Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0388650 | XP_013450280.1 | 97.297 | 407 | 11 | 0 | 1 | 407 | 1 | 407 | 0.0 | 803 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0388650 | sp|Q9SF09|ANT1_ARATH | 63.895 | 421 | 137 | 3 | 2 | 407 | 12 | 432 | 0.0 | 546 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0388650 | A0A072U589 | 97.297 | 407 | 11 | 0 | 1 | 407 | 1 | 407 | 0.0 | 803 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003220 | Msa0388650 | 0.800752 | 1.243873e-48 | -8.615850e-47 |
| Msa0005270 | Msa0388650 | 0.808353 | 3.228455e-50 | -8.615850e-47 |
| Msa0017320 | Msa0388650 | 0.821630 | 3.645705e-53 | -8.615850e-47 |
| Msa0021210 | Msa0388650 | 0.828950 | 6.759413e-55 | -8.615850e-47 |
| Msa0029850 | Msa0388650 | 0.806420 | 8.298713e-50 | -8.615850e-47 |
| Msa0045550 | Msa0388650 | 0.841100 | 5.832524e-58 | -8.615850e-47 |
| Msa0046560 | Msa0388650 | 0.861487 | 9.908744e-64 | -8.615850e-47 |
| Msa0055070 | Msa0388650 | 0.826348 | 2.850685e-54 | -8.615850e-47 |
| Msa0059890 | Msa0388650 | 0.803709 | 3.062441e-49 | -8.615850e-47 |
| Msa0074750 | Msa0388650 | 0.813760 | 2.174361e-51 | -8.615850e-47 |
| Msa0077180 | Msa0388650 | 0.810812 | 9.567994e-51 | -8.615850e-47 |
| Msa0077450 | Msa0388650 | 0.811080 | 8.370035e-51 | -8.615850e-47 |
| Msa0081940 | Msa0388650 | 0.805466 | 1.316927e-49 | -8.615850e-47 |
| Msa0090390 | Msa0388650 | 0.843130 | 1.693266e-58 | -8.615850e-47 |
| Msa0090660 | Msa0388650 | 0.803402 | 3.546421e-49 | -8.615850e-47 |
| Msa0092440 | Msa0388650 | 0.808699 | 2.723483e-50 | -8.615850e-47 |
| Msa0096580 | Msa0388650 | 0.808950 | 2.407285e-50 | -8.615850e-47 |
| Msa0101020 | Msa0388650 | 0.830144 | 3.464423e-55 | -8.615850e-47 |
| Msa0114430 | Msa0388650 | 0.806343 | 8.614029e-50 | -8.615850e-47 |
| Msa0119320 | Msa0388650 | 0.811435 | 7.011460e-51 | -8.615850e-47 |
| Msa0119440 | Msa0388650 | 0.805912 | 1.061710e-49 | -8.615850e-47 |
| Msa0126790 | Msa0388650 | 0.807202 | 5.671794e-50 | -8.615850e-47 |
| Msa0128430 | Msa0388650 | 0.801105 | 1.053311e-48 | -8.615850e-47 |
| Msa0130720 | Msa0388650 | 0.818436 | 1.962487e-52 | -8.615850e-47 |
| Msa0137870 | Msa0388650 | 0.839039 | 2.011428e-57 | -8.615850e-47 |
| Msa0138210 | Msa0388650 | 0.831817 | 1.345903e-55 | -8.615850e-47 |
| Msa0138520 | Msa0388650 | 0.806753 | 7.057453e-50 | -8.615850e-47 |
| Msa0139670 | Msa0388650 | 0.853813 | 1.864892e-61 | -8.615850e-47 |
| Msa0145110 | Msa0388650 | 0.817594 | 3.041618e-52 | -8.615850e-47 |
| Msa0169820 | Msa0388650 | 0.804483 | 2.114219e-49 | -8.615850e-47 |
| Msa0171980 | Msa0388650 | 0.821637 | 3.631572e-53 | -8.615850e-47 |
| Msa0175050 | Msa0388650 | 0.842989 | 1.845817e-58 | -8.615850e-47 |
| Msa0183420 | Msa0388650 | 0.813939 | 1.985108e-51 | -8.615850e-47 |
| Msa0187490 | Msa0388650 | 0.803980 | 2.690114e-49 | -8.615850e-47 |
| Msa0187830 | Msa0388650 | 0.819691 | 1.016637e-52 | -8.615850e-47 |
| Msa0192640 | Msa0388650 | 0.806357 | 8.557774e-50 | -8.615850e-47 |
| Msa0194010 | Msa0388650 | 0.849437 | 3.236507e-60 | -8.615850e-47 |
| Msa0200650 | Msa0388650 | 0.813807 | 2.122895e-51 | -8.615850e-47 |
| Msa0202930 | Msa0388650 | 0.809315 | 2.011008e-50 | -8.615850e-47 |
| Msa0220730 | Msa0388650 | 0.809902 | 1.504258e-50 | -8.615850e-47 |
| Msa0226180 | Msa0388650 | 0.821584 | 3.736504e-53 | -8.615850e-47 |
| Msa0227230 | Msa0388650 | 0.802419 | 5.662135e-49 | -8.615850e-47 |
| Msa0232340 | Msa0388650 | 0.810332 | 1.214797e-50 | -8.615850e-47 |
| Msa0233380 | Msa0388650 | 0.833509 | 5.120084e-56 | -8.615850e-47 |
| Msa0235880 | Msa0388650 | 0.862032 | 6.753426e-64 | -8.615850e-47 |
| Msa0236770 | Msa0388650 | 0.815087 | 1.106474e-51 | -8.615850e-47 |
| Msa0238030 | Msa0388650 | 0.803404 | 3.543627e-49 | -8.615850e-47 |
| Msa0376600 | Msa0388650 | 0.804799 | 1.816268e-49 | -8.615850e-47 |
| Msa0377440 | Msa0388650 | 0.829940 | 3.885039e-55 | -8.615850e-47 |
| Msa0382370 | Msa0388650 | 0.847492 | 1.117569e-59 | -8.615850e-47 |
| Msa0387050 | Msa0388650 | 0.812247 | 4.665956e-51 | -8.615850e-47 |
| Msa0387810 | Msa0388650 | 0.818017 | 2.441085e-52 | -8.615850e-47 |
| Msa0388650 | Msa0390530 | 0.809640 | 1.711912e-50 | -8.615850e-47 |
| Msa0388650 | Msa0390960 | 0.826902 | 2.102528e-54 | -8.615850e-47 |
| Msa0388650 | Msa0395980 | 0.821427 | 4.061447e-53 | -8.615850e-47 |
| Msa0388650 | Msa0398200 | 0.839694 | 1.359366e-57 | -8.615850e-47 |
| Msa0388650 | Msa0403490 | 0.809356 | 1.970149e-50 | -8.615850e-47 |
| Msa0388650 | Msa0403770 | 0.805257 | 1.456448e-49 | -8.615850e-47 |
| Msa0388650 | Msa0422180 | 0.812592 | 3.923700e-51 | -8.615850e-47 |
| Msa0388650 | Msa0432160 | 0.835934 | 1.256660e-56 | -8.615850e-47 |
| Msa0388650 | Msa0432670 | 0.815191 | 1.049193e-51 | -8.615850e-47 |
| Msa0388650 | Msa0436190 | 0.811193 | 7.914545e-51 | -8.615850e-47 |
| Msa0388650 | Msa0442310 | 0.816089 | 6.617463e-52 | -8.615850e-47 |
| Msa0388650 | Msa0443430 | 0.826872 | 2.137050e-54 | -8.615850e-47 |
| Msa0388650 | Msa0476680 | 0.831624 | 1.502065e-55 | -8.615850e-47 |
| Msa0388650 | Msa0481970 | 0.813094 | 3.046572e-51 | -8.615850e-47 |
| Msa0388650 | Msa0482040 | 0.801619 | 8.267540e-49 | -8.615850e-47 |
| Msa0388650 | Msa0482180 | 0.812004 | 5.273481e-51 | -8.615850e-47 |
| Msa0388650 | Msa0482940 | 0.822795 | 1.956274e-53 | -8.615850e-47 |
| Msa0388650 | Msa0483740 | 0.810251 | 1.265051e-50 | -8.615850e-47 |
| Msa0388650 | Msa0485490 | 0.817528 | 3.147803e-52 | -8.615850e-47 |
| Msa0388650 | Msa0489660 | 0.823207 | 1.568022e-53 | -8.615850e-47 |
| Msa0388650 | Msa0491000 | 0.815125 | 1.085305e-51 | -8.615850e-47 |
| Msa0388650 | Msa0514610 | 0.824105 | 9.664665e-54 | -8.615850e-47 |
| Msa0388650 | Msa0517650 | 0.815206 | 1.041138e-51 | -8.615850e-47 |
| Msa0388650 | Msa0518960 | 0.816650 | 4.956264e-52 | -8.615850e-47 |
| Msa0388650 | Msa0521010 | 0.834106 | 3.629664e-56 | -8.615850e-47 |
| Msa0388650 | Msa0534410 | 0.800291 | 1.544255e-48 | -8.615850e-47 |
| Msa0388650 | Msa0537770 | 0.801815 | 7.535280e-49 | -8.615850e-47 |
| Msa0388650 | Msa0566350 | 0.809443 | 1.887347e-50 | -8.615850e-47 |
| Msa0388650 | Msa0566750 | 0.809881 | 1.519354e-50 | -8.615850e-47 |
| Msa0388650 | Msa0567240 | 0.809482 | 1.851129e-50 | -8.615850e-47 |
| Msa0388650 | Msa0583670 | 0.804395 | 2.205330e-49 | -8.615850e-47 |
| Msa0388650 | Msa0585650 | -0.800901 | 1.159593e-48 | -8.615850e-47 |
| Msa0388650 | Msa0588220 | 0.822842 | 1.907733e-53 | -8.615850e-47 |
| Msa0388650 | Msa0592180 | 0.816159 | 6.384570e-52 | -8.615850e-47 |
| Msa0388650 | Msa0594200 | 0.823268 | 1.518063e-53 | -8.615850e-47 |
| Msa0388650 | Msa0600450 | 0.834361 | 3.133823e-56 | -8.615850e-47 |
| Msa0388650 | Msa0609220 | 0.817640 | 2.968917e-52 | -8.615850e-47 |
| Msa0388650 | Msa0621650 | 0.802826 | 4.665935e-49 | -8.615850e-47 |
| Msa0388650 | Msa0621840 | 0.809330 | 1.995575e-50 | -8.615850e-47 |
| Msa0388650 | Msa0638350 | 0.828657 | 7.957146e-55 | -8.615850e-47 |
| Msa0388650 | Msa0638360 | 0.858471 | 8.051830e-63 | -8.615850e-47 |
| Msa0388650 | Msa0640940 | 0.851486 | 8.599659e-61 | -8.615850e-47 |
| Msa0388650 | Msa0641340 | 0.831806 | 1.354469e-55 | -8.615850e-47 |
| Msa0388650 | Msa0641730 | 0.825796 | 3.854526e-54 | -8.615850e-47 |
| Msa0388650 | Msa0679360 | 0.840612 | 7.828758e-58 | -8.615850e-47 |
| Msa0388650 | Msa0682680 | 0.806096 | 9.709468e-50 | -8.615850e-47 |
| Msa0388650 | Msa0689420 | 0.826015 | 3.420175e-54 | -8.615850e-47 |
| Msa0388650 | Msa0689760 | 0.827950 | 1.178438e-54 | -8.615850e-47 |
| Msa0388650 | Msa0696850 | 0.844514 | 7.212325e-59 | -8.615850e-47 |
| Msa0388650 | Msa0696860 | 0.824434 | 8.089703e-54 | -8.615850e-47 |
| Msa0388650 | Msa0698440 | 0.840426 | 8.755942e-58 | -8.615850e-47 |
| Msa0388650 | Msa0703660 | 0.807142 | 5.840992e-50 | -8.615850e-47 |
| Msa0388650 | Msa0709120 | 0.850442 | 1.693361e-60 | -8.615850e-47 |
| Msa0388650 | Msa0709160 | 0.816692 | 4.851698e-52 | -8.615850e-47 |
| Msa0388650 | Msa0711130 | 0.827645 | 1.394992e-54 | -8.615850e-47 |
| Msa0388650 | Msa0716860 | 0.828508 | 8.646004e-55 | -8.615850e-47 |
| Msa0388650 | Msa0721340 | 0.828409 | 9.134459e-55 | -8.615850e-47 |
| Msa0388650 | Msa0732600 | 0.806662 | 7.378013e-50 | -8.615850e-47 |
| Msa0388650 | Msa0735550 | 0.807042 | 6.131695e-50 | -8.615850e-47 |
| Msa0388650 | Msa0740720 | 0.814289 | 1.662063e-51 | -8.615850e-47 |
| Msa0388650 | Msa0743530 | 0.810946 | 8.949230e-51 | -8.615850e-47 |
| Msa0388650 | Msa0750000 | 0.800179 | 1.627541e-48 | -8.615850e-47 |
| Msa0388650 | Msa0750250 | 0.841809 | 3.792952e-58 | -8.615850e-47 |
| Msa0388650 | Msa0754920 | 0.806396 | 8.395683e-50 | -8.615850e-47 |
| Msa0388650 | Msa0756380 | 0.801774 | 7.681784e-49 | -8.615850e-47 |
| Msa0388650 | Msa0758250 | 0.824706 | 6.980333e-54 | -8.615850e-47 |
| Msa0388650 | Msa0763890 | 0.814363 | 1.600391e-51 | -8.615850e-47 |
| Msa0388650 | Msa0763920 | 0.820443 | 6.842273e-53 | -8.615850e-47 |
| Msa0388650 | Msa0764920 | 0.808391 | 3.169587e-50 | -8.615850e-47 |
| Msa0388650 | Msa0780280 | 0.800743 | 1.249037e-48 | -8.615850e-47 |
| Msa0388650 | Msa0789560 | 0.869540 | 2.869341e-66 | -8.615850e-47 |
| Msa0388650 | Msa0794840 | 0.808138 | 3.588891e-50 | -8.615850e-47 |
| Msa0388650 | Msa0809140 | 0.824409 | 8.199684e-54 | -8.615850e-47 |
| Msa0388650 | Msa0812950 | 0.801270 | 9.747725e-49 | -8.615850e-47 |
| Msa0388650 | Msa0821800 | 0.807541 | 4.805654e-50 | -8.615850e-47 |
| Msa0388650 | Msa0830210 | 0.814337 | 1.621559e-51 | -8.615850e-47 |
| Msa0388650 | Msa0844110 | 0.800217 | 1.598518e-48 | -8.615850e-47 |
| Msa0388650 | Msa0857300 | 0.825622 | 4.239489e-54 | -8.615850e-47 |
| Msa0388650 | Msa0861450 | 0.816259 | 6.065049e-52 | -8.615850e-47 |
| Msa0388650 | Msa0861830 | 0.805487 | 1.303542e-49 | -8.615850e-47 |
| Msa0388650 | Msa0865970 | 0.803567 | 3.277538e-49 | -8.615850e-47 |
| Msa0388650 | Msa0866070 | 0.804695 | 1.909310e-49 | -8.615850e-47 |
| Msa0388650 | Msa0866400 | 0.813204 | 2.880548e-51 | -8.615850e-47 |
| Msa0388650 | Msa0866410 | 0.800619 | 1.323784e-48 | -8.615850e-47 |
| Msa0388650 | Msa0877710 | 0.809606 | 1.741663e-50 | -8.615850e-47 |
| Msa0388650 | Msa0890550 | 0.805943 | 1.045785e-49 | -8.615850e-47 |
| Msa0388650 | Msa0903780 | 0.815819 | 7.602001e-52 | -8.615850e-47 |
| Msa0388650 | Msa0905750 | 0.808743 | 2.665325e-50 | -8.615850e-47 |
| Msa0388650 | Msa0918390 | 0.803411 | 3.531312e-49 | -8.615850e-47 |
| Msa0388650 | Msa0921420 | 0.818875 | 1.559915e-52 | -8.615850e-47 |
| Msa0388650 | Msa0937430 | 0.815809 | 7.642439e-52 | -8.615850e-47 |
| Msa0388650 | Msa0945120 | 0.838349 | 3.032286e-57 | -8.615850e-47 |
| Msa0388650 | Msa0958030 | 0.804592 | 2.005845e-49 | -8.615850e-47 |
| Msa0388650 | Msa0960390 | 0.814443 | 1.536869e-51 | -8.615850e-47 |
| Msa0388650 | Msa0981310 | 0.827161 | 1.822564e-54 | -8.615850e-47 |
| Msa0388650 | Msa0987840 | 0.803003 | 4.289388e-49 | -8.615850e-47 |
| Msa0388650 | Msa0992580 | 0.806968 | 6.357802e-50 | -8.615850e-47 |
| Msa0388650 | Msa0992600 | 0.833528 | 5.064951e-56 | -8.615850e-47 |
| Msa0388650 | Msa0994370 | 0.810447 | 1.147701e-50 | -8.615850e-47 |
| Msa0388650 | Msa1006010 | -0.835822 | 1.341638e-56 | -8.615850e-47 |
| Msa0388650 | Msa1010460 | 0.819353 | 1.214258e-52 | -8.615850e-47 |
| Msa0388650 | Msa1034280 | 0.824153 | 9.419194e-54 | -8.615850e-47 |
| Msa0388650 | Msa1034700 | 0.811346 | 7.332031e-51 | -8.615850e-47 |
| Msa0388650 | Msa1036740 | 0.807861 | 4.109533e-50 | -8.615850e-47 |
| Msa0388650 | Msa1037520 | 0.807381 | 5.197784e-50 | -8.615850e-47 |
| Msa0388650 | Msa1040980 | 0.825138 | 5.518420e-54 | -8.615850e-47 |
| Msa0388650 | Msa1042660 | 0.807719 | 4.405978e-50 | -8.615850e-47 |
| Msa0388650 | Msa1050740 | 0.819809 | 9.557324e-53 | -8.615850e-47 |
| Msa0388650 | Msa1063420 | 0.817227 | 3.678699e-52 | -8.615850e-47 |
| Msa0388650 | Msa1068870 | 0.804636 | 1.964406e-49 | -8.615850e-47 |
| Msa0388650 | Msa1072900 | 0.819812 | 9.539906e-53 | -8.615850e-47 |
| Msa0388650 | Msa1077070 | 0.813840 | 2.087920e-51 | -8.615850e-47 |
| Msa0388650 | Msa1081220 | 0.974794 | 8.706121e-139 | -8.615850e-47 |
| Msa0388650 | Msa1081240 | 0.965213 | 2.585444e-124 | -8.615850e-47 |
| Msa0388650 | Msa1096550 | 0.807604 | 4.661420e-50 | -8.615850e-47 |
| Msa0388650 | Msa1122780 | 0.817934 | 2.548141e-52 | -8.615850e-47 |
| Msa0388650 | Msa1126570 | 0.864475 | 1.183866e-64 | -8.615850e-47 |
| Msa0388650 | Msa1127380 | 0.839511 | 1.516788e-57 | -8.615850e-47 |
| Msa0388650 | Msa1127430 | 0.862784 | 3.964347e-64 | -8.615850e-47 |
| Msa0388650 | Msa1130400 | 0.805565 | 1.255295e-49 | -8.615850e-47 |
| Msa0388650 | Msa1130530 | 0.803115 | 4.066286e-49 | -8.615850e-47 |
| Msa0388650 | Msa1131490 | 0.809466 | 1.866319e-50 | -8.615850e-47 |
| Msa0388650 | Msa1143020 | 0.813280 | 2.772422e-51 | -8.615850e-47 |
| Msa0388650 | Msa1163870 | 0.819746 | 9.877620e-53 | -8.615850e-47 |
| Msa0388650 | Msa1168550 | 0.805250 | 1.461765e-49 | -8.615850e-47 |
| Msa0388650 | Msa1168590 | 0.807476 | 4.961921e-50 | -8.615850e-47 |
| Msa0388650 | Msa1174310 | 0.824955 | 6.098304e-54 | -8.615850e-47 |
| Msa0388650 | Msa1177780 | 0.841824 | 3.759412e-58 | -8.615850e-47 |
| Msa0388650 | Msa1205480 | 0.811315 | 7.443634e-51 | -8.615850e-47 |
| Msa0388650 | Msa1205590 | 0.812644 | 3.821760e-51 | -8.615850e-47 |
| Msa0388650 | Msa1207740 | 0.814461 | 1.522318e-51 | -8.615850e-47 |
| Msa0388650 | Msa1208790 | 0.830702 | 2.530357e-55 | -8.615850e-47 |
| Msa0388650 | Msa1209190 | 0.808829 | 2.555807e-50 | -8.615850e-47 |
| Msa0388650 | Msa1209670 | 0.809313 | 2.012885e-50 | -8.615850e-47 |
| Msa0388650 | Msa1211340 | 0.819119 | 1.372958e-52 | -8.615850e-47 |
| Msa0388650 | Msa1215070 | 0.801362 | 9.330831e-49 | -8.615850e-47 |
| Msa0388650 | Msa1234620 | 0.850966 | 1.206048e-60 | -8.615850e-47 |
| Msa0388650 | Msa1254620 | 0.815597 | 8.518889e-52 | -8.615850e-47 |
| Msa0388650 | Msa1258980 | 0.822107 | 2.827013e-53 | -8.615850e-47 |
| Msa0388650 | Msa1259640 | 0.809988 | 1.441287e-50 | -8.615850e-47 |
| Msa0388650 | Msa1263290 | -0.810293 | 1.238588e-50 | -8.615850e-47 |
| Msa0388650 | Msa1270660 | 0.815898 | 7.302714e-52 | -8.615850e-47 |
| Msa0388650 | Msa1270730 | 0.800405 | 1.463600e-48 | -8.615850e-47 |
| Msa0388650 | Msa1272620 | 0.801268 | 9.756569e-49 | -8.615850e-47 |
| Msa0388650 | Msa1286550 | 0.803658 | 3.137657e-49 | -8.615850e-47 |
| Msa0388650 | Msa1289000 | 0.808628 | 2.821384e-50 | -8.615850e-47 |
| Msa0388650 | Msa1297530 | 0.821559 | 3.786915e-53 | -8.615850e-47 |
| Msa0388650 | Msa1304810 | 0.804081 | 2.563412e-49 | -8.615850e-47 |
| Msa0388650 | Msa1314770 | 0.801121 | 1.045655e-48 | -8.615850e-47 |
| Msa0388650 | Msa1329050 | -0.800995 | 1.109193e-48 | -8.615850e-47 |
| Msa0388650 | Msa1329790 | 0.816186 | 6.295401e-52 | -8.615850e-47 |
| Msa0388650 | Msa1330630 | 0.824122 | 9.574787e-54 | -8.615850e-47 |
| Msa0388650 | Msa1330780 | 0.801673 | 8.059603e-49 | -8.615850e-47 |
| Msa0388650 | Msa1332050 | 0.854868 | 9.241985e-62 | -8.615850e-47 |
| Msa0388650 | Msa1336040 | 0.862717 | 4.158560e-64 | -8.615850e-47 |
| Msa0388650 | Msa1337170 | 0.803671 | 3.119597e-49 | -8.615850e-47 |
| Msa0388650 | Msa1341490 | 0.807747 | 4.345314e-50 | -8.615850e-47 |
| Msa0388650 | Msa1357080 | 0.801280 | 9.698168e-49 | -8.615850e-47 |
| Msa0388650 | Msa1359920 | 0.821470 | 3.968704e-53 | -8.615850e-47 |
| Msa0388650 | Msa1366300 | 0.822482 | 2.313293e-53 | -8.615850e-47 |
| Msa0388650 | Msa1370590 | 0.820086 | 8.258226e-53 | -8.615850e-47 |
| Msa0388650 | Msa1372290 | 0.819970 | 8.778152e-53 | -8.615850e-47 |
| Msa0388650 | Msa1381650 | 0.807350 | 5.276677e-50 | -8.615850e-47 |
| Msa0388650 | Msa1384100 | 0.821475 | 3.959413e-53 | -8.615850e-47 |
| Msa0388650 | Msa1391720 | 0.815305 | 9.894561e-52 | -8.615850e-47 |
| Msa0388650 | Msa1392160 | -0.809689 | 1.671456e-50 | -8.615850e-47 |
| Msa0388650 | Msa1396940 | 0.808842 | 2.538580e-50 | -8.615850e-47 |
| Msa0388650 | Msa1400930 | 0.803489 | 3.402034e-49 | -8.615850e-47 |
| Msa0388650 | Msa1401460 | 0.829439 | 5.144886e-55 | -8.615850e-47 |
| Msa0388650 | Msa1411980 | 0.809118 | 2.216470e-50 | -8.615850e-47 |
| Msa0388650 | Msa1416260 | 0.802434 | 5.620003e-49 | -8.615850e-47 |
| Msa0388650 | Msa1420250 | 0.827827 | 1.261369e-54 | -8.615850e-47 |
| Msa0388650 | Msa1420270 | 0.809072 | 2.267311e-50 | -8.615850e-47 |
| Msa0388650 | Msa1422810 | 0.802091 | 6.614438e-49 | -8.615850e-47 |
| Msa0388650 | Msa1426910 | 0.850641 | 1.489413e-60 | -8.615850e-47 |
| Msa0388650 | Msa1433220 | 0.843232 | 1.590371e-58 | -8.615850e-47 |
| Msa0388650 | Msa1434040 | 0.827368 | 1.625741e-54 | -8.615850e-47 |
| Msa0388650 | Msa1442790 | 0.819521 | 1.112033e-52 | -8.615850e-47 |
| Msa0388650 | Msa1443610 | 0.831282 | 1.823637e-55 | -8.615850e-47 |
| Msa0388650 | Msa1444120 | 0.823927 | 1.064149e-53 | -8.615850e-47 |
| Msa0388650 | Msa1444260 | 0.817814 | 2.713482e-52 | -8.615850e-47 |
| Msa0388650 | Msa1446080 | 0.809660 | 1.695087e-50 | -8.615850e-47 |
| Msa0388650 | Msa1447890 | 0.812375 | 4.377008e-51 | -8.615850e-47 |
| Msa0388650 | Msa1454960 | 0.831085 | 2.037970e-55 | -8.615850e-47 |
| Msa0388650 | Msa1456230 | 0.870169 | 1.787895e-66 | -8.615850e-47 |
| Msa0388650 | Msa1458340 | 0.823530 | 1.317967e-53 | -8.615850e-47 |
| Msa0388650 | Msa1463030 | 0.805470 | 1.314288e-49 | -8.615850e-47 |
| Msa0240270 | Msa0388650 | 0.814549 | 1.455741e-51 | -8.615850e-47 |
| Msa0244970 | Msa0388650 | 0.811608 | 6.431538e-51 | -8.615850e-47 |
| Msa0249550 | Msa0388650 | 0.825258 | 5.170047e-54 | -8.615850e-47 |
| Msa0262370 | Msa0388650 | 0.807139 | 5.848666e-50 | -8.615850e-47 |
| Msa0266240 | Msa0388650 | 0.801320 | 9.519593e-49 | -8.615850e-47 |
| Msa0269520 | Msa0388650 | 0.800890 | 1.165446e-48 | -8.615850e-47 |
| Msa0271580 | Msa0388650 | 0.805506 | 1.291546e-49 | -8.615850e-47 |
| Msa0271790 | Msa0388650 | 0.817229 | 3.674583e-52 | -8.615850e-47 |
| Msa0277420 | Msa0388650 | 0.822398 | 2.420107e-53 | -8.615850e-47 |
| Msa0283420 | Msa0388650 | 0.810553 | 1.088722e-50 | -8.615850e-47 |
| Msa0287790 | Msa0388650 | 0.800861 | 1.181780e-48 | -8.615850e-47 |
| Msa0296790 | Msa0388650 | 0.808854 | 2.524299e-50 | -8.615850e-47 |
| Msa0300150 | Msa0388650 | 0.800925 | 1.146615e-48 | -8.615850e-47 |
| Msa0304840 | Msa0388650 | 0.854075 | 1.566730e-61 | -8.615850e-47 |
| Msa0310430 | Msa0388650 | 0.821036 | 4.996909e-53 | -8.615850e-47 |
| Msa0319290 | Msa0388650 | 0.800645 | 1.308027e-48 | -8.615850e-47 |
| Msa0336310 | Msa0388650 | 0.800291 | 1.543863e-48 | -8.615850e-47 |
| Msa0336320 | Msa0388650 | 0.802095 | 6.600166e-49 | -8.615850e-47 |
| Msa0337590 | Msa0388650 | 0.803434 | 3.492160e-49 | -8.615850e-47 |
| Msa0341230 | Msa0388650 | 0.858702 | 6.872463e-63 | -8.615850e-47 |
| Msa0341840 | Msa0388650 | 0.812853 | 3.439523e-51 | -8.615850e-47 |
| Msa0347950 | Msa0388650 | 0.829100 | 6.219384e-55 | -8.615850e-47 |
| Msa0347990 | Msa0388650 | 0.835527 | 1.593123e-56 | -8.615850e-47 |
| Msa0351330 | Msa0388650 | 0.811208 | 7.852565e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0388650 | MtrunA17_Chr7g0268151 | 98.513 | 269 | 4 | 0 | 139 | 407 | 1 | 269 | 0.0 | 534 |
| Msa0388650 | MtrunA17_Chr5g0407141 | 37.440 | 414 | 229 | 7 | 3 | 404 | 19 | 414 | 1.12e-74 | 238 |
| Msa0388650 | MtrunA17_Chr8g0370311 | 37.681 | 414 | 231 | 5 | 4 | 407 | 12 | 408 | 2.33e-73 | 235 |
| Msa0388650 | MtrunA17_Chr8g0361631 | 27.842 | 431 | 259 | 13 | 1 | 407 | 1 | 403 | 2.06e-34 | 132 |
| Msa0388650 | MtrunA17_Chr7g0217401 | 25.829 | 422 | 277 | 11 | 2 | 407 | 26 | 427 | 1.43e-30 | 121 |
| Msa0388650 | MtrunA17_Chr8g0361641 | 26.562 | 384 | 251 | 10 | 34 | 407 | 1 | 363 | 1.46e-29 | 117 |
| Msa0388650 | MtrunA17_Chr7g0217381 | 25.118 | 422 | 281 | 11 | 1 | 407 | 25 | 426 | 1.87e-29 | 118 |
| Msa0388650 | MtrunA17_Chr3g0090101 | 25.879 | 398 | 262 | 11 | 21 | 407 | 5 | 380 | 9.51e-26 | 107 |
| Msa0388650 | MtrunA17_Chr3g0105861 | 25.121 | 414 | 281 | 9 | 4 | 407 | 33 | 427 | 4.28e-25 | 106 |
| Msa0388650 | MtrunA17_Chr8g0361211 | 24.557 | 395 | 267 | 8 | 17 | 401 | 68 | 441 | 1.13e-24 | 105 |
| Msa0388650 | MtrunA17_Chr8g0361591 | 29.023 | 348 | 217 | 8 | 34 | 372 | 1 | 327 | 3.30e-24 | 102 |
| Msa0388650 | MtrunA17_Chr4g0022261 | 24.257 | 404 | 278 | 8 | 14 | 407 | 135 | 520 | 3.49e-24 | 104 |
| Msa0388650 | MtrunA17_Chr7g0256281 | 26.683 | 401 | 257 | 11 | 17 | 407 | 146 | 519 | 1.33e-23 | 102 |
| Msa0388650 | MtrunA17_Chr1g0171021 | 29.167 | 264 | 168 | 6 | 17 | 272 | 157 | 409 | 3.95e-23 | 100 |
| Msa0388650 | MtrunA17_Chr1g0199431 | 31.690 | 284 | 164 | 9 | 1 | 273 | 143 | 407 | 5.11e-23 | 100 |
| Msa0388650 | MtrunA17_Chr7g0239021 | 26.799 | 403 | 249 | 13 | 3 | 381 | 138 | 518 | 1.55e-17 | 84.7 |
| Msa0388650 | MtrunA17_Chr7g0239011 | 25.127 | 394 | 256 | 12 | 6 | 381 | 50 | 422 | 2.87e-16 | 80.5 |
| Msa0388650 | MtrunA17_Chr8g0376991 | 20.241 | 415 | 300 | 9 | 1 | 397 | 14 | 415 | 3.47e-15 | 77.0 |
| Msa0388650 | MtrunA17_Chr3g0122241 | 25.432 | 405 | 270 | 11 | 9 | 400 | 74 | 459 | 1.34e-14 | 75.5 |
| Msa0388650 | MtrunA17_Chr3g0077651 | 22.705 | 414 | 285 | 12 | 6 | 397 | 48 | 448 | 1.50e-14 | 75.1 |
| Msa0388650 | MtrunA17_Chr7g0256251 | 28.090 | 267 | 168 | 7 | 17 | 273 | 146 | 398 | 3.91e-14 | 73.6 |
| Msa0388650 | MtrunA17_Chr1g0184721 | 23.876 | 356 | 238 | 13 | 34 | 371 | 47 | 387 | 4.01e-14 | 73.6 |
| Msa0388650 | MtrunA17_Chr8g0366021 | 22.196 | 419 | 269 | 10 | 21 | 403 | 55 | 452 | 1.15e-12 | 69.3 |
| Msa0388650 | MtrunA17_Chr6g0458921 | 22.738 | 409 | 284 | 11 | 4 | 393 | 8 | 403 | 1.23e-12 | 68.9 |
| Msa0388650 | MtrunA17_Chr2g0328081 | 21.707 | 410 | 291 | 10 | 2 | 393 | 6 | 403 | 2.18e-12 | 68.2 |
| Msa0388650 | MtrunA17_Chr6g0459031 | 22.141 | 411 | 288 | 11 | 2 | 393 | 6 | 403 | 2.34e-12 | 68.2 |
| Msa0388650 | MtrunA17_Chr6g0459021 | 20.570 | 316 | 231 | 7 | 6 | 306 | 30 | 340 | 1.16e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0388650 | AT3G11900.2 | 63.895 | 421 | 137 | 3 | 2 | 407 | 12 | 432 | 0.0 | 546 |
| Msa0388650 | AT3G11900.1 | 63.895 | 421 | 137 | 3 | 2 | 407 | 12 | 432 | 0.0 | 546 |
| Msa0388650 | AT4G38250.1 | 37.559 | 426 | 223 | 8 | 3 | 404 | 22 | 428 | 2.00e-83 | 262 |
| Msa0388650 | AT2G42005.1 | 37.650 | 417 | 225 | 7 | 3 | 404 | 11 | 407 | 2.26e-80 | 253 |
| Msa0388650 | AT5G65990.1 | 37.136 | 412 | 230 | 7 | 3 | 404 | 27 | 419 | 4.80e-70 | 227 |
| Msa0388650 | AT5G15240.1 | 24.289 | 387 | 265 | 8 | 28 | 404 | 48 | 416 | 3.21e-29 | 118 |
| Msa0388650 | AT2G39130.2 | 25.424 | 413 | 278 | 10 | 1 | 404 | 150 | 541 | 4.24e-27 | 113 |
| Msa0388650 | AT2G39130.1 | 25.424 | 413 | 278 | 10 | 1 | 404 | 150 | 541 | 4.24e-27 | 113 |
| Msa0388650 | AT5G02180.1 | 26.442 | 416 | 267 | 12 | 4 | 404 | 150 | 541 | 9.65e-26 | 109 |
| Msa0388650 | AT5G02180.2 | 26.442 | 416 | 267 | 12 | 4 | 404 | 150 | 541 | 9.65e-26 | 109 |
| Msa0388650 | AT3G09340.1 | 27.047 | 403 | 255 | 13 | 17 | 404 | 138 | 516 | 1.32e-23 | 103 |
| Msa0388650 | AT3G09330.1 | 27.295 | 403 | 254 | 14 | 17 | 404 | 138 | 516 | 1.44e-23 | 103 |
| Msa0388650 | AT2G41190.1 | 23.645 | 406 | 276 | 10 | 14 | 407 | 148 | 531 | 4.95e-23 | 101 |
| Msa0388650 | AT5G15240.3 | 23.529 | 340 | 237 | 6 | 75 | 404 | 4 | 330 | 1.81e-22 | 97.8 |
| Msa0388650 | AT3G54830.2 | 27.027 | 370 | 229 | 11 | 10 | 360 | 147 | 494 | 2.22e-21 | 96.7 |
| Msa0388650 | AT3G54830.1 | 27.027 | 370 | 229 | 11 | 10 | 360 | 147 | 494 | 2.22e-21 | 96.7 |
| Msa0388650 | AT2G39130.3 | 28.315 | 279 | 178 | 8 | 3 | 273 | 152 | 416 | 4.27e-21 | 95.5 |
| Msa0388650 | AT3G28960.5 | 23.171 | 410 | 264 | 11 | 13 | 401 | 16 | 395 | 4.89e-21 | 94.7 |
| Msa0388650 | AT3G28960.2 | 23.171 | 410 | 264 | 11 | 13 | 401 | 16 | 395 | 4.89e-21 | 94.7 |
| Msa0388650 | AT3G28960.3 | 23.171 | 410 | 264 | 11 | 13 | 401 | 16 | 395 | 4.89e-21 | 94.7 |
| Msa0388650 | AT3G28960.1 | 23.171 | 410 | 264 | 11 | 13 | 401 | 16 | 395 | 4.89e-21 | 94.7 |
| Msa0388650 | AT5G02170.1 | 26.434 | 401 | 261 | 13 | 17 | 404 | 139 | 518 | 9.19e-21 | 94.7 |
| Msa0388650 | AT5G16740.1 | 23.133 | 415 | 288 | 10 | 2 | 403 | 16 | 412 | 2.66e-19 | 89.7 |
| Msa0388650 | AT3G28960.4 | 24.107 | 336 | 223 | 9 | 81 | 401 | 8 | 326 | 7.53e-18 | 84.3 |
| Msa0388650 | AT5G02170.2 | 25.067 | 375 | 234 | 13 | 17 | 386 | 139 | 471 | 1.38e-15 | 79.0 |
| Msa0388650 | AT2G41190.2 | 24.252 | 301 | 203 | 8 | 14 | 303 | 148 | 434 | 2.70e-15 | 78.2 |
| Msa0388650 | AT1G24400.1 | 21.212 | 363 | 251 | 11 | 1 | 343 | 19 | 366 | 2.04e-11 | 65.9 |
| Msa0388650 | AT1G48640.1 | 22.927 | 410 | 268 | 13 | 1 | 382 | 31 | 420 | 5.37e-11 | 64.7 |
Find 100 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCTACAATCTCATTAAT+TGG | 0.119192 | 3_1:+93105975 | None:intergenic |
| ACATTTCACCTAAAATTATT+TGG | 0.180848 | 3_1:-93105765 | Msa0388650:CDS |
| AAAGTCTGAGCCAGCAATTT+TGG | 0.194534 | 3_1:+93106912 | None:intergenic |
| CGGATTGCTGGTTGGGTTGC+TGG | 0.195646 | 3_1:-93108070 | Msa0388650:CDS |
| ATGCTAGTACCAGTTGAAAT+TGG | 0.202789 | 3_1:-93107194 | Msa0388650:CDS |
| TTGAAGCTTTGAAGCTCTTT+TGG | 0.211711 | 3_1:+93108156 | None:intergenic |
| GCTTCATTTGTGCCAGAATT+TGG | 0.237616 | 3_1:-93105849 | Msa0388650:CDS |
| GAATGGATTCGTTGCTAAAA+AGG | 0.256311 | 3_1:+93108360 | None:intergenic |
| GTTGCGTATTTGGTATTTAT+TGG | 0.257482 | 3_1:-93107275 | Msa0388650:CDS |
| TGCAGGATCTGTTGCGTATT+TGG | 0.266618 | 3_1:-93107285 | Msa0388650:CDS |
| GCTTCAAAGCTTCAAACTTT+GGG | 0.276040 | 3_1:-93108148 | Msa0388650:CDS |
| TGTAGTTGGAACTGGTGTTT+TGG | 0.282817 | 3_1:-93108110 | Msa0388650:CDS |
| TTGCGTATTTGGTATTTATT+GGG | 0.311051 | 3_1:-93107274 | Msa0388650:CDS |
| AGCTTCAAAGCTTCAAACTT+TGG | 0.322711 | 3_1:-93108149 | Msa0388650:CDS |
| CGGCAATCACGTCGAACATT+GGG | 0.331674 | 3_1:-93107031 | Msa0388650:CDS |
| AATATCATTGTTACTGTAGT+TGG | 0.346950 | 3_1:-93108124 | Msa0388650:CDS |
| TTATGTGGTTACATGGCTTT+TGG | 0.362879 | 3_1:-93106855 | Msa0388650:CDS |
| AAGTAGGAGCATGCAATAAT+AGG | 0.366520 | 3_1:+93108015 | None:intergenic |
| CTTCTACAATCTCATTAATT+GGG | 0.367121 | 3_1:+93105976 | None:intergenic |
| ATTAGATACTAACACGCAAC+TGG | 0.367677 | 3_1:+93108219 | None:intergenic |
| AAACGAAAACCCATCCTCTA+AGG | 0.374336 | 3_1:+93107064 | None:intergenic |
| AGCTAAATTCCCAAAATTGC+TGG | 0.379222 | 3_1:-93106922 | Msa0388650:CDS |
| TGCTATTGTGGTGGTTGTGC+TGG | 0.379392 | 3_1:-93105880 | Msa0388650:CDS |
| GGAACTTACAACACAATTGT+TGG | 0.382897 | 3_1:-93105669 | Msa0388650:CDS |
| TTCTCTATGCCTCTGGCAAA+AGG | 0.387302 | 3_1:-93105739 | Msa0388650:CDS |
| TTGGCTCTTCTCTATGCCTC+TGG | 0.390599 | 3_1:-93105746 | Msa0388650:CDS |
| TGCTAGTACCAGTTGAAATT+GGG | 0.393945 | 3_1:-93107193 | Msa0388650:CDS |
| GACCTGGGTTATAGATGCTT+TGG | 0.394530 | 3_1:-93107356 | Msa0388650:CDS |
| TTAATTGGGTGTAACATGAT+TGG | 0.395355 | 3_1:+93105990 | None:intergenic |
| CCAATTAATGAGATTGTAGA+AGG | 0.404740 | 3_1:-93105975 | Msa0388650:CDS |
| GGTTGGGTTGCTGGCTCGCT+TGG | 0.405595 | 3_1:-93108061 | Msa0388650:CDS |
| GAGGCAAATACACCAAATTC+TGG | 0.406786 | 3_1:+93105837 | None:intergenic |
| TTAGTGGAATCAAGATCTTA+TGG | 0.409655 | 3_1:-93107380 | Msa0388650:CDS |
| GTTGCCATTTGCAGCAGGCA+TGG | 0.411945 | 3_1:-93107006 | Msa0388650:CDS |
| AGTTGTATAAAAGCTTAAAC+AGG | 0.416166 | 3_1:+93105612 | None:intergenic |
| TTGGGGAGGTGGAAAATGAA+TGG | 0.420411 | 3_1:+93108343 | None:intergenic |
| CTGGTCATCTCTTGCCGTAC+AGG | 0.421828 | 3_1:-93106790 | Msa0388650:intron |
| TATCCTTCATAGAATTCTCT+AGG | 0.427773 | 3_1:+93106946 | None:intergenic |
| TATAGATGCTTTGGAACATT+CGG | 0.429944 | 3_1:-93107347 | Msa0388650:CDS |
| TAATTGGGTGTAACATGATT+GGG | 0.432015 | 3_1:+93105991 | None:intergenic |
| GGTGTATTTGCCTCATTTGT+GGG | 0.432173 | 3_1:-93105828 | Msa0388650:CDS |
| ACAGCCATGCCTGCTGCAAA+TGG | 0.444083 | 3_1:+93107002 | None:intergenic |
| TGGTGTATTTGCCTCATTTG+TGG | 0.444849 | 3_1:-93105829 | Msa0388650:CDS |
| ATTGTTACTGTAGTTGGAAC+TGG | 0.462436 | 3_1:-93108118 | Msa0388650:CDS |
| ATTAAGAGTCACAATGTCTC+TGG | 0.463981 | 3_1:+93106824 | None:intergenic |
| CATGACATCCCAATTTCAAC+TGG | 0.479088 | 3_1:+93107185 | None:intergenic |
| TCGCTTGGTGTTGCTATCGT+TGG | 0.480171 | 3_1:-93108046 | Msa0388650:CDS |
| CTATAACATGTGTTTGATCA+TGG | 0.483240 | 3_1:-93108296 | Msa0388650:five_prime_UTR |
| AGATGTACGAGTGGCCTTAG+AGG | 0.486364 | 3_1:-93107078 | Msa0388650:CDS |
| TAAGTAAAATTAGGGTTCAT+CGG | 0.488206 | 3_1:+93108273 | None:intergenic |
| GCAAGAGATGACCAGCTCCT+AGG | 0.507015 | 3_1:+93106798 | None:intergenic |
| GGTTTGGTGCAGAGATAAGT+TGG | 0.507286 | 3_1:-93107417 | Msa0388650:CDS |
| TACGAGTGGCCTTAGAGGAT+GGG | 0.517363 | 3_1:-93107073 | Msa0388650:CDS |
| CAGTTGAAATTGGGATGTCA+TGG | 0.517566 | 3_1:-93107184 | Msa0388650:CDS |
| ACGGCAATCACGTCGAACAT+TGG | 0.520931 | 3_1:-93107032 | Msa0388650:CDS |
| CTCTTAATCTCCCTAGGAGC+TGG | 0.522429 | 3_1:-93106809 | Msa0388650:CDS |
| CTTCAAAGCTTCAAACTTTG+GGG | 0.529013 | 3_1:-93108147 | Msa0388650:CDS |
| CAAGAGATGACCAGCTCCTA+GGG | 0.531338 | 3_1:+93106799 | None:intergenic |
| ATCAAGATCTTATGGAGACC+TGG | 0.532309 | 3_1:-93107372 | Msa0388650:CDS |
| GTACGAGTGGCCTTAGAGGA+TGG | 0.538625 | 3_1:-93107074 | Msa0388650:CDS |
| GGCATCAGAAGAGCCGTTAG+TGG | 0.542217 | 3_1:-93107396 | Msa0388650:CDS |
| TGCCCTAGAGAATTCTATGA+AGG | 0.544325 | 3_1:-93106949 | Msa0388650:CDS |
| TATGAATGTCTTTACCTGTA+CGG | 0.553018 | 3_1:+93106776 | None:intergenic |
| ACCAGCAATCCGAAAAGCAA+AGG | 0.553289 | 3_1:+93108081 | None:intergenic |
| TGGTACTAGCATAAATATGT+AGG | 0.553563 | 3_1:+93107205 | None:intergenic |
| ATACATCAGTCGTGCTATTG+TGG | 0.553742 | 3_1:-93105892 | Msa0388650:CDS |
| AAAAGAAAGCATTGCACACA+AGG | 0.559468 | 3_1:+93105800 | None:intergenic |
| ATGACAGGTAGGATTGTGCC+TGG | 0.559822 | 3_1:-93106030 | Msa0388650:intron |
| TTCCAAAGCATCTATAACCC+AGG | 0.563102 | 3_1:+93107354 | None:intergenic |
| CCAGCAATCCGAAAAGCAAA+GGG | 0.563950 | 3_1:+93108082 | None:intergenic |
| ATCCTTCATAGAATTCTCTA+GGG | 0.566292 | 3_1:+93106947 | None:intergenic |
| TGTGTGCAATGTCCTAGCTA+TGG | 0.568520 | 3_1:-93107117 | Msa0388650:CDS |
| TTAGATACTAACACGCAACT+GGG | 0.569251 | 3_1:+93108220 | None:intergenic |
| GATTATATTGTATTAATCAG+TGG | 0.569319 | 3_1:-93105711 | Msa0388650:CDS |
| TAAGATCTTGATTCCACTAA+CGG | 0.573803 | 3_1:+93107383 | None:intergenic |
| GACAGGTAGGATTGTGCCTG+GGG | 0.581164 | 3_1:-93106028 | Msa0388650:intron |
| CAAGGTACTCCCCACAAATG+AGG | 0.581605 | 3_1:+93105818 | None:intergenic |
| GATGCTTTGGAACATTCGGC+CGG | 0.581817 | 3_1:-93107343 | Msa0388650:CDS |
| TGATTAATACAATATAATCA+AGG | 0.583002 | 3_1:+93105715 | None:intergenic |
| ATCGTGGTAGCACAATGTGC+AGG | 0.583248 | 3_1:-93107302 | Msa0388650:CDS |
| TTGTGACTCTTAATCTCCCT+AGG | 0.586720 | 3_1:-93106815 | Msa0388650:CDS |
| GAAATTGGGATGTCATGGAT+AGG | 0.588699 | 3_1:-93107179 | Msa0388650:CDS |
| AGCTATGGGAATTGTAGTGA+AGG | 0.588848 | 3_1:-93107102 | Msa0388650:CDS |
| GTGTATTTGCCTCATTTGTG+GGG | 0.590797 | 3_1:-93105827 | Msa0388650:CDS |
| TCAAGATCTTATGGAGACCT+GGG | 0.593639 | 3_1:-93107371 | Msa0388650:CDS |
| TTATAAATTCTGTCAGATGC+CGG | 0.594196 | 3_1:+93107324 | None:intergenic |
| TGACAGGTAGGATTGTGCCT+GGG | 0.602408 | 3_1:-93106029 | Msa0388650:intron |
| TCACTACAATTCCCATAGCT+AGG | 0.603325 | 3_1:+93107105 | None:intergenic |
| GGCAATCACGTCGAACATTG+GGG | 0.609772 | 3_1:-93107030 | Msa0388650:CDS |
| GGAATGTGAACATAAGCCCC+AGG | 0.620030 | 3_1:+93106012 | None:intergenic |
| TCTGACAGAATTTATAATCG+TGG | 0.625652 | 3_1:-93107318 | Msa0388650:CDS |
| AATAATGATTCAATAAGACT+AGG | 0.630124 | 3_1:-93105927 | Msa0388650:CDS |
| TACTAGCATAAATATGTAGG+AGG | 0.630914 | 3_1:+93107208 | None:intergenic |
| GTGTGCAATGTCCTAGCTAT+GGG | 0.634606 | 3_1:-93107116 | Msa0388650:CDS |
| AATATGTAGGAGGCAAGCGA+TGG | 0.653012 | 3_1:+93107218 | None:intergenic |
| CAATCACGTCGAACATTGGG+GGG | 0.667136 | 3_1:-93107028 | Msa0388650:CDS |
| CATCAGTCGTGCTATTGTGG+TGG | 0.682697 | 3_1:-93105889 | Msa0388650:CDS |
| AGTGAAGGAAGATGTACGAG+TGG | 0.702478 | 3_1:-93107087 | Msa0388650:CDS |
| TAGATACTAACACGCAACTG+GGG | 0.703401 | 3_1:+93108221 | None:intergenic |
| GCAATCACGTCGAACATTGG+GGG | 0.711818 | 3_1:-93107029 | Msa0388650:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAGTAGTAAAAAAATAAAA+AGG | + | chr3_1:93106226-93106245 | None:intergenic | 10.0% |
| !! | ATCCAAATTTATGAAAAATT+GGG | + | chr3_1:93105736-93105755 | None:intergenic | 15.0% |
| !! | TATCCAAATTTATGAAAAAT+TGG | + | chr3_1:93105737-93105756 | None:intergenic | 15.0% |
| !!! | TTACTACTATTCTTTTTTAT+TGG | - | chr3_1:93106236-93106255 | Msa0388650:intron | 15.0% |
| !!! | TACTACTATTCTTTTTTATT+GGG | - | chr3_1:93106237-93106256 | Msa0388650:intron | 15.0% |
| !! | TGATTAATACAATATAATCA+AGG | + | chr3_1:93108266-93108285 | None:intergenic | 15.0% |
| !!! | GGGAATTTTAAGTAAAATTA+GGG | + | chr3_1:93105716-93105735 | None:intergenic | 20.0% |
| !!! | TGGGAATTTTAAGTAAAATT+AGG | + | chr3_1:93105717-93105736 | None:intergenic | 20.0% |
| !!! | TTCCCAATTTTTCATAAATT+TGG | - | chr3_1:93105731-93105750 | Msa0388650:CDS | 20.0% |
| !! | ATCTAATTTCGACAAAAAAA+TGG | - | chr3_1:93105775-93105794 | Msa0388650:CDS | 20.0% |
| !!! | ACTACTATTCTTTTTTATTG+GGG | - | chr3_1:93106238-93106257 | Msa0388650:intron | 20.0% |
| !! | TAGATTATTCCATTACTAAA+AGG | - | chr3_1:93106300-93106319 | Msa0388650:intron | 20.0% |
| !!! | ACATTAACATCTCAAATTTT+AGG | - | chr3_1:93107798-93107817 | Msa0388650:intron | 20.0% |
| !!! | CATTAACATCTCAAATTTTA+GGG | - | chr3_1:93107799-93107818 | Msa0388650:intron | 20.0% |
| !!! | AATTTCGTTATTTTTCCTAT+TGG | - | chr3_1:93107893-93107912 | Msa0388650:intron | 20.0% |
| !! | AATAATGATTCAATAAGACT+AGG | - | chr3_1:93108051-93108070 | Msa0388650:CDS | 20.0% |
| !!! | AAATAATTTTAGGTGAAATG+TGG | + | chr3_1:93108214-93108233 | None:intergenic | 20.0% |
| !! | ACATTTCACCTAAAATTATT+TGG | - | chr3_1:93108213-93108232 | Msa0388650:five_prime_UTR | 20.0% |
| !! | GATTATATTGTATTAATCAG+TGG | - | chr3_1:93108267-93108286 | Msa0388650:five_prime_UTR | 20.0% |
| ! | TAAGTAAAATTAGGGTTCAT+CGG | + | chr3_1:93105708-93105727 | None:intergenic | 25.0% |
| ! | AATATCATTGTTACTGTAGT+TGG | - | chr3_1:93105854-93105873 | Msa0388650:CDS | 25.0% |
| ! | TATAACATTTGTGAAAGTAG+TGG | + | chr3_1:93106195-93106214 | None:intergenic | 25.0% |
| ! | TGGAATAATCTAATCTAAGT+CGG | + | chr3_1:93106292-93106311 | None:intergenic | 25.0% |
| !!! | AAATTGGTTCCTTTTAGTAA+TGG | + | chr3_1:93106312-93106331 | None:intergenic | 25.0% |
| !! | GGAACCAATTTAAAGTAATA+CGG | - | chr3_1:93106321-93106340 | Msa0388650:intron | 25.0% |
| ! | TGTTCCGTATTACTTTAAAT+TGG | + | chr3_1:93106328-93106347 | None:intergenic | 25.0% |
| !!! | GATTTTGATTTCATTGATAC+AGG | - | chr3_1:93106540-93106559 | Msa0388650:intron | 25.0% |
| ! | TTGCGTATTTGGTATTTATT+GGG | - | chr3_1:93106704-93106723 | Msa0388650:intron | 25.0% |
| !!! | ATTTTTGGAATACAGAATCA+AGG | + | chr3_1:93106735-93106754 | None:intergenic | 25.0% |
| ! | GATTCTGTATTCCAAAAATA+TGG | - | chr3_1:93106736-93106755 | Msa0388650:intron | 25.0% |
| ! | GTGAAAGCAAAATATATACA+TGG | + | chr3_1:93107238-93107257 | None:intergenic | 25.0% |
| ! | TGGAAATTTATTATGTGCAT+TGG | - | chr3_1:93107690-93107709 | Msa0388650:intron | 25.0% |
| ! | AATTTATCCTTAGATGTCTA+CGG | - | chr3_1:93107714-93107733 | Msa0388650:intron | 25.0% |
| ! | AAATTTCCAATGCACATAAT+TGG | + | chr3_1:93107679-93107698 | None:intergenic | 25.0% |
| !! | TTTGTTGTAGACATGTATAA+AGG | + | chr3_1:93107769-93107788 | None:intergenic | 25.0% |
| ! | AACAAAATATTATGAACTCC+TGG | + | chr3_1:93107861-93107880 | None:intergenic | 25.0% |
| ! | CTTCTACAATCTCATTAATT+GGG | + | chr3_1:93108005-93108024 | None:intergenic | 25.0% |
| !!! | GGATTATTTTTTGCTGTTTA+TGG | - | chr3_1:93108288-93108307 | Msa0388650:five_prime_UTR | 25.0% |
| ! | AGTTGTATAAAAGCTTAAAC+AGG | + | chr3_1:93108369-93108388 | None:intergenic | 25.0% |
| !!! | AAGCACGTGTTTTTTGATTT+GGG | + | chr3_1:93105656-93105675 | None:intergenic | 30.0% |
| CTATAACATGTGTTTGATCA+TGG | - | chr3_1:93105682-93105701 | Msa0388650:CDS | 30.0% | |
| !! | TCTTTTGGAAGATAACAAAG+GGG | + | chr3_1:93105810-93105829 | None:intergenic | 30.0% |
| !! | CTCTTTTGGAAGATAACAAA+GGG | + | chr3_1:93105811-93105830 | None:intergenic | 30.0% |
| ATGAGCATAGAATTTGATTC+AGG | - | chr3_1:93106084-93106103 | Msa0388650:intron | 30.0% | |
| ATTCAGGTAGGTTTCAATAT+TGG | - | chr3_1:93106100-93106119 | Msa0388650:intron | 30.0% | |
| AAATGCATCACGCATAATAA+TGG | + | chr3_1:93106372-93106391 | None:intergenic | 30.0% | |
| TTCATTATATGCAGGGAATT+CGG | - | chr3_1:93106494-93106513 | Msa0388650:intron | 30.0% | |
| TGATTTCATTGATACAGGTT+TGG | - | chr3_1:93106545-93106564 | Msa0388650:intron | 30.0% | |
| TAAGATCTTGATTCCACTAA+CGG | + | chr3_1:93106598-93106617 | None:intergenic | 30.0% | |
| TTAGTGGAATCAAGATCTTA+TGG | - | chr3_1:93106598-93106617 | Msa0388650:intron | 30.0% | |
| !! | TATAGATGCTTTGGAACATT+CGG | - | chr3_1:93106631-93106650 | Msa0388650:intron | 30.0% |
| TTATAAATTCTGTCAGATGC+CGG | + | chr3_1:93106657-93106676 | None:intergenic | 30.0% | |
| TCTGACAGAATTTATAATCG+TGG | - | chr3_1:93106660-93106679 | Msa0388650:intron | 30.0% | |
| GTTGCGTATTTGGTATTTAT+TGG | - | chr3_1:93106703-93106722 | Msa0388650:intron | 30.0% | |
| TACTAGCATAAATATGTAGG+AGG | + | chr3_1:93106773-93106792 | None:intergenic | 30.0% | |
| TGGTACTAGCATAAATATGT+AGG | + | chr3_1:93106776-93106795 | None:intergenic | 30.0% | |
| ACATCAGCAAAAATGCTAAA+TGG | + | chr3_1:93106844-93106863 | None:intergenic | 30.0% | |
| !!! | ATGGCTGTTTTTTGTTTTGA+GGG | - | chr3_1:93106991-93107010 | Msa0388650:CDS | 30.0% |
| ATCCTTCATAGAATTCTCTA+GGG | + | chr3_1:93107034-93107053 | None:intergenic | 30.0% | |
| TATCCTTCATAGAATTCTCT+AGG | + | chr3_1:93107035-93107054 | None:intergenic | 30.0% | |
| ! | ACACTCGTATACATTCTTTT+TGG | - | chr3_1:93107099-93107118 | Msa0388650:CDS | 30.0% |
| ! | CACTCGTATACATTCTTTTT+GGG | - | chr3_1:93107100-93107119 | Msa0388650:CDS | 30.0% |
| !!! | TACATTCTTTTTGGGTTATG+TGG | - | chr3_1:93107108-93107127 | Msa0388650:CDS | 30.0% |
| TATGAATGTCTTTACCTGTA+CGG | + | chr3_1:93107205-93107224 | None:intergenic | 30.0% | |
| AGCAGTATACTCAAATAACA+TGG | + | chr3_1:93107373-93107392 | None:intergenic | 30.0% | |
| ! | ATGTTATTTGAGTATACTGC+TGG | - | chr3_1:93107372-93107391 | Msa0388650:CDS | 30.0% |
| ! | GTTTGGTTGCTTTAACTATA+TGG | - | chr3_1:93107422-93107441 | Msa0388650:intron | 30.0% |
| ! | AACTATATGGTCTTCACTTT+TGG | - | chr3_1:93107435-93107454 | Msa0388650:intron | 30.0% |
| !! | ACTATATGGTCTTCACTTTT+GGG | - | chr3_1:93107436-93107455 | Msa0388650:intron | 30.0% |
| TGTAAAACAGATTAACTGAC+AGG | + | chr3_1:93107482-93107501 | None:intergenic | 30.0% | |
| !! | GCATTTTATATGATGATGAC+AGG | - | chr3_1:93107933-93107952 | Msa0388650:intron | 30.0% |
| ! | TTTATATGATGATGACAGGT+AGG | - | chr3_1:93107937-93107956 | Msa0388650:intron | 30.0% |
| TAATTGGGTGTAACATGATT+GGG | + | chr3_1:93107990-93108009 | None:intergenic | 30.0% | |
| TTAATTGGGTGTAACATGAT+TGG | + | chr3_1:93107991-93108010 | None:intergenic | 30.0% | |
| CCTTCTACAATCTCATTAAT+TGG | + | chr3_1:93108006-93108025 | None:intergenic | 30.0% | |
| CCAATTAATGAGATTGTAGA+AGG | - | chr3_1:93108003-93108022 | Msa0388650:intron | 30.0% | |
| ! | GAGAAGAGCCAAATAATTTT+AGG | + | chr3_1:93108224-93108243 | None:intergenic | 30.0% |
| ! | GAATGGATTCGTTGCTAAAA+AGG | + | chr3_1:93105621-93105640 | None:intergenic | 35.0% |
| !!! | AGCACGTGTTTTTTGATTTG+GGG | + | chr3_1:93105655-93105674 | None:intergenic | 35.0% |
| !!! | GAAGCACGTGTTTTTTGATT+TGG | + | chr3_1:93105657-93105676 | None:intergenic | 35.0% |
| TTAGATACTAACACGCAACT+GGG | + | chr3_1:93105761-93105780 | None:intergenic | 35.0% | |
| ATTAGATACTAACACGCAAC+TGG | + | chr3_1:93105762-93105781 | None:intergenic | 35.0% | |
| !! | GCTCTTTTGGAAGATAACAA+AGG | + | chr3_1:93105812-93105831 | None:intergenic | 35.0% |
| !!! | TTGAAGCTTTGAAGCTCTTT+TGG | + | chr3_1:93105825-93105844 | None:intergenic | 35.0% |
| AGCTTCAAAGCTTCAAACTT+TGG | - | chr3_1:93105829-93105848 | Msa0388650:CDS | 35.0% | |
| GCTTCAAAGCTTCAAACTTT+GGG | - | chr3_1:93105830-93105849 | Msa0388650:CDS | 35.0% | |
| CTTCAAAGCTTCAAACTTTG+GGG | - | chr3_1:93105831-93105850 | Msa0388650:CDS | 35.0% | |
| ATTGTTACTGTAGTTGGAAC+TGG | - | chr3_1:93105860-93105879 | Msa0388650:CDS | 35.0% | |
| ! | AAGTAGGAGCATGCAATAAT+AGG | + | chr3_1:93105966-93105985 | None:intergenic | 35.0% |
| GCATAGAATTTGATTCAGGT+AGG | - | chr3_1:93106088-93106107 | Msa0388650:intron | 35.0% | |
| CGTGATGCATTTATTGATCT+TGG | - | chr3_1:93106380-93106399 | Msa0388650:intron | 35.0% | |
| TCCGAGTTTCATTATATGCA+GGG | - | chr3_1:93106487-93106506 | Msa0388650:intron | 35.0% | |
| TCCCTGCATATAATGAAACT+CGG | + | chr3_1:93106491-93106510 | None:intergenic | 35.0% | |
| ATGCTAGTACCAGTTGAAAT+TGG | - | chr3_1:93106784-93106803 | Msa0388650:intron | 35.0% | |
| TGCTAGTACCAGTTGAAATT+GGG | - | chr3_1:93106785-93106804 | Msa0388650:intron | 35.0% | |
| ! | ATGGGTTTTCGTTTAGAGAA+AGG | - | chr3_1:93106923-93106942 | Msa0388650:CDS | 35.0% |
| ! | GTTTTCGTTTAGAGAAAGGA+CGG | - | chr3_1:93106927-93106946 | Msa0388650:CDS | 35.0% |
| !!! | CATGGCTGTTTTTTGTTTTG+AGG | - | chr3_1:93106990-93107009 | Msa0388650:CDS | 35.0% |
| !!! | TGGCTGTTTTTTGTTTTGAG+GGG | - | chr3_1:93106992-93107011 | Msa0388650:CDS | 35.0% |
| !!! | GTTTTTTGTTTTGAGGGGTT+TGG | - | chr3_1:93106997-93107016 | Msa0388650:CDS | 35.0% |
| AGCTAAATTCCCAAAATTGC+TGG | - | chr3_1:93107056-93107075 | Msa0388650:CDS | 35.0% | |
| !!! | TTTTGGGTTATGTGGTTACA+TGG | - | chr3_1:93107116-93107135 | Msa0388650:CDS | 35.0% |
| ! | TTATGTGGTTACATGGCTTT+TGG | - | chr3_1:93107123-93107142 | Msa0388650:CDS | 35.0% |
| ATTAAGAGTCACAATGTCTC+TGG | + | chr3_1:93107157-93107176 | None:intergenic | 35.0% | |
| !! | TTTGGGTTGTATGTGTCAAT+TGG | - | chr3_1:93107453-93107472 | Msa0388650:intron | 35.0% |
| GTAGCACATATTATGTGCAT+TGG | - | chr3_1:93107670-93107689 | Msa0388650:intron | 35.0% | |
| ATATTATGAACTCCTGGCAA+TGG | + | chr3_1:93107855-93107874 | None:intergenic | 35.0% | |
| GAAGTCAAACATTGACCAAT+AGG | + | chr3_1:93107911-93107930 | None:intergenic | 35.0% | |
| !! | AAAAGAAAGCATTGCACACA+AGG | + | chr3_1:93108181-93108200 | None:intergenic | 35.0% |
| !! | AATTTTAGGTGAAATGTGGC+TGG | + | chr3_1:93108210-93108229 | None:intergenic | 35.0% |
| GGAACTTACAACACAATTGT+TGG | - | chr3_1:93108309-93108328 | Msa0388650:five_prime_UTR | 35.0% | |
| !!! | TGTTTTTTGATTTGGGGAGG+TGG | + | chr3_1:93105649-93105668 | None:intergenic | 40.0% |
| !!! | ACGTGTTTTTTGATTTGGGG+AGG | + | chr3_1:93105652-93105671 | None:intergenic | 40.0% |
| TAGATACTAACACGCAACTG+GGG | + | chr3_1:93105760-93105779 | None:intergenic | 40.0% | |
| ! | TGTAGTTGGAACTGGTGTTT+TGG | - | chr3_1:93105868-93105887 | Msa0388650:CDS | 40.0% |
| ! | GTAGTTGGAACTGGTGTTTT+GGG | - | chr3_1:93105869-93105888 | Msa0388650:CDS | 40.0% |
| !! | TGGGTTTACCCTTTGCTTTT+CGG | - | chr3_1:93105888-93105907 | Msa0388650:CDS | 40.0% |
| TTATTGCATGCTCCTACTTG+TGG | - | chr3_1:93105967-93105986 | Msa0388650:CDS | 40.0% | |
| TATTGCATGCTCCTACTTGT+GGG | - | chr3_1:93105968-93105987 | Msa0388650:CDS | 40.0% | |
| TAGAAAGATGACCCACAAGT+AGG | + | chr3_1:93105982-93106001 | None:intergenic | 40.0% | |
| ! | TGTTGTGTACTTCACTGACT+TGG | - | chr3_1:93106265-93106284 | Msa0388650:intron | 40.0% |
| CTCCGAGTTTCATTATATGC+AGG | - | chr3_1:93106486-93106505 | Msa0388650:intron | 40.0% | |
| ATCAAGATCTTATGGAGACC+TGG | - | chr3_1:93106606-93106625 | Msa0388650:intron | 40.0% | |
| TCAAGATCTTATGGAGACCT+GGG | - | chr3_1:93106607-93106626 | Msa0388650:intron | 40.0% | |
| ! | TTCCAAAGCATCTATAACCC+AGG | + | chr3_1:93106627-93106646 | None:intergenic | 40.0% |
| ! | CAAGCGATGGTCCATATTTT+TGG | + | chr3_1:93106750-93106769 | None:intergenic | 40.0% |
| CATGACATCCCAATTTCAAC+TGG | + | chr3_1:93106796-93106815 | None:intergenic | 40.0% | |
| CAGTTGAAATTGGGATGTCA+TGG | - | chr3_1:93106794-93106813 | Msa0388650:CDS | 40.0% | |
| GAAATTGGGATGTCATGGAT+AGG | - | chr3_1:93106799-93106818 | Msa0388650:CDS | 40.0% | |
| TCACTACAATTCCCATAGCT+AGG | + | chr3_1:93106876-93106895 | None:intergenic | 40.0% | |
| AGCTATGGGAATTGTAGTGA+AGG | - | chr3_1:93106876-93106895 | Msa0388650:CDS | 40.0% | |
| AAACGAAAACCCATCCTCTA+AGG | + | chr3_1:93106917-93106936 | None:intergenic | 40.0% | |
| TGCCCTAGAGAATTCTATGA+AGG | - | chr3_1:93107029-93107048 | Msa0388650:CDS | 40.0% | |
| ! | AAGTCTGAGCCAGCAATTTT+GGG | + | chr3_1:93107068-93107087 | None:intergenic | 40.0% |
| ! | AAAGTCTGAGCCAGCAATTT+TGG | + | chr3_1:93107069-93107088 | None:intergenic | 40.0% |
| TTGTGACTCTTAATCTCCCT+AGG | - | chr3_1:93107163-93107182 | Msa0388650:CDS | 40.0% | |
| ! | TGAACAAAGAGCATGAGAAG+AGG | + | chr3_1:93107348-93107367 | None:intergenic | 40.0% |
| !! | TTGAAGGTGATGATGGTGTT+TGG | - | chr3_1:93107405-93107424 | Msa0388650:CDS | 40.0% |
| TTGTCTATGTGGTCACATGT+TGG | - | chr3_1:93107538-93107557 | Msa0388650:intron | 40.0% | |
| TAGTTGTGTATGTCCTGCTT+TGG | - | chr3_1:93107647-93107666 | Msa0388650:intron | 40.0% | |
| AGTTGTGTATGTCCTGCTTT+GGG | - | chr3_1:93107648-93107667 | Msa0388650:intron | 40.0% | |
| TAATATGTGCTACCCAAAGC+AGG | + | chr3_1:93107663-93107682 | None:intergenic | 40.0% | |
| GGCAAACCAATTATGTGCAT+TGG | - | chr3_1:93107735-93107754 | Msa0388650:intron | 40.0% | |
| ! | ATACATCAGTCGTGCTATTG+TGG | - | chr3_1:93108086-93108105 | Msa0388650:CDS | 40.0% |
| GCTTCATTTGTGCCAGAATT+TGG | - | chr3_1:93108129-93108148 | Msa0388650:CDS | 40.0% | |
| GAGGCAAATACACCAAATTC+TGG | + | chr3_1:93108144-93108163 | None:intergenic | 40.0% | |
| TGGTGTATTTGCCTCATTTG+TGG | - | chr3_1:93108149-93108168 | Msa0388650:CDS | 40.0% | |
| GGTGTATTTGCCTCATTTGT+GGG | - | chr3_1:93108150-93108169 | Msa0388650:CDS | 40.0% | |
| GTGTATTTGCCTCATTTGTG+GGG | - | chr3_1:93108151-93108170 | Msa0388650:CDS | 40.0% | |
| TTGGGGAGGTGGAAAATGAA+TGG | + | chr3_1:93105638-93105657 | None:intergenic | 45.0% | |
| CCAGCAATCCGAAAAGCAAA+GGG | + | chr3_1:93105899-93105918 | None:intergenic | 45.0% | |
| ACCAGCAATCCGAAAAGCAA+AGG | + | chr3_1:93105900-93105919 | None:intergenic | 45.0% | |
| !! | TTGCTTTTCGGATTGCTGGT+TGG | - | chr3_1:93105900-93105919 | Msa0388650:CDS | 45.0% |
| !! | TGCTTTTCGGATTGCTGGTT+GGG | - | chr3_1:93105901-93105920 | Msa0388650:CDS | 45.0% |
| GGCTATAGCTCAGATAGCTT+TGG | - | chr3_1:93106121-93106140 | Msa0388650:intron | 45.0% | |
| GCATCACGCATAATAATGGC+AGG | + | chr3_1:93106368-93106387 | None:intergenic | 45.0% | |
| !! | CTCAGCCATCGATTTCAGAT+CGG | + | chr3_1:93106448-93106467 | None:intergenic | 45.0% |
| ! | CGGTTCTTGAGTTGTCATTG+CGG | - | chr3_1:93106514-93106533 | Msa0388650:intron | 45.0% |
| !! | GGTTTGGTGCAGAGATAAGT+TGG | - | chr3_1:93106561-93106580 | Msa0388650:intron | 45.0% |
| GACCTGGGTTATAGATGCTT+TGG | - | chr3_1:93106622-93106641 | Msa0388650:intron | 45.0% | |
| TGCAGGATCTGTTGCGTATT+TGG | - | chr3_1:93106693-93106712 | Msa0388650:intron | 45.0% | |
| AATATGTAGGAGGCAAGCGA+TGG | + | chr3_1:93106763-93106782 | None:intergenic | 45.0% | |
| TGTGTGCAATGTCCTAGCTA+TGG | - | chr3_1:93106861-93106880 | Msa0388650:CDS | 45.0% | |
| GTGTGCAATGTCCTAGCTAT+GGG | - | chr3_1:93106862-93106881 | Msa0388650:CDS | 45.0% | |
| AGTGAAGGAAGATGTACGAG+TGG | - | chr3_1:93106891-93106910 | Msa0388650:CDS | 45.0% | |
| !!! | TTGCTGGCTCAGACTTTTAG+TGG | - | chr3_1:93107072-93107091 | Msa0388650:CDS | 45.0% |
| CATCATCACCTTCAAGCACT+AGG | + | chr3_1:93107400-93107419 | None:intergenic | 45.0% | |
| CTAGTGCTTGAAGGTGATGA+TGG | - | chr3_1:93107398-93107417 | Msa0388650:CDS | 45.0% | |
| ACGCTTCGTGGACAGAATTT+AGG | + | chr3_1:93107514-93107533 | None:intergenic | 45.0% | |
| ATAGACAAACACACGCTTCG+TGG | + | chr3_1:93107526-93107545 | None:intergenic | 45.0% | |
| GAAGCGTGTGTTTGTCTATG+TGG | - | chr3_1:93107527-93107546 | Msa0388650:intron | 45.0% | |
| GAACGTGCTTGTAAGCATGT+TGG | + | chr3_1:93107591-93107610 | None:intergenic | 45.0% | |
| ! | TGGTTTGCCGTAGACATCTA+AGG | + | chr3_1:93107724-93107743 | None:intergenic | 45.0% |
| ATGAGAAAGCTTCCATTGCC+AGG | - | chr3_1:93107840-93107859 | Msa0388650:intron | 45.0% | |
| TTCTCTATGCCTCTGGCAAA+AGG | - | chr3_1:93108239-93108258 | Msa0388650:five_prime_UTR | 45.0% | |
| ! | AATCAAGGACCTTTTGCCAG+AGG | + | chr3_1:93108251-93108270 | None:intergenic | 45.0% |
| !! | CCCTTTGCTTTTCGGATTGC+TGG | - | chr3_1:93105896-93105915 | Msa0388650:CDS | 50.0% |
| !! | TCGCTTGGTGTTGCTATCGT+TGG | - | chr3_1:93105932-93105951 | Msa0388650:CDS | 50.0% |
| ! | GTCGACCGATCTGAAATCGA+TGG | - | chr3_1:93106440-93106459 | Msa0388650:intron | 50.0% |
| !! | GATGCTTTGGAACATTCGGC+CGG | - | chr3_1:93106635-93106654 | Msa0388650:intron | 50.0% |
| ATCGTGGTAGCACAATGTGC+AGG | - | chr3_1:93106676-93106695 | Msa0388650:intron | 50.0% | |
| ! | AGATGTACGAGTGGCCTTAG+AGG | - | chr3_1:93106900-93106919 | Msa0388650:CDS | 50.0% |
| ! | TACGAGTGGCCTTAGAGGAT+GGG | - | chr3_1:93106905-93106924 | Msa0388650:CDS | 50.0% |
| ACGGCAATCACGTCGAACAT+TGG | - | chr3_1:93106946-93106965 | Msa0388650:CDS | 50.0% | |
| CGGCAATCACGTCGAACATT+GGG | - | chr3_1:93106947-93106966 | Msa0388650:CDS | 50.0% | |
| GGCAATCACGTCGAACATTG+GGG | - | chr3_1:93106948-93106967 | Msa0388650:CDS | 50.0% | |
| GCAATCACGTCGAACATTGG+GGG | - | chr3_1:93106949-93106968 | Msa0388650:CDS | 50.0% | |
| CAATCACGTCGAACATTGGG+GGG | - | chr3_1:93106950-93106969 | Msa0388650:CDS | 50.0% | |
| CTCTTAATCTCCCTAGGAGC+TGG | - | chr3_1:93107169-93107188 | Msa0388650:CDS | 50.0% | |
| CAAGAGATGACCAGCTCCTA+GGG | + | chr3_1:93107182-93107201 | None:intergenic | 50.0% | |
| TGCTGGTACCTAGTGCTTGA+AGG | - | chr3_1:93107389-93107408 | Msa0388650:CDS | 50.0% | |
| ATGACAGGTAGGATTGTGCC+TGG | - | chr3_1:93107948-93107967 | Msa0388650:intron | 50.0% | |
| TGACAGGTAGGATTGTGCCT+GGG | - | chr3_1:93107949-93107968 | Msa0388650:intron | 50.0% | |
| GGAATGTGAACATAAGCCCC+AGG | + | chr3_1:93107969-93107988 | None:intergenic | 50.0% | |
| ! | CATCAGTCGTGCTATTGTGG+TGG | - | chr3_1:93108089-93108108 | Msa0388650:CDS | 50.0% |
| TGCTATTGTGGTGGTTGTGC+TGG | - | chr3_1:93108098-93108117 | Msa0388650:CDS | 50.0% | |
| ! | CAAGGTACTCCCCACAAATG+AGG | + | chr3_1:93108163-93108182 | None:intergenic | 50.0% |
| ! | TTGGCTCTTCTCTATGCCTC+TGG | - | chr3_1:93108232-93108251 | Msa0388650:five_prime_UTR | 50.0% |
| GGCATCAGAAGAGCCGTTAG+TGG | - | chr3_1:93106582-93106601 | Msa0388650:intron | 55.0% | |
| ! | GTACGAGTGGCCTTAGAGGA+TGG | - | chr3_1:93106904-93106923 | Msa0388650:CDS | 55.0% |
| ! | GTTGCCATTTGCAGCAGGCA+TGG | - | chr3_1:93106972-93106991 | Msa0388650:CDS | 55.0% |
| ACAGCCATGCCTGCTGCAAA+TGG | + | chr3_1:93106979-93106998 | None:intergenic | 55.0% | |
| GCAAGAGATGACCAGCTCCT+AGG | + | chr3_1:93107183-93107202 | None:intergenic | 55.0% | |
| CTGGTCATCTCTTGCCGTAC+AGG | - | chr3_1:93107188-93107207 | Msa0388650:CDS | 55.0% | |
| TTGGACACGAAGCCTTGCAG+TGG | - | chr3_1:93107557-93107576 | Msa0388650:intron | 55.0% | |
| TTGGACTCAACGCCACTGCA+AGG | + | chr3_1:93107572-93107591 | None:intergenic | 55.0% | |
| GACAGGTAGGATTGTGCCTG+GGG | - | chr3_1:93107950-93107969 | Msa0388650:intron | 55.0% | |
| ! | CGGATTGCTGGTTGGGTTGC+TGG | - | chr3_1:93105908-93105927 | Msa0388650:CDS | 60.0% |
| !! | GGTTGGGTTGCTGGCTCGCT+TGG | - | chr3_1:93105917-93105936 | Msa0388650:CDS | 65.0% |
| ! | GGGGGGTTGCCATTTGCAGC+AGG | - | chr3_1:93106967-93106986 | Msa0388650:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 93105550 | 93108450 | 93105550 | ID=Msa0388650;Name=Msa0388650 |
| chr3_1 | mRNA | 93105550 | 93108450 | 93105550 | ID=Msa0388650-mRNA-1;Parent=Msa0388650;Name=Msa0388650-mRNA-1;_AED=0.08;_eAED=0.08;_QI=244|1|1|1|1|1|3|112|407 |
| chr3_1 | exon | 93105550 | 93106045 | 93105550 | ID=Msa0388650-mRNA-1:exon:26284;Parent=Msa0388650-mRNA-1 |
| chr3_1 | exon | 93106791 | 93107438 | 93106791 | ID=Msa0388650-mRNA-1:exon:26283;Parent=Msa0388650-mRNA-1 |
| chr3_1 | exon | 93108015 | 93108450 | 93108015 | ID=Msa0388650-mRNA-1:exon:26282;Parent=Msa0388650-mRNA-1 |
| chr3_1 | five_prime_UTR | 93108207 | 93108450 | 93108207 | ID=Msa0388650-mRNA-1:five_prime_utr;Parent=Msa0388650-mRNA-1 |
| chr3_1 | CDS | 93108015 | 93108206 | 93108015 | ID=Msa0388650-mRNA-1:cds;Parent=Msa0388650-mRNA-1 |
| chr3_1 | CDS | 93106791 | 93107438 | 93106791 | ID=Msa0388650-mRNA-1:cds;Parent=Msa0388650-mRNA-1 |
| chr3_1 | CDS | 93105662 | 93106045 | 93105662 | ID=Msa0388650-mRNA-1:cds;Parent=Msa0388650-mRNA-1 |
| chr3_1 | three_prime_UTR | 93105550 | 93105661 | 93105550 | ID=Msa0388650-mRNA-1:three_prime_utr;Parent=Msa0388650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
