Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0808930 | XP_003614763.1 | 94.889 | 450 | 10 | 3 | 1 | 445 | 1 | 442 | 0.0 | 868 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0808930 | sp|Q56YP2|PI5K1_ARATH | 37.968 | 187 | 115 | 1 | 194 | 379 | 69 | 255 | 1.78e-28 | 122 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0808930 | G7K8V2 | 94.889 | 450 | 10 | 3 | 1 | 445 | 1 | 442 | 0.0 | 868 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0036920 | Msa0808930 | 0.801341 | 9.426226e-49 | -8.615850e-47 |
Msa0688070 | Msa0808930 | 0.815471 | 9.091122e-52 | -8.615850e-47 |
Msa0751210 | Msa0808930 | 0.800593 | 1.340288e-48 | -8.615850e-47 |
Msa0808930 | Msa0981310 | 0.802345 | 5.864202e-49 | -8.615850e-47 |
Msa0808930 | Msa1174310 | 0.811374 | 7.229828e-51 | -8.615850e-47 |
Msa0808930 | Msa1224480 | 0.816842 | 4.488819e-52 | -8.615850e-47 |
Msa0808930 | Msa1230830 | 0.802855 | 4.602654e-49 | -8.615850e-47 |
Msa0808930 | Msa1235400 | 0.808129 | 3.603778e-50 | -8.615850e-47 |
Msa0808930 | Msa1314770 | 0.808524 | 2.969640e-50 | -8.615850e-47 |
Msa0808930 | Msa1333730 | 0.800642 | 1.309730e-48 | -8.615850e-47 |
Msa0808930 | Msa1372290 | 0.806401 | 8.373648e-50 | -8.615850e-47 |
Msa0808930 | Msa1451620 | -0.807109 | 5.934403e-50 | -8.615850e-47 |
Msa0130970 | Msa0808930 | 0.803017 | 4.260251e-49 | -8.615850e-47 |
Msa0219240 | Msa0808930 | 0.845116 | 4.963859e-59 | -8.615850e-47 |
Msa0231240 | Msa0808930 | 0.800386 | 1.476683e-48 | -8.615850e-47 |
Msa0373450 | Msa0808930 | 0.813488 | 2.495248e-51 | -8.615850e-47 |
Msa0390960 | Msa0808930 | 0.802075 | 6.663038e-49 | -8.615850e-47 |
Msa0444750 | Msa0808930 | -0.805847 | 1.095368e-49 | -8.615850e-47 |
Msa0271580 | Msa0808930 | 0.809877 | 1.522676e-50 | -8.615850e-47 |
Msa0271790 | Msa0808930 | 0.801022 | 1.095279e-48 | -8.615850e-47 |
Msa0310430 | Msa0808930 | 0.806231 | 9.093765e-50 | -8.615850e-47 |
Msa0323370 | Msa0808930 | 0.801603 | 8.330223e-49 | -8.615850e-47 |
Msa0532810 | Msa0808930 | -0.817340 | 3.469990e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0808930 | MtrunA17_Chr5g0424111 | 94.889 | 450 | 10 | 3 | 1 | 445 | 1 | 442 | 0.0 | 868 |
Msa0808930 | MtrunA17_Chr3g0114791 | 64.889 | 450 | 133 | 10 | 1 | 445 | 1 | 430 | 2.32e-175 | 498 |
Msa0808930 | MtrunA17_Chr7g0233351 | 61.265 | 253 | 80 | 3 | 169 | 410 | 168 | 413 | 4.20e-102 | 311 |
Msa0808930 | MtrunA17_Chr4g0055371 | 48.378 | 339 | 136 | 6 | 82 | 420 | 83 | 382 | 1.83e-97 | 299 |
Msa0808930 | MtrunA17_Chr8g0336161 | 60.938 | 256 | 85 | 2 | 194 | 436 | 191 | 444 | 3.66e-91 | 283 |
Msa0808930 | MtrunA17_Chr8g0377671 | 40.884 | 181 | 107 | 0 | 194 | 374 | 14 | 194 | 1.88e-35 | 132 |
Msa0808930 | MtrunA17_Chr8g0377671 | 36.813 | 182 | 108 | 1 | 176 | 357 | 95 | 269 | 4.27e-29 | 115 |
Msa0808930 | MtrunA17_Chr8g0377191 | 40.909 | 176 | 104 | 0 | 199 | 374 | 11 | 186 | 2.90e-32 | 121 |
Msa0808930 | MtrunA17_Chr8g0377191 | 34.194 | 155 | 102 | 0 | 193 | 347 | 51 | 205 | 6.24e-20 | 87.8 |
Msa0808930 | MtrunA17_Chr8g0377191 | 35.115 | 131 | 85 | 0 | 243 | 373 | 9 | 139 | 8.65e-15 | 73.2 |
Msa0808930 | MtrunA17_Chr8g0377191 | 36.090 | 133 | 62 | 1 | 190 | 299 | 71 | 203 | 1.04e-12 | 67.0 |
Msa0808930 | MtrunA17_Chr8g0382971 | 39.412 | 170 | 103 | 0 | 199 | 368 | 70 | 239 | 7.54e-30 | 119 |
Msa0808930 | MtrunA17_Chr8g0382971 | 34.135 | 208 | 114 | 2 | 189 | 373 | 14 | 221 | 4.50e-24 | 102 |
Msa0808930 | MtrunA17_Chr8g0382971 | 33.503 | 197 | 123 | 3 | 192 | 386 | 109 | 299 | 4.87e-22 | 97.1 |
Msa0808930 | MtrunA17_Chr8g0382971 | 32.031 | 128 | 87 | 0 | 248 | 375 | 27 | 154 | 3.14e-11 | 64.7 |
Msa0808930 | MtrunA17_Chr8g0380791 | 36.313 | 179 | 114 | 0 | 195 | 373 | 8 | 186 | 6.98e-29 | 120 |
Msa0808930 | MtrunA17_Chr8g0380791 | 36.090 | 133 | 85 | 0 | 243 | 375 | 10 | 142 | 2.92e-17 | 84.7 |
Msa0808930 | MtrunA17_Chr8g0380791 | 41.667 | 96 | 56 | 0 | 193 | 288 | 98 | 193 | 3.25e-13 | 72.0 |
Msa0808930 | MtrunA17_Chr8g0380791 | 37.719 | 114 | 71 | 0 | 200 | 313 | 82 | 195 | 1.19e-12 | 70.1 |
Msa0808930 | MtrunA17_Chr5g0424301 | 38.650 | 163 | 100 | 0 | 201 | 363 | 70 | 232 | 4.00e-26 | 111 |
Msa0808930 | MtrunA17_Chr5g0424301 | 39.683 | 126 | 76 | 0 | 248 | 373 | 71 | 196 | 1.27e-19 | 91.7 |
Msa0808930 | MtrunA17_Chr4g0059911 | 38.182 | 165 | 102 | 0 | 205 | 369 | 61 | 225 | 1.08e-25 | 107 |
Msa0808930 | MtrunA17_Chr4g0059911 | 35.238 | 210 | 112 | 2 | 193 | 378 | 2 | 211 | 7.82e-25 | 105 |
Msa0808930 | MtrunA17_Chr4g0059911 | 31.720 | 186 | 124 | 1 | 185 | 367 | 87 | 272 | 4.13e-21 | 94.7 |
Msa0808930 | MtrunA17_Chr3g0115111 | 38.333 | 180 | 110 | 1 | 201 | 379 | 58 | 237 | 2.80e-25 | 108 |
Msa0808930 | MtrunA17_Chr8g0383331 | 37.838 | 148 | 92 | 0 | 199 | 346 | 3 | 150 | 5.04e-25 | 100 |
Msa0808930 | MtrunA17_Chr8g0383331 | 41.270 | 126 | 74 | 0 | 244 | 369 | 2 | 127 | 1.32e-23 | 97.1 |
Msa0808930 | MtrunA17_Chr8g0383331 | 36.066 | 122 | 78 | 0 | 178 | 299 | 28 | 149 | 3.78e-14 | 70.1 |
Msa0808930 | MtrunA17_Chr8g0385241 | 34.579 | 214 | 106 | 3 | 191 | 370 | 47 | 260 | 7.50e-25 | 106 |
Msa0808930 | MtrunA17_Chr8g0385241 | 34.286 | 175 | 112 | 2 | 191 | 362 | 172 | 346 | 1.71e-20 | 93.2 |
Msa0808930 | MtrunA17_Chr8g0385241 | 32.796 | 186 | 115 | 1 | 198 | 373 | 8 | 193 | 3.79e-19 | 89.4 |
Msa0808930 | MtrunA17_Chr8g0385241 | 30.041 | 243 | 132 | 4 | 199 | 407 | 124 | 362 | 8.13e-19 | 88.2 |
Msa0808930 | MtrunA17_Chr8g0385241 | 28.571 | 196 | 130 | 1 | 185 | 370 | 18 | 213 | 5.37e-16 | 79.7 |
Msa0808930 | MtrunA17_Chr8g0385241 | 37.600 | 125 | 78 | 0 | 251 | 375 | 15 | 139 | 9.41e-15 | 75.9 |
Msa0808930 | MtrunA17_Chr8g0385241 | 34.109 | 129 | 83 | 1 | 190 | 316 | 218 | 346 | 3.37e-12 | 68.2 |
Msa0808930 | MtrunA17_Chr8g0353121 | 30.303 | 231 | 153 | 2 | 140 | 370 | 1 | 223 | 1.34e-24 | 107 |
Msa0808930 | MtrunA17_Chr8g0353121 | 31.081 | 148 | 102 | 0 | 199 | 346 | 98 | 245 | 2.93e-12 | 68.9 |
Msa0808930 | MtrunA17_Chr7g0256301 | 32.065 | 184 | 125 | 0 | 180 | 363 | 51 | 234 | 3.09e-24 | 105 |
Msa0808930 | MtrunA17_Chr1g0171491 | 33.508 | 191 | 123 | 1 | 180 | 370 | 45 | 231 | 2.27e-23 | 103 |
Msa0808930 | MtrunA17_Chr1g0171491 | 39.062 | 128 | 78 | 0 | 248 | 375 | 63 | 190 | 7.63e-20 | 92.4 |
Msa0808930 | MtrunA17_Chr1g0171491 | 31.977 | 172 | 117 | 0 | 198 | 369 | 82 | 253 | 3.08e-18 | 87.4 |
Msa0808930 | MtrunA17_Chr3g0131001 | 37.500 | 176 | 110 | 0 | 201 | 376 | 56 | 231 | 6.27e-23 | 102 |
Msa0808930 | MtrunA17_Chr3g0131001 | 33.077 | 130 | 87 | 0 | 199 | 328 | 100 | 229 | 2.10e-12 | 69.3 |
Msa0808930 | MtrunA17_Chr3g0082501 | 34.503 | 171 | 112 | 0 | 200 | 370 | 64 | 234 | 1.09e-22 | 101 |
Msa0808930 | MtrunA17_Chr3g0082501 | 37.302 | 126 | 79 | 0 | 248 | 373 | 66 | 191 | 5.48e-16 | 80.5 |
Msa0808930 | MtrunA17_Chr3g0082501 | 32.609 | 138 | 93 | 0 | 199 | 336 | 109 | 246 | 1.45e-12 | 69.7 |
Msa0808930 | MtrunA17_Chr3g0082501 | 40.449 | 89 | 53 | 0 | 190 | 278 | 146 | 234 | 2.22e-12 | 69.3 |
Msa0808930 | MtrunA17_Chr8g0385201 | 32.821 | 195 | 124 | 2 | 176 | 369 | 6 | 194 | 7.78e-22 | 98.6 |
Msa0808930 | MtrunA17_Chr8g0385201 | 37.391 | 115 | 72 | 0 | 261 | 375 | 46 | 160 | 1.87e-16 | 82.0 |
Msa0808930 | MtrunA17_Chr8g0377211 | 36.478 | 159 | 77 | 2 | 199 | 357 | 19 | 153 | 3.05e-20 | 87.8 |
Msa0808930 | MtrunA17_Chr8g0377211 | 37.705 | 122 | 76 | 0 | 190 | 311 | 32 | 153 | 2.65e-19 | 85.1 |
Msa0808930 | MtrunA17_Chr8g0377211 | 32.800 | 125 | 84 | 0 | 251 | 375 | 24 | 148 | 3.86e-16 | 75.9 |
Msa0808930 | MtrunA17_Chr1g0180261 | 31.953 | 169 | 115 | 0 | 190 | 358 | 64 | 232 | 3.66e-20 | 93.6 |
Msa0808930 | MtrunA17_Chr1g0180261 | 33.161 | 193 | 126 | 2 | 201 | 391 | 52 | 243 | 5.58e-20 | 92.8 |
Msa0808930 | MtrunA17_Chr1g0180261 | 33.333 | 138 | 69 | 2 | 199 | 313 | 96 | 233 | 2.26e-15 | 78.6 |
Msa0808930 | MtrunA17_Chr1g0180261 | 34.091 | 132 | 87 | 0 | 244 | 375 | 49 | 180 | 2.18e-13 | 72.4 |
Msa0808930 | MtrunA17_Chr2g0316611 | 35.673 | 171 | 110 | 0 | 199 | 369 | 127 | 297 | 4.38e-20 | 91.7 |
Msa0808930 | MtrunA17_Chr2g0316611 | 32.275 | 189 | 105 | 2 | 189 | 354 | 25 | 213 | 7.49e-18 | 84.7 |
Msa0808930 | MtrunA17_Chr2g0316611 | 32.124 | 193 | 108 | 1 | 200 | 369 | 174 | 366 | 1.42e-14 | 75.1 |
Msa0808930 | MtrunA17_Chr6g0467061 | 33.161 | 193 | 106 | 1 | 200 | 369 | 88 | 280 | 8.77e-18 | 84.3 |
Msa0808930 | MtrunA17_Chr6g0467061 | 32.967 | 182 | 122 | 0 | 189 | 370 | 8 | 189 | 1.22e-16 | 80.9 |
Msa0808930 | MtrunA17_Chr6g0467061 | 34.637 | 179 | 94 | 2 | 199 | 354 | 156 | 334 | 4.61e-15 | 76.3 |
Msa0808930 | MtrunA17_Chr2g0316631 | 30.808 | 198 | 114 | 1 | 189 | 363 | 25 | 222 | 9.13e-18 | 83.6 |
Msa0808930 | MtrunA17_Chr2g0316631 | 32.386 | 176 | 119 | 0 | 200 | 375 | 105 | 280 | 1.13e-16 | 80.5 |
Msa0808930 | MtrunA17_Chr8g0383551 | 35.135 | 148 | 81 | 5 | 228 | 368 | 105 | 244 | 1.72e-16 | 80.9 |
Msa0808930 | MtrunA17_Chr5g0398011 | 36.937 | 111 | 70 | 0 | 246 | 356 | 35 | 145 | 9.61e-13 | 65.9 |
Msa0808930 | MtrunA17_Chr8g0377221 | 26.339 | 224 | 107 | 6 | 198 | 373 | 3 | 216 | 4.75e-12 | 66.2 |
Msa0808930 | MtrunA17_Chr8g0377221 | 31.481 | 162 | 101 | 2 | 193 | 353 | 67 | 219 | 3.67e-11 | 63.5 |
Msa0808930 | MtrunA17_Chr5g0398021 | 40.000 | 100 | 60 | 0 | 246 | 345 | 13 | 112 | 2.53e-11 | 61.6 |
Msa0808930 | MtrunA17_Chr1g0210831 | 30.657 | 137 | 95 | 0 | 242 | 378 | 609 | 745 | 3.66e-11 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0808930 | AT1G77660.1 | 56.335 | 442 | 163 | 5 | 10 | 443 | 2 | 421 | 2.39e-153 | 442 |
Msa0808930 | AT1G21920.1 | 67.683 | 328 | 93 | 4 | 115 | 441 | 100 | 415 | 2.24e-145 | 421 |
Msa0808930 | AT1G21920.2 | 67.742 | 279 | 77 | 4 | 115 | 392 | 100 | 366 | 1.75e-133 | 389 |
Msa0808930 | AT4G17080.1 | 48.901 | 364 | 158 | 5 | 82 | 435 | 157 | 502 | 4.20e-104 | 319 |
Msa0808930 | AT2G35170.1 | 49.162 | 358 | 129 | 9 | 81 | 426 | 126 | 442 | 1.53e-99 | 306 |
Msa0808930 | AT1G21980.1 | 37.968 | 187 | 115 | 1 | 194 | 379 | 69 | 255 | 1.81e-29 | 122 |
Msa0808930 | AT1G10900.2 | 38.286 | 175 | 108 | 0 | 199 | 373 | 10 | 184 | 2.40e-27 | 115 |
Msa0808930 | AT1G10900.2 | 34.532 | 139 | 68 | 1 | 198 | 313 | 55 | 193 | 1.88e-12 | 70.1 |
Msa0808930 | AT1G10900.2 | 37.374 | 99 | 62 | 0 | 190 | 288 | 93 | 191 | 5.58e-11 | 65.1 |
Msa0808930 | AT1G10900.1 | 38.286 | 175 | 108 | 0 | 199 | 373 | 10 | 184 | 2.40e-27 | 115 |
Msa0808930 | AT1G10900.1 | 34.532 | 139 | 68 | 1 | 198 | 313 | 55 | 193 | 1.88e-12 | 70.1 |
Msa0808930 | AT1G10900.1 | 37.374 | 99 | 62 | 0 | 190 | 288 | 93 | 191 | 5.58e-11 | 65.1 |
Msa0808930 | AT1G10900.3 | 38.286 | 175 | 108 | 0 | 199 | 373 | 10 | 184 | 2.40e-27 | 115 |
Msa0808930 | AT1G10900.3 | 34.532 | 139 | 68 | 1 | 198 | 313 | 55 | 193 | 1.88e-12 | 70.1 |
Msa0808930 | AT1G10900.3 | 37.374 | 99 | 62 | 0 | 190 | 288 | 93 | 191 | 5.58e-11 | 65.1 |
Msa0808930 | AT1G60890.1 | 36.000 | 175 | 112 | 0 | 199 | 373 | 10 | 184 | 2.71e-27 | 115 |
Msa0808930 | AT1G60890.1 | 35.115 | 131 | 85 | 0 | 245 | 375 | 10 | 140 | 1.21e-16 | 83.2 |
Msa0808930 | AT1G60890.1 | 39.394 | 99 | 60 | 0 | 190 | 288 | 93 | 191 | 5.17e-14 | 74.7 |
Msa0808930 | AT1G60890.1 | 31.579 | 152 | 103 | 1 | 198 | 348 | 55 | 206 | 2.49e-13 | 72.8 |
Msa0808930 | AT1G60890.2 | 36.000 | 175 | 112 | 0 | 199 | 373 | 22 | 196 | 3.61e-27 | 115 |
Msa0808930 | AT1G60890.2 | 35.115 | 131 | 85 | 0 | 245 | 375 | 22 | 152 | 1.61e-16 | 82.8 |
Msa0808930 | AT1G60890.2 | 39.394 | 99 | 60 | 0 | 190 | 288 | 105 | 203 | 5.90e-14 | 74.7 |
Msa0808930 | AT1G60890.2 | 31.579 | 152 | 103 | 1 | 198 | 348 | 67 | 218 | 3.27e-13 | 72.4 |
Msa0808930 | AT1G77740.2 | 38.547 | 179 | 109 | 1 | 194 | 371 | 70 | 248 | 4.97e-27 | 114 |
Msa0808930 | AT1G77740.2 | 38.889 | 126 | 77 | 0 | 248 | 373 | 79 | 204 | 3.76e-18 | 87.8 |
Msa0808930 | AT1G77740.1 | 38.547 | 179 | 109 | 1 | 194 | 371 | 70 | 248 | 4.97e-27 | 114 |
Msa0808930 | AT1G77740.1 | 38.889 | 126 | 77 | 0 | 248 | 373 | 79 | 204 | 3.76e-18 | 87.8 |
Msa0808930 | AT2G41210.1 | 36.111 | 180 | 109 | 1 | 197 | 370 | 61 | 240 | 6.26e-26 | 111 |
Msa0808930 | AT2G41210.1 | 31.739 | 230 | 149 | 3 | 198 | 420 | 91 | 319 | 4.38e-24 | 105 |
Msa0808930 | AT2G41210.1 | 39.062 | 128 | 78 | 0 | 248 | 375 | 72 | 199 | 1.22e-20 | 95.5 |
Msa0808930 | AT3G07960.1 | 35.882 | 170 | 109 | 0 | 201 | 370 | 28 | 197 | 3.36e-25 | 109 |
Msa0808930 | AT3G07960.1 | 32.298 | 161 | 109 | 0 | 198 | 358 | 48 | 208 | 1.06e-20 | 95.5 |
Msa0808930 | AT3G07960.1 | 37.302 | 126 | 79 | 0 | 248 | 373 | 29 | 154 | 1.72e-18 | 88.6 |
Msa0808930 | AT3G07960.3 | 35.882 | 170 | 109 | 0 | 201 | 370 | 28 | 197 | 3.82e-25 | 108 |
Msa0808930 | AT3G07960.3 | 32.298 | 161 | 109 | 0 | 198 | 358 | 48 | 208 | 1.19e-20 | 95.1 |
Msa0808930 | AT3G07960.3 | 37.302 | 126 | 79 | 0 | 248 | 373 | 29 | 154 | 2.11e-18 | 88.2 |
Msa0808930 | AT3G56960.2 | 33.143 | 175 | 117 | 0 | 198 | 372 | 70 | 244 | 5.07e-25 | 108 |
Msa0808930 | AT3G56960.2 | 32.418 | 182 | 122 | 1 | 198 | 379 | 93 | 273 | 2.08e-21 | 97.8 |
Msa0808930 | AT3G56960.2 | 37.500 | 128 | 80 | 0 | 248 | 375 | 74 | 201 | 4.19e-20 | 93.6 |
Msa0808930 | AT3G56960.1 | 33.143 | 175 | 117 | 0 | 198 | 372 | 70 | 244 | 5.07e-25 | 108 |
Msa0808930 | AT3G56960.1 | 32.418 | 182 | 122 | 1 | 198 | 379 | 93 | 273 | 2.08e-21 | 97.8 |
Msa0808930 | AT3G56960.1 | 37.500 | 128 | 80 | 0 | 248 | 375 | 74 | 201 | 4.19e-20 | 93.6 |
Msa0808930 | AT3G07960.2 | 35.882 | 170 | 109 | 0 | 201 | 370 | 28 | 197 | 5.13e-25 | 108 |
Msa0808930 | AT3G07960.2 | 32.298 | 161 | 109 | 0 | 198 | 358 | 48 | 208 | 1.51e-20 | 94.7 |
Msa0808930 | AT3G07960.2 | 37.302 | 126 | 79 | 0 | 248 | 373 | 29 | 154 | 2.63e-18 | 87.8 |
Msa0808930 | AT3G07960.4 | 35.882 | 170 | 109 | 0 | 201 | 370 | 28 | 197 | 5.13e-25 | 108 |
Msa0808930 | AT3G07960.4 | 32.298 | 161 | 109 | 0 | 198 | 358 | 48 | 208 | 1.51e-20 | 94.7 |
Msa0808930 | AT3G07960.4 | 37.302 | 126 | 79 | 0 | 248 | 373 | 29 | 154 | 2.63e-18 | 87.8 |
Msa0808930 | AT2G26420.1 | 36.250 | 160 | 102 | 0 | 201 | 360 | 54 | 213 | 8.42e-23 | 102 |
Msa0808930 | AT2G26420.1 | 37.302 | 126 | 79 | 0 | 248 | 373 | 55 | 180 | 3.18e-17 | 84.7 |
Msa0808930 | AT2G26420.1 | 34.667 | 150 | 98 | 0 | 198 | 347 | 74 | 223 | 2.25e-15 | 79.0 |
Msa0808930 | AT2G26420.2 | 36.250 | 160 | 102 | 0 | 201 | 360 | 54 | 213 | 9.47e-23 | 101 |
Msa0808930 | AT2G26420.2 | 37.302 | 126 | 79 | 0 | 248 | 373 | 55 | 180 | 3.59e-17 | 84.7 |
Msa0808930 | AT2G26420.2 | 34.667 | 150 | 98 | 0 | 198 | 347 | 74 | 223 | 2.43e-15 | 79.0 |
Msa0808930 | AT2G26420.3 | 36.250 | 160 | 102 | 0 | 201 | 360 | 54 | 213 | 9.47e-23 | 101 |
Msa0808930 | AT2G26420.3 | 37.302 | 126 | 79 | 0 | 248 | 373 | 55 | 180 | 3.59e-17 | 84.7 |
Msa0808930 | AT2G26420.3 | 34.667 | 150 | 98 | 0 | 198 | 347 | 74 | 223 | 2.43e-15 | 79.0 |
Msa0808930 | AT3G09920.3 | 31.980 | 197 | 130 | 1 | 177 | 373 | 34 | 226 | 1.85e-21 | 97.8 |
Msa0808930 | AT3G09920.3 | 31.953 | 169 | 115 | 0 | 190 | 358 | 66 | 234 | 1.78e-20 | 95.1 |
Msa0808930 | AT3G09920.3 | 34.694 | 147 | 73 | 2 | 190 | 313 | 89 | 235 | 5.27e-16 | 81.3 |
Msa0808930 | AT3G09920.3 | 34.375 | 128 | 84 | 0 | 248 | 375 | 55 | 182 | 1.01e-13 | 73.9 |
Msa0808930 | AT3G09920.4 | 31.980 | 197 | 130 | 1 | 177 | 373 | 34 | 226 | 1.85e-21 | 97.8 |
Msa0808930 | AT3G09920.4 | 31.953 | 169 | 115 | 0 | 190 | 358 | 66 | 234 | 1.78e-20 | 95.1 |
Msa0808930 | AT3G09920.4 | 34.694 | 147 | 73 | 2 | 190 | 313 | 89 | 235 | 5.27e-16 | 81.3 |
Msa0808930 | AT3G09920.4 | 34.375 | 128 | 84 | 0 | 248 | 375 | 55 | 182 | 1.01e-13 | 73.9 |
Msa0808930 | AT3G09920.2 | 31.980 | 197 | 130 | 1 | 177 | 373 | 34 | 226 | 1.85e-21 | 97.8 |
Msa0808930 | AT3G09920.2 | 31.953 | 169 | 115 | 0 | 190 | 358 | 66 | 234 | 1.78e-20 | 95.1 |
Msa0808930 | AT3G09920.2 | 34.694 | 147 | 73 | 2 | 190 | 313 | 89 | 235 | 5.27e-16 | 81.3 |
Msa0808930 | AT3G09920.2 | 34.375 | 128 | 84 | 0 | 248 | 375 | 55 | 182 | 1.01e-13 | 73.9 |
Msa0808930 | AT3G09920.1 | 31.980 | 197 | 130 | 1 | 177 | 373 | 34 | 226 | 1.85e-21 | 97.8 |
Msa0808930 | AT3G09920.1 | 31.953 | 169 | 115 | 0 | 190 | 358 | 66 | 234 | 1.78e-20 | 95.1 |
Msa0808930 | AT3G09920.1 | 34.694 | 147 | 73 | 2 | 190 | 313 | 89 | 235 | 5.27e-16 | 81.3 |
Msa0808930 | AT3G09920.1 | 34.375 | 128 | 84 | 0 | 248 | 375 | 55 | 182 | 1.01e-13 | 73.9 |
Find 153 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGACATGGTTATGGTGTTTA+TGG | 0.169103 | 5_3:-34376857 | Msa0808930:CDS |
TATACTGGTGATTGTTATTC+TGG | 0.202956 | 5_3:-34376830 | Msa0808930:CDS |
ACTACTGCTGCACCGATTCT+AGG | 0.212623 | 5_3:-34377382 | Msa0808930:CDS |
CTCCACTTGGTCATCATTCC+GGG | 0.231362 | 5_3:+34374994 | None:intergenic |
AAATATACAGGGGAGTATTT+TGG | 0.233941 | 5_3:-34375791 | Msa0808930:CDS |
TTCGTTCTCCTCTGCTGAAC+CGG | 0.245865 | 5_3:+34377108 | None:intergenic |
TCTCCACTTGGTCATCATTC+CGG | 0.246957 | 5_3:+34374993 | None:intergenic |
TATTCTGGTGAATGGTTTAA+TGG | 0.248444 | 5_3:-34376815 | Msa0808930:CDS |
TTCTCATTCTCGTTCAAGTT+CGG | 0.263387 | 5_3:-34377431 | Msa0808930:CDS |
GAAATGGGCTTCAATGAAAT+TGG | 0.278087 | 5_3:-34374656 | Msa0808930:three_prime_UTR |
GTGGTTGTTTCCATGTTTAT+TGG | 0.296317 | 5_3:+34377643 | None:intergenic |
TGGTTGTTTCCATGTTTATT+GGG | 0.305940 | 5_3:+34377644 | None:intergenic |
AACAGTGTCCATTCGCAAAA+TGG | 0.316812 | 5_3:+34375741 | None:intergenic |
GGCTAGGGGAAGTAGATATA+AGG | 0.322034 | 5_3:-34376900 | Msa0808930:CDS |
TCTCATTCTCGTTCAAGTTC+GGG | 0.324467 | 5_3:-34377430 | Msa0808930:CDS |
TCTCGTTCAAGTTCGGGTTA+TGG | 0.331030 | 5_3:-34377424 | Msa0808930:CDS |
GGAGACAAAATGCATGGATT+TGG | 0.331061 | 5_3:-34375770 | Msa0808930:CDS |
ACACCGAAGCAAAGAGGATT+TGG | 0.332044 | 5_3:+34377585 | None:intergenic |
CCATTACTGCTTTCTCCACT+TGG | 0.336002 | 5_3:+34374981 | None:intergenic |
GAATGCAAGTGGGGTTGAAT+AGG | 0.341812 | 5_3:+34378046 | None:intergenic |
TACTAATTATATGAGTGATT+TGG | 0.345543 | 5_3:-34374811 | Msa0808930:three_prime_UTR |
GACTATACACGGCGCAGAAC+CGG | 0.365248 | 5_3:+34377796 | None:intergenic |
TGCAGCAGTGAAAGCTGTTC+AGG | 0.366394 | 5_3:-34374927 | Msa0808930:CDS |
AATGGACAAAGTCATGGTTT+TGG | 0.371589 | 5_3:-34376797 | Msa0808930:CDS |
TATGTTGGTGAATTTAAGTT+TGG | 0.373929 | 5_3:-34376746 | Msa0808930:CDS |
GTTTACGATGAAAGGTGTTT+TGG | 0.373933 | 5_3:+34377947 | None:intergenic |
AGCTTTCACTGCTGCAACTC+TGG | 0.381864 | 5_3:+34374934 | None:intergenic |
TATGAAGGTGATTGGGTTGA+TGG | 0.387527 | 5_3:-34376953 | Msa0808930:CDS |
CAGCAGTAGTAATAATAAAC+CGG | 0.411732 | 5_3:+34377395 | None:intergenic |
AAGCAAAGAGGATTTGGTTC+GGG | 0.413038 | 5_3:+34377591 | None:intergenic |
AAGCAGTAATGGCAGCAAAC+AGG | 0.414541 | 5_3:-34374970 | Msa0808930:CDS |
CTTGGTCATCATTCCGGGGA+TGG | 0.417287 | 5_3:+34374999 | None:intergenic |
CTCTCTGCCGCCACAAACAC+TGG | 0.424205 | 5_3:-34375615 | Msa0808930:CDS |
CTAAGAAGAAGAAGAATAGA+AGG | 0.425710 | 5_3:+34377845 | None:intergenic |
GGTGTTTATACATTTCGAAA+TGG | 0.427912 | 5_3:-34375680 | Msa0808930:CDS |
AGGAATGGAGATAAATATAC+AGG | 0.428752 | 5_3:-34375803 | Msa0808930:CDS |
AACGAGAATGAGAACCGAAC+CGG | 0.429128 | 5_3:+34377440 | None:intergenic |
GATGGAAAATATGATGGTTA+TGG | 0.429760 | 5_3:-34376935 | Msa0808930:CDS |
TGAAATGTTACCGGCGCAAC+CGG | 0.429994 | 5_3:-34377773 | Msa0808930:five_prime_UTR |
ATGGAATTGAAAGCTGGGCT+AGG | 0.431240 | 5_3:-34376916 | Msa0808930:CDS |
GTGATTGTTATTCTGGTGAA+TGG | 0.433191 | 5_3:-34376823 | Msa0808930:CDS |
TGTCCCATTCACCACATCTT+CGG | 0.434580 | 5_3:+34375654 | None:intergenic |
TTTGGTTCTAAACATGGTCT+TGG | 0.434793 | 5_3:-34376728 | Msa0808930:CDS |
CTTCACAAAGTAACTTGTAC+AGG | 0.435394 | 5_3:-34374719 | Msa0808930:three_prime_UTR |
GAAGGTCGTCGACAAGGTTA+TGG | 0.435450 | 5_3:-34375701 | Msa0808930:CDS |
TGCTGCAACTCTGGCAGCAA+TGG | 0.439653 | 5_3:+34374943 | None:intergenic |
GTGGAAGATATGAAGGTGAT+TGG | 0.439954 | 5_3:-34376961 | Msa0808930:CDS |
TGGGTCCCACTGAACCGATA+TGG | 0.440142 | 5_3:+34377314 | None:intergenic |
CGTACGGTGGAGATTGAATC+TGG | 0.445745 | 5_3:-34377672 | Msa0808930:five_prime_UTR |
AGGAGTCATCCCGATTTAAT+CGG | 0.447606 | 5_3:+34374506 | None:intergenic |
TTCTACGAAGGAGAATTTCA+TGG | 0.448504 | 5_3:-34377025 | Msa0808930:CDS |
AAACCGGTTCAATGGTTCAT+AGG | 0.449347 | 5_3:-34377136 | Msa0808930:CDS |
TCTTAGTTACCGTGTTTATC+CGG | 0.453318 | 5_3:-34377828 | Msa0808930:five_prime_UTR |
TGTATAGTCTGAAATGTTAC+CGG | 0.456047 | 5_3:-34377782 | Msa0808930:five_prime_UTR |
AATGCAAGTGGGGTTGAATA+GGG | 0.459783 | 5_3:+34378047 | None:intergenic |
TCGTTCTCCTCTGCTGAACC+GGG | 0.465117 | 5_3:+34377109 | None:intergenic |
GAAAGCTGTTCAGGATAGAA+TGG | 0.466671 | 5_3:-34374918 | Msa0808930:CDS |
GAACCAAATCCTCTTTGCTT+CGG | 0.466878 | 5_3:-34377588 | Msa0808930:CDS |
TCTGTGCCATCCGATTAAAT+CGG | 0.467967 | 5_3:-34374516 | Msa0808930:three_prime_UTR |
GAAGCAAAGAGGATTTGGTT+CGG | 0.470488 | 5_3:+34377590 | None:intergenic |
TGGTTCGGGTGAGTTTAGTT+TGG | 0.471218 | 5_3:+34377605 | None:intergenic |
GCGAATGGACACTGTTATGA+AGG | 0.474775 | 5_3:-34375734 | Msa0808930:CDS |
CAAGGTTTGAGACATGGTTA+TGG | 0.475027 | 5_3:-34376866 | Msa0808930:CDS |
GTTGAATAGGGAGCGTTGGA+TGG | 0.475848 | 5_3:+34378059 | None:intergenic |
GTGGTTGTTGTAATCTTCGT+TGG | 0.477757 | 5_3:+34377870 | None:intergenic |
ATCAAGTTTAAAAGTGAATG+AGG | 0.479059 | 5_3:-34374877 | Msa0808930:exon |
TAGGCTCGGAATGGAGGATC+GGG | 0.480554 | 5_3:+34377549 | None:intergenic |
GGAATGGAGGATCGGGTGGT+TGG | 0.485174 | 5_3:+34377556 | None:intergenic |
TGGTTAAATTGCAGGCTGCT+AGG | 0.485769 | 5_3:-34375045 | Msa0808930:intron |
TCTGATGGAAGTTGTTATGT+TGG | 0.486647 | 5_3:-34376761 | Msa0808930:CDS |
AACGACTCACGATGAAAAGT+TGG | 0.489483 | 5_3:+34374453 | None:intergenic |
GGCTGTCCTTACATCAGCTC+AGG | 0.497399 | 5_3:-34375594 | Msa0808930:intron |
CTACTCATCCTAGCTTCACT+TGG | 0.498769 | 5_3:-34374569 | Msa0808930:three_prime_UTR |
TGGAATTGAAAGCTGGGCTA+GGG | 0.501451 | 5_3:-34376915 | Msa0808930:CDS |
TTTCATGGTGGAAAGTGTAA+TGG | 0.501723 | 5_3:-34377010 | Msa0808930:CDS |
TCTCCTATGAACCATTGAAC+CGG | 0.504381 | 5_3:+34377133 | None:intergenic |
TAATACTCTTCAACCTCCTC+CGG | 0.505275 | 5_3:+34374755 | None:intergenic |
CTGTGCCATCCGATTAAATC+GGG | 0.505503 | 5_3:-34374515 | Msa0808930:three_prime_UTR |
ACTGATAATTAATCTTTACA+TGG | 0.507976 | 5_3:+34374694 | None:intergenic |
TGGAAGATATGAAGGTGATT+GGG | 0.511435 | 5_3:-34376960 | Msa0808930:CDS |
GGTGTTCAATCTTGTTCTGA+TGG | 0.512152 | 5_3:-34376776 | Msa0808930:CDS |
TTTGTGAGTGGAAGATATGA+AGG | 0.513634 | 5_3:-34376968 | Msa0808930:CDS |
TGGTGACAATCTCACGATAC+AGG | 0.515168 | 5_3:-34377735 | Msa0808930:five_prime_UTR |
CGATCCTCCATTCCGAGCCT+AGG | 0.516377 | 5_3:-34377547 | Msa0808930:CDS |
CAAATACCTGAGCTGATGTA+AGG | 0.519526 | 5_3:+34375588 | None:intergenic |
ATGGTTATGGAATTGAAAGC+TGG | 0.525844 | 5_3:-34376922 | Msa0808930:CDS |
GATTAAATCGGGATGACTCC+TGG | 0.526202 | 5_3:-34374504 | Msa0808930:three_prime_UTR |
TAAGATTTGCATCTCGAACC+AGG | 0.532658 | 5_3:+34374486 | None:intergenic |
CCAAGTGGAGAAAGCAGTAA+TGG | 0.535060 | 5_3:-34374981 | Msa0808930:CDS |
TGGGGTTGAATAGGGAGCGT+TGG | 0.537364 | 5_3:+34378055 | None:intergenic |
TATAAGGGTTGTTATAAACA+AGG | 0.540310 | 5_3:-34376884 | Msa0808930:CDS |
GAATCTACAATTCGAAGCAA+AGG | 0.541205 | 5_3:+34374835 | None:intergenic |
GTTTCGCAGTTTACGATGAA+AGG | 0.543197 | 5_3:+34377939 | None:intergenic |
CTAGGCTCGGAATGGAGGAT+CGG | 0.544037 | 5_3:+34377548 | None:intergenic |
TTTAAGTTTGGTTCTAAACA+TGG | 0.544906 | 5_3:-34376734 | Msa0808930:CDS |
GTAAGGACAGCCAGTGTTTG+TGG | 0.545118 | 5_3:+34375605 | None:intergenic |
TGGTTTAATGGACAAAGTCA+TGG | 0.545446 | 5_3:-34376803 | Msa0808930:CDS |
TGGGTTGATGGAAAATATGA+TGG | 0.547236 | 5_3:-34376941 | Msa0808930:CDS |
CTTCTTCGTTGACGGAACCT+AGG | 0.548177 | 5_3:+34377530 | None:intergenic |
AGCAGTAATGGCAGCAAACA+GGG | 0.549776 | 5_3:-34374969 | Msa0808930:CDS |
ACGAGAATGAGAACCGAACC+GGG | 0.554023 | 5_3:+34377441 | None:intergenic |
GAGACCGAAGATGTGGTGAA+TGG | 0.560592 | 5_3:-34375658 | Msa0808930:CDS |
AAAGCTGTTCAGGATAGAAT+GGG | 0.560882 | 5_3:-34374917 | Msa0808930:CDS |
GCTAGGGGAAGTAGATATAA+GGG | 0.563984 | 5_3:-34376899 | Msa0808930:CDS |
GGTGGAAAGTGTAATGGAAG+TGG | 0.564236 | 5_3:-34377004 | Msa0808930:CDS |
CAATGGTTCATAGGAGAACC+CGG | 0.565459 | 5_3:-34377127 | Msa0808930:CDS |
CGTGAAAGTGTTGTTGAAAG+AGG | 0.566990 | 5_3:-34377080 | Msa0808930:CDS |
AGAAGAAGAATAGAAGGTTG+TGG | 0.570490 | 5_3:+34377851 | None:intergenic |
GACGGAACCTAGGCTCGGAA+TGG | 0.571344 | 5_3:+34377540 | None:intergenic |
CTGGTGGGACCCAATAAACA+TGG | 0.574648 | 5_3:-34377653 | Msa0808930:exon |
GACGGGAATTTAAAACGACT+CGG | 0.577658 | 5_3:-34377181 | Msa0808930:CDS |
AAAATGCGATAAACCATCCC+CGG | 0.578506 | 5_3:-34375012 | Msa0808930:CDS |
GGAACCTAGGCTCGGAATGG+AGG | 0.582642 | 5_3:+34377543 | None:intergenic |
AGACCGAAGATGTGGTGAAT+GGG | 0.583099 | 5_3:-34375657 | Msa0808930:CDS |
TCAAGTTTAAAAGTGAATGA+GGG | 0.586130 | 5_3:-34374876 | Msa0808930:exon |
GTGGCGGCAGAGAGTGCTTG+AGG | 0.591059 | 5_3:+34375624 | None:intergenic |
GCTCGGAATGGAGGATCGGG+TGG | 0.596933 | 5_3:+34377552 | None:intergenic |
GAGAAGGTAAGAATGCAAGT+GGG | 0.597075 | 5_3:+34378036 | None:intergenic |
AGGAGAACCCGGTTCAGCAG+AGG | 0.599107 | 5_3:-34377116 | Msa0808930:CDS |
GTCATCCCGATTTAATCGGA+TGG | 0.599958 | 5_3:+34374510 | None:intergenic |
CGAAATGGAGACCGAAGATG+TGG | 0.602119 | 5_3:-34375665 | Msa0808930:CDS |
TCCACTTGGTCATCATTCCG+GGG | 0.602167 | 5_3:+34374995 | None:intergenic |
GACACTGTTATGAAGGAGCA+TGG | 0.603134 | 5_3:-34375727 | Msa0808930:CDS |
TGAGAAGGTAAGAATGCAAG+TGG | 0.607754 | 5_3:+34378035 | None:intergenic |
GAAGTTGAATTCTACAGCAA+TGG | 0.609398 | 5_3:-34377052 | Msa0808930:CDS |
CGGTGGAGATTGAATCTGGT+GGG | 0.609543 | 5_3:-34377668 | Msa0808930:five_prime_UTR |
TCGTTGACGGAACCTAGGCT+CGG | 0.610315 | 5_3:+34377535 | None:intergenic |
AGAAGGTAAGAATGCAAGTG+GGG | 0.610475 | 5_3:+34378037 | None:intergenic |
GAAGAGAAGAGAAAATCGTA+CGG | 0.611293 | 5_3:-34377688 | Msa0808930:five_prime_UTR |
GTTTATGAAATAAAGCGCTA+CGG | 0.614497 | 5_3:+34377255 | None:intergenic |
TATGAAGGAGCATGGCATGA+AGG | 0.616571 | 5_3:-34375719 | Msa0808930:CDS |
TATAAACAAGGTTTGAGACA+TGG | 0.620037 | 5_3:-34376872 | Msa0808930:CDS |
TGGCATGAAGGTCGTCGACA+AGG | 0.621349 | 5_3:-34375707 | Msa0808930:CDS |
GGAATTGAAAGCTGGGCTAG+GGG | 0.626911 | 5_3:-34376914 | Msa0808930:CDS |
GTTCGGGTTATGGTTCAACC+CGG | 0.630062 | 5_3:-34377414 | Msa0808930:CDS |
AGCAATGGTGATTTCTACGA+AGG | 0.631450 | 5_3:-34377037 | Msa0808930:CDS |
AGCAGTAGTAATAATAAACC+GGG | 0.631912 | 5_3:+34377396 | None:intergenic |
GTGAAAGTGTTGTTGAAAGA+GGG | 0.632746 | 5_3:-34377079 | Msa0808930:CDS |
ATATATACGAAGTGATGAGA+AGG | 0.635120 | 5_3:+34378020 | None:intergenic |
TGGTTATGGAATTGAAAGCT+GGG | 0.641123 | 5_3:-34376921 | Msa0808930:CDS |
GGAATGGAGATAAATATACA+GGG | 0.645709 | 5_3:-34375802 | Msa0808930:CDS |
GCTGTTCAGGATAGAATGGG+TGG | 0.647734 | 5_3:-34374914 | Msa0808930:CDS |
AGAAGAACACCGAAGCAAAG+AGG | 0.656694 | 5_3:+34377579 | None:intergenic |
ACGGTGGAGATTGAATCTGG+TGG | 0.661963 | 5_3:-34377669 | Msa0808930:five_prime_UTR |
GAGAAGAGAAAATCGTACGG+TGG | 0.673930 | 5_3:-34377685 | Msa0808930:five_prime_UTR |
TACGAAGGAGAATTTCATGG+TGG | 0.674011 | 5_3:-34377022 | Msa0808930:CDS |
TCCCCGGAATGATGACCAAG+TGG | 0.680010 | 5_3:-34374996 | Msa0808930:CDS |
ATTTGGAAGATGCGCCACCC+TGG | 0.687838 | 5_3:-34374794 | Msa0808930:three_prime_UTR |
AGGACAGCCAGTGTTTGTGG+CGG | 0.692136 | 5_3:+34375608 | None:intergenic |
AGATGTGGTGAATGGGACAA+TGG | 0.693923 | 5_3:-34375650 | Msa0808930:CDS |
TCGTGAGATTGTCACCACCA+CGG | 0.694837 | 5_3:+34377741 | None:intergenic |
GAATGGAGATAAATATACAG+GGG | 0.695134 | 5_3:-34375801 | Msa0808930:CDS |
GTAACATTTCAGACTATACA+CGG | 0.742853 | 5_3:+34377785 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TCTCAAGTTTTTATTTAAAT+TGG | - | chr5_3:34375794-34375813 | Msa0808930:CDS | 15.0% |
!!! | CTCAAGTTTTTATTTAAATT+GGG | - | chr5_3:34375795-34375814 | Msa0808930:CDS | 15.0% |
!! | CTTAACCATTATTATTATAT+AGG | - | chr5_3:34376542-34376561 | Msa0808930:intron | 15.0% |
!!! | TTTATAAATAGTACCTTTTA+TGG | - | chr5_3:34377186-34377205 | Msa0808930:CDS | 15.0% |
!! | TTATTAACATTTACCATAAA+AGG | + | chr5_3:34377202-34377221 | None:intergenic | 15.0% |
!!! | TCATTTACGTTAATTTTTTT+TGG | - | chr5_3:34377395-34377414 | Msa0808930:CDS | 15.0% |
!!! | GTATTCTATTTTTTCCATAT+CGG | - | chr5_3:34375132-34375151 | Msa0808930:intron | 20.0% |
!!! | TGAATGTTTTAAAACAGAAA+CGG | + | chr5_3:34375256-34375275 | None:intergenic | 20.0% |
!!! | TTTCTGTTTTAAAACATTCA+TGG | - | chr5_3:34375256-34375275 | Msa0808930:intron | 20.0% |
!!! | TTCTGTTTTAAAACATTCAT+GGG | - | chr5_3:34375257-34375276 | Msa0808930:intron | 20.0% |
!! | AAAAAAAAACTCACCTAAAA+TGG | + | chr5_3:34375764-34375783 | None:intergenic | 20.0% |
!!! | AGTTCATAACATTTTCATAT+CGG | + | chr5_3:34376042-34376061 | None:intergenic | 20.0% |
!!! | TATACTCTATTGTTGATTTT+TGG | - | chr5_3:34376225-34376244 | Msa0808930:intron | 20.0% |
!! | AGCTTCCTATATAATAATAA+TGG | + | chr5_3:34376550-34376569 | None:intergenic | 20.0% |
!! | TTATTATTATATAGGAAGCT+AGG | - | chr5_3:34376550-34376569 | Msa0808930:intron | 20.0% |
!! | TATTATTATATAGGAAGCTA+GGG | - | chr5_3:34376551-34376570 | Msa0808930:intron | 20.0% |
!!! | AAAATAGGGATATTTTCAAT+AGG | + | chr5_3:34377313-34377332 | None:intergenic | 20.0% |
!! | AAAGTAAGGATCTAAAAATA+GGG | + | chr5_3:34377327-34377346 | None:intergenic | 20.0% |
!! | AAAAGTAAGGATCTAAAAAT+AGG | + | chr5_3:34377328-34377347 | None:intergenic | 20.0% |
!!! | ATTTTTTTTGGTTAAATTGC+AGG | - | chr5_3:34377407-34377426 | Msa0808930:CDS | 20.0% |
!! | TACTAATTATATGAGTGATT+TGG | - | chr5_3:34377649-34377668 | Msa0808930:exon | 20.0% |
!! | ACTGATAATTAATCTTTACA+TGG | + | chr5_3:34377769-34377788 | None:intergenic | 20.0% |
!!! | TAGTACTTTTTTTGATGAAA+TGG | - | chr5_3:34377788-34377807 | Msa0808930:five_prime_UTR | 20.0% |
!!! | AGTACTTTTTTTGATGAAAT+GGG | - | chr5_3:34377789-34377808 | Msa0808930:five_prime_UTR | 20.0% |
! | GAAGAAGAAAAAACAAAAAC+TGG | + | chr5_3:34374562-34374581 | None:intergenic | 25.0% |
! | TAAAAATAACCGGATAAACA+CGG | + | chr5_3:34374644-34374663 | None:intergenic | 25.0% |
!!! | TTAGTTTGGCTATTGTTTTT+TGG | + | chr5_3:34374844-34374863 | None:intergenic | 25.0% |
! | ATAAGAAAAAGAAGAAAACC+CGG | - | chr5_3:34375001-34375020 | Msa0808930:CDS | 25.0% |
!!! | GTTTATCATTATTTTGTGAG+TGG | - | chr5_3:34375480-34375499 | Msa0808930:intron | 25.0% |
! | TATAAGGGTTGTTATAAACA+AGG | - | chr5_3:34375576-34375595 | Msa0808930:intron | 25.0% |
!! | TATGTTGGTGAATTTAAGTT+TGG | - | chr5_3:34375714-34375733 | Msa0808930:CDS | 25.0% |
!!! | TTTAAGTTTGGTTCTAAACA+TGG | - | chr5_3:34375726-34375745 | Msa0808930:CDS | 25.0% |
!!! | ATGTGATTTTCTAAGATTAC+TGG | + | chr5_3:34375882-34375901 | None:intergenic | 25.0% |
!! | GTTCATAACATTTTCATATC+GGG | + | chr5_3:34376041-34376060 | None:intergenic | 25.0% |
! | AAAATTGTGAAAGACCAAAA+TGG | - | chr5_3:34376070-34376089 | Msa0808930:intron | 25.0% |
!! | TTTGACCATTTATGTTCTTT+TGG | - | chr5_3:34376162-34376181 | Msa0808930:intron | 25.0% |
!! | TTGACCATTTATGTTCTTTT+GGG | - | chr5_3:34376163-34376182 | Msa0808930:intron | 25.0% |
!! | GGAATTTTTCTTTGTTCTAT+AGG | - | chr5_3:34376246-34376265 | Msa0808930:intron | 25.0% |
!! | TTGATAATCCTCAAATTCTA+TGG | - | chr5_3:34376296-34376315 | Msa0808930:intron | 25.0% |
! | TGATAATCCTCAAATTCTAT+GGG | - | chr5_3:34376297-34376316 | Msa0808930:intron | 25.0% |
! | CATTGTTTGACAAGTTAAAA+GGG | - | chr5_3:34376402-34376421 | Msa0808930:intron | 25.0% |
! | ATTGTCAAATGACATTAAGA+AGG | + | chr5_3:34376478-34376497 | None:intergenic | 25.0% |
! | TTTGCAATATCAATAGTAGT+AGG | - | chr5_3:34376497-34376516 | Msa0808930:intron | 25.0% |
! | TGAGTTTATTTGTAGGAAAA+AGG | + | chr5_3:34376920-34376939 | None:intergenic | 25.0% |
! | TTCTGAATGAGTTTATTTGT+AGG | + | chr5_3:34376927-34376946 | None:intergenic | 25.0% |
! | TCATGAGTTAATATCGAAAT+TGG | - | chr5_3:34376957-34376976 | Msa0808930:CDS | 25.0% |
!! | TTAGATAAGTTTTACAGACA+CGG | + | chr5_3:34377007-34377026 | None:intergenic | 25.0% |
! | ACTAATTAGACTTGTATTTG+TGG | - | chr5_3:34377033-34377052 | Msa0808930:CDS | 25.0% |
! | AGAACGCTCAATAATTTATT+AGG | + | chr5_3:34377141-34377160 | None:intergenic | 25.0% |
!! | ATTATTGAGCGTTCTTTTAA+TGG | - | chr5_3:34377146-34377165 | Msa0808930:CDS | 25.0% |
!!! | TACTACAGTGAAATTGATTT+TGG | + | chr5_3:34377228-34377247 | None:intergenic | 25.0% |
!!! | AGCAACAACCATATTTTTAT+TGG | - | chr5_3:34377247-34377266 | Msa0808930:CDS | 25.0% |
! | TGACAGTACCAATAAAAATA+TGG | + | chr5_3:34377258-34377277 | None:intergenic | 25.0% |
! | TCACTTTAACATGAAAAGTA+AGG | + | chr5_3:34377341-34377360 | None:intergenic | 25.0% |
! | ATCAAGTTTAAAAGTGAATG+AGG | - | chr5_3:34377583-34377602 | Msa0808930:CDS | 25.0% |
! | TCAAGTTTAAAAGTGAATGA+GGG | - | chr5_3:34377584-34377603 | Msa0808930:CDS | 25.0% |
ATATATACGAAGTGATGAGA+AGG | + | chr5_3:34374443-34374462 | None:intergenic | 30.0% | |
!!! | TTTGGTTTTTGTTTGAGCTT+TGG | + | chr5_3:34374498-34374517 | None:intergenic | 30.0% |
CTAAGAAGAAGAAGAATAGA+AGG | + | chr5_3:34374618-34374637 | None:intergenic | 30.0% | |
!!! | GTTTATCCGGTTATTTTTAC+CGG | - | chr5_3:34374645-34374664 | Msa0808930:three_prime_UTR | 30.0% |
GTAACATTTCAGACTATACA+CGG | + | chr5_3:34374678-34374697 | None:intergenic | 30.0% | |
! | TGTATAGTCTGAAATGTTAC+CGG | - | chr5_3:34374678-34374697 | Msa0808930:three_prime_UTR | 30.0% |
! | TGGTTGTTTCCATGTTTATT+GGG | + | chr5_3:34374819-34374838 | None:intergenic | 30.0% |
GTAAAAATCTTCTTCGTTGA+CGG | + | chr5_3:34374941-34374960 | None:intergenic | 30.0% | |
AGCAGTAGTAATAATAAACC+GGG | + | chr5_3:34375067-34375086 | None:intergenic | 30.0% | |
CAGCAGTAGTAATAATAAAC+CGG | + | chr5_3:34375068-34375087 | None:intergenic | 30.0% | |
AGACTGAAAAAACCTAGAAT+CGG | + | chr5_3:34375093-34375112 | None:intergenic | 30.0% | |
! | TAGAATCAGCAACACATTTT+CGG | + | chr5_3:34375175-34375194 | None:intergenic | 30.0% |
! | GTTTATGAAATAAAGCGCTA+CGG | + | chr5_3:34375208-34375227 | None:intergenic | 30.0% |
!!! | GTTTTAAAACATTCATGGGA+CGG | - | chr5_3:34375261-34375280 | Msa0808930:intron | 30.0% |
!!! | TTTTAAAACATTCATGGGAC+GGG | - | chr5_3:34375262-34375281 | Msa0808930:intron | 30.0% |
GATGGAAAATATGATGGTTA+TGG | - | chr5_3:34375525-34375544 | Msa0808930:intron | 30.0% | |
! | TATAAACAAGGTTTGAGACA+TGG | - | chr5_3:34375588-34375607 | Msa0808930:intron | 30.0% |
! | GGTGTTTATGGATTTTATAC+TGG | - | chr5_3:34375615-34375634 | Msa0808930:CDS | 30.0% |
! | TATACTGGTGATTGTTATTC+TGG | - | chr5_3:34375630-34375649 | Msa0808930:CDS | 30.0% |
TATTCTGGTGAATGGTTTAA+TGG | - | chr5_3:34375645-34375664 | Msa0808930:CDS | 30.0% | |
! | ATATGAGTGAAGAACCATTT+TGG | + | chr5_3:34376087-34376106 | None:intergenic | 30.0% |
CATACCCAAAAGAACATAAA+TGG | + | chr5_3:34376170-34376189 | None:intergenic | 30.0% | |
AAATTAGCCCATAGAATTTG+AGG | + | chr5_3:34376307-34376326 | None:intergenic | 30.0% | |
GCATTGTTTGACAAGTTAAA+AGG | - | chr5_3:34376401-34376420 | Msa0808930:intron | 30.0% | |
ACATAACCAACTATAGTCTA+GGG | + | chr5_3:34376584-34376603 | None:intergenic | 30.0% | |
TACATAACCAACTATAGTCT+AGG | + | chr5_3:34376585-34376604 | None:intergenic | 30.0% | |
!! | ACTCTGTTACATTTTGATGT+AGG | - | chr5_3:34376637-34376656 | Msa0808930:intron | 30.0% |
!! | GTTACATTTTGATGTAGGAA+TGG | - | chr5_3:34376642-34376661 | Msa0808930:intron | 30.0% |
AGGAATGGAGATAAATATAC+AGG | - | chr5_3:34376657-34376676 | Msa0808930:intron | 30.0% | |
GGAATGGAGATAAATATACA+GGG | - | chr5_3:34376658-34376677 | Msa0808930:intron | 30.0% | |
GAATGGAGATAAATATACAG+GGG | - | chr5_3:34376659-34376678 | Msa0808930:intron | 30.0% | |
!!! | AAATATACAGGGGAGTATTT+TGG | - | chr5_3:34376669-34376688 | Msa0808930:intron | 30.0% |
!! | TATTTTGGAGACAAAATGCA+TGG | - | chr5_3:34376684-34376703 | Msa0808930:intron | 30.0% |
GGTGTTTATACATTTCGAAA+TGG | - | chr5_3:34376780-34376799 | Msa0808930:CDS | 30.0% | |
!!! | AGGTCTAGTGTTTTTTAAGA+AGG | + | chr5_3:34376984-34377003 | None:intergenic | 30.0% |
TCATGGAAATATTACCTGAA+TGG | - | chr5_3:34377081-34377100 | Msa0808930:CDS | 30.0% | |
GTACTATTTATAAATCCCAC+AGG | + | chr5_3:34377180-34377199 | None:intergenic | 30.0% | |
!!! | GTTTACGATGAAAGGTGTTT+TGG | + | chr5_3:34374516-34374535 | None:intergenic | 35.0% |
AGAAGAAGAATAGAAGGTTG+TGG | + | chr5_3:34374612-34374631 | None:intergenic | 35.0% | |
TCTTAGTTACCGTGTTTATC+CGG | - | chr5_3:34374632-34374651 | Msa0808930:three_prime_UTR | 35.0% | |
GAAGAGAAGAGAAAATCGTA+CGG | - | chr5_3:34374772-34374791 | Msa0808930:three_prime_UTR | 35.0% | |
! | GTGGTTGTTTCCATGTTTAT+TGG | + | chr5_3:34374820-34374839 | None:intergenic | 35.0% |
!!! | TTGGCTATTGTTTTTTGGAG+TGG | + | chr5_3:34374839-34374858 | None:intergenic | 35.0% |
AAAAAGAAGAAAACCCGGTT+CGG | - | chr5_3:34375006-34375025 | Msa0808930:CDS | 35.0% | |
! | TTCTCATTCTCGTTCAAGTT+CGG | - | chr5_3:34375029-34375048 | Msa0808930:CDS | 35.0% |
!!! | TTTTTTCCATATCGGTTCAG+TGG | - | chr5_3:34375140-34375159 | Msa0808930:intron | 35.0% |
!!! | TTTTTCCATATCGGTTCAGT+GGG | - | chr5_3:34375141-34375160 | Msa0808930:intron | 35.0% |
TTCCAAAGGAAGTGAAAAAC+CGG | - | chr5_3:34375308-34375327 | Msa0808930:intron | 35.0% | |
!! | GTGAAAGTGTTGTTGAAAGA+GGG | - | chr5_3:34375381-34375400 | Msa0808930:intron | 35.0% |
GAAGTTGAATTCTACAGCAA+TGG | - | chr5_3:34375408-34375427 | Msa0808930:intron | 35.0% | |
TTCTACGAAGGAGAATTTCA+TGG | - | chr5_3:34375435-34375454 | Msa0808930:intron | 35.0% | |
! | TTTCATGGTGGAAAGTGTAA+TGG | - | chr5_3:34375450-34375469 | Msa0808930:intron | 35.0% |
TTTGTGAGTGGAAGATATGA+AGG | - | chr5_3:34375492-34375511 | Msa0808930:intron | 35.0% | |
TGGAAGATATGAAGGTGATT+GGG | - | chr5_3:34375500-34375519 | Msa0808930:intron | 35.0% | |
!! | TGGGTTGATGGAAAATATGA+TGG | - | chr5_3:34375519-34375538 | Msa0808930:intron | 35.0% |
ATGGTTATGGAATTGAAAGC+TGG | - | chr5_3:34375538-34375557 | Msa0808930:intron | 35.0% | |
TGGTTATGGAATTGAAAGCT+GGG | - | chr5_3:34375539-34375558 | Msa0808930:intron | 35.0% | |
AGACATGGTTATGGTGTTTA+TGG | - | chr5_3:34375603-34375622 | Msa0808930:CDS | 35.0% | |
! | GTGATTGTTATTCTGGTGAA+TGG | - | chr5_3:34375637-34375656 | Msa0808930:CDS | 35.0% |
! | TGGTTTAATGGACAAAGTCA+TGG | - | chr5_3:34375657-34375676 | Msa0808930:CDS | 35.0% |
! | AATGGACAAAGTCATGGTTT+TGG | - | chr5_3:34375663-34375682 | Msa0808930:CDS | 35.0% |
TCTGATGGAAGTTGTTATGT+TGG | - | chr5_3:34375699-34375718 | Msa0808930:CDS | 35.0% | |
!! | TTTGGTTCTAAACATGGTCT+TGG | - | chr5_3:34375732-34375751 | Msa0808930:CDS | 35.0% |
! | GTCTTGGTTGTTACCATTTT+AGG | - | chr5_3:34375748-34375767 | Msa0808930:CDS | 35.0% |
ACACGATTGAAGATTCAAAC+TGG | + | chr5_3:34377364-34377383 | None:intergenic | 35.0% | |
AAAGCTGTTCAGGATAGAAT+GGG | - | chr5_3:34377543-34377562 | Msa0808930:CDS | 35.0% | |
GAATCTACAATTCGAAGCAA+AGG | + | chr5_3:34377628-34377647 | None:intergenic | 35.0% | |
! | CTTCACAAAGTAACTTGTAC+AGG | - | chr5_3:34377741-34377760 | Msa0808930:five_prime_UTR | 35.0% |
! | GAAATGGGCTTCAATGAAAT+TGG | - | chr5_3:34377804-34377823 | Msa0808930:five_prime_UTR | 35.0% |
! | TGATTTTTCCAAGTGAAGCT+AGG | + | chr5_3:34377902-34377921 | None:intergenic | 35.0% |
AATGCAAGTGGGGTTGAATA+GGG | + | chr5_3:34374416-34374435 | None:intergenic | 40.0% | |
AGAAGGTAAGAATGCAAGTG+GGG | + | chr5_3:34374426-34374445 | None:intergenic | 40.0% | |
GAGAAGGTAAGAATGCAAGT+GGG | + | chr5_3:34374427-34374446 | None:intergenic | 40.0% | |
TGAGAAGGTAAGAATGCAAG+TGG | + | chr5_3:34374428-34374447 | None:intergenic | 40.0% | |
GTTTCGCAGTTTACGATGAA+AGG | + | chr5_3:34374524-34374543 | None:intergenic | 40.0% | |
GTGGTTGTTGTAATCTTCGT+TGG | + | chr5_3:34374593-34374612 | None:intergenic | 40.0% | |
GCAGAACCGGTAAAAATAAC+CGG | + | chr5_3:34374654-34374673 | None:intergenic | 40.0% | |
! | AAGCAAAGAGGATTTGGTTC+GGG | + | chr5_3:34374872-34374891 | None:intergenic | 40.0% |
! | GAAGCAAAGAGGATTTGGTT+CGG | + | chr5_3:34374873-34374892 | None:intergenic | 40.0% |
GAACCAAATCCTCTTTGCTT+CGG | - | chr5_3:34374872-34374891 | Msa0808930:exon | 40.0% | |
! | TCTCATTCTCGTTCAAGTTC+GGG | - | chr5_3:34375030-34375049 | Msa0808930:CDS | 40.0% |
! | AGCAACACATTTTCGGAAGT+GGG | + | chr5_3:34375168-34375187 | None:intergenic | 40.0% |
! | GACGGGAATTTAAAACGACT+CGG | - | chr5_3:34375279-34375298 | Msa0808930:intron | 40.0% |
!! | AACCGGTTTTTCACTTCCTT+TGG | + | chr5_3:34375313-34375332 | None:intergenic | 40.0% |
! | GAAGTGAAAAACCGGTTCAA+TGG | - | chr5_3:34375316-34375335 | Msa0808930:intron | 40.0% |
! | AAACCGGTTCAATGGTTCAT+AGG | - | chr5_3:34375324-34375343 | Msa0808930:intron | 40.0% |
TCTCCTATGAACCATTGAAC+CGG | + | chr5_3:34375330-34375349 | None:intergenic | 40.0% | |
!! | CGTGAAAGTGTTGTTGAAAG+AGG | - | chr5_3:34375380-34375399 | Msa0808930:intron | 40.0% |
AGCAATGGTGATTTCTACGA+AGG | - | chr5_3:34375423-34375442 | Msa0808930:intron | 40.0% | |
TACGAAGGAGAATTTCATGG+TGG | - | chr5_3:34375438-34375457 | Msa0808930:intron | 40.0% | |
GTGGAAGATATGAAGGTGAT+TGG | - | chr5_3:34375499-34375518 | Msa0808930:intron | 40.0% | |
!! | TATGAAGGTGATTGGGTTGA+TGG | - | chr5_3:34375507-34375526 | Msa0808930:intron | 40.0% |
GCTAGGGGAAGTAGATATAA+GGG | - | chr5_3:34375561-34375580 | Msa0808930:intron | 40.0% | |
! | CAAGGTTTGAGACATGGTTA+TGG | - | chr5_3:34375594-34375613 | Msa0808930:intron | 40.0% |
GGTGTTCAATCTTGTTCTGA+TGG | - | chr5_3:34375684-34375703 | Msa0808930:CDS | 40.0% | |
TGGGCACAAACTATGAAGTA+CGG | - | chr5_3:34375814-34375833 | Msa0808930:intron | 40.0% | |
! | TCTAAGATTACTGGCAGTGT+CGG | + | chr5_3:34375873-34375892 | None:intergenic | 40.0% |
AATTTGTGCCCTATGAAGCA+CGG | + | chr5_3:34375983-34376002 | None:intergenic | 40.0% | |
TATATAGGAAGCTAGGGTAG+TGG | - | chr5_3:34376557-34376576 | Msa0808930:intron | 40.0% | |
GGAGACAAAATGCATGGATT+TGG | - | chr5_3:34376690-34376709 | Msa0808930:intron | 40.0% | |
AACAGTGTCCATTCGCAAAA+TGG | + | chr5_3:34376722-34376741 | None:intergenic | 40.0% | |
CAAATACCTGAGCTGATGTA+AGG | + | chr5_3:34376875-34376894 | None:intergenic | 40.0% | |
! | GATAAGTTTTACAGACACGG+AGG | + | chr5_3:34377004-34377023 | None:intergenic | 40.0% |
TTCCATGAGTTGCTACAGTT+TGG | + | chr5_3:34377069-34377088 | None:intergenic | 40.0% | |
ACGCTAACAGAATACCATTC+AGG | + | chr5_3:34377098-34377117 | None:intergenic | 40.0% | |
TTTAATGGTTCTCGTACCTG+TGG | - | chr5_3:34377161-34377180 | Msa0808930:CDS | 40.0% | |
TTAATGGTTCTCGTACCTGT+GGG | - | chr5_3:34377162-34377181 | Msa0808930:CDS | 40.0% | |
TTGGTACTGTCATAGCTCTT+TGG | - | chr5_3:34377266-34377285 | Msa0808930:CDS | 40.0% | |
ACTGTCATAGCTCTTTGGTT+CGG | - | chr5_3:34377271-34377290 | Msa0808930:CDS | 40.0% | |
AAAATGCGATAAACCATCCC+CGG | - | chr5_3:34377448-34377467 | Msa0808930:CDS | 40.0% | |
GAAAGCTGTTCAGGATAGAA+TGG | - | chr5_3:34377542-34377561 | Msa0808930:CDS | 40.0% | |
!!! | GTAAGCTTTTTTGCTCACCA+GGG | + | chr5_3:34377686-34377705 | None:intergenic | 40.0% |
TGGTGAGCAAAAAAGCTTAC+CGG | - | chr5_3:34377686-34377705 | Msa0808930:five_prime_UTR | 40.0% | |
TAATACTCTTCAACCTCCTC+CGG | + | chr5_3:34377708-34377727 | None:intergenic | 40.0% | |
TCTGTGCCATCCGATTAAAT+CGG | - | chr5_3:34377944-34377963 | Msa0808930:five_prime_UTR | 40.0% | |
AGGAGTCATCCCGATTTAAT+CGG | + | chr5_3:34377957-34377976 | None:intergenic | 40.0% | |
TAAGATTTGCATCTCGAACC+AGG | + | chr5_3:34377977-34377996 | None:intergenic | 40.0% | |
AACGACTCACGATGAAAAGT+TGG | + | chr5_3:34378010-34378029 | None:intergenic | 40.0% | |
GAATGCAAGTGGGGTTGAAT+AGG | + | chr5_3:34374417-34374436 | None:intergenic | 45.0% | |
! | ACCACCACGGTTTTTATCAC+CGG | + | chr5_3:34374709-34374728 | None:intergenic | 45.0% |
TGGTGACAATCTCACGATAC+AGG | - | chr5_3:34374725-34374744 | Msa0808930:three_prime_UTR | 45.0% | |
GAGAAGAGAAAATCGTACGG+TGG | - | chr5_3:34374775-34374794 | Msa0808930:three_prime_UTR | 45.0% | |
! | TGGTTCGGGTGAGTTTAGTT+TGG | + | chr5_3:34374858-34374877 | None:intergenic | 45.0% |
ACACCGAAGCAAAGAGGATT+TGG | + | chr5_3:34374878-34374897 | None:intergenic | 45.0% | |
AGAAGAACACCGAAGCAAAG+AGG | + | chr5_3:34374884-34374903 | None:intergenic | 45.0% | |
AACGAGAATGAGAACCGAAC+CGG | + | chr5_3:34375023-34375042 | None:intergenic | 45.0% | |
! | TCTCGTTCAAGTTCGGGTTA+TGG | - | chr5_3:34375036-34375055 | Msa0808930:intron | 45.0% |
! | CAGCAACACATTTTCGGAAG+TGG | + | chr5_3:34375169-34375188 | None:intergenic | 45.0% |
!!! | CGACTCGGTTTTTCTTCCAA+AGG | - | chr5_3:34375294-34375313 | Msa0808930:intron | 45.0% |
CAATGGTTCATAGGAGAACC+CGG | - | chr5_3:34375333-34375352 | Msa0808930:intron | 45.0% | |
! | GGTGGAAAGTGTAATGGAAG+TGG | - | chr5_3:34375456-34375475 | Msa0808930:intron | 45.0% |
ATGGAATTGAAAGCTGGGCT+AGG | - | chr5_3:34375544-34375563 | Msa0808930:intron | 45.0% | |
TGGAATTGAAAGCTGGGCTA+GGG | - | chr5_3:34375545-34375564 | Msa0808930:intron | 45.0% | |
GGCTAGGGGAAGTAGATATA+AGG | - | chr5_3:34375560-34375579 | Msa0808930:intron | 45.0% | |
TCTGTGTTAGTGTTGTGTGC+CGG | - | chr5_3:34375911-34375930 | Msa0808930:intron | 45.0% | |
GATTATGCATGTCCTGGTGT+TGG | + | chr5_3:34375950-34375969 | None:intergenic | 45.0% | |
GTTCGTCTCATACTGAGTCA+AGG | + | chr5_3:34376009-34376028 | None:intergenic | 45.0% | |
AGTGGACCCTAGACTATAGT+TGG | - | chr5_3:34376575-34376594 | Msa0808930:intron | 45.0% | |
! | GGAGTCTACCATTTTGCGAA+TGG | - | chr5_3:34376711-34376730 | Msa0808930:intron | 45.0% |
GCGAATGGACACTGTTATGA+AGG | - | chr5_3:34376726-34376745 | Msa0808930:CDS | 45.0% | |
GACACTGTTATGAAGGAGCA+TGG | - | chr5_3:34376733-34376752 | Msa0808930:CDS | 45.0% | |
! | TATGAAGGAGCATGGCATGA+AGG | - | chr5_3:34376741-34376760 | Msa0808930:CDS | 45.0% |
AGACCGAAGATGTGGTGAAT+GGG | - | chr5_3:34376803-34376822 | Msa0808930:CDS | 45.0% | |
TGTCCCATTCACCACATCTT+CGG | + | chr5_3:34376809-34376828 | None:intergenic | 45.0% | |
AGATGTGGTGAATGGGACAA+TGG | - | chr5_3:34376810-34376829 | Msa0808930:CDS | 45.0% | |
GACCAAACTGTAGCAACTCA+TGG | - | chr5_3:34377064-34377083 | Msa0808930:CDS | 45.0% | |
!! | ATAGCTCTTTGGTTCGGTAC+TGG | - | chr5_3:34377277-34377296 | Msa0808930:CDS | 45.0% |
TGGTTAAATTGCAGGCTGCT+AGG | - | chr5_3:34377415-34377434 | Msa0808930:CDS | 45.0% | |
TCTCCACTTGGTCATCATTC+CGG | + | chr5_3:34377470-34377489 | None:intergenic | 45.0% | |
CCATTACTGCTTTCTCCACT+TGG | + | chr5_3:34377482-34377501 | None:intergenic | 45.0% | |
CCAAGTGGAGAAAGCAGTAA+TGG | - | chr5_3:34377479-34377498 | Msa0808930:CDS | 45.0% | |
AAGCAGTAATGGCAGCAAAC+AGG | - | chr5_3:34377490-34377509 | Msa0808930:CDS | 45.0% | |
AGCAGTAATGGCAGCAAACA+GGG | - | chr5_3:34377491-34377510 | Msa0808930:CDS | 45.0% | |
!!! | GGTAAGCTTTTTTGCTCACC+AGG | + | chr5_3:34377687-34377706 | None:intergenic | 45.0% |
TGAGCAAAAAAGCTTACCGG+AGG | - | chr5_3:34377689-34377708 | Msa0808930:five_prime_UTR | 45.0% | |
CTACTCATCCTAGCTTCACT+TGG | - | chr5_3:34377891-34377910 | Msa0808930:five_prime_UTR | 45.0% | |
CTGTGCCATCCGATTAAATC+GGG | - | chr5_3:34377945-34377964 | Msa0808930:five_prime_UTR | 45.0% | |
GTCATCCCGATTTAATCGGA+TGG | + | chr5_3:34377953-34377972 | None:intergenic | 45.0% | |
GATTAAATCGGGATGACTCC+TGG | - | chr5_3:34377956-34377975 | Msa0808930:five_prime_UTR | 45.0% | |
!! | GTTGAATAGGGAGCGTTGGA+TGG | + | chr5_3:34374404-34374423 | None:intergenic | 50.0% |
TGAAATGTTACCGGCGCAAC+CGG | - | chr5_3:34374687-34374706 | Msa0808930:three_prime_UTR | 50.0% | |
!! | GTTTTTATCACCGGTTGCGC+CGG | + | chr5_3:34374700-34374719 | None:intergenic | 50.0% |
GCAACCGGTGATAAAAACCG+TGG | - | chr5_3:34374702-34374721 | Msa0808930:three_prime_UTR | 50.0% | |
ACCGGTGATAAAAACCGTGG+TGG | - | chr5_3:34374705-34374724 | Msa0808930:three_prime_UTR | 50.0% | |
TCGTGAGATTGTCACCACCA+CGG | + | chr5_3:34374722-34374741 | None:intergenic | 50.0% | |
CGTACGGTGGAGATTGAATC+TGG | - | chr5_3:34374788-34374807 | Msa0808930:three_prime_UTR | 50.0% | |
ACGGTGGAGATTGAATCTGG+TGG | - | chr5_3:34374791-34374810 | Msa0808930:three_prime_UTR | 50.0% | |
CGGTGGAGATTGAATCTGGT+GGG | - | chr5_3:34374792-34374811 | Msa0808930:three_prime_UTR | 50.0% | |
CTGGTGGGACCCAATAAACA+TGG | - | chr5_3:34374807-34374826 | Msa0808930:three_prime_UTR | 50.0% | |
CTTCTTCGTTGACGGAACCT+AGG | + | chr5_3:34374933-34374952 | None:intergenic | 50.0% | |
ACGAGAATGAGAACCGAACC+GGG | + | chr5_3:34375022-34375041 | None:intergenic | 50.0% | |
! | GTTCGGGTTATGGTTCAACC+CGG | - | chr5_3:34375046-34375065 | Msa0808930:intron | 50.0% |
!! | ACTACTGCTGCACCGATTCT+AGG | - | chr5_3:34375078-34375097 | Msa0808930:intron | 50.0% |
TTCGTTCTCCTCTGCTGAAC+CGG | + | chr5_3:34375355-34375374 | None:intergenic | 50.0% | |
! | GGAATTGAAAGCTGGGCTAG+GGG | - | chr5_3:34375546-34375565 | Msa0808930:intron | 50.0% |
TGTTGGACATGTGTCGTGTC+CGG | + | chr5_3:34375933-34375952 | None:intergenic | 50.0% | |
ACCAGGACATGCATAATCCG+AGG | - | chr5_3:34375952-34375971 | Msa0808930:intron | 50.0% | |
TCCTCGGATTATGCATGTCC+TGG | + | chr5_3:34375956-34375975 | None:intergenic | 50.0% | |
TATGAAGCACGGACACTCCT+CGG | + | chr5_3:34375972-34375991 | None:intergenic | 50.0% | |
!! | AGGAGTGTCCGTGCTTCATA+GGG | - | chr5_3:34375972-34375991 | Msa0808930:intron | 50.0% |
GAAGGTCGTCGACAAGGTTA+TGG | - | chr5_3:34376759-34376778 | Msa0808930:CDS | 50.0% | |
CGAAATGGAGACCGAAGATG+TGG | - | chr5_3:34376795-34376814 | Msa0808930:CDS | 50.0% | |
GAGACCGAAGATGTGGTGAA+TGG | - | chr5_3:34376802-34376821 | Msa0808930:CDS | 50.0% | |
GTAAGGACAGCCAGTGTTTG+TGG | + | chr5_3:34376858-34376877 | None:intergenic | 50.0% | |
TCCACTTGGTCATCATTCCG+GGG | + | chr5_3:34377468-34377487 | None:intergenic | 50.0% | |
CTCCACTTGGTCATCATTCC+GGG | + | chr5_3:34377469-34377488 | None:intergenic | 50.0% | |
AGCTTTCACTGCTGCAACTC+TGG | + | chr5_3:34377529-34377548 | None:intergenic | 50.0% | |
TGCAGCAGTGAAAGCTGTTC+AGG | - | chr5_3:34377533-34377552 | Msa0808930:CDS | 50.0% | |
GCTGTTCAGGATAGAATGGG+TGG | - | chr5_3:34377546-34377565 | Msa0808930:CDS | 50.0% | |
!!! | AGCTTTTTTGCTCACCAGGG+TGG | + | chr5_3:34377683-34377702 | None:intergenic | 50.0% |
GCAAAAAAGCTTACCGGAGG+AGG | - | chr5_3:34377692-34377711 | Msa0808930:five_prime_UTR | 50.0% | |
! | TGGGGTTGAATAGGGAGCGT+TGG | + | chr5_3:34374408-34374427 | None:intergenic | 55.0% |
GACTATACACGGCGCAGAAC+CGG | + | chr5_3:34374667-34374686 | None:intergenic | 55.0% | |
TAGGCTCGGAATGGAGGATC+GGG | + | chr5_3:34374914-34374933 | None:intergenic | 55.0% | |
CTAGGCTCGGAATGGAGGAT+CGG | + | chr5_3:34374915-34374934 | None:intergenic | 55.0% | |
TCGTTGACGGAACCTAGGCT+CGG | + | chr5_3:34374928-34374947 | None:intergenic | 55.0% | |
TGGGTCCCACTGAACCGATA+TGG | + | chr5_3:34375149-34375168 | None:intergenic | 55.0% | |
TCGTTCTCCTCTGCTGAACC+GGG | + | chr5_3:34375354-34375373 | None:intergenic | 55.0% | |
AGTACGGATACAGACACGCC+CGG | - | chr5_3:34375830-34375849 | Msa0808930:intron | 55.0% | |
CACGACACATGTCCAACACC+AGG | - | chr5_3:34375935-34375954 | Msa0808930:intron | 55.0% | |
!! | GAGGAGTGTCCGTGCTTCAT+AGG | - | chr5_3:34375971-34375990 | Msa0808930:intron | 55.0% |
TGGCATGAAGGTCGTCGACA+AGG | - | chr5_3:34376753-34376772 | Msa0808930:CDS | 55.0% | |
AGGACAGCCAGTGTTTGTGG+CGG | + | chr5_3:34376855-34376874 | None:intergenic | 55.0% | |
GGCTGTCCTTACATCAGCTC+AGG | - | chr5_3:34376866-34376885 | Msa0808930:CDS | 55.0% | |
CTTGGTCATCATTCCGGGGA+TGG | + | chr5_3:34377464-34377483 | None:intergenic | 55.0% | |
TCCCCGGAATGATGACCAAG+TGG | - | chr5_3:34377464-34377483 | Msa0808930:CDS | 55.0% | |
TGCTGCAACTCTGGCAGCAA+TGG | + | chr5_3:34377520-34377539 | None:intergenic | 55.0% | |
ATTTGGAAGATGCGCCACCC+TGG | - | chr5_3:34377666-34377685 | Msa0808930:five_prime_UTR | 55.0% | |
GGAATGGAGGATCGGGTGGT+TGG | + | chr5_3:34374907-34374926 | None:intergenic | 60.0% | |
CGATCCTCCATTCCGAGCCT+AGG | - | chr5_3:34374913-34374932 | Msa0808930:CDS | 60.0% | |
GGAACCTAGGCTCGGAATGG+AGG | + | chr5_3:34374920-34374939 | None:intergenic | 60.0% | |
GACGGAACCTAGGCTCGGAA+TGG | + | chr5_3:34374923-34374942 | None:intergenic | 60.0% | |
AGGAGAACCCGGTTCAGCAG+AGG | - | chr5_3:34375344-34375363 | Msa0808930:intron | 60.0% | |
GCGTGTCAGTGTCAGTGTCC+GGG | + | chr5_3:34375851-34375870 | None:intergenic | 60.0% | |
GGCGTGTCAGTGTCAGTGTC+CGG | + | chr5_3:34375852-34375871 | None:intergenic | 60.0% | |
CTCTCTGCCGCCACAAACAC+TGG | - | chr5_3:34376845-34376864 | Msa0808930:CDS | 60.0% | |
GCTCGGAATGGAGGATCGGG+TGG | + | chr5_3:34374911-34374930 | None:intergenic | 65.0% | |
!! | GTGGCGGCAGAGAGTGCTTG+AGG | + | chr5_3:34376839-34376858 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_3 | gene | 34374394 | 34378088 | 34374394 | ID=Msa0808930;Name=Msa0808930 |
chr5_3 | mRNA | 34374394 | 34378088 | 34374394 | ID=Msa0808930-mRNA-1;Parent=Msa0808930;Name=Msa0808930-mRNA-1;_AED=0.01;_eAED=0.01;_QI=432|1|1|1|1|1|3|495|445 |
chr5_3 | exon | 34374394 | 34375053 | 34374394 | ID=Msa0808930-mRNA-1:exon:10969;Parent=Msa0808930-mRNA-1 |
chr5_3 | exon | 34375595 | 34375823 | 34375595 | ID=Msa0808930-mRNA-1:exon:10968;Parent=Msa0808930-mRNA-1 |
chr5_3 | exon | 34376713 | 34378088 | 34376713 | ID=Msa0808930-mRNA-1:exon:10967;Parent=Msa0808930-mRNA-1 |
chr5_3 | five_prime_UTR | 34377657 | 34378088 | 34377657 | ID=Msa0808930-mRNA-1:five_prime_utr;Parent=Msa0808930-mRNA-1 |
chr5_3 | CDS | 34376713 | 34377656 | 34376713 | ID=Msa0808930-mRNA-1:cds;Parent=Msa0808930-mRNA-1 |
chr5_3 | CDS | 34375595 | 34375823 | 34375595 | ID=Msa0808930-mRNA-1:cds;Parent=Msa0808930-mRNA-1 |
chr5_3 | CDS | 34374889 | 34375053 | 34374889 | ID=Msa0808930-mRNA-1:cds;Parent=Msa0808930-mRNA-1 |
chr5_3 | three_prime_UTR | 34374394 | 34374888 | 34374394 | ID=Msa0808930-mRNA-1:three_prime_utr;Parent=Msa0808930-mRNA-1 |
Gene Sequence |
Protein sequence |