Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0794840 | sp|Q9ZNU6|DET1_SOLLC | 74.610 | 449 | 85 | 4 | 226 | 671 | 25 | 447 | 0.0 | 690 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0794840 | A0A072UDA3 | 95.556 | 450 | 4 | 2 | 226 | 672 | 28 | 464 | 0.0 | 886 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0119320 | Msa0794840 | 0.839272 | 1.749939e-57 | -8.615850e-47 |
| Msa0621240 | Msa0794840 | 0.808292 | 3.327664e-50 | -8.615850e-47 |
| Msa0712020 | Msa0794840 | 0.844912 | 5.635230e-59 | -8.615850e-47 |
| Msa0716860 | Msa0794840 | 0.800473 | 1.417702e-48 | -8.615850e-47 |
| Msa0750000 | Msa0794840 | 0.815517 | 8.876592e-52 | -8.615850e-47 |
| Msa0750250 | Msa0794840 | 0.806755 | 7.052258e-50 | -8.615850e-47 |
| Msa0794840 | Msa1171760 | 0.820094 | 8.223784e-53 | -8.615850e-47 |
| Msa0794840 | Msa1422840 | 0.816396 | 5.650594e-52 | -8.615850e-47 |
| Msa0794840 | Msa1433220 | 0.809788 | 1.591343e-50 | -8.615850e-47 |
| Msa0138210 | Msa0794840 | 0.805986 | 1.024316e-49 | -8.615850e-47 |
| Msa0194720 | Msa0794840 | 0.807637 | 4.586542e-50 | -8.615850e-47 |
| Msa0227230 | Msa0794840 | 0.805361 | 1.385418e-49 | -8.615850e-47 |
| Msa0229940 | Msa0794840 | 0.827331 | 1.659660e-54 | -8.615850e-47 |
| Msa0388650 | Msa0794840 | 0.808138 | 3.588891e-50 | -8.615850e-47 |
| Msa0417730 | Msa0794840 | 0.801238 | 9.896430e-49 | -8.615850e-47 |
| Msa0442310 | Msa0794840 | 0.812493 | 4.123151e-51 | -8.615850e-47 |
| Msa0277420 | Msa0794840 | 0.809112 | 2.222955e-50 | -8.615850e-47 |
| Msa0301810 | Msa0794840 | 0.800012 | 1.759479e-48 | -8.615850e-47 |
| Msa0511330 | Msa0794840 | 0.809935 | 1.479306e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0794840 | MtrunA17_Chr5g0396271 | 95.111 | 450 | 6 | 2 | 226 | 672 | 28 | 464 | 0.0 | 884 |
| Msa0794840 | MtrunA17_Chr5g0396421 | 98.238 | 227 | 4 | 0 | 1 | 227 | 1 | 227 | 1.94e-157 | 463 |
| Msa0794840 | MtrunA17_Chr8g0389821 | 45.847 | 301 | 140 | 6 | 27 | 309 | 27 | 322 | 4.73e-74 | 247 |
| Msa0794840 | MtrunA17_Chr8g0340741 | 56.769 | 229 | 96 | 2 | 1 | 227 | 1 | 228 | 1.01e-70 | 238 |
| Msa0794840 | MtrunA17_Chr6g0487071 | 53.807 | 197 | 89 | 1 | 33 | 227 | 31 | 227 | 1.94e-65 | 224 |
| Msa0794840 | MtrunA17_Chr1g0156571 | 50.495 | 202 | 98 | 1 | 28 | 227 | 30 | 231 | 1.20e-54 | 194 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0794840 | AT4G10180.1 | 68.113 | 461 | 122 | 6 | 223 | 672 | 22 | 468 | 0.0 | 619 |
| Msa0794840 | AT1G50460.2 | 67.157 | 204 | 66 | 1 | 25 | 227 | 25 | 228 | 1.22e-87 | 279 |
| Msa0794840 | AT1G50460.1 | 67.157 | 204 | 66 | 1 | 25 | 227 | 25 | 228 | 2.70e-86 | 280 |
| Msa0794840 | AT3G20040.1 | 61.572 | 229 | 86 | 1 | 1 | 227 | 1 | 229 | 9.88e-84 | 273 |
| Msa0794840 | AT4G29130.1 | 59.389 | 229 | 91 | 1 | 1 | 227 | 1 | 229 | 1.89e-76 | 253 |
| Msa0794840 | AT2G19860.1 | 59.825 | 229 | 90 | 1 | 1 | 227 | 1 | 229 | 3.69e-76 | 253 |
| Msa0794840 | AT1G47840.2 | 51.832 | 191 | 89 | 1 | 40 | 227 | 43 | 233 | 9.62e-55 | 192 |
| Msa0794840 | AT1G47840.1 | 51.832 | 191 | 89 | 1 | 40 | 227 | 43 | 233 | 1.15e-53 | 192 |
| Msa0794840 | AT1G50460.3 | 62.500 | 136 | 50 | 1 | 93 | 227 | 17 | 152 | 1.31e-46 | 171 |
| Msa0794840 | AT2G19860.2 | 54.622 | 119 | 52 | 1 | 111 | 227 | 2 | 120 | 4.80e-29 | 120 |
| Msa0794840 | AT4G37840.1 | 31.953 | 169 | 110 | 3 | 21 | 185 | 21 | 188 | 4.68e-18 | 88.2 |
Find 160 sgRNAs with CRISPR-Local
Find 526 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATACACATTCTTCAAATT+AGG | 0.141498 | 5_3:+6759095 | Msa0794840:CDS |
| CAGCAGGTGCATCATGAATT+TGG | 0.148535 | 5_3:-6758792 | None:intergenic |
| TGTTAACTTGACCCATAATA+TGG | 0.162736 | 5_3:+6759021 | Msa0794840:CDS |
| ATTACGTTGATCTGATTATT+TGG | 0.209027 | 5_3:+6760653 | Msa0794840:CDS |
| CATTCATATTCCAGGGAATA+TGG | 0.217448 | 5_3:+6759462 | Msa0794840:CDS |
| TACATGGAGGGTAATCAATT+TGG | 0.221153 | 5_3:+6758748 | Msa0794840:CDS |
| AAATCACGTGCAGCCTAATA+TGG | 0.236617 | 5_3:+6759400 | Msa0794840:CDS |
| ACAAGAAGACACCCATATTA+TGG | 0.250665 | 5_3:-6759033 | None:intergenic |
| ATCAAGAGTTGATTGTTTAT+AGG | 0.268678 | 5_3:+6758575 | Msa0794840:CDS |
| TCCTTGGCAGGTGCAATTCT+TGG | 0.269789 | 5_3:+6760809 | Msa0794840:intron |
| CATATTATGCGCTGCATCTT+GGG | 0.273264 | 5_3:+6755967 | Msa0794840:CDS |
| GGTTTCTGCTGAAACTTATA+AGG | 0.275889 | 5_3:-6758552 | None:intergenic |
| TATACACATTCTTCAAATTA+GGG | 0.282871 | 5_3:+6759096 | Msa0794840:CDS |
| TCGGCGATTCTATGAAAATT+TGG | 0.290527 | 5_3:+6758456 | Msa0794840:CDS |
| AAAACTTGTTCCGAAGTCTT+TGG | 0.299663 | 5_3:-6760615 | None:intergenic |
| CTTGTTGACGTTCGTGCTAT+TGG | 0.301845 | 5_3:+6759130 | Msa0794840:CDS |
| ATTCTTCAAATTAGGGATTC+TGG | 0.313807 | 5_3:+6759103 | Msa0794840:CDS |
| TTGTTGACGTTCGTGCTATT+GGG | 0.314509 | 5_3:+6759131 | Msa0794840:CDS |
| GAAACAGACATTTGTTTCAT+AGG | 0.324581 | 5_3:-6756312 | None:intergenic |
| TGCTGTTGGAGGAGCTGTCC+AGG | 0.326769 | 5_3:+6758810 | Msa0794840:CDS |
| CTCTGTGACTGACAGCTAAA+AGG | 0.332022 | 5_3:-6761999 | None:intergenic |
| CCATATTATGCGCTGCATCT+TGG | 0.333001 | 5_3:+6755966 | Msa0794840:CDS |
| CCAAGATGCAGCGCATAATA+TGG | 0.343745 | 5_3:-6755966 | None:intergenic |
| CAGGAAGCATTTGCACGAAA+TGG | 0.346216 | 5_3:+6756571 | Msa0794840:CDS |
| ATTAAGTTTGGCAGCGTAGA+TGG | 0.349725 | 5_3:+6760849 | Msa0794840:CDS |
| CACCACTTGCTAATTAAGTT+TGG | 0.352258 | 5_3:+6760837 | Msa0794840:CDS |
| GGTGGCGGCGTGTGCGGTGG+CGG | 0.355755 | 5_3:+6754510 | Msa0794840:CDS |
| TTAACAAACTCCGGTGAAAC+GGG | 0.357615 | 5_3:-6754293 | None:intergenic |
| TATAAACAATCAACTCTTGA+TGG | 0.361899 | 5_3:-6758573 | None:intergenic |
| AGATGTTGCAGCATGTTTGC+AGG | 0.362698 | 5_3:+6756552 | Msa0794840:CDS |
| CCTTCTGTCCTGTGAAGTAT+TGG | 0.373474 | 5_3:-6756265 | None:intergenic |
| ATTGCTTTCATTCATATTCC+AGG | 0.377196 | 5_3:+6759454 | Msa0794840:CDS |
| TGATTGTTTATAGGCCTAGA+TGG | 0.392331 | 5_3:+6758584 | Msa0794840:CDS |
| CTTCTTGTATGATGATCTAT+TGG | 0.394877 | 5_3:+6759048 | Msa0794840:CDS |
| AGCAGGTGCATCATGAATTT+GGG | 0.407016 | 5_3:-6758791 | None:intergenic |
| TTTAACAAACTCCGGTGAAA+CGG | 0.420451 | 5_3:-6754294 | None:intergenic |
| GACGGCGACGGTGGCGGTGG+CGG | 0.428913 | 5_3:+6754495 | Msa0794840:CDS |
| CAAGAAGACACCCATATTAT+GGG | 0.433392 | 5_3:-6759032 | None:intergenic |
| GTTAACTTGACCCATAATAT+GGG | 0.436025 | 5_3:+6759022 | Msa0794840:CDS |
| TACTGAAGACTTTCTTATCC+AGG | 0.437734 | 5_3:-6758991 | None:intergenic |
| TATATGTTGTTTGAGCAGTT+TGG | 0.440396 | 5_3:+6761692 | Msa0794840:CDS |
| TTTCTTCATTCCATATTCCC+TGG | 0.440713 | 5_3:-6759472 | None:intergenic |
| GGGAGTGACGGCGACGGTGG+CGG | 0.445488 | 5_3:+6754489 | Msa0794840:CDS |
| TAAAGATTTCTTTCTTTACA+TGG | 0.446690 | 5_3:+6758732 | Msa0794840:CDS |
| GGCGGCGTGTGCGGTGGCGG+CGG | 0.449757 | 5_3:+6754513 | Msa0794840:CDS |
| GAAACAAATGTCTGTTTCCT+CGG | 0.450286 | 5_3:+6756317 | Msa0794840:CDS |
| GAGTGAAGAGTAGAAGAAAG+TGG | 0.451502 | 5_3:+6754551 | Msa0794840:CDS |
| GAAGATGGGAAGAGTGGTAG+TGG | 0.452894 | 5_3:+6754468 | Msa0794840:exon |
| TTCTTTCGGTGAGAAATCTT+CGG | 0.455726 | 5_3:+6754400 | Msa0794840:five_prime_UTR |
| AATGGAAGATGGAGAGATCC+TGG | 0.457276 | 5_3:+6758973 | Msa0794840:CDS |
| ACCACCTTCAGAAGCTAAAC+CGG | 0.457674 | 5_3:-6754674 | None:intergenic |
| AATCACGTGCAGCCTAATAT+GGG | 0.458268 | 5_3:+6759401 | Msa0794840:CDS |
| TGGACTGTTTGCCACTTCTA+CGG | 0.460981 | 5_3:+6758768 | Msa0794840:CDS |
| AAAGAAAGAAGGGGCGGCTC+CGG | 0.461070 | 5_3:-6754203 | None:intergenic |
| GATCAACGTAATCTTGAAAG+TGG | 0.464835 | 5_3:-6760642 | None:intergenic |
| ATACGAGTGTTGAAAGGTTA+AGG | 0.464876 | 5_3:+6754617 | Msa0794840:CDS |
| TCACAGGACAGAAGGGAACT+TGG | 0.465295 | 5_3:+6756273 | Msa0794840:CDS |
| ATCTTCGGAGAGTGGGAAAA+CGG | 0.465385 | 5_3:+6754415 | Msa0794840:five_prime_UTR |
| GGTGGCGGTGGCGGCGTGTG+CGG | 0.466342 | 5_3:+6754504 | Msa0794840:CDS |
| AGTGACGGCGACGGTGGCGG+TGG | 0.467501 | 5_3:+6754492 | Msa0794840:CDS |
| GAATTCATTGCTAAAGAAGA+TGG | 0.471311 | 5_3:+6756240 | Msa0794840:CDS |
| GTTTGATCGATCGGTGAAGA+TGG | 0.474834 | 5_3:+6754453 | Msa0794840:exon |
| AAACAGACATTTGTTTCATA+GGG | 0.475582 | 5_3:-6756311 | None:intergenic |
| AATTTACGAAATGAATGGTC+TGG | 0.477507 | 5_3:-6758511 | None:intergenic |
| GGCGGTGGCGGCGTGTGCGG+TGG | 0.477522 | 5_3:+6754507 | Msa0794840:CDS |
| ATTATATTTAGAATGGAAGA+TGG | 0.478790 | 5_3:+6758962 | Msa0794840:intron |
| AACTCCGGTGAAACGGGAAA+CGG | 0.486811 | 5_3:-6754287 | None:intergenic |
| TTATATACAGCAACAAAAGC+TGG | 0.488795 | 5_3:-6761518 | None:intergenic |
| AGAACAGCTACGGAGCATAA+AGG | 0.489639 | 5_3:+6761793 | Msa0794840:CDS |
| AGGCAGCTACATGCACATCT+AGG | 0.489720 | 5_3:-6756594 | None:intergenic |
| AAAAGAGACTGGTCAAAGTA+AGG | 0.490331 | 5_3:-6762029 | None:intergenic |
| ACCTCATATATTGTGTAACT+TGG | 0.492060 | 5_3:-6758481 | None:intergenic |
| AGATGAGAAAGCACCTCAAA+AGG | 0.494033 | 5_3:-6758864 | None:intergenic |
| GATTTCTTTCTTTACATGGA+GGG | 0.495054 | 5_3:+6758736 | Msa0794840:CDS |
| TTTCGTAAATTCACAGAGGA+TGG | 0.495680 | 5_3:+6758523 | Msa0794840:CDS |
| TTGTTGCGTGCATGATAAAA+CGG | 0.510312 | 5_3:+6754370 | Msa0794840:five_prime_UTR |
| AGTAAACCTTATCATCAAAC+CGG | 0.511427 | 5_3:-6762052 | None:intergenic |
| GCTACGGAGCATAAAGGATA+AGG | 0.511863 | 5_3:+6761799 | Msa0794840:CDS |
| GTAACGCGGGTTCATTTAAG+TGG | 0.515646 | 5_3:+6756005 | Msa0794840:CDS |
| CTGTGAATTTACGAAATGAA+TGG | 0.515785 | 5_3:-6758516 | None:intergenic |
| TCCTTGACGTTACATGAAAG+TGG | 0.516018 | 5_3:-6761718 | None:intergenic |
| CGTTGATCTGATTATTTGGA+AGG | 0.517396 | 5_3:+6760657 | Msa0794840:CDS |
| TGTTGACGTTCGTGCTATTG+GGG | 0.519492 | 5_3:+6759132 | Msa0794840:CDS |
| ATATTATGCGCTGCATCTTG+GGG | 0.519770 | 5_3:+6755968 | Msa0794840:CDS |
| TACTTTCTCTCTCTTACCGC+CGG | 0.519777 | 5_3:+6754240 | Msa0794840:five_prime_UTR |
| AAACAAATGTCTGTTTCCTC+GGG | 0.521874 | 5_3:+6756318 | Msa0794840:CDS |
| CCGCCGGAAAATTAAATCTC+CGG | 0.522174 | 5_3:+6754256 | Msa0794840:five_prime_UTR |
| AAGGCAAGTGGTTGATGCTA+TGG | 0.522670 | 5_3:+6754636 | Msa0794840:CDS |
| AGATGTGCATGTAGCTGCCT+TGG | 0.522932 | 5_3:+6756597 | Msa0794840:CDS |
| ATGAATTTGGGCCGTAGAAG+TGG | 0.522935 | 5_3:-6758779 | None:intergenic |
| ATGTTGATAATCTTCCTAAC+GGG | 0.524290 | 5_3:+6754722 | Msa0794840:CDS |
| GCCAAGTTACACAATATATG+AGG | 0.525062 | 5_3:+6758480 | Msa0794840:CDS |
| ATTCATGATGCACCTGCTGT+TGG | 0.525370 | 5_3:+6758796 | Msa0794840:CDS |
| AGACATTTGTTTCATAGGGA+AGG | 0.529304 | 5_3:-6756307 | None:intergenic |
| GCTGTTGGAGGAGCTGTCCA+GGG | 0.536533 | 5_3:+6758811 | Msa0794840:CDS |
| CATCAAACCGGAAAAGAGAC+TGG | 0.536809 | 5_3:-6762040 | None:intergenic |
| CTCTACTTCATGCTCAAGGA+CGG | 0.537992 | 5_3:-6756039 | None:intergenic |
| CCAATACTTCACAGGACAGA+AGG | 0.538946 | 5_3:+6756265 | Msa0794840:CDS |
| CTTGTGCCAGTCATTAGATG+TGG | 0.540300 | 5_3:-6756077 | None:intergenic |
| TTGCTTTCATTCATATTCCA+GGG | 0.544596 | 5_3:+6759455 | Msa0794840:CDS |
| AGTGGGAGTGACGGCGACGG+TGG | 0.547039 | 5_3:+6754486 | Msa0794840:CDS |
| AGTGGGAAAACGGCGTCGTA+CGG | 0.547183 | 5_3:+6754425 | Msa0794840:five_prime_UTR |
| GACTGGTCAAAGTAAGGAGA+AGG | 0.548689 | 5_3:-6762023 | None:intergenic |
| TAGACAAGTAAACTAGTATG+TGG | 0.549401 | 5_3:-6762075 | None:intergenic |
| GCCGGTTTAGCTTCTGAAGG+TGG | 0.550536 | 5_3:+6754673 | Msa0794840:CDS |
| CATGATGCACCTGCTGTTGG+AGG | 0.551452 | 5_3:+6758799 | Msa0794840:CDS |
| TATGTTGATAATCTTCCTAA+CGG | 0.553392 | 5_3:+6754721 | Msa0794840:CDS |
| TGGACAGCTCCTCCAACAGC+AGG | 0.556623 | 5_3:-6758808 | None:intergenic |
| ATTTACGAAATGAATGGTCT+GGG | 0.561474 | 5_3:-6758510 | None:intergenic |
| ACCAGAGGATCCAAAGACTT+CGG | 0.562815 | 5_3:+6760605 | Msa0794840:intron |
| TTTGATCGATCGGTGAAGAT+GGG | 0.566547 | 5_3:+6754454 | Msa0794840:exon |
| TCTACTTCATGCTCAAGGAC+GGG | 0.569738 | 5_3:-6756038 | None:intergenic |
| AGTTTGGCAGCGTAGATGGA+GGG | 0.569913 | 5_3:+6760853 | Msa0794840:CDS |
| GGTGAGAAATCTTCGGAGAG+TGG | 0.572421 | 5_3:+6754407 | Msa0794840:five_prime_UTR |
| GTGAGAAATCTTCGGAGAGT+GGG | 0.574804 | 5_3:+6754408 | Msa0794840:five_prime_UTR |
| TAAGGCAAGCAATTCTTCAC+AGG | 0.575187 | 5_3:+6761817 | Msa0794840:CDS |
| GTTTGGCAGCGTAGATGGAG+GGG | 0.576590 | 5_3:+6760854 | Msa0794840:CDS |
| GTGTTGAAAGAGTTTGAAGA+AGG | 0.576656 | 5_3:+6754589 | Msa0794840:CDS |
| GTCGCTCTACTTCATGCTCA+AGG | 0.578601 | 5_3:-6756043 | None:intergenic |
| TCATGCTCAAGGACGGGAGA+TGG | 0.579799 | 5_3:-6756032 | None:intergenic |
| TGAAGAAACAGATGATACCT+TGG | 0.580472 | 5_3:+6759487 | Msa0794840:CDS |
| GCTTGCAGGTTCATCATGCT+CGG | 0.580715 | 5_3:+6758437 | Msa0794840:intron |
| TGTTGAAAGGTTAAGGCAAG+TGG | 0.581207 | 5_3:+6754624 | Msa0794840:CDS |
| TTGTGCCAGTCATTAGATGT+GGG | 0.585935 | 5_3:-6756076 | None:intergenic |
| AAGATGGGAAGAGTGGTAGT+GGG | 0.588287 | 5_3:+6754469 | Msa0794840:exon |
| CACGCCGGTTTAGCTTCTGA+AGG | 0.591635 | 5_3:+6754670 | Msa0794840:CDS |
| AGATGGTTCCAATACTTCAC+AGG | 0.592323 | 5_3:+6756257 | Msa0794840:CDS |
| TGATTCGATTTAACAAACTC+CGG | 0.594125 | 5_3:-6754302 | None:intergenic |
| GTGACTAACCATATCTACAA+TGG | 0.594940 | 5_3:-6756370 | None:intergenic |
| GTTAGGAAGATTATCAACAT+AGG | 0.595626 | 5_3:-6754719 | None:intergenic |
| AGTGGTTGATGCTATGGCGG+TGG | 0.596296 | 5_3:+6754642 | Msa0794840:CDS |
| GTTGTGATACGAGTGTTGAA+AGG | 0.598436 | 5_3:+6754611 | Msa0794840:CDS |
| TTCATGCACTAGAACAGCTA+CGG | 0.600561 | 5_3:+6761783 | Msa0794840:CDS |
| TATTGGCAATTGTATCACTT+CGG | 0.606826 | 5_3:+6759065 | Msa0794840:CDS |
| AAGTTTGGCAGCGTAGATGG+AGG | 0.610453 | 5_3:+6760852 | Msa0794840:CDS |
| ACTTAATTAGCAAGTGGTGT+CGG | 0.614406 | 5_3:-6760833 | None:intergenic |
| ACGGGAAACGGAAAACTCGC+CGG | 0.614599 | 5_3:-6754275 | None:intergenic |
| TCAGCATTTCTTGATACCTG+AGG | 0.614999 | 5_3:-6761488 | None:intergenic |
| ACGGATGTAGTTTGATCGAT+CGG | 0.615773 | 5_3:+6754444 | Msa0794840:five_prime_UTR |
| GTGCCAGTCATTAGATGTGG+GGG | 0.615915 | 5_3:-6756074 | None:intergenic |
| TGCCAAACTTAATTAGCAAG+TGG | 0.620048 | 5_3:-6760839 | None:intergenic |
| TCTAATGACTGGCACAAGCA+AGG | 0.620748 | 5_3:+6756082 | Msa0794840:CDS |
| CTGACAGCTAAAAGGCAAAG+AGG | 0.622236 | 5_3:-6761991 | None:intergenic |
| ATCGGTGAAGATGGGAAGAG+TGG | 0.624776 | 5_3:+6754462 | Msa0794840:exon |
| AAGAGTGGTAGTGGGAGTGA+CGG | 0.625333 | 5_3:+6754477 | Msa0794840:CDS |
| CAATACTTCACAGGACAGAA+GGG | 0.631867 | 5_3:+6756266 | Msa0794840:CDS |
| ACCACTTTCATGTAACGTCA+AGG | 0.632278 | 5_3:+6761717 | Msa0794840:CDS |
| AGATTTCTTTCTTTACATGG+AGG | 0.632636 | 5_3:+6758735 | Msa0794840:CDS |
| CAATAGCACGAACGTCAACA+AGG | 0.638846 | 5_3:-6759129 | None:intergenic |
| AGTTCATTGCAAGAAGCAAG+TGG | 0.641727 | 5_3:-6758703 | None:intergenic |
| ATACAGCAACAAAAGCTGGA+TGG | 0.642705 | 5_3:-6761514 | None:intergenic |
| ATGGCGGTGGAGATGCACGC+CGG | 0.645387 | 5_3:+6754655 | Msa0794840:CDS |
| CCACTTGATTAAAATGCCCG+AGG | 0.646430 | 5_3:-6756334 | None:intergenic |
| ATCACGTGCAGCCTAATATG+GGG | 0.650041 | 5_3:+6759402 | Msa0794840:CDS |
| GGTAGTGGGAGTGACGGCGA+CGG | 0.652117 | 5_3:+6754483 | Msa0794840:CDS |
| TTTCTATTGAAGGAACACCC+TGG | 0.658670 | 5_3:-6758828 | None:intergenic |
| TATTATGCGCTGCATCTTGG+GGG | 0.666308 | 5_3:+6755969 | Msa0794840:CDS |
| TTCATTTCGTAAATTCACAG+AGG | 0.686497 | 5_3:+6758519 | Msa0794840:CDS |
| GCAAGTGGTTGATGCTATGG+CGG | 0.693157 | 5_3:+6754639 | Msa0794840:CDS |
| TGTGCCAGTCATTAGATGTG+GGG | 0.693796 | 5_3:-6756075 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATTTCTCAAATTATTAT+TGG | + | chr5_3:6757378-6757397 | Msa0794840:intron | 10.0% |
| !!! | CAAATTAAATTTTATTTTTC+TGG | - | chr5_3:6757471-6757490 | None:intergenic | 10.0% |
| !! | CAGAAAAATAAAATTTAATT+TGG | + | chr5_3:6757469-6757488 | Msa0794840:intron | 10.0% |
| !! | AAAAAACTAAAAAAATCTAA+GGG | - | chr5_3:6757918-6757937 | None:intergenic | 10.0% |
| !! | AAGAAAAATTCAAAATATAA+AGG | - | chr5_3:6758891-6758910 | None:intergenic | 10.0% |
| !!! | GTTTTTTGATTTATTATGTT+TGG | + | chr5_3:6754864-6754883 | Msa0794840:intron | 15.0% |
| !!! | TCTTAATTGATCTTTAAAAT+TGG | + | chr5_3:6756400-6756419 | Msa0794840:intron | 15.0% |
| !!! | AAAAGTTTTTGTATAAAAGA+AGG | - | chr5_3:6756866-6756885 | None:intergenic | 15.0% |
| !! | TTAATTCTATAATAGTGAAA+TGG | + | chr5_3:6756884-6756903 | Msa0794840:intron | 15.0% |
| !! | TAAATGATAATAGTTGTAAA+TGG | + | chr5_3:6756911-6756930 | Msa0794840:intron | 15.0% |
| !! | NNNNNNTATGATTTATTTGG+TGG | + | chr5_3:6757051-6757070 | Msa0794840:intron | 15.0% |
| !! | CAAAAAACTAAAAAAATCTA+AGG | - | chr5_3:6757919-6757938 | None:intergenic | 15.0% |
| !!! | TTTTGTTTATAATAGAAAAC+CGG | + | chr5_3:6758186-6758205 | Msa0794840:intron | 15.0% |
| !! | TGCAATTACAAAAATATATA+TGG | + | chr5_3:6758280-6758299 | Msa0794840:intron | 15.0% |
| !! | AGAAAAAGAAACTAATATTT+GGG | - | chr5_3:6759637-6759656 | None:intergenic | 15.0% |
| !! | AAGAAAAAGAAACTAATATT+TGG | - | chr5_3:6759638-6759657 | None:intergenic | 15.0% |
| !!! | TGTTCTTTTATCATATTAAT+AGG | + | chr5_3:6760122-6760141 | Msa0794840:intron | 15.0% |
| !!! | ATTTTCATTTTATATGCTTA+GGG | - | chr5_3:6760955-6760974 | None:intergenic | 15.0% |
| !!! | AATTTTCATTTTATATGCTT+AGG | - | chr5_3:6760956-6760975 | None:intergenic | 15.0% |
| !! | TAATGTTCCTATATAATATT+TGG | - | chr5_3:6761009-6761028 | None:intergenic | 15.0% |
| !!! | TTTTAATTTTTCTTATATCG+TGG | - | chr5_3:6761896-6761915 | None:intergenic | 15.0% |
| !! | ACGATATAAGAAAAATTAAA+AGG | + | chr5_3:6761895-6761914 | Msa0794840:intron | 15.0% |
| !!! | GATTTGATTTTTGAATAATG+TGG | + | chr5_3:6755049-6755068 | Msa0794840:intron | 20.0% |
| !!! | GTCATTTTCTCAAATTTTAT+CGG | + | chr5_3:6755448-6755467 | Msa0794840:intron | 20.0% |
| !! | AAACAAACCAATTTAACAAA+AGG | - | chr5_3:6755919-6755938 | None:intergenic | 20.0% |
| !! | TTTAACGTTATTACATGAAA+AGG | - | chr5_3:6756168-6756187 | None:intergenic | 20.0% |
| !! | GAAAAACAAATCATACAATT+AGG | - | chr5_3:6756643-6756662 | None:intergenic | 20.0% |
| !!! | ATGTTTTTGATCTAAATGTA+AGG | + | chr5_3:6756798-6756817 | Msa0794840:intron | 20.0% |
| !! | AAAGAAACAATAATAGTAGT+TGG | + | chr5_3:6757112-6757131 | Msa0794840:intron | 20.0% |
| !! | AAGAAACAATAATAGTAGTT+GGG | + | chr5_3:6757113-6757132 | Msa0794840:intron | 20.0% |
| !!! | GATTTTTTTAGTTTTTTGCT+TGG | + | chr5_3:6757921-6757940 | Msa0794840:intron | 20.0% |
| !! | AATTACTCAATGAACATAAA+AGG | + | chr5_3:6758157-6758176 | Msa0794840:intron | 20.0% |
| !! | GTGTATTAAATATAGAAAAC+CGG | + | chr5_3:6758212-6758231 | Msa0794840:intron | 20.0% |
| !! | TAAAGATTTCTTTCTTTACA+TGG | + | chr5_3:6758732-6758751 | Msa0794840:CDS | 20.0% |
| !!! | AAAGTTATCTTTTCTATTGA+AGG | - | chr5_3:6758841-6758860 | None:intergenic | 20.0% |
| !! | AGAATAATCAGTTTATGATT+TGG | - | chr5_3:6758937-6758956 | None:intergenic | 20.0% |
| !! | TCTTCCATTCTAAATATAAT+AGG | - | chr5_3:6758962-6758981 | None:intergenic | 20.0% |
| !!! | ATTATATTTAGAATGGAAGA+TGG | + | chr5_3:6758962-6758981 | Msa0794840:intron | 20.0% |
| !! | TATACACATTCTTCAAATTA+GGG | + | chr5_3:6759096-6759115 | Msa0794840:CDS | 20.0% |
| !!! | TGTAGATTTTTTAGTCAAAA+AGG | - | chr5_3:6759277-6759296 | None:intergenic | 20.0% |
| !! | AAAATCTACAATGTCATTAA+AGG | + | chr5_3:6759287-6759306 | Msa0794840:intron | 20.0% |
| !! | TGAATTTATAAAACTAACCA+AGG | - | chr5_3:6759507-6759526 | None:intergenic | 20.0% |
| !!! | TTCTTTTTCCATGTTTTATT+TGG | + | chr5_3:6759544-6759563 | Msa0794840:intron | 20.0% |
| !!! | TTTTGCAATACTATAAAAGA+AGG | + | chr5_3:6759868-6759887 | Msa0794840:intron | 20.0% |
| !!! | GTTAATTGTTATTCCTAAAT+TGG | - | chr5_3:6759927-6759946 | None:intergenic | 20.0% |
| !! | AATAAGGGAAATTATAGAAA+AGG | - | chr5_3:6760068-6760087 | None:intergenic | 20.0% |
| !!! | TTTTATACAGAATGCAATAT+TGG | + | chr5_3:6760223-6760242 | Msa0794840:intron | 20.0% |
| !! | ATGTAAGAAAAGTTAAAACT+TGG | - | chr5_3:6761159-6761178 | None:intergenic | 20.0% |
| !!! | TGAAATTGTATCTTTTTATC+AGG | + | chr5_3:6761553-6761572 | Msa0794840:CDS | 20.0% |
| !!! | TATGTTGATAATCTTCCTAA+CGG | + | chr5_3:6754721-6754740 | Msa0794840:CDS | 25.0% |
| ! | ACAAAAACATAGACAAAACT+GGG | - | chr5_3:6754923-6754942 | None:intergenic | 25.0% |
| ! | AACAAAAACATAGACAAAAC+TGG | - | chr5_3:6754924-6754943 | None:intergenic | 25.0% |
| ! | TGTTTATGGAAAATGTACTT+TGG | + | chr5_3:6755103-6755122 | Msa0794840:intron | 25.0% |
| ! | GGATTTGGACATTTAATAAA+TGG | + | chr5_3:6755124-6755143 | Msa0794840:intron | 25.0% |
| ! | TTCAATGTAATCATATGTGT+CGG | - | chr5_3:6755424-6755443 | None:intergenic | 25.0% |
| !! | TTTCTCAAATTTTATCGGTA+TGG | + | chr5_3:6755453-6755472 | Msa0794840:intron | 25.0% |
| !! | TTCTCAAATTTTATCGGTAT+GGG | + | chr5_3:6755454-6755473 | Msa0794840:intron | 25.0% |
| !!! | TTTTTTATCAGTACTGAGAA+AGG | + | chr5_3:6755942-6755961 | Msa0794840:intron | 25.0% |
| !! | CAAAGAAAACCAAAGTTTTA+GGG | - | chr5_3:6756122-6756141 | None:intergenic | 25.0% |
| ! | AAACAGACATTTGTTTCATA+GGG | - | chr5_3:6756314-6756333 | None:intergenic | 25.0% |
| !!! | ATTTTAATCAAGTGGACAAA+AGG | + | chr5_3:6756342-6756361 | Msa0794840:CDS | 25.0% |
| !! | TTTTAATCAAGTGGACAAAA+GGG | + | chr5_3:6756343-6756362 | Msa0794840:CDS | 25.0% |
| ! | TATGTATTATACCTTAATCC+CGG | - | chr5_3:6756720-6756739 | None:intergenic | 25.0% |
| ! | AGAAAAAAACAATCTGTTGA+AGG | - | chr5_3:6756767-6756786 | None:intergenic | 25.0% |
| !!! | TCAACAGATTGTTTTTTTCT+AGG | + | chr5_3:6756767-6756786 | Msa0794840:intron | 25.0% |
| !!! | CAACAGATTGTTTTTTTCTA+GGG | + | chr5_3:6756768-6756787 | Msa0794840:intron | 25.0% |
| !!! | CTTTTTTATGCCTTTATATC+TGG | - | chr5_3:6757088-6757107 | None:intergenic | 25.0% |
| !! | CAGATATAAAGGCATAAAAA+AGG | + | chr5_3:6757086-6757105 | Msa0794840:intron | 25.0% |
| ! | AGAAACAATAATAGTAGTTG+GGG | + | chr5_3:6757114-6757133 | Msa0794840:intron | 25.0% |
| !!! | TACATGTTTTGTTTTGTTTG+TGG | + | chr5_3:6757186-6757205 | Msa0794840:intron | 25.0% |
| ! | TTAATAGAAAGAATGGAGTT+TGG | - | chr5_3:6757250-6757269 | None:intergenic | 25.0% |
| ! | GGAGAAATTAATAGAAAGAA+TGG | - | chr5_3:6757257-6757276 | None:intergenic | 25.0% |
| !!! | TTTGGTTTTTGTTCATTTTC+AGG | + | chr5_3:6757487-6757506 | Msa0794840:intron | 25.0% |
| !!! | TTGGTTTTTGTTCATTTTCA+GGG | + | chr5_3:6757488-6757507 | Msa0794840:intron | 25.0% |
| !! | TTTTTCCAATAGCTAAGATA+TGG | + | chr5_3:6757667-6757686 | Msa0794840:intron | 25.0% |
| ! | CTAAGATATGGAATAGTTAA+TGG | + | chr5_3:6757679-6757698 | Msa0794840:intron | 25.0% |
| ! | AAGATATACTGGAGAATTTA+TGG | + | chr5_3:6757844-6757863 | Msa0794840:intron | 25.0% |
| !!! | TTTTTTAGTTTTTTGCTTGG+TGG | + | chr5_3:6757924-6757943 | Msa0794840:intron | 25.0% |
| ! | ACATTAGAGGTAGAAAAATA+AGG | + | chr5_3:6757986-6758005 | Msa0794840:intron | 25.0% |
| ! | CATTAGAGGTAGAAAAATAA+GGG | + | chr5_3:6757987-6758006 | Msa0794840:intron | 25.0% |
| ! | TGCTTATAATATTGATCAGA+AGG | - | chr5_3:6758071-6758090 | None:intergenic | 25.0% |
| ! | ATTCAATGAACCTAAAAAGT+GGG | - | chr5_3:6758098-6758117 | None:intergenic | 25.0% |
| ! | TATTCAATGAACCTAAAAAG+TGG | - | chr5_3:6758099-6758118 | None:intergenic | 25.0% |
| ! | CATTGAATAACTTATGTATC+TGG | + | chr5_3:6758110-6758129 | Msa0794840:intron | 25.0% |
| ! | TATTAAATATAGAAAACCGG+AGG | + | chr5_3:6758215-6758234 | Msa0794840:intron | 25.0% |
| ! | ATTAAATATAGAAAACCGGA+GGG | + | chr5_3:6758216-6758235 | Msa0794840:intron | 25.0% |
| ! | GCAAAAATTATATTCGATTC+AGG | - | chr5_3:6758403-6758422 | None:intergenic | 25.0% |
| !! | GAATCGAATATAATTTTTGC+AGG | + | chr5_3:6758403-6758422 | Msa0794840:intron | 25.0% |
| ! | TATAAACAATCAACTCTTGA+TGG | - | chr5_3:6758576-6758595 | None:intergenic | 25.0% |
| !! | ATCAAGAGTTGATTGTTTAT+AGG | + | chr5_3:6758575-6758594 | Msa0794840:CDS | 25.0% |
| ! | CTCACCTATTATATTTAGAA+TGG | + | chr5_3:6758955-6758974 | Msa0794840:intron | 25.0% |
| ! | CTATACACATTCTTCAAATT+AGG | + | chr5_3:6759095-6759114 | Msa0794840:CDS | 25.0% |
| ! | AAAAAAGAATTCCCCATATT+AGG | - | chr5_3:6759416-6759435 | None:intergenic | 25.0% |
| !! | AGTTTATCTTTGAAGGATAT+AGG | + | chr5_3:6759598-6759617 | Msa0794840:intron | 25.0% |
| !! | TTTTCTTTTTATCTCTGACA+TGG | + | chr5_3:6759656-6759675 | Msa0794840:intron | 25.0% |
| !!! | AGACATTCTAAAATCTGAAA+CGG | + | chr5_3:6760179-6760198 | Msa0794840:intron | 25.0% |
| ! | TATAAAATGAGATGCTTCTA+CGG | - | chr5_3:6760210-6760229 | None:intergenic | 25.0% |
| !!! | TAAACTATTTTTCACTAGGT+GGG | - | chr5_3:6760351-6760370 | None:intergenic | 25.0% |
| ! | AAAAATGCAAAGCAGTAATT+AGG | - | chr5_3:6760440-6760459 | None:intergenic | 25.0% |
| ! | AGAAACACAAAAACTAAAGA+AGG | - | chr5_3:6760465-6760484 | None:intergenic | 25.0% |
| !!! | TTGTAGTTGTGTTTGATTTT+TGG | + | chr5_3:6760488-6760507 | Msa0794840:intron | 25.0% |
| ! | ATTACGTTGATCTGATTATT+TGG | + | chr5_3:6760653-6760672 | Msa0794840:CDS | 25.0% |
| ! | AAATCAAATCAATAGTGAGA+TGG | - | chr5_3:6760748-6760767 | None:intergenic | 25.0% |
| !! | TTTTGTTGCTGTATATAACA+TGG | + | chr5_3:6761523-6761542 | Msa0794840:CDS | 25.0% |
| !! | ATTTTTCTTATATCGTGGAA+AGG | - | chr5_3:6761891-6761910 | None:intergenic | 25.0% |
| ! | AAATTAAAAGGCTATGTACA+TGG | + | chr5_3:6761907-6761926 | Msa0794840:intron | 25.0% |
| AGAGAGAGAAAAAGAAAGAA+GGG | - | chr5_3:6754216-6754235 | None:intergenic | 30.0% | |
| TGATTCGATTTAACAAACTC+CGG | - | chr5_3:6754305-6754324 | None:intergenic | 30.0% | |
| GTTAGGAAGATTATCAACAT+AGG | - | chr5_3:6754722-6754741 | None:intergenic | 30.0% | |
| !! | ATGTTGATAATCTTCCTAAC+GGG | + | chr5_3:6754722-6754741 | Msa0794840:CDS | 30.0% |
| AAAAAAAGTGATTACCCGTT+AGG | - | chr5_3:6754739-6754758 | None:intergenic | 30.0% | |
| TGGAAAATGTACTTTGGATT+TGG | + | chr5_3:6755109-6755128 | Msa0794840:intron | 30.0% | |
| ! | TAATTTGCAAGCTGTAAGAA+TGG | + | chr5_3:6755202-6755221 | Msa0794840:intron | 30.0% |
| !! | AATGGTTGATAGATTGTGTT+TGG | + | chr5_3:6755220-6755239 | Msa0794840:intron | 30.0% |
| TTGATAGATTGTGTTTGGAT+TGG | + | chr5_3:6755225-6755244 | Msa0794840:intron | 30.0% | |
| !!! | ATTGTGTTTGGATTGGTTTT+GGG | + | chr5_3:6755232-6755251 | Msa0794840:intron | 30.0% |
| TGATTGATAGATTGTGTGTT+TGG | + | chr5_3:6755570-6755589 | Msa0794840:intron | 30.0% | |
| AGTCTATGACAGCTATTTAT+TGG | + | chr5_3:6755635-6755654 | Msa0794840:intron | 30.0% | |
| GTCTATGACAGCTATTTATT+GGG | + | chr5_3:6755636-6755655 | Msa0794840:intron | 30.0% | |
| TCCTTATCTTTAGCAAGATT+TGG | + | chr5_3:6755829-6755848 | Msa0794840:intron | 30.0% | |
| ACCAAATCTTGCTAAAGATA+AGG | - | chr5_3:6755833-6755852 | None:intergenic | 30.0% | |
| ACCAATTTAACAAAAGGACT+CGG | - | chr5_3:6755913-6755932 | None:intergenic | 30.0% | |
| TGATCAAAACCCTAAAACTT+TGG | + | chr5_3:6756110-6756129 | Msa0794840:intron | 30.0% | |
| ! | GCAAAGAAAACCAAAGTTTT+AGG | - | chr5_3:6756123-6756142 | None:intergenic | 30.0% |
| ! | AAATTGAATTTTATGCTCGC+AGG | + | chr5_3:6756185-6756204 | Msa0794840:intron | 30.0% |
| GAATTCATTGCTAAAGAAGA+TGG | + | chr5_3:6756240-6756259 | Msa0794840:CDS | 30.0% | |
| GAAACAGACATTTGTTTCAT+AGG | - | chr5_3:6756315-6756334 | None:intergenic | 30.0% | |
| ! | GCTTGTTTGGTAACTATTTA+TGG | - | chr5_3:6756444-6756463 | None:intergenic | 30.0% |
| CAAATCATACAATTAGGCTA+AGG | - | chr5_3:6756637-6756656 | None:intergenic | 30.0% | |
| AAAAAACAATCTGTTGAAGG+CGG | - | chr5_3:6756764-6756783 | None:intergenic | 30.0% | |
| TATGCCTTTATATCTGGATA+AGG | - | chr5_3:6757082-6757101 | None:intergenic | 30.0% | |
| GAAACAATAATAGTAGTTGG+GGG | + | chr5_3:6757115-6757134 | Msa0794840:intron | 30.0% | |
| AAACAATAATAGTAGTTGGG+GGG | + | chr5_3:6757116-6757135 | Msa0794840:intron | 30.0% | |
| AGTGAAAACTTGAAAAGAAG+TGG | + | chr5_3:6757211-6757230 | Msa0794840:intron | 30.0% | |
| GAAAGGAAAGAATTGAGATT+TGG | - | chr5_3:6757278-6757297 | None:intergenic | 30.0% | |
| AATCTCAATTCTTTCCTTTC+CGG | + | chr5_3:6757278-6757297 | Msa0794840:intron | 30.0% | |
| AACGTAAAAGACTGAGAAAT+TGG | - | chr5_3:6757360-6757379 | None:intergenic | 30.0% | |
| TTTCTCTGAGTTTGAATAGA+AGG | + | chr5_3:6757517-6757536 | Msa0794840:intron | 30.0% | |
| CTATTCCATATCTTAGCTAT+TGG | - | chr5_3:6757675-6757694 | None:intergenic | 30.0% | |
| ACTTCAGATCAACAATTAGA+TGG | + | chr5_3:6757753-6757772 | Msa0794840:intron | 30.0% | |
| GTTCTTCTTGTAAGATATAC+TGG | + | chr5_3:6757833-6757852 | Msa0794840:intron | 30.0% | |
| TATCCAATAGAGAACATTAG+AGG | + | chr5_3:6757973-6757992 | Msa0794840:intron | 30.0% | |
| !! | TATGTTTTAGATATGCAGAC+AGG | + | chr5_3:6758039-6758058 | Msa0794840:intron | 30.0% |
| TGTTTATAATAGAAAACCGG+AGG | + | chr5_3:6758189-6758208 | Msa0794840:intron | 30.0% | |
| GTTTATAATAGAAAACCGGA+GGG | + | chr5_3:6758190-6758209 | Msa0794840:intron | 30.0% | |
| TCTATATTTAATACACCCTC+CGG | - | chr5_3:6758208-6758227 | None:intergenic | 30.0% | |
| ATATATATGGTGTGCTAGTT+TGG | + | chr5_3:6758293-6758312 | Msa0794840:intron | 30.0% | |
| TTGTATTGTTCCTTTGTTGA+AGG | + | chr5_3:6758375-6758394 | Msa0794840:intron | 30.0% | |
| ACCTCATATATTGTGTAACT+TGG | - | chr5_3:6758484-6758503 | None:intergenic | 30.0% | |
| ATTTACGAAATGAATGGTCT+GGG | - | chr5_3:6758513-6758532 | None:intergenic | 30.0% | |
| AATTTACGAAATGAATGGTC+TGG | - | chr5_3:6758514-6758533 | None:intergenic | 30.0% | |
| CTGTGAATTTACGAAATGAA+TGG | - | chr5_3:6758519-6758538 | None:intergenic | 30.0% | |
| TTCATTTCGTAAATTCACAG+AGG | + | chr5_3:6758519-6758538 | Msa0794840:CDS | 30.0% | |
| AGATTTCTTTCTTTACATGG+AGG | + | chr5_3:6758735-6758754 | Msa0794840:CDS | 30.0% | |
| GATTTCTTTCTTTACATGGA+GGG | + | chr5_3:6758736-6758755 | Msa0794840:CDS | 30.0% | |
| ! | AGATAACTTTTCACCTTTTG+AGG | + | chr5_3:6758851-6758870 | Msa0794840:CDS | 30.0% |
| ! | TTTGAGATCTTCAAAATCGA+AGG | + | chr5_3:6758911-6758930 | Msa0794840:intron | 30.0% |
| ! | TGTTAACTTGACCCATAATA+TGG | + | chr5_3:6759021-6759040 | Msa0794840:CDS | 30.0% |
| ! | GTTAACTTGACCCATAATAT+GGG | + | chr5_3:6759022-6759041 | Msa0794840:CDS | 30.0% |
| CTTCTTGTATGATGATCTAT+TGG | + | chr5_3:6759048-6759067 | Msa0794840:CDS | 30.0% | |
| TATTGGCAATTGTATCACTT+CGG | + | chr5_3:6759065-6759084 | Msa0794840:CDS | 30.0% | |
| ATTCTTCAAATTAGGGATTC+TGG | + | chr5_3:6759103-6759122 | Msa0794840:CDS | 30.0% | |
| ! | TGATTTTCTACATTGTTCTC+TGG | - | chr5_3:6759386-6759405 | None:intergenic | 30.0% |
| !!! | ATGGGGAATTCTTTTTTAAG+TGG | + | chr5_3:6759419-6759438 | Msa0794840:CDS | 30.0% |
| ATTGCTTTCATTCATATTCC+AGG | + | chr5_3:6759454-6759473 | Msa0794840:CDS | 30.0% | |
| TTGCTTTCATTCATATTCCA+GGG | + | chr5_3:6759455-6759474 | Msa0794840:CDS | 30.0% | |
| AAACAGAGCCAAATAAAACA+TGG | - | chr5_3:6759555-6759574 | None:intergenic | 30.0% | |
| TCTTTGCTTTAACATGTTTC+AGG | + | chr5_3:6759574-6759593 | Msa0794840:intron | 30.0% | |
| TTCAGGAAGTTTATCTTTGA+AGG | + | chr5_3:6759591-6759610 | Msa0794840:intron | 30.0% | |
| ! | TTTTATACTGTCACTGCTTA+TGG | + | chr5_3:6759740-6759759 | Msa0794840:intron | 30.0% |
| ! | AAGCATACATTTTGAATGCA+TGG | + | chr5_3:6759807-6759826 | Msa0794840:intron | 30.0% |
| ! | AGCATACATTTTGAATGCAT+GGG | + | chr5_3:6759808-6759827 | Msa0794840:intron | 30.0% |
| AAGCAGTTAATCATGTTCAA+AGG | + | chr5_3:6759951-6759970 | Msa0794840:intron | 30.0% | |
| AGCAGTTAATCATGTTCAAA+GGG | + | chr5_3:6759952-6759971 | Msa0794840:intron | 30.0% | |
| GCACATTGTTTATTCAGTTA+AGG | - | chr5_3:6760002-6760021 | None:intergenic | 30.0% | |
| CAATAATGATAGACTATGTG+GGG | - | chr5_3:6760096-6760115 | None:intergenic | 30.0% | |
| CCAATAATGATAGACTATGT+GGG | - | chr5_3:6760097-6760116 | None:intergenic | 30.0% | |
| CCACATAGTCTATCATTATT+GGG | + | chr5_3:6760095-6760114 | Msa0794840:intron | 30.0% | |
| CCATACACTTATTCATGTTT+AGG | - | chr5_3:6760153-6760172 | None:intergenic | 30.0% | |
| CCTAAACATGAATAAGTGTA+TGG | + | chr5_3:6760150-6760169 | Msa0794840:intron | 30.0% | |
| ATAAAATGAGATGCTTCTAC+GGG | - | chr5_3:6760209-6760228 | None:intergenic | 30.0% | |
| !!! | CAGAATGCAATATTGGTTTT+TGG | + | chr5_3:6760230-6760249 | Msa0794840:intron | 30.0% |
| AAGTGTATTAGCCAATATAG+AGG | + | chr5_3:6760257-6760276 | Msa0794840:intron | 30.0% | |
| GAAGTCTATATGACAGTATT+AGG | - | chr5_3:6760301-6760320 | None:intergenic | 30.0% | |
| !! | AAACTATTTTTCACTAGGTG+GGG | - | chr5_3:6760350-6760369 | None:intergenic | 30.0% |
| !! | CTAAACTATTTTTCACTAGG+TGG | - | chr5_3:6760352-6760371 | None:intergenic | 30.0% |
| !! | CCACTAAACTATTTTTCACT+AGG | - | chr5_3:6760355-6760374 | None:intergenic | 30.0% |
| CCTAGTGAAAAATAGTTTAG+TGG | + | chr5_3:6760352-6760371 | Msa0794840:intron | 30.0% | |
| ! | TGAGTGTTATTATTACACCT+TGG | + | chr5_3:6760382-6760401 | Msa0794840:intron | 30.0% |
| AAAGCAGTAATTAGGAGAAA+CGG | - | chr5_3:6760432-6760451 | None:intergenic | 30.0% | |
| ! | CTTTTCAGTGTGTAAATTCA+TGG | + | chr5_3:6760557-6760576 | Msa0794840:intron | 30.0% |
| ! | GACATTTTATGCATCTTAAC+TGG | + | chr5_3:6760691-6760710 | Msa0794840:intron | 30.0% |
| TCCAAGGCCAAATATTATAT+AGG | + | chr5_3:6760999-6761018 | Msa0794840:intron | 30.0% | |
| TCCTATATAATATTTGGCCT+TGG | - | chr5_3:6761003-6761022 | None:intergenic | 30.0% | |
| ! | CTTATAACTGAAGTATCTAG+TGG | + | chr5_3:6761046-6761065 | Msa0794840:intron | 30.0% |
| ! | TCAATTGTTTTCGGTAAGTT+AGG | - | chr5_3:6761134-6761153 | None:intergenic | 30.0% |
| ! | AACTTGGCATCAATTGTTTT+CGG | - | chr5_3:6761143-6761162 | None:intergenic | 30.0% |
| GAGATTTAATTATCCGAATG+TGG | + | chr5_3:6761237-6761256 | Msa0794840:intron | 30.0% | |
| AAGATATCTCATACCATGTT+AGG | + | chr5_3:6761291-6761310 | Msa0794840:intron | 30.0% | |
| AGATATCTCATACCATGTTA+GGG | + | chr5_3:6761292-6761311 | Msa0794840:intron | 30.0% | |
| TTTAAGAGTTATCCCTAACA+TGG | - | chr5_3:6761307-6761326 | None:intergenic | 30.0% | |
| ATGTTAGGGATAACTCTTAA+AGG | + | chr5_3:6761306-6761325 | Msa0794840:intron | 30.0% | |
| ACTGGCTAAATCATATCATT+AGG | - | chr5_3:6761372-6761391 | None:intergenic | 30.0% | |
| AATCAATATGTGCTCTATTG+AGG | + | chr5_3:6761429-6761448 | Msa0794840:intron | 30.0% | |
| TTATATACAGCAACAAAAGC+TGG | - | chr5_3:6761521-6761540 | None:intergenic | 30.0% | |
| ! | ATCCTGTGTTTCATTTTCAT+GGG | + | chr5_3:6761590-6761609 | Msa0794840:intron | 30.0% |
| ! | TATATGTTGTTTGAGCAGTT+TGG | + | chr5_3:6761692-6761711 | Msa0794840:CDS | 30.0% |
| AGTAAACCTTATCATCAAAC+CGG | - | chr5_3:6762055-6762074 | None:intergenic | 30.0% | |
| GAGAGAGAAAAAGAAAGAAG+GGG | - | chr5_3:6754215-6754234 | None:intergenic | 35.0% | |
| CAGAGAGAGAAAAAGAAAGA+AGG | - | chr5_3:6754217-6754236 | None:intergenic | 35.0% | |
| TTTAACAAACTCCGGTGAAA+CGG | - | chr5_3:6754297-6754316 | None:intergenic | 35.0% | |
| TTGTTGCGTGCATGATAAAA+CGG | + | chr5_3:6754370-6754389 | Msa0794840:five_prime_UTR | 35.0% | |
| TTCTTTCGGTGAGAAATCTT+CGG | + | chr5_3:6754400-6754419 | Msa0794840:five_prime_UTR | 35.0% | |
| GTGTTGAAAGAGTTTGAAGA+AGG | + | chr5_3:6754589-6754608 | Msa0794840:CDS | 35.0% | |
| !! | ATACGAGTGTTGAAAGGTTA+AGG | + | chr5_3:6754617-6754636 | Msa0794840:CDS | 35.0% |
| !! | GTTCAACAGTGTCATTTCAA+CGG | + | chr5_3:6754886-6754905 | Msa0794840:intron | 35.0% |
| AAACATAGACAAAACTGGGA+AGG | - | chr5_3:6754919-6754938 | None:intergenic | 35.0% | |
| GTTGTCTATTTCATGCTTTC+TGG | + | chr5_3:6754988-6755007 | Msa0794840:intron | 35.0% | |
| GCAATGAAAAACACCTAACA+TGG | - | chr5_3:6755018-6755037 | None:intergenic | 35.0% | |
| !!! | GATTGTGTTTGGATTGGTTT+TGG | + | chr5_3:6755231-6755250 | Msa0794840:intron | 35.0% |
| ! | AGGTGATTCATGATTTGTGT+CGG | + | chr5_3:6755516-6755535 | Msa0794840:intron | 35.0% |
| GATAGATTGTGTGTTTGGAT+TGG | + | chr5_3:6755575-6755594 | Msa0794840:intron | 35.0% | |
| ATGACAGCTATTTATTGGGA+TGG | + | chr5_3:6755640-6755659 | Msa0794840:intron | 35.0% | |
| TGACAGCTATTTATTGGGAT+GGG | + | chr5_3:6755641-6755660 | Msa0794840:intron | 35.0% | |
| AGTAGCATATACAAATCCAC+CGG | - | chr5_3:6755783-6755802 | None:intergenic | 35.0% | |
| ! | ACCGAGTCCTTTTGTTAAAT+TGG | + | chr5_3:6755909-6755928 | Msa0794840:intron | 35.0% |
| ! | ATCTTGGGGGAACAAATTTT+AGG | + | chr5_3:6755982-6756001 | Msa0794840:CDS | 35.0% |
| ! | TCTTGGGGGAACAAATTTTA+GGG | + | chr5_3:6755983-6756002 | Msa0794840:CDS | 35.0% |
| !!! | GAACAAATTTTAGGGTAACG+CGG | + | chr5_3:6755991-6756010 | Msa0794840:CDS | 35.0% |
| !!! | AACAAATTTTAGGGTAACGC+GGG | + | chr5_3:6755992-6756011 | Msa0794840:CDS | 35.0% |
| AGACATTTGTTTCATAGGGA+AGG | - | chr5_3:6756310-6756329 | None:intergenic | 35.0% | |
| GAAACAAATGTCTGTTTCCT+CGG | + | chr5_3:6756317-6756336 | Msa0794840:CDS | 35.0% | |
| AAACAAATGTCTGTTTCCTC+GGG | + | chr5_3:6756318-6756337 | Msa0794840:CDS | 35.0% | |
| ! | AGGGTTTTCCATTGTAGATA+TGG | + | chr5_3:6756362-6756381 | Msa0794840:CDS | 35.0% |
| GTGACTAACCATATCTACAA+TGG | - | chr5_3:6756373-6756392 | None:intergenic | 35.0% | |
| ATAGGACATACATGCTTGTT+TGG | - | chr5_3:6756457-6756476 | None:intergenic | 35.0% | |
| AAACCAAGTGCAACTTGAAT+AGG | - | chr5_3:6756475-6756494 | None:intergenic | 35.0% | |
| ACCTGACAACAAATAGCTTT+GGG | - | chr5_3:6756526-6756545 | None:intergenic | 35.0% | |
| AACCTGACAACAAATAGCTT+TGG | - | chr5_3:6756527-6756546 | None:intergenic | 35.0% | |
| !! | AAAGCTATTTGTTGTCAGGT+TGG | + | chr5_3:6756526-6756545 | Msa0794840:intron | 35.0% |
| CATACAATTAGGCTAAGGAA+AGG | - | chr5_3:6756632-6756651 | None:intergenic | 35.0% | |
| TTGCTTTCAGAGGGAAATAT+TGG | - | chr5_3:6756675-6756694 | None:intergenic | 35.0% | |
| TTGCCTTATACTTACACAAC+CGG | + | chr5_3:6756698-6756717 | Msa0794840:intron | 35.0% | |
| CTCACCTTATCCAGATATAA+AGG | + | chr5_3:6757075-6757094 | Msa0794840:intron | 35.0% | |
| TAGCAACTACAGTAGTAAGT+TGG | + | chr5_3:6757146-6757165 | Msa0794840:intron | 35.0% | |
| !! | AACTACAGTAGTAAGTTGGT+GGG | + | chr5_3:6757150-6757169 | Msa0794840:intron | 35.0% |
| ATTGGTTGCAGAGATATTAC+CGG | - | chr5_3:6757342-6757361 | None:intergenic | 35.0% | |
| !! | CATGTCATAAGCTGTTTTGT+AGG | + | chr5_3:6757892-6757911 | Msa0794840:intron | 35.0% |
| !!! | AGTTTTTTGCTTGGTGGTAT+CGG | + | chr5_3:6757930-6757949 | Msa0794840:intron | 35.0% |
| CTACCTCTAATGTTCTCTAT+TGG | - | chr5_3:6757979-6757998 | None:intergenic | 35.0% | |
| GGTAGAAAAATAAGGGTAAG+TGG | + | chr5_3:6757994-6758013 | Msa0794840:intron | 35.0% | |
| !!! | TAAGCAAACACCCACTTTTT+AGG | + | chr5_3:6758085-6758104 | Msa0794840:intron | 35.0% |
| ACACTATTTAATACACCCTC+CGG | - | chr5_3:6758234-6758253 | None:intergenic | 35.0% | |
| AGGGTGTATTAAATAGTGTC+AGG | + | chr5_3:6758235-6758254 | Msa0794840:intron | 35.0% | |
| ! | TTGGAAAATTTGCTTGCACA+TGG | + | chr5_3:6758312-6758331 | Msa0794840:intron | 35.0% |
| AGGTGTAATTTAATGCTTGC+AGG | + | chr5_3:6758423-6758442 | Msa0794840:intron | 35.0% | |
| TCGGCGATTCTATGAAAATT+TGG | + | chr5_3:6758456-6758475 | Msa0794840:CDS | 35.0% | |
| GCCAAGTTACACAATATATG+AGG | + | chr5_3:6758480-6758499 | Msa0794840:CDS | 35.0% | |
| TTTCGTAAATTCACAGAGGA+TGG | + | chr5_3:6758523-6758542 | Msa0794840:CDS | 35.0% | |
| GGTTTCTGCTGAAACTTATA+AGG | - | chr5_3:6758555-6758574 | None:intergenic | 35.0% | |
| TGATTGTTTATAGGCCTAGA+TGG | + | chr5_3:6758584-6758603 | Msa0794840:CDS | 35.0% | |
| CATGAAAAAGAAAGCCATCT+AGG | - | chr5_3:6758601-6758620 | None:intergenic | 35.0% | |
| !! | TCGAATCTTCTTGCTTTTGA+CGG | - | chr5_3:6758655-6758674 | None:intergenic | 35.0% |
| TACATGGAGGGTAATCAATT+TGG | + | chr5_3:6758748-6758767 | Msa0794840:CDS | 35.0% | |
| TACTGAAGACTTTCTTATCC+AGG | - | chr5_3:6758994-6759013 | None:intergenic | 35.0% | |
| CAAGAAGACACCCATATTAT+GGG | - | chr5_3:6759035-6759054 | None:intergenic | 35.0% | |
| ACAAGAAGACACCCATATTA+TGG | - | chr5_3:6759036-6759055 | None:intergenic | 35.0% | |
| CTTGTTGAGTATTCCATTAG+AGG | + | chr5_3:6759241-6759260 | Msa0794840:intron | 35.0% | |
| TATTCCATTAGAGGAGTTGT+TGG | + | chr5_3:6759250-6759269 | Msa0794840:intron | 35.0% | |
| ATTCCATTAGAGGAGTTGTT+GGG | + | chr5_3:6759251-6759270 | Msa0794840:intron | 35.0% | |
| ! | AAAGACAATCATTTGCTGAC+AGG | + | chr5_3:6759322-6759341 | Msa0794840:intron | 35.0% |
| ! | AAGACAATCATTTGCTGACA+GGG | + | chr5_3:6759323-6759342 | Msa0794840:intron | 35.0% |
| TGACAAAAATAAACAGCAGC+AGG | + | chr5_3:6759358-6759377 | Msa0794840:CDS | 35.0% | |
| CATTCATATTCCAGGGAATA+TGG | + | chr5_3:6759462-6759481 | Msa0794840:CDS | 35.0% | |
| TTTCTTCATTCCATATTCCC+TGG | - | chr5_3:6759475-6759494 | None:intergenic | 35.0% | |
| TGAAGAAACAGATGATACCT+TGG | + | chr5_3:6759487-6759506 | Msa0794840:CDS | 35.0% | |
| !! | AATTTGCTGTGGAGAACAAT+AGG | - | chr5_3:6759701-6759720 | None:intergenic | 35.0% |
| !! | GATCTCAAAACAATTTGCTG+TGG | - | chr5_3:6759712-6759731 | None:intergenic | 35.0% |
| AGCAGTGACAGTATAAAACA+GGG | - | chr5_3:6759738-6759757 | None:intergenic | 35.0% | |
| AAGCAGTGACAGTATAAAAC+AGG | - | chr5_3:6759739-6759758 | None:intergenic | 35.0% | |
| TGCTTGTGGAGAAAGAAATA+TGG | - | chr5_3:6759792-6759811 | None:intergenic | 35.0% | |
| GCATTCAAAATGTATGCTTG+TGG | - | chr5_3:6759806-6759825 | None:intergenic | 35.0% | |
| ACTAGAGATGCTTCCAATTT+AGG | + | chr5_3:6759911-6759930 | Msa0794840:intron | 35.0% | |
| AGTTAATCATGTTCAAAGGG+TGG | + | chr5_3:6759955-6759974 | Msa0794840:intron | 35.0% | |
| CCCACATAGTCTATCATTAT+TGG | + | chr5_3:6760094-6760113 | Msa0794840:intron | 35.0% | |
| CCCAATAATGATAGACTATG+TGG | - | chr5_3:6760098-6760117 | None:intergenic | 35.0% | |
| CAGATCATTTGCCTCTATAT+TGG | - | chr5_3:6760271-6760290 | None:intergenic | 35.0% | |
| AAACAATTGACAACGTACCA+AGG | - | chr5_3:6760402-6760421 | None:intergenic | 35.0% | |
| ! | AAAACTTGTTCCGAAGTCTT+TGG | - | chr5_3:6760618-6760637 | None:intergenic | 35.0% |
| GATCAACGTAATCTTGAAAG+TGG | - | chr5_3:6760645-6760664 | None:intergenic | 35.0% | |
| CGTTGATCTGATTATTTGGA+AGG | + | chr5_3:6760657-6760676 | Msa0794840:CDS | 35.0% | |
| GATCTGATTATTTGGAAGGT+AGG | + | chr5_3:6760661-6760680 | Msa0794840:intron | 35.0% | |
| !! | GGTCTTGTTTGATGATAAAG+CGG | - | chr5_3:6760727-6760746 | None:intergenic | 35.0% |
| ACTTAATTAGCAAGTGGTGT+CGG | - | chr5_3:6760836-6760855 | None:intergenic | 35.0% | |
| ! | CACCACTTGCTAATTAAGTT+TGG | + | chr5_3:6760837-6760856 | Msa0794840:CDS | 35.0% |
| TGCCAAACTTAATTAGCAAG+TGG | - | chr5_3:6760842-6760861 | None:intergenic | 35.0% | |
| ATTATCCGAATGTGGTAACA+AGG | + | chr5_3:6761245-6761264 | Msa0794840:intron | 35.0% | |
| TTATCCGAATGTGGTAACAA+GGG | + | chr5_3:6761246-6761265 | Msa0794840:intron | 35.0% | |
| AAAGGCTTACAACTGTTAAG+TGG | + | chr5_3:6761324-6761343 | Msa0794840:intron | 35.0% | |
| TATGATTTAGCCAGTAACAG+TGG | + | chr5_3:6761377-6761396 | Msa0794840:intron | 35.0% | |
| ATGATTTAGCCAGTAACAGT+GGG | + | chr5_3:6761378-6761397 | Msa0794840:intron | 35.0% | |
| ! | GCTCAACATGTTAACTTGAA+TGG | + | chr5_3:6761406-6761425 | Msa0794840:intron | 35.0% |
| !!! | TATTCATGTTTTGAAGCCTC+AGG | + | chr5_3:6761472-6761491 | Msa0794840:CDS | 35.0% |
| ! | CATCCTGTGTTTCATTTTCA+TGG | + | chr5_3:6761589-6761608 | Msa0794840:intron | 35.0% |
| AACCCATGAAAATGAAACAC+AGG | - | chr5_3:6761595-6761614 | None:intergenic | 35.0% | |
| ATTCTGGCAGAATGTAAAGA+CGG | - | chr5_3:6761657-6761676 | None:intergenic | 35.0% | |
| TTCTTATATCGTGGAAAGGA+AGG | - | chr5_3:6761887-6761906 | None:intergenic | 35.0% | |
| ! | AAAAGAGACTGGTCAAAGTA+AGG | - | chr5_3:6762032-6762051 | None:intergenic | 35.0% |
| !! | TCTTTTCCGGTTTGATGATA+AGG | + | chr5_3:6762046-6762065 | Msa0794840:CDS | 35.0% |
| AGAGAAAAAGAAAGAAGGGG+CGG | - | chr5_3:6754212-6754231 | None:intergenic | 40.0% | |
| !! | TCGCCGGAGATTTAATTTTC+CGG | - | chr5_3:6754262-6754281 | None:intergenic | 40.0% |
| TTAACAAACTCCGGTGAAAC+GGG | - | chr5_3:6754296-6754315 | None:intergenic | 40.0% | |
| ! | AAAACGGCGACGTTTTCTTT+CGG | + | chr5_3:6754386-6754405 | Msa0794840:five_prime_UTR | 40.0% |
| ACGGATGTAGTTTGATCGAT+CGG | + | chr5_3:6754444-6754463 | Msa0794840:five_prime_UTR | 40.0% | |
| TTTGATCGATCGGTGAAGAT+GGG | + | chr5_3:6754454-6754473 | Msa0794840:exon | 40.0% | |
| GAGTGAAGAGTAGAAGAAAG+TGG | + | chr5_3:6754551-6754570 | Msa0794840:CDS | 40.0% | |
| !! | GTTGTGATACGAGTGTTGAA+AGG | + | chr5_3:6754611-6754630 | Msa0794840:CDS | 40.0% |
| TGTTGAAAGGTTAAGGCAAG+TGG | + | chr5_3:6754624-6754643 | Msa0794840:CDS | 40.0% | |
| TGAACTGACATAGTGACACA+TGG | - | chr5_3:6755263-6755282 | None:intergenic | 40.0% | |
| AGTCTATGCCAGCTATTTAC+TGG | + | chr5_3:6755287-6755306 | Msa0794840:intron | 40.0% | |
| TATGCCAGCTATTTACTGGT+TGG | + | chr5_3:6755291-6755310 | Msa0794840:intron | 40.0% | |
| AATGCCAACCAGTAAATAGC+TGG | - | chr5_3:6755298-6755317 | None:intergenic | 40.0% | |
| !! | TCACTTTTCGCAAAGCAAAC+CGG | - | chr5_3:6755360-6755379 | None:intergenic | 40.0% |
| CATGAATCACCTATGAAGCA+TGG | - | chr5_3:6755508-6755527 | None:intergenic | 40.0% | |
| !! | TTGTGTGTTTGGATTGGTGT+TGG | + | chr5_3:6755581-6755600 | Msa0794840:intron | 40.0% |
| !! | TGTGTGTTTGGATTGGTGTT+GGG | + | chr5_3:6755582-6755601 | Msa0794840:intron | 40.0% |
| ACTAGATCTGCCAATCAAGA+AGG | + | chr5_3:6755752-6755771 | Msa0794840:intron | 40.0% | |
| GTAGCATATACAAATCCACC+GGG | - | chr5_3:6755782-6755801 | None:intergenic | 40.0% | |
| CTTGCTAAAGATAAGGAGTG+CGG | - | chr5_3:6755826-6755845 | None:intergenic | 40.0% | |
| CATATTATGCGCTGCATCTT+GGG | + | chr5_3:6755967-6755986 | Msa0794840:CDS | 40.0% | |
| ATATTATGCGCTGCATCTTG+GGG | + | chr5_3:6755968-6755987 | Msa0794840:CDS | 40.0% | |
| TTGTGCCAGTCATTAGATGT+GGG | - | chr5_3:6756079-6756098 | None:intergenic | 40.0% | |
| AGATGGTTCCAATACTTCAC+AGG | + | chr5_3:6756257-6756276 | Msa0794840:CDS | 40.0% | |
| CAATACTTCACAGGACAGAA+GGG | + | chr5_3:6756266-6756285 | Msa0794840:CDS | 40.0% | |
| !! | TGTCCTATTCAAGTTGCACT+TGG | + | chr5_3:6756469-6756488 | Msa0794840:intron | 40.0% |
| !! | ACCCAAAGCTATTTGTTGTC+AGG | + | chr5_3:6756522-6756541 | Msa0794840:intron | 40.0% |
| AGGAAAGGAATTCCTTACCA+AGG | - | chr5_3:6756617-6756636 | None:intergenic | 40.0% | |
| TGCCTTATACTTACACAACC+GGG | + | chr5_3:6756699-6756718 | Msa0794840:intron | 40.0% | |
| ATCCCGGTTGTGTAAGTATA+AGG | - | chr5_3:6756704-6756723 | None:intergenic | 40.0% | |
| TACTTACACAACCGGGATTA+AGG | + | chr5_3:6756706-6756725 | Msa0794840:intron | 40.0% | |
| ! | CAACTACAGTAGTAAGTTGG+TGG | + | chr5_3:6757149-6757168 | Msa0794840:intron | 40.0% |
| AAAGCAGCAATATTGCAGCT+CGG | + | chr5_3:6757559-6757578 | Msa0794840:intron | 40.0% | |
| !!! | GTTTTTTGCTTGGTGGTATC+GGG | + | chr5_3:6757931-6757950 | Msa0794840:intron | 40.0% |
| ! | GATTCAGGTTCCTTCAACAA+AGG | - | chr5_3:6758388-6758407 | None:intergenic | 40.0% |
| AGTTCATTGCAAGAAGCAAG+TGG | - | chr5_3:6758706-6758725 | None:intergenic | 40.0% | |
| AGCAGGTGCATCATGAATTT+GGG | - | chr5_3:6758794-6758813 | None:intergenic | 40.0% | |
| TTTCTATTGAAGGAACACCC+TGG | - | chr5_3:6758831-6758850 | None:intergenic | 40.0% | |
| !! | AGATGAGAAAGCACCTCAAA+AGG | - | chr5_3:6758867-6758886 | None:intergenic | 40.0% |
| ! | TTGTTGACGTTCGTGCTATT+GGG | + | chr5_3:6759131-6759150 | Msa0794840:CDS | 40.0% |
| AAATCACGTGCAGCCTAATA+TGG | + | chr5_3:6759400-6759419 | Msa0794840:CDS | 40.0% | |
| AATCACGTGCAGCCTAATAT+GGG | + | chr5_3:6759401-6759420 | Msa0794840:CDS | 40.0% | |
| GCAGTGACAGTATAAAACAG+GGG | - | chr5_3:6759737-6759756 | None:intergenic | 40.0% | |
| CTTATGGACAGGACATTGTT+TGG | + | chr5_3:6759756-6759775 | Msa0794840:intron | 40.0% | |
| CTATGTGGGGAGGAAAATAA+GGG | - | chr5_3:6760083-6760102 | None:intergenic | 40.0% | |
| ACTATGTGGGGAGGAAAATA+AGG | - | chr5_3:6760084-6760103 | None:intergenic | 40.0% | |
| TAATGATAGACTATGTGGGG+AGG | - | chr5_3:6760093-6760112 | None:intergenic | 40.0% | |
| GTAATTAGGAGAAACGGCAA+GGG | - | chr5_3:6760426-6760445 | None:intergenic | 40.0% | |
| AGTAATTAGGAGAAACGGCA+AGG | - | chr5_3:6760427-6760446 | None:intergenic | 40.0% | |
| !!! | GTTTTTTCCCGATTTACCAG+AGG | + | chr5_3:6760590-6760609 | Msa0794840:intron | 40.0% |
| TTTGGATCCTCTGGTAAATC+GGG | - | chr5_3:6760600-6760619 | None:intergenic | 40.0% | |
| CTTTGGATCCTCTGGTAAAT+CGG | - | chr5_3:6760601-6760620 | None:intergenic | 40.0% | |
| AGGAATTGAACAGATGTTGC+TGG | - | chr5_3:6760793-6760812 | None:intergenic | 40.0% | |
| GCAACATCTGTTCAATTCCT+TGG | + | chr5_3:6760793-6760812 | Msa0794840:intron | 40.0% | |
| ATTAAGTTTGGCAGCGTAGA+TGG | + | chr5_3:6760849-6760868 | Msa0794840:CDS | 40.0% | |
| ! | GTAGGAGGCTCTTTTCTAAA+TGG | + | chr5_3:6761098-6761117 | Msa0794840:intron | 40.0% |
| ! | GTTTTCGGTAAGTTAGGACA+GGG | - | chr5_3:6761128-6761147 | None:intergenic | 40.0% |
| ! | TGTTTTCGGTAAGTTAGGAC+AGG | - | chr5_3:6761129-6761148 | None:intergenic | 40.0% |
| ! | TCATGAAACTGTGTTCTGAG+AGG | - | chr5_3:6761207-6761226 | None:intergenic | 40.0% |
| CAGAACACAGTTTCATGAAC+TGG | + | chr5_3:6761209-6761228 | Msa0794840:intron | 40.0% | |
| TCAACCCTTGTTACCACATT+CGG | - | chr5_3:6761253-6761272 | None:intergenic | 40.0% | |
| TGATTTAGCCAGTAACAGTG+GGG | + | chr5_3:6761379-6761398 | Msa0794840:intron | 40.0% | |
| TCAGCATTTCTTGATACCTG+AGG | - | chr5_3:6761491-6761510 | None:intergenic | 40.0% | |
| ATACAGCAACAAAAGCTGGA+TGG | - | chr5_3:6761517-6761536 | None:intergenic | 40.0% | |
| AGAATGTAAAGACGGATCAG+GGG | - | chr5_3:6761649-6761668 | None:intergenic | 40.0% | |
| CAGAATGTAAAGACGGATCA+GGG | - | chr5_3:6761650-6761669 | None:intergenic | 40.0% | |
| ACCACTTTCATGTAACGTCA+AGG | + | chr5_3:6761717-6761736 | Msa0794840:CDS | 40.0% | |
| TCCTTGACGTTACATGAAAG+TGG | - | chr5_3:6761721-6761740 | None:intergenic | 40.0% | |
| TTCATGCACTAGAACAGCTA+CGG | + | chr5_3:6761783-6761802 | Msa0794840:CDS | 40.0% | |
| TAAGGCAAGCAATTCTTCAC+AGG | + | chr5_3:6761817-6761836 | Msa0794840:CDS | 40.0% | |
| !! | CTTCACAGGTGAAGTATTGT+TGG | + | chr5_3:6761831-6761850 | Msa0794840:intron | 40.0% |
| TATATCGTGGAAAGGAAGGA+GGG | - | chr5_3:6761883-6761902 | None:intergenic | 40.0% | |
| TTATATCGTGGAAAGGAAGG+AGG | - | chr5_3:6761884-6761903 | None:intergenic | 40.0% | |
| ! | ACTTTGACCAGTCTCTTTTC+CGG | + | chr5_3:6762033-6762052 | Msa0794840:CDS | 40.0% |
| TACTTTCTCTCTCTTACCGC+CGG | + | chr5_3:6754240-6754259 | Msa0794840:five_prime_UTR | 45.0% | |
| !! | CCGGAGATTTAATTTTCCGG+CGG | - | chr5_3:6754259-6754278 | None:intergenic | 45.0% |
| CCGCCGGAAAATTAAATCTC+CGG | + | chr5_3:6754256-6754275 | Msa0794840:five_prime_UTR | 45.0% | |
| ! | TTTTCCGTTTCCCGTTTCAC+CGG | + | chr5_3:6754283-6754302 | Msa0794840:five_prime_UTR | 45.0% |
| GTGAGAAATCTTCGGAGAGT+GGG | + | chr5_3:6754408-6754427 | Msa0794840:five_prime_UTR | 45.0% | |
| ATCTTCGGAGAGTGGGAAAA+CGG | + | chr5_3:6754415-6754434 | Msa0794840:five_prime_UTR | 45.0% | |
| GTTTGATCGATCGGTGAAGA+TGG | + | chr5_3:6754453-6754472 | Msa0794840:exon | 45.0% | |
| AAGATGGGAAGAGTGGTAGT+GGG | + | chr5_3:6754469-6754488 | Msa0794840:exon | 45.0% | |
| ! | AAGGCAAGTGGTTGATGCTA+TGG | + | chr5_3:6754636-6754655 | Msa0794840:CDS | 45.0% |
| ACCACCTTCAGAAGCTAAAC+CGG | - | chr5_3:6754677-6754696 | None:intergenic | 45.0% | |
| !! | GCTTTCTGGAGTACCATGTT+AGG | + | chr5_3:6755002-6755021 | Msa0794840:intron | 45.0% |
| !!! | GTTTGGATTGGTTTTGGGAG+AGG | + | chr5_3:6755237-6755256 | Msa0794840:intron | 45.0% |
| GGTTGGCATTTAACACGCTA+AGG | + | chr5_3:6755308-6755327 | Msa0794840:intron | 45.0% | |
| TTTGCGAAAAGTGATGCGCT+CGG | + | chr5_3:6755366-6755385 | Msa0794840:intron | 45.0% | |
| CAGCTAGAACCAACAATGCA+TGG | - | chr5_3:6755701-6755720 | None:intergenic | 45.0% | |
| CCAAGATGCAGCGCATAATA+TGG | - | chr5_3:6755969-6755988 | None:intergenic | 45.0% | |
| CCATATTATGCGCTGCATCT+TGG | + | chr5_3:6755966-6755985 | Msa0794840:CDS | 45.0% | |
| TATTATGCGCTGCATCTTGG+GGG | + | chr5_3:6755969-6755988 | Msa0794840:CDS | 45.0% | |
| GTAACGCGGGTTCATTTAAG+TGG | + | chr5_3:6756005-6756024 | Msa0794840:CDS | 45.0% | |
| TCTACTTCATGCTCAAGGAC+GGG | - | chr5_3:6756041-6756060 | None:intergenic | 45.0% | |
| CTCTACTTCATGCTCAAGGA+CGG | - | chr5_3:6756042-6756061 | None:intergenic | 45.0% | |
| GTCATTAGATGTGGGGGAAT+AGG | - | chr5_3:6756071-6756090 | None:intergenic | 45.0% | |
| ATTCCCCCACATCTAATGAC+TGG | + | chr5_3:6756071-6756090 | Msa0794840:CDS | 45.0% | |
| TGTGCCAGTCATTAGATGTG+GGG | - | chr5_3:6756078-6756097 | None:intergenic | 45.0% | |
| CTTGTGCCAGTCATTAGATG+TGG | - | chr5_3:6756080-6756099 | None:intergenic | 45.0% | |
| TCTAATGACTGGCACAAGCA+AGG | + | chr5_3:6756082-6756101 | Msa0794840:CDS | 45.0% | |
| CCTTCTGTCCTGTGAAGTAT+TGG | - | chr5_3:6756268-6756287 | None:intergenic | 45.0% | |
| CCAATACTTCACAGGACAGA+AGG | + | chr5_3:6756265-6756284 | Msa0794840:CDS | 45.0% | |
| CCACTTGATTAAAATGCCCG+AGG | - | chr5_3:6756337-6756356 | None:intergenic | 45.0% | |
| !! | CCTCGGGCATTTTAATCAAG+TGG | + | chr5_3:6756334-6756353 | Msa0794840:CDS | 45.0% |
| AGATGTTGCAGCATGTTTGC+AGG | + | chr5_3:6756552-6756571 | Msa0794840:CDS | 45.0% | |
| !! | CAGGAAGCATTTGCACGAAA+TGG | + | chr5_3:6756571-6756590 | Msa0794840:CDS | 45.0% |
| ! | AGGCAAGCATTGCTTTCAGA+GGG | - | chr5_3:6756684-6756703 | None:intergenic | 45.0% |
| ! | AAGGCAAGCATTGCTTTCAG+AGG | - | chr5_3:6756685-6756704 | None:intergenic | 45.0% |
| !! | TACAGTAGTAAGTTGGTGGG+TGG | + | chr5_3:6757153-6757172 | Msa0794840:intron | 45.0% |
| CAAATTTGTACTCCTGCTCC+TGG | + | chr5_3:6757594-6757613 | Msa0794840:intron | 45.0% | |
| GAAGTGATTACACTAGTGCC+AGG | - | chr5_3:6757615-6757634 | None:intergenic | 45.0% | |
| ! | TGGTATCGGGTGTGATTGTA+GGG | + | chr5_3:6757944-6757963 | Msa0794840:intron | 45.0% |
| ! | TGGACTGTTTGCCACTTCTA+CGG | + | chr5_3:6758768-6758787 | Msa0794840:CDS | 45.0% |
| ATGAATTTGGGCCGTAGAAG+TGG | - | chr5_3:6758782-6758801 | None:intergenic | 45.0% | |
| CAGCAGGTGCATCATGAATT+TGG | - | chr5_3:6758795-6758814 | None:intergenic | 45.0% | |
| ATTCATGATGCACCTGCTGT+TGG | + | chr5_3:6758796-6758815 | Msa0794840:CDS | 45.0% | |
| AATGGAAGATGGAGAGATCC+TGG | + | chr5_3:6758973-6758992 | Msa0794840:CDS | 45.0% | |
| CAATAGCACGAACGTCAACA+AGG | - | chr5_3:6759132-6759151 | None:intergenic | 45.0% | |
| CTTGTTGACGTTCGTGCTAT+TGG | + | chr5_3:6759130-6759149 | Msa0794840:CDS | 45.0% | |
| ! | TGTTGACGTTCGTGCTATTG+GGG | + | chr5_3:6759132-6759151 | Msa0794840:CDS | 45.0% |
| ATCACGTGCAGCCTAATATG+GGG | + | chr5_3:6759402-6759421 | Msa0794840:CDS | 45.0% | |
| TACTGTCACTGCTTATGGAC+AGG | + | chr5_3:6759745-6759764 | Msa0794840:intron | 45.0% | |
| GTGTGCAACAGTTGCAAATC+TGG | - | chr5_3:6759842-6759861 | None:intergenic | 45.0% | |
| ACCAGAGGATCCAAAGACTT+CGG | + | chr5_3:6760605-6760624 | Msa0794840:intron | 45.0% | |
| CATCTGTTCAATTCCTTGGC+AGG | + | chr5_3:6760797-6760816 | Msa0794840:intron | 45.0% | |
| TACGTACAAGAACCTGAGAG+AGG | + | chr5_3:6760975-6760994 | Msa0794840:intron | 45.0% | |
| ACGTACAAGAACCTGAGAGA+GGG | + | chr5_3:6760976-6760995 | Msa0794840:intron | 45.0% | |
| GAGGCTAGATGTCTACTACA+AGG | - | chr5_3:6761075-6761094 | None:intergenic | 45.0% | |
| TAGACATCTAGCCTCTCTGT+AGG | + | chr5_3:6761080-6761099 | Msa0794840:intron | 45.0% | |
| ! | GGGTTGAACTTTTGACGACT+AGG | + | chr5_3:6761266-6761285 | Msa0794840:intron | 45.0% |
| GGCTTACAACTGTTAAGTGG+AGG | + | chr5_3:6761327-6761346 | Msa0794840:intron | 45.0% | |
| GAATGTAAAGACGGATCAGG+GGG | - | chr5_3:6761648-6761667 | None:intergenic | 45.0% | |
| GCAGAATGTAAAGACGGATC+AGG | - | chr5_3:6761651-6761670 | None:intergenic | 45.0% | |
| AAAGCTCGTCTGCTGAATTC+TGG | - | chr5_3:6761673-6761692 | None:intergenic | 45.0% | |
| AGAACAGCTACGGAGCATAA+AGG | + | chr5_3:6761793-6761812 | Msa0794840:CDS | 45.0% | |
| GCTACGGAGCATAAAGGATA+AGG | + | chr5_3:6761799-6761818 | Msa0794840:CDS | 45.0% | |
| CTGACAGCTAAAAGGCAAAG+AGG | - | chr5_3:6761994-6762013 | None:intergenic | 45.0% | |
| CTCTGTGACTGACAGCTAAA+AGG | - | chr5_3:6762002-6762021 | None:intergenic | 45.0% | |
| ! | GACTGGTCAAAGTAAGGAGA+AGG | - | chr5_3:6762026-6762045 | None:intergenic | 45.0% |
| CATCAAACCGGAAAAGAGAC+TGG | - | chr5_3:6762043-6762062 | None:intergenic | 45.0% | |
| !! | ATAAAAATTAGAAATTTAAA+CGG | - | chr5_3:6754954-6754973 | None:intergenic | 5.0% |
| !!! | TTTTATTTAAATTTTGTTTA+TGG | + | chr5_3:6755089-6755108 | Msa0794840:intron | 5.0% |
| !! | NNNNNNNNNTATGATTTATT+TGG | + | chr5_3:6757048-6757067 | Msa0794840:intron | 5.0% |
| AACTCCGGTGAAACGGGAAA+CGG | - | chr5_3:6754290-6754309 | None:intergenic | 50.0% | |
| GGTGAGAAATCTTCGGAGAG+TGG | + | chr5_3:6754407-6754426 | Msa0794840:five_prime_UTR | 50.0% | |
| ATCGGTGAAGATGGGAAGAG+TGG | + | chr5_3:6754462-6754481 | Msa0794840:exon | 50.0% | |
| GAAGATGGGAAGAGTGGTAG+TGG | + | chr5_3:6754468-6754487 | Msa0794840:exon | 50.0% | |
| !! | AAGAGTGGTAGTGGGAGTGA+CGG | + | chr5_3:6754477-6754496 | Msa0794840:CDS | 50.0% |
| ! | GCAAGTGGTTGATGCTATGG+CGG | + | chr5_3:6754639-6754658 | Msa0794840:CDS | 50.0% |
| ACGCACATAGATGTGCCTGT+TGG | + | chr5_3:6755334-6755353 | Msa0794840:intron | 50.0% | |
| ACATAGATGTGCCTGTTGGC+CGG | + | chr5_3:6755338-6755357 | Msa0794840:intron | 50.0% | |
| ATGAAGCATGGACTCAGACG+CGG | - | chr5_3:6755496-6755515 | None:intergenic | 50.0% | |
| CGTCTGAGTCCATGCTTCAT+AGG | + | chr5_3:6755496-6755515 | Msa0794840:intron | 50.0% | |
| GGATGGGATTTAACGCGCTA+CGG | + | chr5_3:6755657-6755676 | Msa0794840:intron | 50.0% | |
| GCCAATCAAGAAGGTTCACC+CGG | + | chr5_3:6755761-6755780 | Msa0794840:intron | 50.0% | |
| ACCGGGTGAACCTTCTTGAT+TGG | - | chr5_3:6755765-6755784 | None:intergenic | 50.0% | |
| AATCAAGAAGGTTCACCCGG+TGG | + | chr5_3:6755764-6755783 | Msa0794840:intron | 50.0% | |
| GTCGCTCTACTTCATGCTCA+AGG | - | chr5_3:6756046-6756065 | None:intergenic | 50.0% | |
| GTGCCAGTCATTAGATGTGG+GGG | - | chr5_3:6756077-6756096 | None:intergenic | 50.0% | |
| TCACAGGACAGAAGGGAACT+TGG | + | chr5_3:6756273-6756292 | Msa0794840:CDS | 50.0% | |
| AGGCAGCTACATGCACATCT+AGG | - | chr5_3:6756597-6756616 | None:intergenic | 50.0% | |
| AGATGTGCATGTAGCTGCCT+TGG | + | chr5_3:6756597-6756616 | Msa0794840:CDS | 50.0% | |
| TGCATGTAGCTGCCTTGGTA+AGG | + | chr5_3:6756602-6756621 | Msa0794840:intron | 50.0% | |
| TGTTGACGGGAAGAGAAGTG+CGG | - | chr5_3:6757307-6757326 | None:intergenic | 50.0% | |
| GGTTGCAGAGATATTACCGG+CGG | - | chr5_3:6757339-6757358 | None:intergenic | 50.0% | |
| ATCAGTGTCCGTGTCGTGTA+CGG | + | chr5_3:6757412-6757431 | Msa0794840:intron | 50.0% | |
| ATTACACTAGTGCCAGGAGC+AGG | - | chr5_3:6757609-6757628 | None:intergenic | 50.0% | |
| ! | GTGGTATCGGGTGTGATTGT+AGG | + | chr5_3:6757943-6757962 | Msa0794840:intron | 50.0% |
| GCTTGCAGGTTCATCATGCT+CGG | + | chr5_3:6758437-6758456 | Msa0794840:intron | 50.0% | |
| AGGCCCAACAACTCCTCTAA+TGG | - | chr5_3:6759257-6759276 | None:intergenic | 50.0% | |
| TCCGAAGTCTTTGGATCCTC+TGG | - | chr5_3:6760609-6760628 | None:intergenic | 50.0% | |
| TCCTTGGCAGGTGCAATTCT+TGG | + | chr5_3:6760809-6760828 | Msa0794840:intron | 50.0% | |
| TCCAAGAATTGCACCTGCCA+AGG | - | chr5_3:6760813-6760832 | None:intergenic | 50.0% | |
| AAGTTTGGCAGCGTAGATGG+AGG | + | chr5_3:6760852-6760871 | Msa0794840:CDS | 50.0% | |
| AGTTTGGCAGCGTAGATGGA+GGG | + | chr5_3:6760853-6760872 | Msa0794840:CDS | 50.0% | |
| ACATCTAGCCTCTCTGTAGG+AGG | + | chr5_3:6761083-6761102 | Msa0794840:intron | 50.0% | |
| GAAAAGAGCCTCCTACAGAG+AGG | - | chr5_3:6761094-6761113 | None:intergenic | 50.0% | |
| ! | GGAGGGAGCATGCAATTACA+AGG | - | chr5_3:6761866-6761885 | None:intergenic | 50.0% |
| AAAGAAAGAAGGGGCGGCTC+CGG | - | chr5_3:6754206-6754225 | None:intergenic | 55.0% | |
| ACGGGAAACGGAAAACTCGC+CGG | - | chr5_3:6754278-6754297 | None:intergenic | 55.0% | |
| AGTGGGAAAACGGCGTCGTA+CGG | + | chr5_3:6754425-6754444 | Msa0794840:five_prime_UTR | 55.0% | |
| ! | AGTGGTTGATGCTATGGCGG+TGG | + | chr5_3:6754642-6754661 | Msa0794840:CDS | 55.0% |
| !! | CACGCCGGTTTAGCTTCTGA+AGG | + | chr5_3:6754670-6754689 | Msa0794840:CDS | 55.0% |
| ! | GCCGGTTTAGCTTCTGAAGG+TGG | + | chr5_3:6754673-6754692 | Msa0794840:CDS | 55.0% |
| !! | TCGGTGTCATGTCGTGTTGC+CGG | - | chr5_3:6755405-6755424 | None:intergenic | 55.0% |
| ACAATGCATGGCGCGTCTGT+TGG | - | chr5_3:6755689-6755708 | None:intergenic | 55.0% | |
| ACAGACGCGCCATGCATTGT+TGG | + | chr5_3:6755689-6755708 | Msa0794840:intron | 55.0% | |
| TCATGCTCAAGGACGGGAGA+TGG | - | chr5_3:6756035-6756054 | None:intergenic | 55.0% | |
| TGCAGAGATATTACCGGCGG+TGG | - | chr5_3:6757336-6757355 | None:intergenic | 55.0% | |
| GACACGGACACTGATACACG+TGG | - | chr5_3:6757407-6757426 | None:intergenic | 55.0% | |
| CATGATGCACCTGCTGTTGG+AGG | + | chr5_3:6758799-6758818 | Msa0794840:CDS | 55.0% | |
| GTTTGGCAGCGTAGATGGAG+GGG | + | chr5_3:6760854-6760873 | Msa0794840:CDS | 55.0% | |
| AGAACCTGAGAGAGGGTCCA+AGG | + | chr5_3:6760983-6761002 | Msa0794840:intron | 55.0% | |
| GAGCTCTTCCCCACTGTTAC+TGG | - | chr5_3:6761390-6761409 | None:intergenic | 55.0% | |
| CGCAAAGCAAACCGGCCAAC+AGG | - | chr5_3:6755352-6755371 | None:intergenic | 60.0% | |
| GCTCGGATACGTGTCGTGTC+CGG | + | chr5_3:6755383-6755402 | Msa0794840:intron | 60.0% | |
| ! | GAGAAGTGCGGTGACCGGAA+AGG | - | chr5_3:6757295-6757314 | None:intergenic | 60.0% |
| ! | GGGAAGAGAAGTGCGGTGAC+CGG | - | chr5_3:6757300-6757319 | None:intergenic | 60.0% |
| GATATTACCGGCGGTGGCGA+CGG | - | chr5_3:6757330-6757349 | None:intergenic | 60.0% | |
| ACGCGACACCGTACACGACA+CGG | - | chr5_3:6757423-6757442 | None:intergenic | 60.0% | |
| TGGACAGCTCCTCCAACAGC+AGG | - | chr5_3:6758811-6758830 | None:intergenic | 60.0% | |
| TGCTGTTGGAGGAGCTGTCC+AGG | + | chr5_3:6758810-6758829 | Msa0794840:CDS | 60.0% | |
| GCTGTTGGAGGAGCTGTCCA+GGG | + | chr5_3:6758811-6758830 | Msa0794840:CDS | 60.0% | |
| !! | TTGGCCTTGGACCCTCTCTC+AGG | - | chr5_3:6760990-6761009 | None:intergenic | 60.0% |
| !! | GGTAGTGGGAGTGACGGCGA+CGG | + | chr5_3:6754483-6754502 | Msa0794840:CDS | 65.0% |
| ATGGCGGTGGAGATGCACGC+CGG | + | chr5_3:6754655-6754674 | Msa0794840:CDS | 65.0% | |
| AGTGGGAGTGACGGCGACGG+TGG | + | chr5_3:6754486-6754505 | Msa0794840:CDS | 70.0% | |
| !! | GCGGTGGCGACGGTGTTGAC+GGG | - | chr5_3:6757320-6757339 | None:intergenic | 70.0% |
| ! | GGCGGTGGCGACGGTGTTGA+CGG | - | chr5_3:6757321-6757340 | None:intergenic | 70.0% |
| GTCAACACCGTCGCCACCGC+CGG | + | chr5_3:6757320-6757339 | Msa0794840:intron | 70.0% | |
| GGGAGTGACGGCGACGGTGG+CGG | + | chr5_3:6754489-6754508 | Msa0794840:CDS | 75.0% | |
| ! | AGTGACGGCGACGGTGGCGG+TGG | + | chr5_3:6754492-6754511 | Msa0794840:CDS | 75.0% |
| !! | GACGGCGACGGTGGCGGTGG+CGG | + | chr5_3:6754495-6754514 | Msa0794840:CDS | 80.0% |
| !! | GGTGGCGGTGGCGGCGTGTG+CGG | + | chr5_3:6754504-6754523 | Msa0794840:CDS | 80.0% |
| !! | GGTGGCGGCGTGTGCGGTGG+CGG | + | chr5_3:6754510-6754529 | Msa0794840:CDS | 80.0% |
| !! | GGCGGTGGCGGCGTGTGCGG+TGG | + | chr5_3:6754507-6754526 | Msa0794840:CDS | 85.0% |
| !! | GGCGGCGTGTGCGGTGGCGG+CGG | + | chr5_3:6754513-6754532 | Msa0794840:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 6754203 | 6762085 | 6754203 | ID=Msa0794840;Name=Msa0794840 |
| chr5_3 | mRNA | 6754203 | 6762085 | 6754203 | ID=Msa0794840-mRNA-1;Parent=Msa0794840;Name=Msa0794840-mRNA-1;_AED=0.25;_eAED=0.25;_QI=269|0.81|0.66|1|1|1|12|0|673 |
| chr5_3 | exon | 6754203 | 6754743 | 6754203 | ID=Msa0794840-mRNA-1:exon:2731;Parent=Msa0794840-mRNA-1 |
| chr5_3 | exon | 6755953 | 6756103 | 6755953 | ID=Msa0794840-mRNA-1:exon:2732;Parent=Msa0794840-mRNA-1 |
| chr5_3 | exon | 6756207 | 6756383 | 6756207 | ID=Msa0794840-mRNA-1:exon:2733;Parent=Msa0794840-mRNA-1 |
| chr5_3 | exon | 6756544 | 6756618 | 6756544 | ID=Msa0794840-mRNA-1:exon:2734;Parent=Msa0794840-mRNA-1 |
| chr5_3 | exon | 6758445 | 6758872 | 6758445 | ID=Msa0794840-mRNA-1:exon:2735;Parent=Msa0794840-mRNA-1 |
| chr5_3 | exon | 6758973 | 6759201 | 6758973 | ID=Msa0794840-mRNA-1:exon:2736;Parent=Msa0794840-mRNA-1 |
| chr5_3 | exon | 6759344 | 6759508 | 6759344 | ID=Msa0794840-mRNA-1:exon:2737;Parent=Msa0794840-mRNA-1 |
| chr5_3 | exon | 6760610 | 6760678 | 6760610 | ID=Msa0794840-mRNA-1:exon:2738;Parent=Msa0794840-mRNA-1 |
| chr5_3 | exon | 6760819 | 6760875 | 6760819 | ID=Msa0794840-mRNA-1:exon:2739;Parent=Msa0794840-mRNA-1 |
| chr5_3 | exon | 6761455 | 6761574 | 6761455 | ID=Msa0794840-mRNA-1:exon:2740;Parent=Msa0794840-mRNA-1 |
| chr5_3 | exon | 6761674 | 6761838 | 6761674 | ID=Msa0794840-mRNA-1:exon:2741;Parent=Msa0794840-mRNA-1 |
| chr5_3 | exon | 6761972 | 6762085 | 6761972 | ID=Msa0794840-mRNA-1:exon:2742;Parent=Msa0794840-mRNA-1 |
| chr5_3 | five_prime_UTR | 6754203 | 6754471 | 6754203 | ID=Msa0794840-mRNA-1:five_prime_utr;Parent=Msa0794840-mRNA-1 |
| chr5_3 | CDS | 6754472 | 6754743 | 6754472 | ID=Msa0794840-mRNA-1:cds;Parent=Msa0794840-mRNA-1 |
| chr5_3 | CDS | 6755953 | 6756103 | 6755953 | ID=Msa0794840-mRNA-1:cds;Parent=Msa0794840-mRNA-1 |
| chr5_3 | CDS | 6756207 | 6756383 | 6756207 | ID=Msa0794840-mRNA-1:cds;Parent=Msa0794840-mRNA-1 |
| chr5_3 | CDS | 6756544 | 6756618 | 6756544 | ID=Msa0794840-mRNA-1:cds;Parent=Msa0794840-mRNA-1 |
| chr5_3 | CDS | 6758445 | 6758872 | 6758445 | ID=Msa0794840-mRNA-1:cds;Parent=Msa0794840-mRNA-1 |
| chr5_3 | CDS | 6758973 | 6759201 | 6758973 | ID=Msa0794840-mRNA-1:cds;Parent=Msa0794840-mRNA-1 |
| chr5_3 | CDS | 6759344 | 6759508 | 6759344 | ID=Msa0794840-mRNA-1:cds;Parent=Msa0794840-mRNA-1 |
| chr5_3 | CDS | 6760610 | 6760678 | 6760610 | ID=Msa0794840-mRNA-1:cds;Parent=Msa0794840-mRNA-1 |
| chr5_3 | CDS | 6760819 | 6760875 | 6760819 | ID=Msa0794840-mRNA-1:cds;Parent=Msa0794840-mRNA-1 |
| chr5_3 | CDS | 6761455 | 6761574 | 6761455 | ID=Msa0794840-mRNA-1:cds;Parent=Msa0794840-mRNA-1 |
| chr5_3 | CDS | 6761674 | 6761838 | 6761674 | ID=Msa0794840-mRNA-1:cds;Parent=Msa0794840-mRNA-1 |
| chr5_3 | CDS | 6761972 | 6762085 | 6761972 | ID=Msa0794840-mRNA-1:cds;Parent=Msa0794840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
