGG - chr4_3:34888067-34888086 None:intergenic 40.0%
TGGAGAAGAAGTGAAGAAGA+TGG - chr4_3:34888072-34888091 None:intergenic 40.0%
!!! TTATAATGACGCCGGTTTTG+GGG - chr4_3:34888154-34888173 None:intergenic 40.0%
!!! GATTATAATGACGCCGGTTT+TGG - chr4_3:34888156-34888175 None:intergenic 40.0%
!!! GGATGTTTTTGGAGTTGAGA+TGG - chr4_3:34888211-34888230 None:intergenic 40.0%
TGATGAAGATTTGGAAGCCA+CGG - chr4_3:34888310-34888329 None:intergenic 40.0%
GATAAGCGGTGATGAAGATT+TGG - chr4_3:34888319-34888338 None:intergenic 40.0%
!! TTGAGGAGTTTTTGAGCTTC+TGG - chr4_3:34888341-34888360 None:intergenic 40.0%
!! CACCTGAGTAGAATTTTTGG+AGG - chr4_3:34888379-34888398 None:intergenic 40.0%
! ATTTTGCGGAGTCGAAGAAA+TGG - chr4_3:34888451-34888470 None:intergenic 40.0%
!!! AGGGTTAGTTAGGGATTTTG+CGG - chr4_3:34888465-34888484 None:intergenic 40.0%
TATCGAAGATGGAACCGATA+GGG - chr4_3:34888484-34888503 None:intergenic 40.0%
TTATCGAAGATGGAACCGAT+AGG - chr4_3:34888485-34888504 None:intergenic 40.0%
! TTTGTTCGTCGGATTTTGTG+AGG - chr4_3:34888538-34888557 None:intergenic 40.0%
AATTGTGGGAACTTCTTCTG+CGG - chr4_3:34888567-34888586 None:intergenic 40.0%
!!! AGATTCTTCCGACCGTTTTT+TGG + chr4_3:34888629-34888648 Msa0639220:CDS 40.0%
!! CTAGAAGTTGTTTCGAGTTC+GGG - chr4_3:34888671-34888690 None:intergenic 40.0%
!!! GCAGTTTCCGTTGATTTTGA+CGG + chr4_3:34888818-34888837 Msa0639220:CDS 40.0%
ATTGGAGCCGTCAAAATCAA+CGG - chr4_3:34888828-34888847 None:intergenic 40.0%
AACCAAAGCAGGTTCTTCAA+CGG - chr4_3:34888912-34888931 None:intergenic 40.0%
ATTACCGGGAAAGAAAAACC+CGG + chr4_3:34888937-34888956 Msa0639220:CDS 40.0%
! TAAACCGGGTTTTTCTTTCC+CGG - chr4_3:34888944-34888963 None:intergenic 40.0%
!!! GAACCGGTTTTTTGTAAACC+GGG - chr4_3:34888958-34888977 None:intergenic 40.0%
!!! CGAACCGGTTTTTTGTAAAC+CGG - chr4_3:34888959-34888978 None:intergenic 40.0%
CGGTTTACAAAAAACCGGTT+CGG + chr4_3:34888957-34888976 Msa0639220:CDS 40.0%
!! TTGTTTGGTGGTGCATATGA+TGG - chr4_3:34889106-34889125 None:intergenic 40.0%
ATCATATGCACCACCAAACA+AGG + chr4_3:34889105-34889124 Msa0639220:CDS 40.0%
! ACTGAAACCAATGCCTTGTT+TGG - chr4_3:34889121-34889140 None:intergenic 40.0%
TGATGAGTTAGTGCTTAAGG+TGG + chr4_3:34889174-34889193 Msa0639220:CDS 40.0%
AAGGTGGTTCAAGAACTTTC+GGG + chr4_3:34889190-34889209 Msa0639220:CDS 40.0%
!! GGGTTGGTTTGGAGATAAAA+TGG + chr4_3:34889210-34889229 Msa0639220:CDS 40.0%
!! GGAAGCATTTGAGGACTTAT+AGG + chr4_3:34889242-34889261 Msa0639220:CDS 40.0%
GAACCGGGTTTATATTTGTG+TGG + chr4_3:34889325-34889344 Msa0639220:CDS 40.0%
TTGACCTCAGCTACATTTGA+TGG + chr4_3:34889355-34889374 Msa0639220:CDS 40.0%
AGCTACATTTGATGGAGCTT+TGG + chr4_3:34889363-34889382 Msa0639220:CDS 40.0%
! TTTGATGGAGCTTTGGTTTC+TGG + chr4_3:34889370-34889389 Msa0639220:CDS 40.0%
AAGAAGTGAAGAAGATGGAG+CGG - chr4_3:34888067-34888086 None:intergenic 40.0%
TGGAGAAGAAGTGAAGAAGA+TGG - chr4_3:34888072-34888091 None:intergenic 40.0%
!!! TTATAATGACGCCGGTTTTG+GGG - chr4_3:34888154-34888173 None:intergenic 40.0%
!!! GATTATAATGACGCCGGTTT+TGG - chr4_3:34888156-34888175 None:intergenic 40.0%
!!! GGATGTTTTTGGAGTTGAGA+TGG - chr4_3:34888211-34888230 None:intergenic 40.0%
TGATGAAGATTTGGAAGCCA+CGG - chr4_3:34888310-34888329 None:intergenic 40.0%
GATAAGCGGTGATGAAGATT+TGG - chr4_3:34888319-34888338 None:intergenic 40.0%
!! TTGAGGAGTTTTTGAGCTTC+TGG - chr4_3:34888341-34888360 None:intergenic 40.0%
!! CACCTGAGTAGAATTTTTGG+AGG - chr4_3:34888379-34888398 None:intergenic 40.0%
! ATTTTGCGGAGTCGAAGAAA+TGG - chr4_3:34888451-34888470 None:intergenic 40.0%
!!! AGGGTTAGTTAGGGATTTTG+CGG - chr4_3:34888465-34888484 None:intergenic 40.0%
TATCGAAGATGGAACCGATA+GGG - chr4_3:34888484-34888503 None:intergenic 40.0%
TTATCGAAGATGGAACCGAT+AGG - chr4_3:34888485-34888504 None:intergenic 40.0%
! TTTGTTCGTCGGATTTTGTG+AGG - chr4_3:34888538-34888557 None:intergenic 40.0%
AATTGTGGGAACTTCTTCTG+CGG - chr4_3:34888567-34888586 None:intergenic 40.0%
!!! AGATTCTTCCGACCGTTTTT+TGG + chr4_3:34888629-34888648 Msa0639220:CDS 40.0%
!! CTAGAAGTTGTTTCGAGTTC+GGG - chr4_3:34888671-34888690 None:intergenic 40.0%
!!! GCAGTTTCCGTTGATTTTGA+CGG + chr4_3:34888818-34888837 Msa0639220:CDS 40.0%
ATTGGAGCCGTCAAAATCAA+CGG - chr4_3:34888828-34888847 None:intergenic 40.0%
AACCAAAGCAGGTTCTTCAA+CGG - chr4_3:34888912-34888931 None:intergenic 40.0%
ATTACCGGGAAAGAAAAACC+CGG + chr4_3:34888937-34888956 Msa0639220:CDS 40.0%
! TAAACCGGGTTTTTCTTTCC+CGG - chr4_3:34888944-34888963 None:intergenic 40.0%
!!! GAACCGGTTTTTTGTAAACC+GGG - chr4_3:34888958-34888977 None:intergenic 40.0%
!!! CGAACCGGTTTTTTGTAAAC+CGG - chr4_3:34888959-34888978 None:intergenic 40.0%
CGGTTTACAAAAAACCGGTT+CGG + chr4_3:34888957-34888976 Msa0639220:CDS 40.0%
!! TTGTTTGGTGGTGCATATGA+TGG - chr4_3:34889106-34889125 None:intergenic 40.0%
ATCATATGCACCACCAAACA+AGG + chr4_3:34889105-34889124 Msa0639220:CDS 40.0%
! ACTGAAACCAATGCCTTGTT+TGG - chr4_3:34889121-34889140 None:intergenic 40.0%
TGATGAGTTAGTGCTTAAGG+TGG + chr4_3:34889174-34889193 Msa0639220:CDS 40.0%
AAGGTGGTTCAAGAACTTTC+GGG + chr4_3:34889190-34889209 Msa0639220:CDS 40.0%
!! GGGTTGGTTTGGAGATAAAA+TGG + chr4_3:34889210-34889229 Msa0639220:CDS 40.0%
!! GGAAGCATTTGAGGACTTAT+AGG + chr4_3:34889242-34889261 Msa0639220:CDS 40.0%
GAACCGGGTTTATATTTGTG+TGG + chr4_3:34889325-34889344 Msa0639220:CDS 40.0%
TTGACCTCAGCTACATTTGA+TGG + chr4_3:34889355-34889374 Msa0639220:CDS 40.0%
AGCTACATTTGATGGAGCTT+TGG + chr4_3:34889363-34889382 Msa0639220:CDS 40.0%
! TTTGATGGAGCTTTGGTTTC+TGG + chr4_3:34889370-34889389 Msa0639220:CDS 40.0%
! GAGGAGGAAAGGGATGTTTT+TGG - chr4_3:34888222-34888241 None:intergenic 45.0%
ATGATTCGAGGAGGAGGAAA+GGG - chr4_3:34888232-34888251 None:intergenic 45.0%
!! GGAACCGATAGGGTTAGTTA+GGG - chr4_3:34888474-34888493 None:intergenic 45.0%
!! TGGAACCGATAGGGTTAGTT+AGG - chr4_3:34888475-34888494 None:intergenic 45.0%
!!! TTTTGTGAGGACACCGATTC+TGG - chr4_3:34888525-34888544 None:intergenic 45.0%
! TGCGGTAAGAGTTTGTTCGT+CGG - chr4_3:34888549-34888568 None:intergenic 45.0%
!!! TTCTTCCGACCGTTTTTTGG+CGG + chr4_3:34888632-34888651 Msa0639220:CDS 45.0%
AGATTCCGCCAAAAAACGGT+CGG - chr4_3:34888640-34888659 None:intergenic 45.0%
ATCTTCAAGTGTCTCGCTCT+CGG + chr4_3:34888704-34888723 Msa0639220:CDS 45.0%
TCTCGGCGAAAATACTCTTC+CGG + chr4_3:34888721-34888740 Msa0639220:CDS 45.0%
GAAAATACTCTTCCGGCGAA+CGG + chr4_3:34888728-34888747 Msa0639220:CDS 45.0%
AGCGATTCCAGAACAGTTAG+CGG + chr4_3:34888757-34888776 Msa0639220:CDS 45.0%
!! GACGTTTTGAGTAGCGAGTT+AGG + chr4_3:34888875-34888894 Msa0639220:CDS 45.0%
!! CAAAAAACCGGTTCGGAGTA+CGG + chr4_3:34888964-34888983 Msa0639220:CDS 45.0%
AAACAAACCGTACTCCGAAC+CGG - chr4_3:34888974-34888993 None:intergenic 45.0%
!! GAAACCAATGCCTTGTTTGG+TGG - chr4_3:34889118-34889137 None:intergenic 45.0%
! TGGTTCAAGAACTTTCGGGT+TGG + chr4_3:34889194-34889213 Msa0639220:CDS 45.0%
!! CAAGAACTTTCGGGTTGGTT+TGG + chr4_3:34889199-34889218 Msa0639220:CDS 45.0%
! TTCGTAGGTGGACACTGATT+AGG - chr4_3:34889283-34889302 None:intergenic 45.0%
AGCTCCATCAAATGTAGCTG+AGG - chr4_3:34889362-34889381 None:intergenic 45.0%
!! ATGGAGCTTTGGTTTCTGGT+AGG + chr4_3:34889374-34889393 Msa0639220:CDS 45.0%
! GAGGAGGAAAGGGATGTTTT+TGG - chr4_3:34888222-34888241 None:intergenic 45.0%
ATGATTCGAGGAGGAGGAAA+GGG - chr4_3:34888232-34888251 None:intergenic 45.0%
!! GGAACCGATAGGGTTAGTTA+GGG - chr4_3:34888474-34888493 None:intergenic 45.0%
!! TGGAACCGATAGGGTTAGTT+AGG - chr4_3:34888475-34888494 None:intergenic 45.0%
!!! TTTTGTGAGGACACCGATTC+TGG - chr4_3:34888525-34888544 None:intergenic 45.0%
! TGCGGTAAGAGTTTGTTCGT+CGG - chr4_3:34888549-34888568 None:intergenic 45.0%
!!! TTCTTCCGACCGTTTTTTGG+CGG + chr4_3:34888632-34888651 Msa0639220:CDS 45.0%
AGATTCCGCCAAAAAACGGT+CGG - chr4_3:34888640-34888659 None:intergenic 45.0%
ATCTTCAAGTGTCTCGCTCT+CGG + chr4_3:34888704-34888723 Msa0639220:CDS 45.0%
TCTCGGCGAAAATACTCTTC+CGG + chr4_3:34888721-34888740 Msa0639220:CDS 45.0%
GAAAATACTCTTCCGGCGAA+CGG + chr4_3:34888728-34888747 Msa0639220:CDS 45.0%
AGCGATTCCAGAACAGTTAG+CGG + chr4_3:34888757-34888776 Msa0639220:CDS 45.0%
!! GACGTTTTGAGTAGCGAGTT+AGG + chr4_3:34888875-34888894 Msa0639220:CDS 45.0%
!! CAAAAAACCGGTTCGGAGTA+CGG + chr4_3:34888964-34888983 Msa0639220:CDS 45.0%
AAACAAACCGTACTCCGAAC+CGG - chr4_3:34888974-34888993 None:intergenic 45.0%
!! GAAACCAATGCCTTGTTTGG+TGG - chr4_3:34889118-34889137 None:intergenic 45.0%
! TGGTTCAAGAACTTTCGGGT+TGG + chr4_3:34889194-34889213 Msa0639220:CDS 45.0%
!! CAAGAACTTTCGGGTTGGTT+TGG + chr4_3:34889199-34889218 Msa0639220:CDS 45.0%
! TTCGTAGGTGGACACTGATT+AGG - chr4_3:34889283-34889302 None:intergenic 45.0%
AGCTCCATCAAATGTAGCTG+AGG - chr4_3:34889362-34889381 None:intergenic 45.0%
!! ATGGAGCTTTGGTTTCTGGT+AGG + chr4_3:34889374-34889393 Msa0639220:CDS 45.0%
AGATGGAGCGGTTTGTGGAA+GGG - chr4_3:34888055-34888074 None:intergenic 50.0%
AAGATGGAGCGGTTTGTGGA+AGG - chr4_3:34888056-34888075 None:intergenic 50.0%
GAAGAAGATGGAGCGGTTTG+TGG - chr4_3:34888060-34888079 None:intergenic 50.0%
!! GCAAGTTGGGAGGAGCATTT+GGG - chr4_3:34888113-34888132 None:intergenic 50.0%
GATGATTCGAGGAGGAGGAA+AGG - chr4_3:34888233-34888252 None:intergenic 50.0%
AGATTTGGAAGCCACGGTCA+AGG - chr4_3:34888304-34888323 None:intergenic 50.0%
GAGTCGAAGAAATGGCGAAG+TGG - chr4_3:34888443-34888462 None:intergenic 50.0%
CTCATCGGAACCACCAGAAT+CGG + chr4_3:34888509-34888528 Msa0639220:CDS 50.0%
TGCCGTTGAAGAACCTGCTT+TGG + chr4_3:34888907-34888926 Msa0639220:CDS 50.0%
AACAGAACTGGATCACGGAC+CGG - chr4_3:34889025-34889044 None:intergenic 50.0%
TGCACCACCAAACAAGGCAT+TGG + chr4_3:34889111-34889130 Msa0639220:CDS 50.0%
AGATGGAGCGGTTTGTGGAA+GGG - chr4_3:34888055-34888074 None:intergenic 50.0%
AAGATGGAGCGGTTTGTGGA+AGG - chr4_3:34888056-34888075 None:intergenic 50.0%
GAAGAAGATGGAGCGGTTTG+TGG - chr4_3:34888060-34888079 None:intergenic 50.0%
!! GCAAGTTGGGAGGAGCATTT+GGG - chr4_3:34888113-34888132 None:intergenic 50.0%
GATGATTCGAGGAGGAGGAA+AGG - chr4_3:34888233-34888252 None:intergenic 50.0%
AGATTTGGAAGCCACGGTCA+AGG - chr4_3:34888304-34888323 None:intergenic 50.0%
GAGTCGAAGAAATGGCGAAG+TGG - chr4_3:34888443-34888462 None:intergenic 50.0%
CTCATCGGAACCACCAGAAT+CGG + chr4_3:34888509-34888528 Msa0639220:CDS 50.0%
TGCCGTTGAAGAACCTGCTT+TGG + chr4_3:34888907-34888926 Msa0639220:CDS 50.0%
AACAGAACTGGATCACGGAC+CGG - chr4_3:34889025-34889044 None:intergenic 50.0%
TGCACCACCAAACAAGGCAT+TGG + chr4_3:34889111-34889130 Msa0639220:CDS 50.0%
!! GGCAAGTTGGGAGGAGCATT+TGG - chr4_3:34888114-34888133 None:intergenic 55.0%
!! GGCGCCGATTATAATGACGC+CGG - chr4_3:34888162-34888181 None:intergenic 55.0%
GGCGTCATTATAATCGGCGC+CGG + chr4_3:34888161-34888180 Msa0639220:CDS 55.0%
! ATGGGTTGCAGCAGCTAAGC+CGG - chr4_3:34888192-34888211 None:intergenic 55.0%
CGTTGGATGATTCGAGGAGG+AGG - chr4_3:34888238-34888257 None:intergenic 55.0%
CTCGAATCATCCAACGCCGT+CGG + chr4_3:34888242-34888261 Msa0639220:CDS 55.0%
GAGGAAGCCGTCGACAATGT+CGG - chr4_3:34888282-34888301 None:intergenic 55.0%
TTTGGAAGCCACGGTCAAGG+AGG - chr4_3:34888301-34888320 None:intergenic 55.0%
GATCAGCGACGGTGTGGAAT+TGG - chr4_3:34888421-34888440 None:intergenic 55.0%
ATGGCGAAGTGGATCAGCGA+CGG - chr4_3:34888432-34888451 None:intergenic 55.0%
!! TGTGAGGACACCGATTCTGG+TGG - chr4_3:34888522-34888541 None:intergenic 55.0%
ATCGCTGAGATACCGTTCGC+CGG - chr4_3:34888743-34888762 None:intergenic 55.0%
TTCCAGAACAGTTAGCGGCG+AGG + chr4_3:34888762-34888781 Msa0639220:CDS 55.0%
AACCTCGCCGCTAACTGTTC+TGG - chr4_3:34888767-34888786 None:intergenic 55.0%
! CCGTTTTGCAACCTCACACG+CGG - chr4_3:34888854-34888873 None:intergenic 55.0%
CCGCGTGTGAGGTTGCAAAA+CGG + chr4_3:34888851-34888870 Msa0639220:CDS 55.0%
TCACGGACCGGGATTTGATC+CGG - chr4_3:34889013-34889032 None:intergenic 55.0%
ACAGAACTGGATCACGGACC+GGG - chr4_3:34889024-34889043 None:intergenic 55.0%
!! GGCAAGTTGGGAGGAGCATT+TGG - chr4_3:34888114-34888133 None:intergenic 55.0%
!! GGCGCCGATTATAATGACGC+CGG - chr4_3:34888162-34888181 None:intergenic 55.0%
GGCGTCATTATAATCGGCGC+CGG + chr4_3:34888161-34888180 Msa0639220:CDS 55.0%
! ATGGGTTGCAGCAGCTAAGC+CGG - chr4_3:34888192-34888211 None:intergenic 55.0%
CGTTGGATGATTCGAGGAGG+AGG - chr4_3:34888238-34888257 None:intergenic 55.0%
CTCGAATCATCCAACGCCGT+CGG + chr4_3:34888242-34888261 Msa0639220:CDS 55.0%
GAGGAAGCCGTCGACAATGT+CGG - chr4_3:34888282-34888301 None:intergenic 55.0%
TTTGGAAGCCACGGTCAAGG+AGG - chr4_3:34888301-34888320 None:intergenic 55.0%
GATCAGCGACGGTGTGGAAT+TGG - chr4_3:34888421-34888440 None:intergenic 55.0%
ATGGCGAAGTGGATCAGCGA+CGG - chr4_3:34888432-34888451 None:intergenic 55.0%
!! TGTGAGGACACCGATTCTGG+TGG - chr4_3:34888522-34888541 None:intergenic 55.0%
ATCGCTGAGATACCGTTCGC+CGG - chr4_3:34888743-34888762 None:intergenic 55.0%
TTCCAGAACAGTTAGCGGCG+AGG + chr4_3:34888762-34888781 Msa0639220:CDS 55.0%
AACCTCGCCGCTAACTGTTC+TGG - chr4_3:34888767-34888786 None:intergenic 55.0%
! CCGTTTTGCAACCTCACACG+CGG - chr4_3:34888854-34888873 None:intergenic 55.0%
CCGCGTGTGAGGTTGCAAAA+CGG + chr4_3:34888851-34888870 Msa0639220:CDS 55.0%
TCACGGACCGGGATTTGATC+CGG - chr4_3:34889013-34889032 None:intergenic 55.0%
ACAGAACTGGATCACGGACC+GGG - chr4_3:34889024-34889043 None:intergenic 55.0%
GGAGCGGTTTGTGGAAGGGA+GGG - chr4_3:34888051-34888070 None:intergenic 60.0%
TGGAGCGGTTTGTGGAAGGG+AGG - chr4_3:34888052-34888071 None:intergenic 60.0%
!!! GGTTTTGGGGAGTGAGGAGG+GGG - chr4_3:34888141-34888160 None:intergenic 60.0%
!!! CGGTTTTGGGGAGTGAGGAG+GGG - chr4_3:34888142-34888161 None:intergenic 60.0%
!!! CCGGTTTTGGGGAGTGAGGA+GGG - chr4_3:34888143-34888162 None:intergenic 60.0%
CCCTCCTCACTCCCCAAAAC+CGG + chr4_3:34888140-34888159 Msa0639220:CDS 60.0%
! CGGCGTTGGATGATTCGAGG+AGG - chr4_3:34888241-34888260 None:intergenic 60.0%
! CGACGGCGTTGGATGATTCG+AGG - chr4_3:34888244-34888263 None:intergenic 60.0%
GAATCATCCAACGCCGTCGG+TGG + chr4_3:34888245-34888264 Msa0639220:CDS 60.0%
! GTCCGCACCGACATTGTCGA+CGG + chr4_3:34888272-34888291 Msa0639220:CDS 60.0%
AGCCGTCGACAATGTCGGTG+CGG - chr4_3:34888277-34888296 None:intergenic 60.0%
GAAGTGGATCAGCGACGGTG+TGG - chr4_3:34888427-34888446 None:intergenic 60.0%
CAACCTCACACGCGGCGAAT+TGG - chr4_3:34888846-34888865 None:intergenic 60.0%
CGGGATTTGATCCGGGTTCG+CGG - chr4_3:34889005-34889024 None:intergenic 60.0%
CGCGAACCCGGATCAAATCC+CGG + chr4_3:34889003-34889022 Msa0639220:CDS 60.0%
CACGGACCGGGATTTGATCC+GGG - chr4_3:34889012-34889031 None:intergenic 60.0%
GGAGCGGTTTGTGGAAGGGA+GGG - chr4_3:34888051-34888070 None:intergenic 60.0%
TGGAGCGGTTTGTGGAAGGG+AGG - chr4_3:34888052-34888071 None:intergenic 60.0%
!!! GGTTTTGGGGAGTGAGGAGG+GGG - chr4_3:34888141-34888160 None:intergenic 60.0%
!!! CGGTTTTGGGGAGTGAGGAG+GGG - chr4_3:34888142-34888161 None:intergenic 60.0%
!!! CCGGTTTTGGGGAGTGAGGA+GGG - chr4_3:34888143-34888162 None:intergenic 60.0%
CCCTCCTCACTCCCCAAAAC+CGG + chr4_3:34888140-34888159 Msa0639220:CDS 60.0%
! CGGCGTTGGATGATTCGAGG+AGG - chr4_3:34888241-34888260 None:intergenic 60.0%
! CGACGGCGTTGGATGATTCG+AGG - chr4_3:34888244-34888263 None:intergenic 60.0%
GAATCATCCAACGCCGTCGG+TGG + chr4_3:34888245-34888264 Msa0639220:CDS 60.0%
! GTCCGCACCGACATTGTCGA+CGG + chr4_3:34888272-34888291 Msa0639220:CDS 60.0%
AGCCGTCGACAATGTCGGTG+CGG - chr4_3:34888277-34888296 None:intergenic 60.0%
GAAGTGGATCAGCGACGGTG+TGG - chr4_3:34888427-34888446 None:intergenic 60.0%
CAACCTCACACGCGGCGAAT+TGG - chr4_3:34888846-34888865 None:intergenic 60.0%
CGGGATTTGATCCGGGTTCG+CGG - chr4_3:34889005-34889024 None:intergenic 60.0%
CGCGAACCCGGATCAAATCC+CGG + chr4_3:34889003-34889022 Msa0639220:CDS 60.0%
CACGGACCGGGATTTGATCC+GGG - chr4_3:34889012-34889031 None:intergenic 60.0%
TTGGGGAGTGAGGAGGGGGT+GGG - chr4_3:34888137-34888156 None:intergenic 65.0%
TTTGGGGAGTGAGGAGGGGG+TGG - chr4_3:34888138-34888157 None:intergenic 65.0%
!!! GCCGGTTTTGGGGAGTGAGG+AGG - chr4_3:34888144-34888163 None:intergenic 65.0%
!!! GACGCCGGTTTTGGGGAGTG+AGG - chr4_3:34888147-34888166 None:intergenic 65.0%
TTGCAGCAGCTAAGCCGGCG+AGG - chr4_3:34888187-34888206 None:intergenic 65.0%
GACGGCTTCCTCCTTGACCG+TGG + chr4_3:34888290-34888309 Msa0639220:CDS 65.0%
GCTCCAATTCGCCGCGTGTG+AGG + chr4_3:34888840-34888859 Msa0639220:CDS 65.0%
TTGGGGAGTGAGGAGGGGGT+GGG - chr4_3:34888137-34888156 None:intergenic 65.0%
TTTGGGGAGTGAGGAGGGGG+TGG - chr4_3:34888138-34888157 None:intergenic 65.0%
!!! GCCGGTTTTGGGGAGTGAGG+AGG - chr4_3:34888144-34888163 None:intergenic 65.0%
!!! GACGCCGGTTTTGGGGAGTG+AGG - chr4_3:34888147-34888166 None:intergenic 65.0%
TTGCAGCAGCTAAGCCGGCG+AGG - chr4_3:34888187-34888206 None:intergenic 65.0%
GACGGCTTCCTCCTTGACCG+TGG + chr4_3:34888290-34888309 Msa0639220:CDS 65.0%
GCTCCAATTCGCCGCGTGTG+AGG + chr4_3:34888840-34888859 Msa0639220:CDS 65.0%
GGAGGGGGTGGGGGCAAGTT+GGG - chr4_3:34888126-34888145 None:intergenic 70.0%
AGGAGGGGGTGGGGGCAAGT+TGG - chr4_3:34888127-34888146 None:intergenic 70.0%
TGGGGAGTGAGGAGGGGGTG+GGG - chr4_3:34888136-34888155 None:intergenic 70.0%
!! ATAATCGGCGCCGGCCTCGC+CGG + chr4_3:34888170-34888189 Msa0639220:CDS 70.0%
AGCAGCTAAGCCGGCGAGGC+CGG - chr4_3:34888183-34888202 None:intergenic 70.0%
GGAGGGGGTGGGGGCAAGTT+GGG - chr4_3:34888126-34888145 None:intergenic 70.0%
AGGAGGGGGTGGGGGCAAGT+TGG - chr4_3:34888127-34888146 None:intergenic 70.0%
TGGGGAGTGAGGAGGGGGTG+GGG - chr4_3:34888136-34888155 None:intergenic 70.0%
!! ATAATCGGCGCCGGCCTCGC+CGG + chr4_3:34888170-34888189 Msa0639220:CDS 70.0%
AGCAGCTAAGCCGGCGAGGC+CGG - chr4_3:34888183-34888202 None:intergenic 70.0%
! GGGGGTGGGGGCAAGTTGGG+AGG - chr4_3:34888123-34888142 None:intergenic 75.0%
GGGGAGTGAGGAGGGGGTGG+GGG - chr4_3:34888135-34888154 None:intergenic 75.0%
GACGCGACCACCGACGGCGT+TGG - chr4_3:34888255-34888274 None:intergenic 75.0%
GGTGCGGACGCGACCACCGA+CGG - chr4_3:34888261-34888280 None:intergenic 75.0%
! GGGGGTGGGGGCAAGTTGGG+AGG - chr4_3:34888123-34888142 None:intergenic 75.0%
GGGGAGTGAGGAGGGGGTGG+GGG - chr4_3:34888135-34888154 None:intergenic 75.0%
GACGCGACCACCGACGGCGT+TGG - chr4_3:34888255-34888274 None:intergenic 75.0%
GGTGCGGACGCGACCACCGA+CGG - chr4_3:34888261-34888280 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 34888029 34889441 34888029 ID=Msa0639220;Name=Msa0639220
chr4_3 mRNA 34888029 34889441 34888029 ID=Msa0639220-mRNA-1;Parent=Msa0639220;Name=Msa0639220-mRNA-1;_AED=0.39;_eAED=0.39;_QI=0|-1|0|1|-1|1|1|0|470
chr4_3 exon 34888029 34889441 34888029 ID=Msa0639220-mRNA-1:exon:8200;Parent=Msa0639220-mRNA-1
chr4_3 CDS 34888029 34889441 34888029 ID=Msa0639220-mRNA-1:cds;Parent=Msa0639220-mRNA-1
Gene Sequence

>Msa0639220

ATGACTATGATCACACTTTCCCTCCCTTCCACAAACCGCTCCATCTTCTTCACTTCTTCTCCAAAACCATTCAAATTCAATCCCAAATGCTCCTCCCAACTTGCCCCCACCCCCTCCTCACTCCCCAAAACCGGCGTCATTATAATCGGCGCCGGCCTCGCCGGCTTAGCTGCTGCAACCCATCTCAACTCCAAAAACATCCCTTTCCTCCTCCTCGAATCATCCAACGCCGTCGGTGGTCGCGTCCGCACCGACATTGTCGACGGCTTCCTCCTTGACCGTGGCTTCCAAATCTTCATCACCGCTTATCCAGAAGCTCAAAAACTCCTCAATTACCAATCCTTAAACCTCCAAAAATTCTACTCAGGTGCTAAAATCTTCTACAACGGCCAATTCCACACCGTCGCTGATCCACTTCGCCATTTCTTCGACTCCGCAAAATCCCTAACTAACCCTATCGGTTCCATCTTCGATAAATTACTCATCGGAACCACCAGAATCGGTGTCCTCACAAAATCCGACGAACAAACTCTTACCGCAGAAGAAGTTCCCACAATTGACTTACTAAAAAAGCTAGGATTTTCAGATTCAATCATTAGAAGATTCTTCCGACCGTTTTTTGGCGGAATCTTCTTCGATCCCGAACTCGAAACAACTTCTAGATTATTCGATTTCATCTTCAAGTGTCTCGCTCTCGGCGAAAATACTCTTCCGGCGAACGGTATCTCAGCGATTCCAGAACAGTTAGCGGCGAGGTTACCGTCAGATTCAATCTTGCTGAATACTAAAGCAGTTTCCGTTGATTTTGACGGCTCCAATTCGCCGCGTGTGAGGTTGCAAAACGGTGACGTTTTGAGTAGCGAGTTAGGAGTGATCGTTGCCGTTGAAGAACCTGCTTTGGTTAAATTATTACCGGGAAAGAAAAACCCGGTTTACAAAAAACCGGTTCGGAGTACGGTTTGTTTATATTTTACCGCGAACCCGGATCAAATCCCGGTCCGTGATCCAGTTCTGTTTTTAAACGGTTCGGGTAAAGGAATAGTGAATAACATGTTTTTTGTGACAAATGTAGCACCATCATATGCACCACCAAACAAGGCATTGGTTTCAGTATCATTGATTGGGTTATTTGAGGATGTATCTGATGATGAGTTAGTGCTTAAGGTGGTTCAAGAACTTTCGGGTTGGTTTGGAGATAAAATGGTAAAAGAATGGAAGCATTTGAGGACTTATAGGATTGAGTATGCACAACCTAATCAGTGTCCACCTACGAATTTGAAGAAAAACCCAACAATTGAACCGGGTTTATATTTGTGTGGTGATTATTTGACCTCAGCTACATTTGATGGAGCTTTGGTTTCTGGTAGGAGAGCAGCTGAATCACTGTTAAATGATAGAGCCTTCATTGGCTAA

Protein sequence

>Msa0639220

MTMITLSLPSTNRSIFFTSSPKPFKFNPKCSSQLAPTPSSLPKTGVIIIGAGLAGLAAATHLNSKNIPFLLLESSNAVGGRVRTDIVDGFLLDRGFQIFITAYPEAQKLLNYQSLNLQKFYSGAKIFYNGQFHTVADPLRHFFDSAKSLTNPIGSIFDKLLIGTTRIGVLTKSDEQTLTAEEVPTIDLLKKLGFSDSIIRRFFRPFFGGIFFDPELETTSRLFDFIFKCLALGENTLPANGISAIPEQLAARLPSDSILLNTKAVSVDFDGSNSPRVRLQNGDVLSSELGVIVAVEEPALVKLLPGKKNPVYKKPVRSTVCLYFTANPDQIPVRDPVLFLNGSGKGIVNNMFFVTNVAPSYAPPNKALVSVSLIGLFEDVSDDELVLKVVQELSGWFGDKMVKEWKHLRTYRIEYAQPNQCPPTNLKKNPTIEPGLYLCGDYLTSATFDGALVSGRRAAESLLNDRAFIG*