Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257570 | XP_003608721.1 | 97.107 | 242 | 7 | 0 | 1 | 242 | 1 | 242 | 3.58e-172 | 483 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257570 | sp|Q9SHC8|VAP12_ARATH | 66.527 | 239 | 77 | 2 | 5 | 242 | 3 | 239 | 2.50e-107 | 312 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257570 | G7JIX5 | 97.107 | 242 | 7 | 0 | 1 | 242 | 1 | 242 | 1.71e-172 | 483 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017300 | Msa1257570 | -0.804925 | 1.709167e-49 | -8.615850e-47 |
| Msa0029380 | Msa1257570 | 0.801306 | 9.581013e-49 | -8.615850e-47 |
| Msa0037180 | Msa1257570 | 0.857300 | 1.793297e-62 | -8.615850e-47 |
| Msa0040860 | Msa1257570 | -0.819306 | 1.244890e-52 | -8.615850e-47 |
| Msa0077560 | Msa1257570 | 0.805632 | 1.215699e-49 | -8.615850e-47 |
| Msa0092220 | Msa1257570 | 0.832811 | 7.639489e-56 | -8.615850e-47 |
| Msa0610700 | Msa1257570 | -0.836978 | 6.813823e-57 | -8.615850e-47 |
| Msa0630770 | Msa1257570 | -0.811055 | 8.476984e-51 | -8.615850e-47 |
| Msa0683840 | Msa1257570 | 0.855623 | 5.570305e-62 | -8.615850e-47 |
| Msa0693340 | Msa1257570 | -0.821142 | 4.724871e-53 | -8.615850e-47 |
| Msa0703950 | Msa1257570 | 0.819418 | 1.173916e-52 | -8.615850e-47 |
| Msa0745140 | Msa1257570 | 0.855891 | 4.652381e-62 | -8.615850e-47 |
| Msa0746650 | Msa1257570 | 0.810278 | 1.248079e-50 | -8.615850e-47 |
| Msa0754430 | Msa1257570 | 0.816153 | 6.405523e-52 | -8.615850e-47 |
| Msa0754450 | Msa1257570 | 0.831788 | 1.368656e-55 | -8.615850e-47 |
| Msa0776640 | Msa1257570 | 0.856979 | 2.230668e-62 | -8.615850e-47 |
| Msa0793230 | Msa1257570 | 0.802010 | 6.872844e-49 | -8.615850e-47 |
| Msa0813160 | Msa1257570 | 0.800203 | 1.608667e-48 | -8.615850e-47 |
| Msa0825920 | Msa1257570 | 0.854169 | 1.472398e-61 | -8.615850e-47 |
| Msa0124910 | Msa1257570 | 0.835927 | 1.261879e-56 | -8.615850e-47 |
| Msa0142430 | Msa1257570 | 0.817465 | 3.251809e-52 | -8.615850e-47 |
| Msa0143590 | Msa1257570 | 0.830386 | 3.023254e-55 | -8.615850e-47 |
| Msa0169410 | Msa1257570 | 0.825045 | 5.807505e-54 | -8.615850e-47 |
| Msa0177320 | Msa1257570 | 0.872568 | 2.877503e-67 | -8.615850e-47 |
| Msa0187210 | Msa1257570 | 0.808027 | 3.788596e-50 | -8.615850e-47 |
| Msa0204950 | Msa1257570 | 0.803518 | 3.354711e-49 | -8.615850e-47 |
| Msa0209140 | Msa1257570 | 0.810277 | 1.248457e-50 | -8.615850e-47 |
| Msa0216340 | Msa1257570 | 0.842754 | 2.131242e-58 | -8.615850e-47 |
| Msa0220990 | Msa1257570 | 0.804009 | 2.653322e-49 | -8.615850e-47 |
| Msa0226450 | Msa1257570 | -0.807262 | 5.509347e-50 | -8.615850e-47 |
| Msa1257570 | Msa1259730 | 0.806267 | 8.939546e-50 | -8.615850e-47 |
| Msa1257570 | Msa1265020 | 0.802074 | 6.666553e-49 | -8.615850e-47 |
| Msa1257570 | Msa1306250 | 0.815671 | 8.204052e-52 | -8.615850e-47 |
| Msa1257570 | Msa1331300 | 0.881862 | 1.686829e-70 | -8.615850e-47 |
| Msa1257570 | Msa1337850 | 0.813752 | 2.183430e-51 | -8.615850e-47 |
| Msa1257570 | Msa1347390 | 0.812215 | 4.741960e-51 | -8.615850e-47 |
| Msa1257570 | Msa1365820 | 0.858652 | 7.109873e-63 | -8.615850e-47 |
| Msa1257570 | Msa1368390 | 0.847393 | 1.189898e-59 | -8.615850e-47 |
| Msa1257570 | Msa1375130 | 0.804709 | 1.896064e-49 | -8.615850e-47 |
| Msa1257570 | Msa1383820 | 0.803629 | 3.181766e-49 | -8.615850e-47 |
| Msa1257570 | Msa1387440 | 0.801742 | 7.800025e-49 | -8.615850e-47 |
| Msa1257570 | Msa1391500 | 0.822297 | 2.554172e-53 | -8.615850e-47 |
| Msa1257570 | Msa1398810 | 0.860177 | 2.477902e-63 | -8.615850e-47 |
| Msa1257570 | Msa1407840 | 0.810866 | 9.314420e-51 | -8.615850e-47 |
| Msa1257570 | Msa1414500 | 0.805615 | 1.225258e-49 | -8.615850e-47 |
| Msa1257570 | Msa1429070 | 0.809837 | 1.553377e-50 | -8.615850e-47 |
| Msa1257570 | Msa1433870 | 0.826634 | 2.435834e-54 | -8.615850e-47 |
| Msa1257570 | Msa1437810 | 0.808995 | 2.355116e-50 | -8.615850e-47 |
| Msa1257570 | Msa1441960 | 0.813689 | 2.253596e-51 | -8.615850e-47 |
| Msa1257570 | Msa1454500 | 0.809376 | 1.950996e-50 | -8.615850e-47 |
| Msa1257570 | Msa1457770 | 0.854872 | 9.218124e-62 | -8.615850e-47 |
| Msa0386880 | Msa1257570 | 0.838612 | 2.593287e-57 | -8.615850e-47 |
| Msa0409830 | Msa1257570 | 0.801591 | 8.376484e-49 | -8.615850e-47 |
| Msa0414880 | Msa1257570 | 0.839238 | 1.786057e-57 | -8.615850e-47 |
| Msa0428210 | Msa1257570 | 0.838218 | 3.277358e-57 | -8.615850e-47 |
| Msa0430230 | Msa1257570 | 0.803870 | 2.836128e-49 | -8.615850e-47 |
| Msa0454560 | Msa1257570 | 0.804078 | 2.567631e-49 | -8.615850e-47 |
| Msa0474570 | Msa1257570 | 0.806386 | 8.435308e-50 | -8.615850e-47 |
| Msa0481310 | Msa1257570 | 0.804433 | 2.164905e-49 | -8.615850e-47 |
| Msa0982730 | Msa1257570 | 0.805801 | 1.120345e-49 | -8.615850e-47 |
| Msa1013190 | Msa1257570 | 0.827452 | 1.552500e-54 | -8.615850e-47 |
| Msa1031170 | Msa1257570 | 0.817016 | 4.103145e-52 | -8.615850e-47 |
| Msa1045280 | Msa1257570 | 0.804560 | 2.037276e-49 | -8.615850e-47 |
| Msa1074900 | Msa1257570 | 0.832195 | 1.085806e-55 | -8.615850e-47 |
| Msa1078830 | Msa1257570 | 0.876180 | 1.713430e-68 | -8.615850e-47 |
| Msa1078890 | Msa1257570 | 0.876845 | 1.009564e-68 | -8.615850e-47 |
| Msa0249850 | Msa1257570 | 0.829351 | 5.403796e-55 | -8.615850e-47 |
| Msa0256540 | Msa1257570 | 0.849814 | 2.539211e-60 | -8.615850e-47 |
| Msa0262440 | Msa1257570 | 0.822980 | 1.772047e-53 | -8.615850e-47 |
| Msa0263780 | Msa1257570 | 0.834089 | 3.665438e-56 | -8.615850e-47 |
| Msa0288620 | Msa1257570 | 0.828411 | 9.127803e-55 | -8.615850e-47 |
| Msa0300280 | Msa1257570 | 0.816988 | 4.162932e-52 | -8.615850e-47 |
| Msa0320600 | Msa1257570 | 0.804115 | 2.521540e-49 | -8.615850e-47 |
| Msa0326710 | Msa1257570 | 0.834689 | 2.591899e-56 | -8.615850e-47 |
| Msa0334320 | Msa1257570 | 0.810800 | 9.626261e-51 | -8.615850e-47 |
| Msa0339020 | Msa1257570 | 0.824992 | 5.975177e-54 | -8.615850e-47 |
| Msa0341060 | Msa1257570 | -0.812209 | 4.756986e-51 | -8.615850e-47 |
| Msa1119440 | Msa1257570 | 0.829348 | 5.413608e-55 | -8.615850e-47 |
| Msa1150960 | Msa1257570 | 0.805044 | 1.613935e-49 | -8.615850e-47 |
| Msa1158200 | Msa1257570 | 0.800508 | 1.394846e-48 | -8.615850e-47 |
| Msa1165090 | Msa1257570 | 0.841546 | 4.449185e-58 | -8.615850e-47 |
| Msa1169660 | Msa1257570 | 0.878810 | 2.077421e-69 | -8.615850e-47 |
| Msa1192180 | Msa1257570 | 0.831695 | 1.442820e-55 | -8.615850e-47 |
| Msa1207330 | Msa1257570 | 0.883275 | 5.150743e-71 | -8.615850e-47 |
| Msa1216980 | Msa1257570 | 0.803909 | 2.782946e-49 | -8.615850e-47 |
| Msa0502510 | Msa1257570 | 0.837831 | 4.120160e-57 | -8.615850e-47 |
| Msa0519150 | Msa1257570 | 0.840274 | 9.594838e-58 | -8.615850e-47 |
| Msa0525880 | Msa1257570 | 0.829873 | 4.035331e-55 | -8.615850e-47 |
| Msa0574900 | Msa1257570 | 0.819414 | 1.176106e-52 | -8.615850e-47 |
| Msa0579070 | Msa1257570 | -0.815195 | 1.046993e-51 | -8.615850e-47 |
| Msa0850690 | Msa1257570 | 0.841792 | 3.832102e-58 | -8.615850e-47 |
| Msa0865420 | Msa1257570 | 0.866990 | 1.903146e-65 | -8.615850e-47 |
| Msa0865450 | Msa1257570 | 0.809184 | 2.144842e-50 | -8.615850e-47 |
| Msa0931400 | Msa1257570 | 0.801599 | 8.345099e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257570 | MtrunA17_Chr4g0056231 | 97.107 | 242 | 7 | 0 | 1 | 242 | 1 | 242 | 3.29e-176 | 483 |
| Msa1257570 | MtrunA17_Chr5g0399141 | 76.033 | 242 | 58 | 0 | 1 | 242 | 2 | 243 | 7.09e-136 | 382 |
| Msa1257570 | MtrunA17_Chr4g0012521 | 63.866 | 238 | 85 | 1 | 5 | 242 | 4 | 240 | 1.26e-114 | 328 |
| Msa1257570 | MtrunA17_Chr7g0230901 | 64.706 | 238 | 83 | 1 | 5 | 242 | 4 | 240 | 1.40e-112 | 323 |
| Msa1257570 | MtrunA17_Chr4g0012141 | 48.077 | 208 | 76 | 3 | 4 | 211 | 15 | 190 | 1.81e-58 | 184 |
| Msa1257570 | MtrunA17_Chr4g0012151 | 46.154 | 208 | 101 | 2 | 4 | 209 | 21 | 219 | 1.01e-54 | 176 |
| Msa1257570 | MtrunA17_Chr5g0399741 | 42.105 | 209 | 92 | 2 | 7 | 215 | 6 | 185 | 4.01e-51 | 166 |
| Msa1257570 | MtrunA17_Chr4g0055631 | 39.013 | 223 | 106 | 3 | 7 | 228 | 9 | 202 | 9.76e-51 | 165 |
| Msa1257570 | MtrunA17_Chr4g0066671 | 56.028 | 141 | 62 | 0 | 6 | 146 | 4 | 144 | 3.31e-50 | 166 |
| Msa1257570 | MtrunA17_Chr4g0012291 | 61.600 | 125 | 48 | 0 | 4 | 128 | 20 | 144 | 5.66e-49 | 161 |
| Msa1257570 | MtrunA17_Chr1g0191261 | 40.704 | 199 | 112 | 2 | 7 | 205 | 6 | 198 | 2.64e-43 | 151 |
| Msa1257570 | MtrunA17_Chr4g0012091 | 48.947 | 190 | 70 | 3 | 20 | 208 | 5 | 168 | 2.18e-41 | 140 |
| Msa1257570 | MtrunA17_Chr4g0012341 | 55.738 | 61 | 24 | 2 | 39 | 96 | 2 | 62 | 4.49e-15 | 68.2 |
| Msa1257570 | MtrunA17_Chr4g0012381 | 64.103 | 39 | 14 | 0 | 31 | 69 | 1 | 39 | 1.37e-12 | 60.8 |
| Msa1257570 | MtrunA17_Chr2g0323731 | 31.967 | 122 | 76 | 2 | 12 | 129 | 87 | 205 | 3.47e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257570 | AT2G45140.1 | 66.527 | 239 | 77 | 2 | 5 | 242 | 3 | 239 | 2.55e-108 | 312 |
| Msa1257570 | AT3G60600.1 | 63.750 | 240 | 84 | 2 | 4 | 242 | 19 | 256 | 3.79e-101 | 295 |
| Msa1257570 | AT2G45140.2 | 63.180 | 239 | 68 | 3 | 5 | 242 | 3 | 222 | 5.63e-99 | 288 |
| Msa1257570 | AT4G00170.1 | 59.833 | 239 | 90 | 4 | 5 | 241 | 4 | 238 | 2.90e-92 | 271 |
| Msa1257570 | AT3G60600.3 | 72.956 | 159 | 41 | 1 | 4 | 162 | 19 | 175 | 3.90e-83 | 248 |
| Msa1257570 | AT3G60600.2 | 67.797 | 177 | 49 | 2 | 4 | 180 | 19 | 187 | 2.18e-82 | 246 |
| Msa1257570 | AT4G00170.2 | 57.674 | 215 | 85 | 4 | 29 | 241 | 1 | 211 | 4.44e-77 | 232 |
| Msa1257570 | AT1G51270.13 | 63.158 | 152 | 56 | 0 | 6 | 157 | 4 | 155 | 5.62e-68 | 214 |
| Msa1257570 | AT1G51270.12 | 63.158 | 152 | 56 | 0 | 6 | 157 | 4 | 155 | 5.62e-68 | 214 |
| Msa1257570 | AT1G51270.14 | 63.158 | 152 | 56 | 0 | 6 | 157 | 4 | 155 | 5.62e-68 | 214 |
| Msa1257570 | AT1G51270.11 | 63.158 | 152 | 56 | 0 | 6 | 157 | 4 | 155 | 5.62e-68 | 214 |
| Msa1257570 | AT1G51270.5 | 63.057 | 157 | 57 | 1 | 1 | 157 | 1 | 156 | 7.90e-68 | 213 |
| Msa1257570 | AT1G51270.15 | 63.158 | 152 | 56 | 0 | 6 | 157 | 4 | 155 | 7.86e-67 | 214 |
| Msa1257570 | AT1G51270.8 | 63.158 | 152 | 56 | 0 | 6 | 157 | 175 | 326 | 1.10e-65 | 213 |
| Msa1257570 | AT1G51270.8 | 57.962 | 157 | 65 | 1 | 1 | 157 | 1 | 156 | 4.98e-59 | 195 |
| Msa1257570 | AT1G51270.2 | 63.158 | 152 | 56 | 0 | 6 | 157 | 175 | 326 | 1.10e-65 | 213 |
| Msa1257570 | AT1G51270.2 | 57.962 | 157 | 65 | 1 | 1 | 157 | 1 | 156 | 4.98e-59 | 195 |
| Msa1257570 | AT1G51270.1 | 63.158 | 152 | 56 | 0 | 6 | 157 | 175 | 326 | 2.52e-65 | 213 |
| Msa1257570 | AT1G51270.1 | 57.962 | 157 | 65 | 1 | 1 | 157 | 1 | 156 | 9.31e-59 | 195 |
| Msa1257570 | AT1G51270.9 | 63.158 | 152 | 56 | 0 | 6 | 157 | 127 | 278 | 3.12e-65 | 213 |
| Msa1257570 | AT1G51270.9 | 58.879 | 107 | 44 | 0 | 51 | 157 | 2 | 108 | 3.40e-38 | 140 |
| Msa1257570 | AT1G51270.6 | 63.158 | 152 | 56 | 0 | 6 | 157 | 127 | 278 | 3.12e-65 | 213 |
| Msa1257570 | AT1G51270.6 | 58.879 | 107 | 44 | 0 | 51 | 157 | 2 | 108 | 3.40e-38 | 140 |
| Msa1257570 | AT1G51270.7 | 63.158 | 152 | 56 | 0 | 6 | 157 | 127 | 278 | 3.12e-65 | 213 |
| Msa1257570 | AT1G51270.7 | 58.879 | 107 | 44 | 0 | 51 | 157 | 2 | 108 | 3.40e-38 | 140 |
| Msa1257570 | AT1G51270.10 | 63.158 | 152 | 56 | 0 | 6 | 157 | 127 | 278 | 3.12e-65 | 213 |
| Msa1257570 | AT1G51270.10 | 58.879 | 107 | 44 | 0 | 51 | 157 | 2 | 108 | 3.40e-38 | 140 |
| Msa1257570 | AT1G51270.3 | 63.158 | 152 | 56 | 0 | 6 | 157 | 175 | 326 | 7.44e-65 | 213 |
| Msa1257570 | AT1G51270.3 | 57.962 | 157 | 65 | 1 | 1 | 157 | 1 | 156 | 2.47e-58 | 195 |
| Msa1257570 | AT5G47180.1 | 41.909 | 241 | 107 | 5 | 4 | 242 | 6 | 215 | 5.21e-60 | 189 |
| Msa1257570 | AT5G47180.2 | 41.909 | 241 | 107 | 5 | 4 | 242 | 6 | 215 | 5.21e-60 | 189 |
| Msa1257570 | AT2G23830.1 | 65.323 | 124 | 43 | 0 | 4 | 127 | 3 | 126 | 1.48e-56 | 177 |
| Msa1257570 | AT1G08820.1 | 52.703 | 148 | 66 | 1 | 7 | 154 | 5 | 148 | 2.64e-44 | 153 |
| Msa1257570 | AT1G08820.5 | 52.703 | 148 | 66 | 1 | 7 | 154 | 5 | 148 | 2.64e-44 | 153 |
| Msa1257570 | AT1G08820.3 | 52.703 | 148 | 66 | 1 | 7 | 154 | 5 | 148 | 2.64e-44 | 153 |
| Msa1257570 | AT1G08820.4 | 52.703 | 148 | 66 | 1 | 7 | 154 | 5 | 148 | 2.64e-44 | 153 |
| Msa1257570 | AT1G08820.2 | 52.703 | 148 | 66 | 1 | 7 | 154 | 5 | 148 | 2.64e-44 | 153 |
| Msa1257570 | AT1G51270.4 | 63.953 | 86 | 31 | 0 | 72 | 157 | 1 | 86 | 3.36e-32 | 121 |
| Msa1257570 | AT4G05060.1 | 31.387 | 137 | 86 | 3 | 3 | 134 | 95 | 228 | 1.57e-12 | 66.2 |
| Msa1257570 | AT4G21450.1 | 31.496 | 127 | 79 | 3 | 8 | 129 | 108 | 231 | 1.75e-12 | 65.9 |
Find 94 sgRNAs with CRISPR-Local
Find 329 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACGCATAACTGAATATTAT+TGG | 0.214209 | 8_2:+58204523 | Msa1257570:three_prime_UTR |
| AAAATGAAAATGAAAATAAT+TGG | 0.251127 | 8_2:-58200264 | None:intergenic |
| AAATGAAAATAATTGGAGTT+TGG | 0.258545 | 8_2:-58200257 | None:intergenic |
| AAGATCTACCTGCGATGTTA+TGG | 0.307994 | 8_2:+58200903 | Msa1257570:CDS |
| GACCCTTCCTCAGAACCTTC+TGG | 0.314635 | 8_2:-58201319 | None:intergenic |
| TTTATAATTGTCATATTAAT+CGG | 0.319180 | 8_2:+58204010 | Msa1257570:CDS |
| ATATCCGCAGAGATATCTTT+TGG | 0.319733 | 8_2:-58201111 | None:intergenic |
| GGACCCACTTGTGCGAATTC+AGG | 0.322000 | 8_2:-58201385 | None:intergenic |
| AATGAAAATAATTGGAGTTT+GGG | 0.331446 | 8_2:-58200256 | None:intergenic |
| TTTGGAAGTAGAAGACTTTA+GGG | 0.332022 | 8_2:+58204218 | Msa1257570:three_prime_UTR |
| TGATGTGAAGAAGATGAAAT+TGG | 0.352283 | 8_2:-58200319 | None:intergenic |
| TCAATGTGCGTTGAAACTTA+TGG | 0.354390 | 8_2:-58200123 | None:intergenic |
| GAAAATTATCGTTACCTTGA+AGG | 0.356059 | 8_2:-58200594 | None:intergenic |
| GGTCAAAACGACCACAATTC+AGG | 0.356411 | 8_2:+58204381 | Msa1257570:three_prime_UTR |
| CTTATCCTTGCATTGCATAT+CGG | 0.361379 | 8_2:-58201049 | None:intergenic |
| TGATAGCTATGTTGCCTTCA+AGG | 0.365195 | 8_2:+58200580 | Msa1257570:CDS |
| AGTGAATCCTCACCAGTTCC+TGG | 0.373384 | 8_2:-58203623 | None:intergenic |
| GGGACGAACACAATACTTCC+TGG | 0.379716 | 8_2:-58200860 | None:intergenic |
| AAAAGATATCTCTGCGGATA+TGG | 0.390900 | 8_2:+58201113 | Msa1257570:CDS |
| GGACTTAGGATTTAATAAAC+TGG | 0.399650 | 8_2:-58200078 | None:intergenic |
| GTCATATTAATCGGCTTACT+TGG | 0.400261 | 8_2:+58204019 | Msa1257570:CDS |
| ATGTGAACTGACTCATGCTT+TGG | 0.409844 | 8_2:+58204268 | Msa1257570:three_prime_UTR |
| CGGCTTACTTGGCGTAATCA+TGG | 0.416267 | 8_2:+58204030 | Msa1257570:CDS |
| TAGCAGGCTCCGCCAGGAAC+TGG | 0.424265 | 8_2:+58203611 | Msa1257570:CDS |
| ACCCTTCCTCAGAACCTTCT+GGG | 0.431309 | 8_2:-58201318 | None:intergenic |
| TGGTTCTTTGAATTGGTTTG+TGG | 0.432157 | 8_2:-58204494 | None:intergenic |
| GGCAAGACAATTCCAGTGTT+GGG | 0.435557 | 8_2:-58200880 | None:intergenic |
| AGATCTACCTGCGATGTTAT+GGG | 0.436395 | 8_2:+58200904 | Msa1257570:CDS |
| ATGGAAATAAAATACAGATA+TGG | 0.442140 | 8_2:-58200104 | None:intergenic |
| TCCTCAGAACCTTCTGGGAC+TGG | 0.457111 | 8_2:-58201313 | None:intergenic |
| ATGATTATGATTATGATGAC+AGG | 0.462311 | 8_2:-58200222 | None:intergenic |
| CACAATTCAGGAACTCTCTC+AGG | 0.462772 | 8_2:+58204393 | Msa1257570:three_prime_UTR |
| ATAACATCGCAGGTAGATCT+TGG | 0.463396 | 8_2:-58200901 | None:intergenic |
| TTTCAATGTGGTGGAGAAAG+TGG | 0.470634 | 8_2:-58200151 | None:intergenic |
| GGGACTGGAGATGGTGGTTG+CGG | 0.477331 | 8_2:-58201298 | None:intergenic |
| TAGATCAATTCTTCATGTGT+TGG | 0.478588 | 8_2:+58204152 | Msa1257570:three_prime_UTR |
| GGCTTACTTGGCGTAATCAT+GGG | 0.479720 | 8_2:+58204031 | Msa1257570:CDS |
| GCAGATTTGTCTTGAGCCAC+AGG | 0.481466 | 8_2:-58201516 | None:intergenic |
| TCCTTGCATTGCATATCGGC+TGG | 0.482696 | 8_2:-58201045 | None:intergenic |
| TGTGAACTGACTCATGCTTT+GGG | 0.483704 | 8_2:+58204269 | Msa1257570:three_prime_UTR |
| GCTTAGTTCAACAAGGAGGC+AGG | 0.499365 | 8_2:+58201229 | Msa1257570:intron |
| TGGCAAGACAATTCCAGTGT+TGG | 0.505017 | 8_2:-58200881 | None:intergenic |
| GAACCTTCTGGGACTGGAGA+TGG | 0.512445 | 8_2:-58201307 | None:intergenic |
| CATCTCTGAGTAATTGAAGC+AGG | 0.515251 | 8_2:-58200372 | None:intergenic |
| TTCATCTAGTGACTAGCATA+TGG | 0.515391 | 8_2:+58204346 | Msa1257570:three_prime_UTR |
| ATCAAACCGTGCAAATGCTT+AGG | 0.524296 | 8_2:-58204071 | None:intergenic |
| TACAGATATGGAAAGGACTT+AGG | 0.525045 | 8_2:-58200092 | None:intergenic |
| GGACGAACACAATACTTCCT+GGG | 0.526313 | 8_2:-58200859 | None:intergenic |
| CCTCACTGTTCAAGCAATTG+TGG | 0.529762 | 8_2:+58204118 | Msa1257570:three_prime_UTR |
| ATGCAATTCAACAAACTAGC+AGG | 0.535469 | 8_2:+58203595 | Msa1257570:CDS |
| ACAAACTAGCAGGCTCCGCC+AGG | 0.538008 | 8_2:+58203605 | Msa1257570:CDS |
| ACTGGAGATGGTGGTTGCGG+CGG | 0.540247 | 8_2:-58201295 | None:intergenic |
| AGGTGAAAACAACGAATCCC+AGG | 0.543965 | 8_2:+58200842 | Msa1257570:intron |
| TATTGTGTTCGTCCCAACAC+TGG | 0.549323 | 8_2:+58200868 | Msa1257570:CDS |
| CGGGATTGCTTAGTTCAACA+AGG | 0.549410 | 8_2:+58201222 | Msa1257570:intron |
| GTCCCAGAAGGTTCTGAGGA+AGG | 0.549939 | 8_2:+58201316 | Msa1257570:CDS |
| AGCATATGGTAACATCAAGT+TGG | 0.550268 | 8_2:+58204360 | Msa1257570:three_prime_UTR |
| GGAGGCAGGACATGTGGTCG+AGG | 0.551010 | 8_2:+58201243 | Msa1257570:CDS |
| AAGACTTTAGGGGAAGTTGT+GGG | 0.551128 | 8_2:+58204229 | Msa1257570:three_prime_UTR |
| GTTCGAGAGGTTCGATGCTG+AGG | 0.558096 | 8_2:-58200412 | None:intergenic |
| TCCCAGAAGGTTCTGAGGAA+GGG | 0.560679 | 8_2:+58201317 | Msa1257570:CDS |
| GAAGACTTTAGGGGAAGTTG+TGG | 0.564706 | 8_2:+58204228 | Msa1257570:three_prime_UTR |
| CTGAGAGAGTTCCTGAATTG+TGG | 0.571253 | 8_2:-58204392 | None:intergenic |
| CAGGGGAACTTGAGTTCGAG+AGG | 0.576125 | 8_2:-58200425 | None:intergenic |
| TGATTATGATTATGATGACA+GGG | 0.578069 | 8_2:-58200221 | None:intergenic |
| CCTTCTGGGACTGGAGATGG+TGG | 0.580395 | 8_2:-58201304 | None:intergenic |
| GATGCTGAGGAGATCACCAT+CGG | 0.583008 | 8_2:-58200399 | None:intergenic |
| TCCAGCCGATATGCAATGCA+AGG | 0.588712 | 8_2:+58201044 | Msa1257570:CDS |
| TTGTGCGAATTCAGGACCAC+TGG | 0.590490 | 8_2:-58201377 | None:intergenic |
| TCTTTGAATTTGGCAAGTAG+CGG | 0.591657 | 8_2:+58204441 | Msa1257570:three_prime_UTR |
| GGGATATTTCAGGTAACAAG+AGG | 0.592637 | 8_2:+58201480 | Msa1257570:intron |
| ATCCGTACCCATAACATCGC+AGG | 0.597634 | 8_2:-58200911 | None:intergenic |
| AGGCAAGAGCTCTTATCTCA+AGG | 0.599068 | 8_2:+58203553 | Msa1257570:intron |
| AGGATCTGCTGAACGACCTG+TGG | 0.602071 | 8_2:+58201500 | Msa1257570:CDS |
| ATGCTGAGGAGATCACCATC+GGG | 0.602500 | 8_2:-58200398 | None:intergenic |
| AATAAAATACAGATATGGAA+AGG | 0.602880 | 8_2:-58200099 | None:intergenic |
| AGAAGACCTAAGCATTTGCA+CGG | 0.606810 | 8_2:+58204065 | Msa1257570:exon |
| TCAGAAAATGGAAATGCCAG+TGG | 0.609259 | 8_2:+58201361 | Msa1257570:CDS |
| TAGGAGCTGCTGAAGCGTGA+AGG | 0.615403 | 8_2:+58203962 | Msa1257570:intron |
| TCCAGTCCCAGAAGGTTCTG+AGG | 0.617607 | 8_2:+58201312 | Msa1257570:CDS |
| TGTGAAGAAGATGAAATTGG+AGG | 0.628989 | 8_2:-58200316 | None:intergenic |
| GTGAAGAAGATGAAATTGGA+GGG | 0.629834 | 8_2:-58200315 | None:intergenic |
| CAACAAGGAGGCAGGACATG+TGG | 0.633592 | 8_2:+58201237 | Msa1257570:CDS |
| CCACCATCTCCAGTCCCAGA+AGG | 0.633985 | 8_2:+58201304 | Msa1257570:CDS |
| TACTCAGAGATGAGTCCCGA+TGG | 0.636351 | 8_2:+58200383 | Msa1257570:exon |
| GCTTACTTGGCGTAATCATG+GGG | 0.641142 | 8_2:+58204032 | Msa1257570:CDS |
| GGCTCAAGACAAATCTGCAG+AGG | 0.648897 | 8_2:+58201521 | Msa1257570:CDS |
| GAGGAAGGGTCATCCCCTAG+AGG | 0.683330 | 8_2:+58201331 | Msa1257570:CDS |
| CGAGGAGTGCAAATTGAGAG+TGG | 0.686274 | 8_2:+58201261 | Msa1257570:CDS |
| CCACAATTGCTTGAACAGTG+AGG | 0.691088 | 8_2:-58204118 | None:intergenic |
| TTGGAAGTAGAAGACTTTAG+GGG | 0.697129 | 8_2:+58204219 | Msa1257570:three_prime_UTR |
| GAATCCTCACCAGTTCCTGG+CGG | 0.725681 | 8_2:-58203620 | None:intergenic |
| GATTGCTTAGTTCAACAAGG+AGG | 0.758050 | 8_2:+58201225 | Msa1257570:intron |
| CAGTCCAAAAGATATCTCTG+CGG | 0.763749 | 8_2:+58201107 | Msa1257570:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATGAAAATGAAAATAAT+TGG | - | chr8_2:58200267-58200286 | None:intergenic | 10.0% |
| !! | TTTATAATTGTCATATTAAT+CGG | + | chr8_2:58204010-58204029 | Msa1257570:CDS | 10.0% |
| !!! | ATTGTATTTTGATTTTGTTT+AGG | + | chr8_2:58200822-58200841 | Msa1257570:intron | 15.0% |
| !! | ATTTAATTATAACAGAACAT+TGG | + | chr8_2:58201685-58201704 | Msa1257570:intron | 15.0% |
| !! | TTTAATTATAACAGAACATT+GGG | + | chr8_2:58201686-58201705 | Msa1257570:intron | 15.0% |
| !!! | TTTTATTTTCAATCTACAAA+AGG | + | chr8_2:58203061-58203080 | Msa1257570:intron | 15.0% |
| !! | AATAAAATACAGATATGGAA+AGG | - | chr8_2:58200102-58200121 | None:intergenic | 20.0% |
| !! | ATGGAAATAAAATACAGATA+TGG | - | chr8_2:58200107-58200126 | None:intergenic | 20.0% |
| !!! | TCTTTTTTCTTTTCTTCTTT+TGG | - | chr8_2:58200186-58200205 | None:intergenic | 20.0% |
| !! | AATGAAAATAATTGGAGTTT+GGG | - | chr8_2:58200259-58200278 | None:intergenic | 20.0% |
| !! | AAATGAAAATAATTGGAGTT+TGG | - | chr8_2:58200260-58200279 | None:intergenic | 20.0% |
| !! | AGATATTCTTGTATGAAAAA+AGG | - | chr8_2:58201439-58201458 | None:intergenic | 20.0% |
| !! | TTAATTATAACAGAACATTG+GGG | + | chr8_2:58201687-58201706 | Msa1257570:intron | 20.0% |
| !! | ATTTAGTTGTGATAATTAGT+AGG | + | chr8_2:58201972-58201991 | Msa1257570:intron | 20.0% |
| !! | TTTAGTTGTGATAATTAGTA+GGG | + | chr8_2:58201973-58201992 | Msa1257570:intron | 20.0% |
| !! | ATTTAGTTGTGATAATTAGT+AGG | + | chr8_2:58201972-58201991 | Msa1257570:intron | 20.0% |
| !! | TTTAGTTGTGATAATTAGTA+GGG | + | chr8_2:58201973-58201992 | Msa1257570:intron | 20.0% |
| !!! | ACTTAATGTAAGGATATTTT+AGG | + | chr8_2:58202517-58202536 | Msa1257570:intron | 20.0% |
| !!! | TTTTAAAACACTCCAATATT+GGG | - | chr8_2:58202590-58202609 | None:intergenic | 20.0% |
| !!! | GAGTGTTTTAAAACTTATTA+AGG | + | chr8_2:58202597-58202616 | Msa1257570:intron | 20.0% |
| !! | CAACAAACAGTTATATAAAT+TGG | - | chr8_2:58202838-58202857 | None:intergenic | 20.0% |
| !! | CAATTTATATAACTGTTTGT+TGG | + | chr8_2:58202836-58202855 | Msa1257570:intron | 20.0% |
| !! | TAAAATTCATATTTGGAAGT+TGG | - | chr8_2:58203038-58203057 | None:intergenic | 20.0% |
| !! | ATGTAATGTAAATATTACGA+AGG | - | chr8_2:58203197-58203216 | None:intergenic | 20.0% |
| !! | TACATTCTATTAAAATAGTG+AGG | + | chr8_2:58203212-58203231 | Msa1257570:intron | 20.0% |
| !!! | AACATGTGAGTTTTTAAAAT+TGG | - | chr8_2:58203263-58203282 | None:intergenic | 20.0% |
| !! | TTTAAAAACTCACATGTTAA+AGG | + | chr8_2:58203265-58203284 | Msa1257570:intron | 20.0% |
| !! | GAAAAGCTTAAATATGTATT+GGG | - | chr8_2:58203292-58203311 | None:intergenic | 20.0% |
| !! | TGAAAAGCTTAAATATGTAT+TGG | - | chr8_2:58203293-58203312 | None:intergenic | 20.0% |
| !!! | TATGTATTGCTACTATTTTA+TGG | + | chr8_2:58203794-58203813 | Msa1257570:intron | 20.0% |
| !! | TGAATGAATTTATTACTTGT+AGG | + | chr8_2:58203943-58203962 | Msa1257570:intron | 20.0% |
| !!! | TTTATTTTCCCTTGTATTTT+TGG | + | chr8_2:58204184-58204203 | Msa1257570:three_prime_UTR | 20.0% |
| !!! | TTATTTTCCCTTGTATTTTT+GGG | + | chr8_2:58204185-58204204 | Msa1257570:three_prime_UTR | 20.0% |
| !!! | TTTTCTATTTTTCAATGTGG+TGG | - | chr8_2:58200163-58200182 | None:intergenic | 25.0% |
| !!! | TGGTTTTCTATTTTTCAATG+TGG | - | chr8_2:58200166-58200185 | None:intergenic | 25.0% |
| ! | TGATTATGATTATGATGACA+GGG | - | chr8_2:58200224-58200243 | None:intergenic | 25.0% |
| ! | ATGATTATGATTATGATGAC+AGG | - | chr8_2:58200225-58200244 | None:intergenic | 25.0% |
| ! | AAAATGACGAAAATCATTCA+TGG | - | chr8_2:58200770-58200789 | None:intergenic | 25.0% |
| ! | TTGAAAATGCAAAATTTGAG+TGG | + | chr8_2:58200794-58200813 | Msa1257570:intron | 25.0% |
| ! | TAAACACAAGTGAAAAGAAA+CGG | - | chr8_2:58200958-58200977 | None:intergenic | 25.0% |
| ! | ATTCTTGTATGAAAAAAGGT+AGG | - | chr8_2:58201435-58201454 | None:intergenic | 25.0% |
| ! | CTTACTCTTAAGTAACTAAA+AGG | - | chr8_2:58201741-58201760 | None:intergenic | 25.0% |
| ! | AATTAAAATGAGATGAGAGT+GGG | + | chr8_2:58201815-58201834 | Msa1257570:intron | 25.0% |
| !! | AACAGAAATAAAAAGAGCAT+TGG | + | chr8_2:58201917-58201936 | Msa1257570:intron | 25.0% |
| !!! | ATTGGTTTTCTCAAATACTA+AGG | + | chr8_2:58201935-58201954 | Msa1257570:intron | 25.0% |
| !!! | TTGGTTTTCTCAAATACTAA+GGG | + | chr8_2:58201936-58201955 | Msa1257570:intron | 25.0% |
| ! | AATTTGTGACACTTAATGTA+AGG | + | chr8_2:58202507-58202526 | Msa1257570:intron | 25.0% |
| ! | ATGTGTTTATAAAATCCTAG+AGG | - | chr8_2:58202548-58202567 | None:intergenic | 25.0% |
| !! | TTTAAAACACTCCAATATTG+GGG | - | chr8_2:58202589-58202608 | None:intergenic | 25.0% |
| !!! | GTTTTAAAACACTCCAATAT+TGG | - | chr8_2:58202591-58202610 | None:intergenic | 25.0% |
| !!! | TTTTGTTCAATTTCTAGGAA+TGG | - | chr8_2:58202640-58202659 | None:intergenic | 25.0% |
| !!! | AGTTGTTTTGTTCAATTTCT+AGG | - | chr8_2:58202645-58202664 | None:intergenic | 25.0% |
| !!! | CTATTTTTTTCTCATGCTAT+GGG | - | chr8_2:58203010-58203029 | None:intergenic | 25.0% |
| !!! | ACTATTTTTTTCTCATGCTA+TGG | - | chr8_2:58203011-58203030 | None:intergenic | 25.0% |
| ! | TATTTATGACTTAACGATCA+TGG | + | chr8_2:58203381-58203400 | Msa1257570:intron | 25.0% |
| !!! | ATTACTGACTCTAAAATTAC+AGG | - | chr8_2:58203495-58203514 | None:intergenic | 25.0% |
| !! | GTTTTTGATAGAAAAGTCTA+TGG | + | chr8_2:58203731-58203750 | Msa1257570:intron | 25.0% |
| !! | TATTGCTACTATTTTATGGA+GGG | + | chr8_2:58203798-58203817 | Msa1257570:intron | 25.0% |
| ! | ATGTTGAAAGAATCATTTGA+TGG | - | chr8_2:58203895-58203914 | None:intergenic | 25.0% |
| ! | GATTCTTTCAACATTAGTTA+TGG | + | chr8_2:58203901-58203920 | Msa1257570:intron | 25.0% |
| ! | AGGAACAAAGTAAAAATCTA+TGG | - | chr8_2:58204101-58204120 | None:intergenic | 25.0% |
| !! | CATTCTTTTTGTAACTTAAG+AGG | + | chr8_2:58204299-58204318 | Msa1257570:three_prime_UTR | 25.0% |
| !!! | ACCTTTTTTGTCTTTGAATT+TGG | + | chr8_2:58204431-58204450 | Msa1257570:three_prime_UTR | 25.0% |
| !!! | GGTTTTTATTTGGATCAATT+TGG | - | chr8_2:58204476-58204495 | None:intergenic | 25.0% |
| !!! | ATTGGTTTGTGGTTTTTATT+TGG | - | chr8_2:58204486-58204505 | None:intergenic | 25.0% |
| !!! | AGTTTTATGGTTCTTTGAAT+TGG | - | chr8_2:58204504-58204523 | None:intergenic | 25.0% |
| GGACTTAGGATTTAATAAAC+TGG | - | chr8_2:58200081-58200100 | None:intergenic | 30.0% | |
| TGATGTGAAGAAGATGAAAT+TGG | - | chr8_2:58200322-58200341 | None:intergenic | 30.0% | |
| AAAGGAAATGGAAACTTACA+GGG | - | chr8_2:58200446-58200465 | None:intergenic | 30.0% | |
| GAAAAATGGAAAGAGATCAA+AGG | - | chr8_2:58200464-58200483 | None:intergenic | 30.0% | |
| !! | TGATCTCTTTCCATTTTTCT+AGG | + | chr8_2:58200465-58200484 | Msa1257570:intron | 30.0% |
| !! | GATCTCTTTCCATTTTTCTA+GGG | + | chr8_2:58200466-58200485 | Msa1257570:intron | 30.0% |
| GAAAATTATCGTTACCTTGA+AGG | - | chr8_2:58200597-58200616 | None:intergenic | 30.0% | |
| ACATTGCGAAAAAACTAACA+GGG | - | chr8_2:58200740-58200759 | None:intergenic | 30.0% | |
| AACATTGCGAAAAAACTAAC+AGG | - | chr8_2:58200741-58200760 | None:intergenic | 30.0% | |
| !!! | TGTTAGTTTTTTCGCAATGT+TGG | + | chr8_2:58200740-58200759 | Msa1257570:intron | 30.0% |
| ! | TTTCTGAAAAAGAACCTCTA+GGG | - | chr8_2:58201348-58201367 | None:intergenic | 30.0% |
| !! | TTTTCTGAAAAAGAACCTCT+AGG | - | chr8_2:58201349-58201368 | None:intergenic | 30.0% |
| !!! | AGAGGTTCTTTTTCAGAAAA+TGG | + | chr8_2:58201349-58201368 | Msa1257570:CDS | 30.0% |
| AACTAAAACAGGACAAGTTA+AGG | - | chr8_2:58201409-58201428 | None:intergenic | 30.0% | |
| !!! | ATTGAGATGCTTTTTCTTCT+TGG | + | chr8_2:58201459-58201478 | Msa1257570:intron | 30.0% |
| !!! | TTGAGATGCTTTTTCTTCTT+GGG | + | chr8_2:58201460-58201479 | Msa1257570:intron | 30.0% |
| ! | TTTTCTTCTTGGGATATTTC+AGG | + | chr8_2:58201470-58201489 | Msa1257570:intron | 30.0% |
| AGAATTCAATGAGTTCAACT+GGG | - | chr8_2:58201611-58201630 | None:intergenic | 30.0% | |
| ! | TTACGCTCATGAATTTTTGT+AGG | + | chr8_2:58201649-58201668 | Msa1257570:intron | 30.0% |
| AAGACAGTTGCAAAGTATAA+CGG | + | chr8_2:58201758-58201777 | Msa1257570:intron | 30.0% | |
| ACAACTAATCAACTGTTAGT+TGG | + | chr8_2:58201782-58201801 | Msa1257570:intron | 30.0% | |
| GAATTAAAATGAGATGAGAG+TGG | + | chr8_2:58201814-58201833 | Msa1257570:intron | 30.0% | |
| ATTAAAATGAGATGAGAGTG+GGG | + | chr8_2:58201816-58201835 | Msa1257570:intron | 30.0% | |
| TCATATATCATGGGTATGTT+TGG | + | chr8_2:58202069-58202088 | Msa1257570:intron | 30.0% | |
| TCATATATCATGGGTATGTT+TGG | + | chr8_2:58202069-58202088 | Msa1257570:intron | 30.0% | |
| GAACCAAACATACCATATAA+GGG | - | chr8_2:58202384-58202403 | None:intergenic | 30.0% | |
| TGAACCAAACATACCATATA+AGG | - | chr8_2:58202385-58202404 | None:intergenic | 30.0% | |
| TTAAAACACTCCAATATTGG+GGG | - | chr8_2:58202588-58202607 | None:intergenic | 30.0% | |
| ! | AAAAATATCAAGGCATCTAG+GGG | - | chr8_2:58203099-58203118 | None:intergenic | 30.0% |
| ! | CAAAAATATCAAGGCATCTA+GGG | - | chr8_2:58203100-58203119 | None:intergenic | 30.0% |
| CTATTAAAATAGTGAGGACT+CGG | + | chr8_2:58203218-58203237 | Msa1257570:intron | 30.0% | |
| ACTCGGACTTAATTTCAAAT+TGG | + | chr8_2:58203235-58203254 | Msa1257570:intron | 30.0% | |
| CTCGGACTTAATTTCAAATT+GGG | + | chr8_2:58203236-58203255 | Msa1257570:intron | 30.0% | |
| ! | AAAGCTGATGGATAATTTCA+TGG | + | chr8_2:58203330-58203349 | Msa1257570:intron | 30.0% |
| TCATGGTTTAAATATCCACA+AGG | + | chr8_2:58203347-58203366 | Msa1257570:intron | 30.0% | |
| CATGGTTTAAATATCCACAA+GGG | + | chr8_2:58203348-58203367 | Msa1257570:intron | 30.0% | |
| AATAAAGTAAACAACCCTTG+TGG | - | chr8_2:58203365-58203384 | None:intergenic | 30.0% | |
| ! | TGGTATTTGGAAAAGCATAA+CGG | + | chr8_2:58203401-58203420 | Msa1257570:intron | 30.0% |
| AGAAAAGGGAGAAATAATTG+TGG | + | chr8_2:58203425-58203444 | Msa1257570:intron | 30.0% | |
| ! | GTGGTTATCTGTTTTCTTTT+TGG | + | chr8_2:58203444-58203463 | Msa1257570:intron | 30.0% |
| ! | ATGGATTTTCAGTCTGAATA+GGG | + | chr8_2:58203699-58203718 | Msa1257570:intron | 30.0% |
| ! | GTATTGCTACTATTTTATGG+AGG | + | chr8_2:58203797-58203816 | Msa1257570:intron | 30.0% |
| ! | ATTGCTACTATTTTATGGAG+GGG | + | chr8_2:58203799-58203818 | Msa1257570:intron | 30.0% |
| !! | TCTGCCATTTGTTTTCTATT+AGG | + | chr8_2:58203840-58203859 | Msa1257570:intron | 30.0% |
| !! | CTGCCATTTGTTTTCTATTA+GGG | + | chr8_2:58203841-58203860 | Msa1257570:intron | 30.0% |
| !! | TGCCATTTGTTTTCTATTAG+GGG | + | chr8_2:58203842-58203861 | Msa1257570:intron | 30.0% |
| TAGATCAATTCTTCATGTGT+TGG | + | chr8_2:58204152-58204171 | Msa1257570:three_prime_UTR | 30.0% | |
| TTATCCACCCAAAAATACAA+GGG | - | chr8_2:58204195-58204214 | None:intergenic | 30.0% | |
| !!! | TTTTTGGGTGGATAACATTT+TGG | + | chr8_2:58204200-58204219 | Msa1257570:three_prime_UTR | 30.0% |
| !! | TTTTGGAAGTAGAAGACTTT+AGG | + | chr8_2:58204217-58204236 | Msa1257570:three_prime_UTR | 30.0% |
| TTTGGAAGTAGAAGACTTTA+GGG | + | chr8_2:58204218-58204237 | Msa1257570:three_prime_UTR | 30.0% | |
| !! | AAAGTTTGTCGTTTCTTTTG+TGG | + | chr8_2:58204323-58204342 | Msa1257570:three_prime_UTR | 30.0% |
| GCCAAATTCAAAGACAAAAA+AGG | - | chr8_2:58204435-58204454 | None:intergenic | 30.0% | |
| !! | TTCAGTTATGCGTAGTTTTA+TGG | - | chr8_2:58204517-58204536 | None:intergenic | 30.0% |
| TACAGATATGGAAAGGACTT+AGG | - | chr8_2:58200095-58200114 | None:intergenic | 35.0% | |
| TCAATGTGCGTTGAAACTTA+TGG | - | chr8_2:58200126-58200145 | None:intergenic | 35.0% | |
| GTGAAGAAGATGAAATTGGA+GGG | - | chr8_2:58200318-58200337 | None:intergenic | 35.0% | |
| TGTGAAGAAGATGAAATTGG+AGG | - | chr8_2:58200319-58200338 | None:intergenic | 35.0% | |
| AAGGAAATGGAAACTTACAG+GGG | - | chr8_2:58200445-58200464 | None:intergenic | 35.0% | |
| CAAAGGAAATGGAAACTTAC+AGG | - | chr8_2:58200447-58200466 | None:intergenic | 35.0% | |
| TGGAAAGAGATCAAAGGAAA+TGG | - | chr8_2:58200458-58200477 | None:intergenic | 35.0% | |
| ! | CGTTTGAAACCCTAGAAAAA+TGG | - | chr8_2:58200478-58200497 | None:intergenic | 35.0% |
| ATTGCGAAAAAACTAACAGG+GGG | - | chr8_2:58200738-58200757 | None:intergenic | 35.0% | |
| CATTGCGAAAAAACTAACAG+GGG | - | chr8_2:58200739-58200758 | None:intergenic | 35.0% | |
| CTTATCCTTGCATTGCATAT+CGG | - | chr8_2:58201052-58201071 | None:intergenic | 35.0% | |
| ! | ATATCCGCAGAGATATCTTT+TGG | - | chr8_2:58201114-58201133 | None:intergenic | 35.0% |
| AAAAGATATCTCTGCGGATA+TGG | + | chr8_2:58201113-58201132 | Msa1257570:CDS | 35.0% | |
| ! | GTTACAAGATTTGTGCCATT+CGG | + | chr8_2:58201202-58201221 | Msa1257570:intron | 35.0% |
| ! | TTACAAGATTTGTGCCATTC+GGG | + | chr8_2:58201203-58201222 | Msa1257570:intron | 35.0% |
| ! | TTCTGAAAAAGAACCTCTAG+GGG | - | chr8_2:58201347-58201366 | None:intergenic | 35.0% |
| AAGGTAGGTTCAACTAAAAC+AGG | - | chr8_2:58201420-58201439 | None:intergenic | 35.0% | |
| GAATTCAATGAGTTCAACTG+GGG | - | chr8_2:58201610-58201629 | None:intergenic | 35.0% | |
| CAGAATTCAATGAGTTCAAC+TGG | - | chr8_2:58201612-58201631 | None:intergenic | 35.0% | |
| TCTTAAGTAACTAAAAGGCC+TGG | - | chr8_2:58201736-58201755 | None:intergenic | 35.0% | |
| TAATCAACTGTTAGTTGGCA+TGG | + | chr8_2:58201787-58201806 | Msa1257570:intron | 35.0% | |
| TCATTGTTGTAGAGTAGTAC+TGG | + | chr8_2:58201859-58201878 | Msa1257570:intron | 35.0% | |
| !! | TTATTTCTGTTCCCTACGAA+CGG | - | chr8_2:58201908-58201927 | None:intergenic | 35.0% |
| GAAGAGAATTAAAAGACGAC+CGG | + | chr8_2:58201995-58202014 | Msa1257570:intron | 35.0% | |
| AAGAGAATTAAAAGACGACC+GGG | + | chr8_2:58201996-58202015 | Msa1257570:intron | 35.0% | |
| ATATCATGGGTATGTTTGGA+TGG | + | chr8_2:58202073-58202092 | Msa1257570:intron | 35.0% | |
| !! | TTTGGATGGAGAGTTTTGTA+GGG | + | chr8_2:58202087-58202106 | Msa1257570:intron | 35.0% |
| GAAGAGAATTAAAAGACGAC+CGG | + | chr8_2:58201995-58202014 | Msa1257570:intron | 35.0% | |
| AAGAGAATTAAAAGACGACC+GGG | + | chr8_2:58201996-58202015 | Msa1257570:intron | 35.0% | |
| ATATCATGGGTATGTTTGGA+TGG | + | chr8_2:58202073-58202092 | Msa1257570:intron | 35.0% | |
| !! | TTTGGATGGAGAGTTTTGTA+GGG | + | chr8_2:58202087-58202106 | Msa1257570:intron | 35.0% |
| ! | GTAGGGCTAAGTCTATATTT+TGG | + | chr8_2:58202250-58202269 | Msa1257570:intron | 35.0% |
| !!! | ATGGAGGATTTTTTAGAGGA+GGG | - | chr8_2:58202352-58202371 | None:intergenic | 35.0% |
| !!! | TAGGATGGAGGATTTTTTAG+AGG | - | chr8_2:58202356-58202375 | None:intergenic | 35.0% |
| AAACATACCATATAAGGGTG+TGG | - | chr8_2:58202379-58202398 | None:intergenic | 35.0% | |
| ACACCCTTATATGGTATGTT+TGG | + | chr8_2:58202378-58202397 | Msa1257570:intron | 35.0% | |
| ! | TGGTATGTTTGGTTCAAACA+AGG | + | chr8_2:58202389-58202408 | Msa1257570:intron | 35.0% |
| ! | GGTATGTTTGGTTCAAACAA+GGG | + | chr8_2:58202390-58202409 | Msa1257570:intron | 35.0% |
| ! | GTATGTTTGGTTCAAACAAG+GGG | + | chr8_2:58202391-58202410 | Msa1257570:intron | 35.0% |
| ! | ATGAAATGAGGTATCCTGTT+TGG | + | chr8_2:58202426-58202445 | Msa1257570:intron | 35.0% |
| !! | ATATTTTAGGCAATGCCTCT+AGG | + | chr8_2:58202530-58202549 | Msa1257570:intron | 35.0% |
| ! | TGTTCAATTTCTAGGAATGG+AGG | - | chr8_2:58202637-58202656 | None:intergenic | 35.0% |
| ACATAAGAGTCTGTTTGGTT+GGG | - | chr8_2:58202705-58202724 | None:intergenic | 35.0% | |
| AACATAAGAGTCTGTTTGGT+TGG | - | chr8_2:58202706-58202725 | None:intergenic | 35.0% | |
| CTCATACAAGTTTACAGTTG+CGG | + | chr8_2:58202961-58202980 | Msa1257570:intron | 35.0% | |
| ! | GCAAAAATATCAAGGCATCT+AGG | - | chr8_2:58203101-58203120 | None:intergenic | 35.0% |
| GACTTAACGATCATGGTATT+TGG | + | chr8_2:58203388-58203407 | Msa1257570:intron | 35.0% | |
| ! | AAAAGCATAACGGCAGAAAA+GGG | + | chr8_2:58203411-58203430 | Msa1257570:intron | 35.0% |
| !!! | TTCTAGTGCTGTCGTTTTTA+TGG | + | chr8_2:58203467-58203486 | Msa1257570:intron | 35.0% |
| ! | GACTATAGTTGCTTTGTTAC+AGG | + | chr8_2:58203533-58203552 | Msa1257570:intron | 35.0% |
| ATGCAATTCAACAAACTAGC+AGG | + | chr8_2:58203595-58203614 | Msa1257570:CDS | 35.0% | |
| ! | CATGGATTTTCAGTCTGAAT+AGG | + | chr8_2:58203698-58203717 | Msa1257570:intron | 35.0% |
| CTCCCCTAATAGAAAACAAA+TGG | - | chr8_2:58203847-58203866 | None:intergenic | 35.0% | |
| TGTAGCAGAAATTAGAGTAC+AGG | - | chr8_2:58203871-58203890 | None:intergenic | 35.0% | |
| ! | GTCATATTAATCGGCTTACT+TGG | + | chr8_2:58204019-58204038 | Msa1257570:CDS | 35.0% |
| !!! | TTTTCCCTTGTATTTTTGGG+TGG | + | chr8_2:58204188-58204207 | Msa1257570:three_prime_UTR | 35.0% |
| GTTATCCACCCAAAAATACA+AGG | - | chr8_2:58204196-58204215 | None:intergenic | 35.0% | |
| TTGGAAGTAGAAGACTTTAG+GGG | + | chr8_2:58204219-58204238 | Msa1257570:three_prime_UTR | 35.0% | |
| TTCATCTAGTGACTAGCATA+TGG | + | chr8_2:58204346-58204365 | Msa1257570:three_prime_UTR | 35.0% | |
| AGCATATGGTAACATCAAGT+TGG | + | chr8_2:58204360-58204379 | Msa1257570:three_prime_UTR | 35.0% | |
| TCTTTGAATTTGGCAAGTAG+CGG | + | chr8_2:58204441-58204460 | Msa1257570:three_prime_UTR | 35.0% | |
| !! | TGGTTCTTTGAATTGGTTTG+TGG | - | chr8_2:58204497-58204516 | None:intergenic | 35.0% |
| ! | TTTCAATGTGGTGGAGAAAG+TGG | - | chr8_2:58200154-58200173 | None:intergenic | 40.0% |
| CATCTCTGAGTAATTGAAGC+AGG | - | chr8_2:58200375-58200394 | None:intergenic | 40.0% | |
| TGATAGCTATGTTGCCTTCA+AGG | + | chr8_2:58200580-58200599 | Msa1257570:CDS | 40.0% | |
| ATAACATCGCAGGTAGATCT+TGG | - | chr8_2:58200904-58200923 | None:intergenic | 40.0% | |
| AAGATCTACCTGCGATGTTA+TGG | + | chr8_2:58200903-58200922 | Msa1257570:CDS | 40.0% | |
| AGATCTACCTGCGATGTTAT+GGG | + | chr8_2:58200904-58200923 | Msa1257570:CDS | 40.0% | |
| CAGTCCAAAAGATATCTCTG+CGG | + | chr8_2:58201107-58201126 | Msa1257570:CDS | 40.0% | |
| GGTATGATTATCACGCTAGT+TGG | + | chr8_2:58201134-58201153 | Msa1257570:intron | 40.0% | |
| TTGAACTAAGCAATCCCGAA+TGG | - | chr8_2:58201220-58201239 | None:intergenic | 40.0% | |
| GATTGCTTAGTTCAACAAGG+AGG | + | chr8_2:58201225-58201244 | Msa1257570:intron | 40.0% | |
| TCAGAAAATGGAAATGCCAG+TGG | + | chr8_2:58201361-58201380 | Msa1257570:CDS | 40.0% | |
| ! | GGGATATTTCAGGTAACAAG+AGG | + | chr8_2:58201480-58201499 | Msa1257570:intron | 40.0% |
| GAACATTGGGGAGAGATATA+AGG | + | chr8_2:58201699-58201718 | Msa1257570:intron | 40.0% | |
| AGAGAATTAAAAGACGACCG+GGG | + | chr8_2:58201997-58202016 | Msa1257570:intron | 40.0% | |
| TACCGCTCTCTCATATATCA+TGG | + | chr8_2:58202059-58202078 | Msa1257570:intron | 40.0% | |
| ACCGCTCTCTCATATATCAT+GGG | + | chr8_2:58202060-58202079 | Msa1257570:intron | 40.0% | |
| ACCCATGATATATGAGAGAG+CGG | - | chr8_2:58202064-58202083 | None:intergenic | 40.0% | |
| !! | GTTTGGATGGAGAGTTTTGT+AGG | + | chr8_2:58202086-58202105 | Msa1257570:intron | 40.0% |
| AGAGAATTAAAAGACGACCG+GGG | + | chr8_2:58201997-58202016 | Msa1257570:intron | 40.0% | |
| TACCGCTCTCTCATATATCA+TGG | + | chr8_2:58202059-58202078 | Msa1257570:intron | 40.0% | |
| ACCGCTCTCTCATATATCAT+GGG | + | chr8_2:58202060-58202079 | Msa1257570:intron | 40.0% | |
| ACCCATGATATATGAGAGAG+CGG | - | chr8_2:58202064-58202083 | None:intergenic | 40.0% | |
| !! | GTTTGGATGGAGAGTTTTGT+AGG | + | chr8_2:58202086-58202105 | Msa1257570:intron | 40.0% |
| !!! | GATGGAGGATTTTTTAGAGG+AGG | - | chr8_2:58202353-58202372 | None:intergenic | 40.0% |
| ! | ATACCATATAAGGGTGTGGT+AGG | - | chr8_2:58202375-58202394 | None:intergenic | 40.0% |
| ! | AAATGAGGTATCCTGTTTGG+TGG | + | chr8_2:58202429-58202448 | Msa1257570:intron | 40.0% |
| CTCTTCAAATCCCCCAATAT+TGG | + | chr8_2:58202575-58202594 | Msa1257570:intron | 40.0% | |
| ATAAGAGTCTGTTTGGTTGG+GGG | - | chr8_2:58202703-58202722 | None:intergenic | 40.0% | |
| CATAAGAGTCTGTTTGGTTG+GGG | - | chr8_2:58202704-58202723 | None:intergenic | 40.0% | |
| GGCTAACATAAGAGTCTGTT+TGG | - | chr8_2:58202710-58202729 | None:intergenic | 40.0% | |
| ATTATGGGATCATGGATCGA+AGG | - | chr8_2:58202749-58202768 | None:intergenic | 40.0% | |
| CATGATCCCATAATAGCGAT+GGG | + | chr8_2:58202755-58202774 | Msa1257570:intron | 40.0% | |
| ATGATCCCATAATAGCGATG+GGG | + | chr8_2:58202756-58202775 | Msa1257570:intron | 40.0% | |
| TCTTGTGTTGCAAAACTGTG+AGG | + | chr8_2:58202927-58202946 | Msa1257570:intron | 40.0% | |
| CGCAACTGTAAACTTGTATG+AGG | - | chr8_2:58202963-58202982 | None:intergenic | 40.0% | |
| AGTCGGGAGCAAAAATATCA+AGG | - | chr8_2:58203109-58203128 | None:intergenic | 40.0% | |
| ! | TTTTTGCTCCCGACTCTAAA+AGG | + | chr8_2:58203114-58203133 | Msa1257570:intron | 40.0% |
| !!! | AGAAAGCACCTTTTAGAGTC+GGG | - | chr8_2:58203125-58203144 | None:intergenic | 40.0% |
| !!! | CAGAAAGCACCTTTTAGAGT+CGG | - | chr8_2:58203126-58203145 | None:intergenic | 40.0% |
| !! | CTAAAAGGTGCTTTCTGAGT+TGG | + | chr8_2:58203129-58203148 | Msa1257570:intron | 40.0% |
| ! | TCTTTTGCGATCAAAGCTGA+TGG | + | chr8_2:58203318-58203337 | Msa1257570:intron | 40.0% |
| ! | GAAAAGCATAACGGCAGAAA+AGG | + | chr8_2:58203410-58203429 | Msa1257570:intron | 40.0% |
| TCATCACTTCATTGAGTCTG+CGG | + | chr8_2:58203671-58203690 | Msa1257570:intron | 40.0% | |
| CGTGAAGGCAACAAAAATCA+CGG | + | chr8_2:58203977-58203996 | Msa1257570:CDS | 40.0% | |
| AGAAGACCTAAGCATTTGCA+CGG | + | chr8_2:58204065-58204084 | Msa1257570:exon | 40.0% | |
| ATCAAACCGTGCAAATGCTT+AGG | - | chr8_2:58204074-58204093 | None:intergenic | 40.0% | |
| ! | AAGACTTTAGGGGAAGTTGT+GGG | + | chr8_2:58204229-58204248 | Msa1257570:three_prime_UTR | 40.0% |
| ! | ATGTGAACTGACTCATGCTT+TGG | + | chr8_2:58204268-58204287 | Msa1257570:three_prime_UTR | 40.0% |
| ! | TGTGAACTGACTCATGCTTT+GGG | + | chr8_2:58204269-58204288 | Msa1257570:three_prime_UTR | 40.0% |
| AGGTGAAAACAACGAATCCC+AGG | + | chr8_2:58200842-58200861 | Msa1257570:intron | 45.0% | |
| GGACGAACACAATACTTCCT+GGG | - | chr8_2:58200862-58200881 | None:intergenic | 45.0% | |
| TATTGTGTTCGTCCCAACAC+TGG | + | chr8_2:58200868-58200887 | Msa1257570:CDS | 45.0% | |
| GGCAAGACAATTCCAGTGTT+GGG | - | chr8_2:58200883-58200902 | None:intergenic | 45.0% | |
| TGGCAAGACAATTCCAGTGT+TGG | - | chr8_2:58200884-58200903 | None:intergenic | 45.0% | |
| TACCTGCGATGTTATGGGTA+CGG | + | chr8_2:58200909-58200928 | Msa1257570:intron | 45.0% | |
| ! | AGCTTCTTTTTGCGCTTGCA+TGG | - | chr8_2:58201025-58201044 | None:intergenic | 45.0% |
| CAGAGCGTAAAAACCAACGA+TGG | + | chr8_2:58201081-58201100 | Msa1257570:CDS | 45.0% | |
| ! | TTTTGGACTGACACCATCGT+TGG | - | chr8_2:58201097-58201116 | None:intergenic | 45.0% |
| CGGGATTGCTTAGTTCAACA+AGG | + | chr8_2:58201222-58201241 | Msa1257570:intron | 45.0% | |
| TATAAGGAGAGCAGAGATCC+AGG | + | chr8_2:58201715-58201734 | Msa1257570:intron | 45.0% | |
| TACAAGCTGTACCGTTCGTA+GGG | + | chr8_2:58201894-58201913 | Msa1257570:intron | 45.0% | |
| ! | CATATAAGGGTGTGGTAGGA+TGG | - | chr8_2:58202371-58202390 | None:intergenic | 45.0% |
| CATCCTACCACACCCTTATA+TGG | + | chr8_2:58202369-58202388 | Msa1257570:intron | 45.0% | |
| ! | TGTTTGGTTCAAACAAGGGG+AGG | + | chr8_2:58202394-58202413 | Msa1257570:intron | 45.0% |
| ! | GTTTGGTTCAAACAAGGGGA+GGG | + | chr8_2:58202395-58202414 | Msa1257570:intron | 45.0% |
| ! | TTTGGTTCAAACAAGGGGAG+GGG | + | chr8_2:58202396-58202415 | Msa1257570:intron | 45.0% |
| AGGGGAGGAAAGATGAAATG+AGG | + | chr8_2:58202414-58202433 | Msa1257570:intron | 45.0% | |
| TAAGAGTCTGTTTGGTTGGG+GGG | - | chr8_2:58202702-58202721 | None:intergenic | 45.0% | |
| CCATCGCTATTATGGGATCA+TGG | - | chr8_2:58202757-58202776 | None:intergenic | 45.0% | |
| CCATGATCCCATAATAGCGA+TGG | + | chr8_2:58202754-58202773 | Msa1257570:intron | 45.0% | |
| TGATCCCATAATAGCGATGG+GGG | + | chr8_2:58202757-58202776 | Msa1257570:intron | 45.0% | |
| ATTGCCCCCATCGCTATTAT+GGG | - | chr8_2:58202764-58202783 | None:intergenic | 45.0% | |
| AATTGCCCCCATCGCTATTA+TGG | - | chr8_2:58202765-58202784 | None:intergenic | 45.0% | |
| AGGCAAGAGCTCTTATCTCA+AGG | + | chr8_2:58203553-58203572 | Msa1257570:intron | 45.0% | |
| GAAGGCAACAAAAATCACGG+TGG | + | chr8_2:58203980-58203999 | Msa1257570:CDS | 45.0% | |
| GGCTTACTTGGCGTAATCAT+GGG | + | chr8_2:58204031-58204050 | Msa1257570:CDS | 45.0% | |
| GCTTACTTGGCGTAATCATG+GGG | + | chr8_2:58204032-58204051 | Msa1257570:CDS | 45.0% | |
| CCACAATTGCTTGAACAGTG+AGG | - | chr8_2:58204121-58204140 | None:intergenic | 45.0% | |
| CCTCACTGTTCAAGCAATTG+TGG | + | chr8_2:58204118-58204137 | Msa1257570:three_prime_UTR | 45.0% | |
| ! | GAAGACTTTAGGGGAAGTTG+TGG | + | chr8_2:58204228-58204247 | Msa1257570:three_prime_UTR | 45.0% |
| GGTCAAAACGACCACAATTC+AGG | + | chr8_2:58204381-58204400 | Msa1257570:three_prime_UTR | 45.0% | |
| CTGAGAGAGTTCCTGAATTG+TGG | - | chr8_2:58204395-58204414 | None:intergenic | 45.0% | |
| CACAATTCAGGAACTCTCTC+AGG | + | chr8_2:58204393-58204412 | Msa1257570:three_prime_UTR | 45.0% | |
| !! | AAAATTATAAAATTCATATT+TGG | - | chr8_2:58203045-58203064 | None:intergenic | 5.0% |
| TACTCAGAGATGAGTCCCGA+TGG | + | chr8_2:58200383-58200402 | Msa1257570:exon | 50.0% | |
| ATGCTGAGGAGATCACCATC+GGG | - | chr8_2:58200401-58200420 | None:intergenic | 50.0% | |
| GATGCTGAGGAGATCACCAT+CGG | - | chr8_2:58200402-58200421 | None:intergenic | 50.0% | |
| GGGACGAACACAATACTTCC+TGG | - | chr8_2:58200863-58200882 | None:intergenic | 50.0% | |
| ATCCGTACCCATAACATCGC+AGG | - | chr8_2:58200914-58200933 | None:intergenic | 50.0% | |
| TCCAGCCGATATGCAATGCA+AGG | + | chr8_2:58201044-58201063 | Msa1257570:CDS | 50.0% | |
| TCCTTGCATTGCATATCGGC+TGG | - | chr8_2:58201048-58201067 | None:intergenic | 50.0% | |
| GCTTAGTTCAACAAGGAGGC+AGG | + | chr8_2:58201229-58201248 | Msa1257570:intron | 50.0% | |
| ! | CGAGGAGTGCAAATTGAGAG+TGG | + | chr8_2:58201261-58201280 | Msa1257570:CDS | 50.0% |
| !! | TCCCAGAAGGTTCTGAGGAA+GGG | + | chr8_2:58201317-58201336 | Msa1257570:CDS | 50.0% |
| ACCCTTCCTCAGAACCTTCT+GGG | - | chr8_2:58201321-58201340 | None:intergenic | 50.0% | |
| TTGTGCGAATTCAGGACCAC+TGG | - | chr8_2:58201380-58201399 | None:intergenic | 50.0% | |
| TGGTCCTGAATTCGCACAAG+TGG | + | chr8_2:58201381-58201400 | Msa1257570:intron | 50.0% | |
| GGTCCTGAATTCGCACAAGT+GGG | + | chr8_2:58201382-58201401 | Msa1257570:intron | 50.0% | |
| GCAGATTTGTCTTGAGCCAC+AGG | - | chr8_2:58201519-58201538 | None:intergenic | 50.0% | |
| GGCTCAAGACAAATCTGCAG+AGG | + | chr8_2:58201521-58201540 | Msa1257570:CDS | 50.0% | |
| CTACAAGCTGTACCGTTCGT+AGG | + | chr8_2:58201893-58201912 | Msa1257570:intron | 50.0% | |
| ! | ATAAGGGTGTGGTAGGATGG+AGG | - | chr8_2:58202368-58202387 | None:intergenic | 50.0% |
| ! | TGAGGTATCCTGTTTGGTGG+AGG | + | chr8_2:58202432-58202451 | Msa1257570:intron | 50.0% |
| ! | GAGGTATCCTGTTTGGTGGA+GGG | + | chr8_2:58202433-58202452 | Msa1257570:intron | 50.0% |
| ! | AGGTATCCTGTTTGGTGGAG+GGG | + | chr8_2:58202434-58202453 | Msa1257570:intron | 50.0% |
| TTTGGTTGGGGGGAAATGGA+GGG | - | chr8_2:58202692-58202711 | None:intergenic | 50.0% | |
| TCTGTTTGGTTGGGGGGAAA+TGG | - | chr8_2:58202696-58202715 | None:intergenic | 50.0% | |
| ! | GATCGAAGGTACGACTTGAG+GGG | - | chr8_2:58202735-58202754 | None:intergenic | 50.0% |
| ! | GGATCGAAGGTACGACTTGA+GGG | - | chr8_2:58202736-58202755 | None:intergenic | 50.0% |
| ! | TGGATCGAAGGTACGACTTG+AGG | - | chr8_2:58202737-58202756 | None:intergenic | 50.0% |
| AGTGAATCCTCACCAGTTCC+TGG | - | chr8_2:58203626-58203645 | None:intergenic | 50.0% | |
| CATTGAGTCTGCGGTCTTCA+TGG | + | chr8_2:58203680-58203699 | Msa1257570:intron | 50.0% | |
| CGGCTTACTTGGCGTAATCA+TGG | + | chr8_2:58204030-58204049 | Msa1257570:CDS | 50.0% | |
| GTTCGAGAGGTTCGATGCTG+AGG | - | chr8_2:58200415-58200434 | None:intergenic | 55.0% | |
| CAGGGGAACTTGAGTTCGAG+AGG | - | chr8_2:58200428-58200447 | None:intergenic | 55.0% | |
| CAACAAGGAGGCAGGACATG+TGG | + | chr8_2:58201237-58201256 | Msa1257570:CDS | 55.0% | |
| !! | GAACCTTCTGGGACTGGAGA+TGG | - | chr8_2:58201310-58201329 | None:intergenic | 55.0% |
| TCCAGTCCCAGAAGGTTCTG+AGG | + | chr8_2:58201312-58201331 | Msa1257570:CDS | 55.0% | |
| !! | TCCTCAGAACCTTCTGGGAC+TGG | - | chr8_2:58201316-58201335 | None:intergenic | 55.0% |
| !! | GTCCCAGAAGGTTCTGAGGA+AGG | + | chr8_2:58201316-58201335 | Msa1257570:CDS | 55.0% |
| GACCCTTCCTCAGAACCTTC+TGG | - | chr8_2:58201322-58201341 | None:intergenic | 55.0% | |
| GGACCCACTTGTGCGAATTC+AGG | - | chr8_2:58201388-58201407 | None:intergenic | 55.0% | |
| AGGATCTGCTGAACGACCTG+TGG | + | chr8_2:58201500-58201519 | Msa1257570:CDS | 55.0% | |
| GAGATGAGAGTGGGGAGAGA+AGG | + | chr8_2:58201824-58201843 | Msa1257570:intron | 55.0% | |
| ! | GTCGATGTCTTTTCTCGCCC+CGG | - | chr8_2:58202017-58202036 | None:intergenic | 55.0% |
| ! | GTCGATGTCTTTTCTCGCCC+CGG | - | chr8_2:58202017-58202036 | None:intergenic | 55.0% |
| AATGCTCCCCTCCACCAAAC+AGG | - | chr8_2:58202443-58202462 | None:intergenic | 55.0% | |
| !! | TGGTGGAGGGGAGCATTTCA+AGG | + | chr8_2:58202446-58202465 | Msa1257570:intron | 55.0% |
| !! | GGTGGAGGGGAGCATTTCAA+GGG | + | chr8_2:58202447-58202466 | Msa1257570:intron | 55.0% |
| !! | GAGGGGAGCATTTCAAGGGA+GGG | + | chr8_2:58202451-58202470 | Msa1257570:intron | 55.0% |
| GTTTGGTTGGGGGGAAATGG+AGG | - | chr8_2:58202693-58202712 | None:intergenic | 55.0% | |
| ! | GAAGGTACGACTTGAGGGGT+TGG | - | chr8_2:58202731-58202750 | None:intergenic | 55.0% |
| GAATCCTCACCAGTTCCTGG+CGG | - | chr8_2:58203623-58203642 | None:intergenic | 55.0% | |
| TAGGAGCTGCTGAAGCGTGA+AGG | + | chr8_2:58203962-58203981 | Msa1257570:intron | 55.0% | |
| ! | ACTGGAGATGGTGGTTGCGG+CGG | - | chr8_2:58201298-58201317 | None:intergenic | 60.0% |
| ! | GGGACTGGAGATGGTGGTTG+CGG | - | chr8_2:58201301-58201320 | None:intergenic | 60.0% |
| !! | CCTTCTGGGACTGGAGATGG+TGG | - | chr8_2:58201307-58201326 | None:intergenic | 60.0% |
| CCACCATCTCCAGTCCCAGA+AGG | + | chr8_2:58201304-58201323 | Msa1257570:CDS | 60.0% | |
| GAGGAAGGGTCATCCCCTAG+AGG | + | chr8_2:58201331-58201350 | Msa1257570:CDS | 60.0% | |
| GGTTCAAACAAGGGGAGGGG+AGG | + | chr8_2:58202399-58202418 | Msa1257570:intron | 60.0% | |
| !! | GGAGGGGAGCATTTCAAGGG+AGG | + | chr8_2:58202450-58202469 | Msa1257570:intron | 60.0% |
| GGGGGAAATGGAGGGAAGGA+AGG | - | chr8_2:58202684-58202703 | None:intergenic | 60.0% | |
| GTTGGGGGGAAATGGAGGGA+AGG | - | chr8_2:58202688-58202707 | None:intergenic | 60.0% | |
| ACAAACTAGCAGGCTCCGCC+AGG | + | chr8_2:58203605-58203624 | Msa1257570:CDS | 60.0% | |
| GGAGGCAGGACATGTGGTCG+AGG | + | chr8_2:58201243-58201262 | Msa1257570:CDS | 65.0% | |
| TAGCAGGCTCCGCCAGGAAC+TGG | + | chr8_2:58203611-58203630 | Msa1257570:CDS | 65.0% | |
| GGCTCCGCCAGGAACTGGTG+AGG | + | chr8_2:58203616-58203635 | Msa1257570:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 58200060 | 58204544 | 58200060 | ID=Msa1257570;Name=Msa1257570 |
| chr8_2 | mRNA | 58200060 | 58204544 | 58200060 | ID=Msa1257570-mRNA-1;Parent=Msa1257570;Name=Msa1257570-mRNA-1;_AED=0.00;_eAED=0.00;_QI=332|1|1|1|1|1|8|469|242 |
| chr8_2 | exon | 58200060 | 58200446 | 58200060 | ID=Msa1257570-mRNA-1:exon:18039;Parent=Msa1257570-mRNA-1 |
| chr8_2 | exon | 58200531 | 58200601 | 58200531 | ID=Msa1257570-mRNA-1:exon:18040;Parent=Msa1257570-mRNA-1 |
| chr8_2 | exon | 58200844 | 58200925 | 58200844 | ID=Msa1257570-mRNA-1:exon:18041;Parent=Msa1257570-mRNA-1 |
| chr8_2 | exon | 58201019 | 58201134 | 58201019 | ID=Msa1257570-mRNA-1:exon:18042;Parent=Msa1257570-mRNA-1 |
| chr8_2 | exon | 58201235 | 58201399 | 58201235 | ID=Msa1257570-mRNA-1:exon:18043;Parent=Msa1257570-mRNA-1 |
| chr8_2 | exon | 58201492 | 58201542 | 58201492 | ID=Msa1257570-mRNA-1:exon:18044;Parent=Msa1257570-mRNA-1 |
| chr8_2 | exon | 58203555 | 58203632 | 58203555 | ID=Msa1257570-mRNA-1:exon:18045;Parent=Msa1257570-mRNA-1 |
| chr8_2 | exon | 58203965 | 58204544 | 58203965 | ID=Msa1257570-mRNA-1:exon:18046;Parent=Msa1257570-mRNA-1 |
| chr8_2 | five_prime_UTR | 58200060 | 58200391 | 58200060 | ID=Msa1257570-mRNA-1:five_prime_utr;Parent=Msa1257570-mRNA-1 |
| chr8_2 | CDS | 58200392 | 58200446 | 58200392 | ID=Msa1257570-mRNA-1:cds;Parent=Msa1257570-mRNA-1 |
| chr8_2 | CDS | 58200531 | 58200601 | 58200531 | ID=Msa1257570-mRNA-1:cds;Parent=Msa1257570-mRNA-1 |
| chr8_2 | CDS | 58200844 | 58200925 | 58200844 | ID=Msa1257570-mRNA-1:cds;Parent=Msa1257570-mRNA-1 |
| chr8_2 | CDS | 58201019 | 58201134 | 58201019 | ID=Msa1257570-mRNA-1:cds;Parent=Msa1257570-mRNA-1 |
| chr8_2 | CDS | 58201235 | 58201399 | 58201235 | ID=Msa1257570-mRNA-1:cds;Parent=Msa1257570-mRNA-1 |
| chr8_2 | CDS | 58201492 | 58201542 | 58201492 | ID=Msa1257570-mRNA-1:cds;Parent=Msa1257570-mRNA-1 |
| chr8_2 | CDS | 58203555 | 58203632 | 58203555 | ID=Msa1257570-mRNA-1:cds;Parent=Msa1257570-mRNA-1 |
| chr8_2 | CDS | 58203965 | 58204075 | 58203965 | ID=Msa1257570-mRNA-1:cds;Parent=Msa1257570-mRNA-1 |
| chr8_2 | three_prime_UTR | 58204076 | 58204544 | 58204076 | ID=Msa1257570-mRNA-1:three_prime_utr;Parent=Msa1257570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
