Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1230830 | XP_003627298.1 | 94.944 | 178 | 9 | 0 | 1 | 178 | 449 | 626 | 9.65e-121 | 371 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1230830 | sp|Q9M5P5|RSH3L_ARATH | 73.596 | 178 | 44 | 1 | 1 | 178 | 438 | 612 | 2.83e-90 | 285 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0029850 | Msa1230830 | 0.833059 | 6.628057e-56 | -8.615850e-47 |
| Msa0037880 | Msa1230830 | 0.800984 | 1.115346e-48 | -8.615850e-47 |
| Msa0038020 | Msa1230830 | 0.807126 | 5.887225e-50 | -8.615850e-47 |
| Msa0051200 | Msa1230830 | 0.814851 | 1.248096e-51 | -8.615850e-47 |
| Msa0051460 | Msa1230830 | 0.825830 | 3.785138e-54 | -8.615850e-47 |
| Msa0052030 | Msa1230830 | 0.807093 | 5.981954e-50 | -8.615850e-47 |
| Msa0055240 | Msa1230830 | 0.814816 | 1.270765e-51 | -8.615850e-47 |
| Msa0057520 | Msa1230830 | 0.814044 | 1.882050e-51 | -8.615850e-47 |
| Msa0071550 | Msa1230830 | 0.810458 | 1.141233e-50 | -8.615850e-47 |
| Msa0077180 | Msa1230830 | 0.819614 | 1.058682e-52 | -8.615850e-47 |
| Msa0085720 | Msa1230830 | 0.848576 | 5.611577e-60 | -8.615850e-47 |
| Msa0102120 | Msa1230830 | 0.856993 | 2.209156e-62 | -8.615850e-47 |
| Msa0117770 | Msa1230830 | 0.806648 | 7.427608e-50 | -8.615850e-47 |
| Msa0120340 | Msa1230830 | 0.806964 | 6.369102e-50 | -8.615850e-47 |
| Msa0607540 | Msa1230830 | 0.817674 | 2.918145e-52 | -8.615850e-47 |
| Msa0608710 | Msa1230830 | 0.806911 | 6.534526e-50 | -8.615850e-47 |
| Msa0610590 | Msa1230830 | 0.804673 | 1.929295e-49 | -8.615850e-47 |
| Msa0615340 | Msa1230830 | 0.833068 | 6.595507e-56 | -8.615850e-47 |
| Msa0621750 | Msa1230830 | -0.827609 | 1.423158e-54 | -8.615850e-47 |
| Msa0622600 | Msa1230830 | 0.802408 | 5.691646e-49 | -8.615850e-47 |
| Msa0624230 | Msa1230830 | 0.801818 | 7.524228e-49 | -8.615850e-47 |
| Msa0626990 | Msa1230830 | 0.849541 | 3.026415e-60 | -8.615850e-47 |
| Msa0627350 | Msa1230830 | 0.855772 | 5.042394e-62 | -8.615850e-47 |
| Msa0647830 | Msa1230830 | 0.823473 | 1.359051e-53 | -8.615850e-47 |
| Msa0649130 | Msa1230830 | 0.804970 | 1.672831e-49 | -8.615850e-47 |
| Msa0651190 | Msa1230830 | 0.804248 | 2.366694e-49 | -8.615850e-47 |
| Msa0651270 | Msa1230830 | 0.800629 | 1.317654e-48 | -8.615850e-47 |
| Msa0660300 | Msa1230830 | 0.818614 | 1.787809e-52 | -8.615850e-47 |
| Msa0678820 | Msa1230830 | 0.818437 | 1.961157e-52 | -8.615850e-47 |
| Msa0679550 | Msa1230830 | 0.832788 | 7.740753e-56 | -8.615850e-47 |
| Msa0688070 | Msa1230830 | 0.811250 | 7.689795e-51 | -8.615850e-47 |
| Msa0690440 | Msa1230830 | 0.821813 | 3.306965e-53 | -8.615850e-47 |
| Msa0698360 | Msa1230830 | 0.814684 | 1.359276e-51 | -8.615850e-47 |
| Msa0712080 | Msa1230830 | 0.819514 | 1.115888e-52 | -8.615850e-47 |
| Msa0724560 | Msa1230830 | 0.811201 | 7.880782e-51 | -8.615850e-47 |
| Msa0724950 | Msa1230830 | 0.812537 | 4.032677e-51 | -8.615850e-47 |
| Msa0731180 | Msa1230830 | 0.830680 | 2.562927e-55 | -8.615850e-47 |
| Msa0744170 | Msa1230830 | -0.808110 | 3.637318e-50 | -8.615850e-47 |
| Msa0749930 | Msa1230830 | 0.838670 | 2.505266e-57 | -8.615850e-47 |
| Msa0751210 | Msa1230830 | 0.825942 | 3.560131e-54 | -8.615850e-47 |
| Msa0763080 | Msa1230830 | 0.824294 | 8.724097e-54 | -8.615850e-47 |
| Msa0788070 | Msa1230830 | -0.803867 | 2.839548e-49 | -8.615850e-47 |
| Msa0794320 | Msa1230830 | 0.801255 | 9.817613e-49 | -8.615850e-47 |
| Msa0798860 | Msa1230830 | 0.804803 | 1.812642e-49 | -8.615850e-47 |
| Msa0801740 | Msa1230830 | 0.863491 | 2.396550e-64 | -8.615850e-47 |
| Msa0803590 | Msa1230830 | 0.821798 | 3.333970e-53 | -8.615850e-47 |
| Msa0805420 | Msa1230830 | 0.823961 | 1.044639e-53 | -8.615850e-47 |
| Msa0806200 | Msa1230830 | 0.823860 | 1.103094e-53 | -8.615850e-47 |
| Msa0807030 | Msa1230830 | 0.813473 | 2.515038e-51 | -8.615850e-47 |
| Msa0807050 | Msa1230830 | 0.839778 | 1.292539e-57 | -8.615850e-47 |
| Msa0808930 | Msa1230830 | 0.802855 | 4.602654e-49 | -8.615850e-47 |
| Msa0818110 | Msa1230830 | 0.814772 | 1.299333e-51 | -8.615850e-47 |
| Msa0830420 | Msa1230830 | 0.833493 | 5.166252e-56 | -8.615850e-47 |
| Msa0831150 | Msa1230830 | 0.814306 | 1.647962e-51 | -8.615850e-47 |
| Msa0831590 | Msa1230830 | 0.824759 | 6.781420e-54 | -8.615850e-47 |
| Msa0832990 | Msa1230830 | 0.839811 | 1.267412e-57 | -8.615850e-47 |
| Msa0124550 | Msa1230830 | 0.802000 | 6.905695e-49 | -8.615850e-47 |
| Msa0125050 | Msa1230830 | 0.811352 | 7.308490e-51 | -8.615850e-47 |
| Msa0143920 | Msa1230830 | 0.811178 | 7.970503e-51 | -8.615850e-47 |
| Msa0169820 | Msa1230830 | 0.834471 | 2.940859e-56 | -8.615850e-47 |
| Msa0174850 | Msa1230830 | 0.820012 | 8.586357e-53 | -8.615850e-47 |
| Msa0175050 | Msa1230830 | 0.868305 | 7.209727e-66 | -8.615850e-47 |
| Msa0178860 | Msa1230830 | -0.823029 | 1.726046e-53 | -8.615850e-47 |
| Msa0187060 | Msa1230830 | 0.827915 | 1.201441e-54 | -8.615850e-47 |
| Msa0199800 | Msa1230830 | -0.821141 | 4.728030e-53 | -8.615850e-47 |
| Msa0222340 | Msa1230830 | 0.822704 | 2.054682e-53 | -8.615850e-47 |
| Msa1230830 | Msa1233500 | 0.803929 | 2.757322e-49 | -8.615850e-47 |
| Msa1230830 | Msa1235400 | 0.923336 | 3.038978e-89 | -8.615850e-47 |
| Msa1230830 | Msa1241570 | 0.802458 | 5.557220e-49 | -8.615850e-47 |
| Msa1230830 | Msa1244200 | 0.805403 | 1.357907e-49 | -8.615850e-47 |
| Msa1230830 | Msa1257600 | 0.807233 | 5.586086e-50 | -8.615850e-47 |
| Msa1230830 | Msa1258380 | -0.827131 | 1.853449e-54 | -8.615850e-47 |
| Msa1230830 | Msa1270730 | 0.814203 | 1.736133e-51 | -8.615850e-47 |
| Msa1230830 | Msa1276440 | 0.810100 | 1.363101e-50 | -8.615850e-47 |
| Msa1230830 | Msa1276510 | 0.907725 | 3.716033e-81 | -8.615850e-47 |
| Msa1230830 | Msa1279210 | 0.815122 | 1.086847e-51 | -8.615850e-47 |
| Msa1230830 | Msa1306750 | 0.824550 | 7.595838e-54 | -8.615850e-47 |
| Msa1230830 | Msa1307740 | 0.853387 | 2.471881e-61 | -8.615850e-47 |
| Msa1230830 | Msa1314770 | 0.917922 | 2.937279e-86 | -8.615850e-47 |
| Msa1230830 | Msa1322200 | 0.811592 | 6.481080e-51 | -8.615850e-47 |
| Msa1230830 | Msa1373350 | 0.845345 | 4.303589e-59 | -8.615850e-47 |
| Msa1230830 | Msa1376160 | -0.809040 | 2.303060e-50 | -8.615850e-47 |
| Msa1230830 | Msa1376930 | 0.810151 | 1.329442e-50 | -8.615850e-47 |
| Msa1230830 | Msa1377070 | 0.817798 | 2.735247e-52 | -8.615850e-47 |
| Msa1230830 | Msa1378230 | 0.996980 | 4.833522e-235 | -8.615850e-47 |
| Msa1230830 | Msa1382930 | 0.810768 | 9.779520e-51 | -8.615850e-47 |
| Msa1230830 | Msa1393040 | 0.826477 | 2.655246e-54 | -8.615850e-47 |
| Msa1230830 | Msa1404240 | -0.803288 | 3.744642e-49 | -8.615850e-47 |
| Msa1230830 | Msa1407600 | 0.820779 | 5.728705e-53 | -8.615850e-47 |
| Msa1230830 | Msa1407650 | 0.826075 | 3.309340e-54 | -8.615850e-47 |
| Msa1230830 | Msa1437680 | 0.839675 | 1.374913e-57 | -8.615850e-47 |
| Msa1230830 | Msa1438910 | 0.807251 | 5.537982e-50 | -8.615850e-47 |
| Msa1230830 | Msa1444250 | -0.830635 | 2.628894e-55 | -8.615850e-47 |
| Msa1230830 | Msa1444740 | 0.815030 | 1.139144e-51 | -8.615850e-47 |
| Msa1230830 | Msa1445030 | 0.837723 | 4.393371e-57 | -8.615850e-47 |
| Msa1230830 | Msa1447150 | 0.814292 | 1.659619e-51 | -8.615850e-47 |
| Msa1230830 | Msa1451620 | -0.837006 | 6.703680e-57 | -8.615850e-47 |
| Msa1230830 | Msa1454860 | 0.813537 | 2.433952e-51 | -8.615850e-47 |
| Msa1230830 | Msa1458550 | 0.801154 | 1.029164e-48 | -8.615850e-47 |
| Msa1230830 | Msa1461810 | -0.819298 | 1.249835e-52 | -8.615850e-47 |
| Msa0365490 | Msa1230830 | 0.835625 | 1.505060e-56 | -8.615850e-47 |
| Msa0376590 | Msa1230830 | 0.827833 | 1.257305e-54 | -8.615850e-47 |
| Msa0379640 | Msa1230830 | 0.836021 | 1.194204e-56 | -8.615850e-47 |
| Msa0381600 | Msa1230830 | -0.802594 | 5.209739e-49 | -8.615850e-47 |
| Msa0388840 | Msa1230830 | 0.810731 | 9.961238e-51 | -8.615850e-47 |
| Msa0389810 | Msa1230830 | 0.852644 | 4.032309e-61 | -8.615850e-47 |
| Msa0390960 | Msa1230830 | 0.800465 | 1.422737e-48 | -8.615850e-47 |
| Msa0394340 | Msa1230830 | 0.816789 | 4.613177e-52 | -8.615850e-47 |
| Msa0409200 | Msa1230830 | 0.826905 | 2.098461e-54 | -8.615850e-47 |
| Msa0428930 | Msa1230830 | 0.801807 | 7.562892e-49 | -8.615850e-47 |
| Msa0433530 | Msa1230830 | 0.800329 | 1.516448e-48 | -8.615850e-47 |
| Msa0438050 | Msa1230830 | 0.836380 | 9.680104e-57 | -8.615850e-47 |
| Msa0442200 | Msa1230830 | 0.804408 | 2.191913e-49 | -8.615850e-47 |
| Msa0444090 | Msa1230830 | 0.806448 | 8.187230e-50 | -8.615850e-47 |
| Msa0458440 | Msa1230830 | 0.831471 | 1.638520e-55 | -8.615850e-47 |
| Msa0464420 | Msa1230830 | 0.801834 | 7.467580e-49 | -8.615850e-47 |
| Msa0464900 | Msa1230830 | 0.852460 | 4.551191e-61 | -8.615850e-47 |
| Msa0465680 | Msa1230830 | -0.807370 | 5.225671e-50 | -8.615850e-47 |
| Msa0468130 | Msa1230830 | 0.841085 | 5.884328e-58 | -8.615850e-47 |
| Msa0469940 | Msa1230830 | -0.801414 | 9.107037e-49 | -8.615850e-47 |
| Msa0475490 | Msa1230830 | 0.849023 | 4.219799e-60 | -8.615850e-47 |
| Msa0477130 | Msa1230830 | -0.821802 | 3.326574e-53 | -8.615850e-47 |
| Msa0482190 | Msa1230830 | -0.827355 | 1.637887e-54 | -8.615850e-47 |
| Msa0981310 | Msa1230830 | 0.803401 | 3.547579e-49 | -8.615850e-47 |
| Msa0982240 | Msa1230830 | 0.818205 | 2.213400e-52 | -8.615850e-47 |
| Msa0982270 | Msa1230830 | 0.849897 | 2.406905e-60 | -8.615850e-47 |
| Msa0999040 | Msa1230830 | 0.801034 | 1.089258e-48 | -8.615850e-47 |
| Msa1002480 | Msa1230830 | 0.818576 | 1.823845e-52 | -8.615850e-47 |
| Msa1005410 | Msa1230830 | 0.807628 | 4.606356e-50 | -8.615850e-47 |
| Msa1006850 | Msa1230830 | 0.802035 | 6.791262e-49 | -8.615850e-47 |
| Msa1031770 | Msa1230830 | 0.807162 | 5.783314e-50 | -8.615850e-47 |
| Msa1031810 | Msa1230830 | 0.801241 | 9.879845e-49 | -8.615850e-47 |
| Msa1032440 | Msa1230830 | 0.833590 | 4.885640e-56 | -8.615850e-47 |
| Msa1041600 | Msa1230830 | -0.812899 | 3.361118e-51 | -8.615850e-47 |
| Msa1068200 | Msa1230830 | -0.813890 | 2.035487e-51 | -8.615850e-47 |
| Msa1070840 | Msa1230830 | 0.809031 | 2.313093e-50 | -8.615850e-47 |
| Msa1070850 | Msa1230830 | 0.814730 | 1.327859e-51 | -8.615850e-47 |
| Msa1074530 | Msa1230830 | 0.843424 | 1.413032e-58 | -8.615850e-47 |
| Msa1075080 | Msa1230830 | -0.844499 | 7.281370e-59 | -8.615850e-47 |
| Msa1080790 | Msa1230830 | 0.809052 | 2.288803e-50 | -8.615850e-47 |
| Msa1084260 | Msa1230830 | 0.804753 | 1.856642e-49 | -8.615850e-47 |
| Msa1092090 | Msa1230830 | 0.848298 | 6.702727e-60 | -8.615850e-47 |
| Msa1100480 | Msa1230830 | 0.840104 | 1.062774e-57 | -8.615850e-47 |
| Msa1102790 | Msa1230830 | 0.805913 | 1.061193e-49 | -8.615850e-47 |
| Msa0250670 | Msa1230830 | 0.802416 | 5.667892e-49 | -8.615850e-47 |
| Msa0271580 | Msa1230830 | 0.848687 | 5.228460e-60 | -8.615850e-47 |
| Msa0271650 | Msa1230830 | 0.839822 | 1.258979e-57 | -8.615850e-47 |
| Msa0347610 | Msa1230830 | 0.806866 | 6.680369e-50 | -8.615850e-47 |
| Msa0347650 | Msa1230830 | 0.835851 | 1.318866e-56 | -8.615850e-47 |
| Msa1109820 | Msa1230830 | 0.823604 | 1.266474e-53 | -8.615850e-47 |
| Msa1118110 | Msa1230830 | 0.836555 | 8.736162e-57 | -8.615850e-47 |
| Msa1118750 | Msa1230830 | 0.804696 | 1.908120e-49 | -8.615850e-47 |
| Msa1118930 | Msa1230830 | 0.810529 | 1.101899e-50 | -8.615850e-47 |
| Msa1124540 | Msa1230830 | -0.823827 | 1.123023e-53 | -8.615850e-47 |
| Msa1130110 | Msa1230830 | 0.800926 | 1.146046e-48 | -8.615850e-47 |
| Msa1132950 | Msa1230830 | 0.855887 | 4.666595e-62 | -8.615850e-47 |
| Msa1143270 | Msa1230830 | 0.807171 | 5.758504e-50 | -8.615850e-47 |
| Msa1155350 | Msa1230830 | 0.810070 | 1.383688e-50 | -8.615850e-47 |
| Msa1156340 | Msa1230830 | -0.803319 | 3.688842e-49 | -8.615850e-47 |
| Msa1158670 | Msa1230830 | 0.843561 | 1.299023e-58 | -8.615850e-47 |
| Msa1163590 | Msa1230830 | -0.810185 | 1.307192e-50 | -8.615850e-47 |
| Msa1166500 | Msa1230830 | -0.811152 | 8.076454e-51 | -8.615850e-47 |
| Msa1170800 | Msa1230830 | 0.819337 | 1.224495e-52 | -8.615850e-47 |
| Msa1174310 | Msa1230830 | 0.897874 | 9.200679e-77 | -8.615850e-47 |
| Msa1178110 | Msa1230830 | 0.802883 | 4.541270e-49 | -8.615850e-47 |
| Msa1202750 | Msa1230830 | 0.867066 | 1.800010e-65 | -8.615850e-47 |
| Msa1205390 | Msa1230830 | 0.813787 | 2.144983e-51 | -8.615850e-47 |
| Msa1207380 | Msa1230830 | 0.815027 | 1.141003e-51 | -8.615850e-47 |
| Msa1214880 | Msa1230830 | 0.814894 | 1.221107e-51 | -8.615850e-47 |
| Msa1217810 | Msa1230830 | 0.805066 | 1.597124e-49 | -8.615850e-47 |
| Msa1222280 | Msa1230830 | 0.821541 | 3.821848e-53 | -8.615850e-47 |
| Msa1224480 | Msa1230830 | 0.808628 | 2.820863e-50 | -8.615850e-47 |
| Msa0485490 | Msa1230830 | 0.804484 | 2.112559e-49 | -8.615850e-47 |
| Msa0485500 | Msa1230830 | -0.826291 | 2.941074e-54 | -8.615850e-47 |
| Msa0489610 | Msa1230830 | 0.814681 | 1.361201e-51 | -8.615850e-47 |
| Msa0516370 | Msa1230830 | 0.807263 | 5.505872e-50 | -8.615850e-47 |
| Msa0525610 | Msa1230830 | 0.802822 | 4.675706e-49 | -8.615850e-47 |
| Msa0530650 | Msa1230830 | 0.858818 | 6.345062e-63 | -8.615850e-47 |
| Msa0532810 | Msa1230830 | -0.815049 | 1.128199e-51 | -8.615850e-47 |
| Msa0553460 | Msa1230830 | 0.819792 | 9.644457e-53 | -8.615850e-47 |
| Msa0574850 | Msa1230830 | 0.838766 | 2.366718e-57 | -8.615850e-47 |
| Msa0578970 | Msa1230830 | 0.808384 | 3.180787e-50 | -8.615850e-47 |
| Msa0579130 | Msa1230830 | 0.816697 | 4.838051e-52 | -8.615850e-47 |
| Msa0580000 | Msa1230830 | 0.815986 | 6.979269e-52 | -8.615850e-47 |
| Msa0587190 | Msa1230830 | 0.847868 | 8.804687e-60 | -8.615850e-47 |
| Msa0594790 | Msa1230830 | 0.810131 | 1.342803e-50 | -8.615850e-47 |
| Msa0599580 | Msa1230830 | 0.824389 | 8.289167e-54 | -8.615850e-47 |
| Msa0842770 | Msa1230830 | 0.814905 | 1.214060e-51 | -8.615850e-47 |
| Msa0845070 | Msa1230830 | 0.828975 | 6.668436e-55 | -8.615850e-47 |
| Msa0848900 | Msa1230830 | 0.806600 | 7.602148e-50 | -8.615850e-47 |
| Msa0864470 | Msa1230830 | -0.801249 | 9.845462e-49 | -8.615850e-47 |
| Msa0876850 | Msa1230830 | -0.809243 | 2.083827e-50 | -8.615850e-47 |
| Msa0908170 | Msa1230830 | 0.803597 | 3.231864e-49 | -8.615850e-47 |
| Msa0944550 | Msa1230830 | 0.821760 | 3.401050e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1230830 | MtrunA17_Chr8g0344131 | 94.944 | 178 | 9 | 0 | 1 | 178 | 449 | 626 | 8.87e-125 | 371 |
| Msa1230830 | MtrunA17_Chr5g0395711 | 47.368 | 114 | 51 | 1 | 2 | 106 | 459 | 572 | 1.32e-25 | 105 |
| Msa1230830 | MtrunA17_Chr4g0069291 | 36.036 | 111 | 57 | 2 | 2 | 98 | 323 | 433 | 4.55e-16 | 77.8 |
| Msa1230830 | MtrunA17_Chr7g0269591 | 32.026 | 153 | 87 | 3 | 3 | 140 | 386 | 536 | 2.53e-15 | 75.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1230830 | AT1G54130.1 | 73.034 | 178 | 45 | 1 | 1 | 178 | 441 | 615 | 6.73e-91 | 284 |
| Msa1230830 | AT3G14050.1 | 77.401 | 177 | 40 | 0 | 2 | 178 | 438 | 614 | 7.52e-90 | 281 |
| Msa1230830 | AT4G02260.4 | 33.529 | 170 | 78 | 4 | 4 | 139 | 389 | 557 | 2.03e-15 | 76.3 |
| Msa1230830 | AT4G02260.3 | 33.529 | 170 | 78 | 4 | 4 | 139 | 389 | 557 | 2.21e-15 | 76.3 |
| Msa1230830 | AT4G02260.2 | 41.818 | 110 | 49 | 2 | 4 | 98 | 389 | 498 | 2.41e-15 | 76.3 |
| Msa1230830 | AT3G17470.3 | 36.036 | 111 | 57 | 2 | 2 | 98 | 320 | 430 | 6.32e-14 | 71.6 |
| Msa1230830 | AT4G02260.1 | 41.441 | 111 | 49 | 3 | 4 | 98 | 389 | 499 | 8.09e-14 | 71.6 |
| Msa1230830 | AT3G17470.2 | 36.036 | 111 | 57 | 2 | 2 | 98 | 335 | 445 | 8.88e-14 | 71.2 |
| Msa1230830 | AT3G17470.1 | 36.036 | 111 | 57 | 2 | 2 | 98 | 320 | 430 | 1.04e-13 | 71.2 |
Find 62 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATGATATCCATGACATTTA+TGG | 0.178626 | 8_2:+6928073 | Msa1230830:CDS |
| ATGCATTTGCAAGCAGAATT+TGG | 0.213922 | 8_2:+6928371 | Msa1230830:CDS |
| GATAAGGAACATGCATATAT+TGG | 0.258325 | 8_2:+6931399 | Msa1230830:CDS |
| CAATCAGGCTTGTAAGAATA+TGG | 0.312359 | 8_2:-6928581 | None:intergenic |
| TAGAAGTTGTTCACCGGTTA+TGG | 0.315278 | 8_2:+6928140 | Msa1230830:CDS |
| ATGATATCCATGACATTTAT+GGG | 0.372392 | 8_2:+6928074 | Msa1230830:CDS |
| GCTGAGCCTTGGACAAATAC+TGG | 0.383322 | 8_2:-6931316 | None:intergenic |
| TAACCGGTGAACAACTTCTA+AGG | 0.405585 | 8_2:-6928137 | None:intergenic |
| TTGTTCGAATTTGTACTTCA+AGG | 0.408493 | 8_2:-6928343 | None:intergenic |
| TTCCATGTTGCGCTGAGCCT+TGG | 0.411214 | 8_2:-6931327 | None:intergenic |
| CAAGCAAGATCAACGCCATT+AGG | 0.424795 | 8_2:-6931432 | None:intergenic |
| GGTCCATCCTGCTCGCAATC+AGG | 0.436241 | 8_2:-6928596 | None:intergenic |
| ATAAGGAACATGCATATATT+GGG | 0.436620 | 8_2:+6931400 | Msa1230830:CDS |
| ATCTCTGCACACTGTGGTGA+TGG | 0.443111 | 8_2:+6928304 | Msa1230830:CDS |
| AGTAAAGATTCCACTTCTGT+TGG | 0.443308 | 8_2:+6928503 | Msa1230830:CDS |
| AATTTGGATTCGCTGCTCAT+TGG | 0.445751 | 8_2:+6928387 | Msa1230830:CDS |
| TGTATTAAAAGTATTATAAA+CGG | 0.446288 | 8_2:-6931516 | None:intergenic |
| CATGCACCTCAGACCATAAC+CGG | 0.449375 | 8_2:-6928153 | None:intergenic |
| TACAACATACCCATTGAACT+TGG | 0.450219 | 8_2:-6928203 | None:intergenic |
| ATACATTGCCCCAAGTTCAA+TGG | 0.454579 | 8_2:+6928193 | Msa1230830:CDS |
| TTGGATTCGCTGCTCATTGG+AGG | 0.470246 | 8_2:+6928390 | Msa1230830:CDS |
| ATTGGGTCTTGTCAGCCTAA+TGG | 0.471002 | 8_2:+6931417 | Msa1230830:CDS |
| TACATTGCCCCAAGTTCAAT+GGG | 0.477235 | 8_2:+6928194 | Msa1230830:CDS |
| TGTTCGAATTTGTACTTCAA+GGG | 0.486391 | 8_2:-6928342 | None:intergenic |
| GCTGCGCTTGATTGTTGATA+AGG | 0.487554 | 8_2:+6928096 | Msa1230830:CDS |
| TGAAAATCACTGCATCGATA+AGG | 0.487661 | 8_2:+6931383 | Msa1230830:CDS |
| GGGCTCGATGGGTTGTCACC+TGG | 0.495606 | 8_2:+6928465 | Msa1230830:CDS |
| CGCTGCTCATTGGAGGTACA+AGG | 0.516170 | 8_2:+6928397 | Msa1230830:CDS |
| TTCTTCATATGTGCTTCAGA+TGG | 0.516537 | 8_2:+6928436 | Msa1230830:CDS |
| CGGTTATGGTCTGAGGTGCA+TGG | 0.519568 | 8_2:+6928154 | Msa1230830:CDS |
| TTACAAGCCTGATTGCGAGC+AGG | 0.526518 | 8_2:+6928589 | Msa1230830:CDS |
| ACAACATACCCATTGAACTT+GGG | 0.535483 | 8_2:-6928202 | None:intergenic |
| AGATGGTTGAGTGGGCTCGA+TGG | 0.537950 | 8_2:+6928453 | Msa1230830:CDS |
| GATGGTTGAGTGGGCTCGAT+GGG | 0.540134 | 8_2:+6928454 | Msa1230830:CDS |
| GACAGTTATCAGCATGAGAA+GGG | 0.546477 | 8_2:-6928559 | None:intergenic |
| ATCGACAAATCCAACAGAAG+TGG | 0.547140 | 8_2:-6928513 | None:intergenic |
| TATTATAAACGGAATAACAT+TGG | 0.550320 | 8_2:-6931505 | None:intergenic |
| TAACATTGGTTGAACCAGAA+AGG | 0.554837 | 8_2:-6931491 | None:intergenic |
| AGCGCAGCCCATAAATGTCA+TGG | 0.564123 | 8_2:-6928081 | None:intergenic |
| CAACATACCCATTGAACTTG+GGG | 0.571860 | 8_2:-6928201 | None:intergenic |
| TTTGGTTCATTCGTGTGCAG+AGG | 0.573717 | 8_2:+6931287 | Msa1230830:CDS |
| GGACAGTTATCAGCATGAGA+AGG | 0.573734 | 8_2:-6928560 | None:intergenic |
| TGTTCACCGGTTATGGTCTG+AGG | 0.575398 | 8_2:+6928147 | Msa1230830:CDS |
| TCTCTGCACACTGTGGTGAT+GGG | 0.580339 | 8_2:+6928305 | Msa1230830:CDS |
| AAGCCTTAGAAGTTGTTCAC+CGG | 0.583932 | 8_2:+6928134 | Msa1230830:CDS |
| CACTTAAAGGTGTCTCGATG+TGG | 0.584307 | 8_2:-6931360 | None:intergenic |
| AAGGTGTCTCGATGTGGACA+CGG | 0.587602 | 8_2:-6931354 | None:intergenic |
| GGTTATGGTCTGAGGTGCAT+GGG | 0.593196 | 8_2:+6928155 | Msa1230830:CDS |
| CACACTGTGGTGATGGGTGA+AGG | 0.596315 | 8_2:+6928311 | Msa1230830:CDS |
| GCGCTTGATTGTTGATAAGG+AGG | 0.603331 | 8_2:+6928099 | Msa1230830:CDS |
| GTTCGAATTTGTACTTCAAG+GGG | 0.605083 | 8_2:-6928341 | None:intergenic |
| GCATGAGAAGGGAACTTGCA+AGG | 0.608349 | 8_2:-6928548 | None:intergenic |
| TGTGCTTCAGATGGTTGAGT+GGG | 0.610056 | 8_2:+6928445 | Msa1230830:CDS |
| ATGTGCTTCAGATGGTTGAG+TGG | 0.615998 | 8_2:+6928444 | Msa1230830:CDS |
| TACAAGCCAGTATTTGTCCA+AGG | 0.620094 | 8_2:+6931310 | Msa1230830:CDS |
| TGTGGTGATGGGTGAAGGCA+AGG | 0.624487 | 8_2:+6928316 | Msa1230830:CDS |
| AAGCCTGATTGCGAGCAGGA+TGG | 0.626790 | 8_2:+6928593 | Msa1230830:CDS |
| GTCCAAGGCTCAGCGCAACA+TGG | 0.627467 | 8_2:+6931325 | Msa1230830:CDS |
| TCAATCATGATAACAAACAC+AGG | 0.655763 | 8_2:-6928617 | None:intergenic |
| TATCATGATTGAGAATGACA+AGG | 0.707357 | 8_2:+6928628 | Msa1230830:CDS |
| TGAGAAGGGAACTTGCAAGG+TGG | 0.737719 | 8_2:-6928545 | None:intergenic |
| TTATCAATCTCTGCACACTG+TGG | 0.751179 | 8_2:+6928298 | Msa1230830:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATATTAATAAGTGATAA+GGG | - | chr8_2:6929542-6929561 | None:intergenic | 10.0% |
| !! | AATTATATTAATAAGTGATA+AGG | - | chr8_2:6929543-6929562 | None:intergenic | 10.0% |
| !! | AATTAATCTTCATTAATAAT+TGG | - | chr8_2:6930661-6930680 | None:intergenic | 10.0% |
| !!! | TAGAATTATGTTCAATATTT+TGG | + | chr8_2:6928658-6928677 | Msa1230830:intron | 15.0% |
| !!! | AGAATTATGTTCAATATTTT+GGG | + | chr8_2:6928659-6928678 | Msa1230830:intron | 15.0% |
| !! | AAGCTATATAAATAAATATG+TGG | + | chr8_2:6930880-6930899 | Msa1230830:intron | 15.0% |
| !!! | AGTTTTCTTATTAATTACTA+TGG | + | chr8_2:6930947-6930966 | Msa1230830:intron | 15.0% |
| !! | TTTATTGAAAAACAAACATT+AGG | + | chr8_2:6931082-6931101 | Msa1230830:intron | 15.0% |
| !! | TAAGTATATCAATTATCAAA+AGG | - | chr8_2:6931212-6931231 | None:intergenic | 15.0% |
| !! | ATAAATAATGAAATGAAAGC+AGG | - | chr8_2:6928710-6928729 | None:intergenic | 20.0% |
| !! | TATTACAAACAGAATAACAT+TGG | - | chr8_2:6928883-6928902 | None:intergenic | 20.0% |
| !!! | TCTTTAAAGCATTAAGTATA+TGG | - | chr8_2:6929209-6929228 | None:intergenic | 20.0% |
| !!! | TTATTTTTGTTTTTGTTGTG+TGG | + | chr8_2:6929457-6929476 | Msa1230830:intron | 20.0% |
| !!! | ATGACTCAATTTTATGTATT+GGG | - | chr8_2:6929677-6929696 | None:intergenic | 20.0% |
| !!! | AATGACTCAATTTTATGTAT+TGG | - | chr8_2:6929678-6929697 | None:intergenic | 20.0% |
| !! | AATTGAGTCATTAATTAAGA+AGG | + | chr8_2:6929686-6929705 | Msa1230830:intron | 20.0% |
| !! | TTAAATCGGCTAAAAAATTA+AGG | + | chr8_2:6929765-6929784 | Msa1230830:intron | 20.0% |
| !! | TTAGTAAAAAAAATTGGTTG+TGG | - | chr8_2:6929992-6930011 | None:intergenic | 20.0% |
| !! | AAAAAATTGTTCGGTAAAAT+GGG | - | chr8_2:6930256-6930275 | None:intergenic | 20.0% |
| !! | AAAAAAATTGTTCGGTAAAA+TGG | - | chr8_2:6930257-6930276 | None:intergenic | 20.0% |
| !!! | AAATCAAAGATTCCATTTTA+TGG | - | chr8_2:6930583-6930602 | None:intergenic | 20.0% |
| !! | TTTACTTTGTCAAAAAATCT+TGG | + | chr8_2:6930917-6930936 | Msa1230830:intron | 20.0% |
| !! | TTTGAAGTGTGCAAATAATA+TGG | - | chr8_2:6928004-6928023 | None:intergenic | 25.0% |
| ! | ATGATATCCATGACATTTAT+GGG | + | chr8_2:6928074-6928093 | Msa1230830:CDS | 25.0% |
| ! | TAAATCAGATGATATAGAGA+CGG | - | chr8_2:6928261-6928280 | None:intergenic | 25.0% |
| !!! | TTCAATATTTTGGGTTTAGT+TGG | + | chr8_2:6928668-6928687 | Msa1230830:intron | 25.0% |
| ! | TCCACAAAAATTAACGTAAA+TGG | + | chr8_2:6928943-6928962 | Msa1230830:intron | 25.0% |
| !! | ACCATTTACGTTAATTTTTG+TGG | - | chr8_2:6928947-6928966 | None:intergenic | 25.0% |
| ! | AAGAATAAGATATTGATCTC+TGG | - | chr8_2:6929077-6929096 | None:intergenic | 25.0% |
| ! | TTAAAGATTGAACAGAAAGA+TGG | + | chr8_2:6929222-6929241 | Msa1230830:intron | 25.0% |
| ! | AGATTGAAATAGTCAACTTA+GGG | + | chr8_2:6929738-6929757 | Msa1230830:intron | 25.0% |
| ! | GTGTGGTTAGTAAAAAAAAT+TGG | - | chr8_2:6929998-6930017 | None:intergenic | 25.0% |
| ! | AAAAATTGTTCGGTAAAATG+GGG | - | chr8_2:6930255-6930274 | None:intergenic | 25.0% |
| !! | AAACACATATTGACATTTTG+AGG | + | chr8_2:6930333-6930352 | Msa1230830:intron | 25.0% |
| !! | GAAATATCCCAATTTTCTTA+AGG | - | chr8_2:6930364-6930383 | None:intergenic | 25.0% |
| ! | CCAAGTTTGTAATTAACAAA+GGG | + | chr8_2:6930547-6930566 | Msa1230830:intron | 25.0% |
| ! | CAAGTTTGTAATTAACAAAG+GGG | + | chr8_2:6930548-6930567 | Msa1230830:intron | 25.0% |
| !! | AAGATTCCATTTTATGGAAT+TGG | - | chr8_2:6930577-6930596 | None:intergenic | 25.0% |
| !! | TTTGATTTAATCGTTTGAGT+AGG | + | chr8_2:6930595-6930614 | Msa1230830:intron | 25.0% |
| ! | AAAGCTAAGAAAAAGAAAGA+TGG | - | chr8_2:6930819-6930838 | None:intergenic | 25.0% |
| ! | AGATAAGATTAATACCTCTA+GGG | - | chr8_2:6931112-6931131 | None:intergenic | 25.0% |
| !! | CCAAAGTTCTAATATTGTTT+GGG | - | chr8_2:6931158-6931177 | None:intergenic | 25.0% |
| !! | ACCAAAGTTCTAATATTGTT+TGG | - | chr8_2:6931159-6931178 | None:intergenic | 25.0% |
| !!! | CTTCTCACAATTTTTTCTTT+TGG | + | chr8_2:6931269-6931288 | Msa1230830:CDS | 25.0% |
| ! | ATAAGGAACATGCATATATT+GGG | + | chr8_2:6931400-6931419 | Msa1230830:CDS | 25.0% |
| ATAATATGGTGCATAATGTC+AGG | - | chr8_2:6927990-6928009 | None:intergenic | 30.0% | |
| TCATTTGTCTACATATTTGC+AGG | + | chr8_2:6928035-6928054 | Msa1230830:intron | 30.0% | |
| GATGATATCCATGACATTTA+TGG | + | chr8_2:6928073-6928092 | Msa1230830:CDS | 30.0% | |
| TGTTCGAATTTGTACTTCAA+GGG | - | chr8_2:6928345-6928364 | None:intergenic | 30.0% | |
| TTGTTCGAATTTGTACTTCA+AGG | - | chr8_2:6928346-6928365 | None:intergenic | 30.0% | |
| TCAATCATGATAACAAACAC+AGG | - | chr8_2:6928620-6928639 | None:intergenic | 30.0% | |
| TATCATGATTGAGAATGACA+AGG | + | chr8_2:6928628-6928647 | Msa1230830:CDS | 30.0% | |
| TTGATGCAGTGTTAAAACAA+AGG | - | chr8_2:6928751-6928770 | None:intergenic | 30.0% | |
| !! | GTTTTAACACTGCATCAATA+AGG | + | chr8_2:6928753-6928772 | Msa1230830:intron | 30.0% |
| ! | ATAACATTGGTTGAACAGAA+AGG | - | chr8_2:6928870-6928889 | None:intergenic | 30.0% |
| GTCGAAAAAATTGATGCATA+TGG | - | chr8_2:6928982-6929001 | None:intergenic | 30.0% | |
| ATACGAGTAAATCACTAACA+AGG | - | chr8_2:6929337-6929356 | None:intergenic | 30.0% | |
| GAGATTGAAATAGTCAACTT+AGG | + | chr8_2:6929737-6929756 | Msa1230830:intron | 30.0% | |
| !!! | TTTTGGAATGATTTAAGGTG+TGG | - | chr8_2:6929956-6929975 | None:intergenic | 30.0% |
| !!! | CCTGATTTTGGAATGATTTA+AGG | - | chr8_2:6929961-6929980 | None:intergenic | 30.0% |
| CCTTAAATCATTCCAAAATC+AGG | + | chr8_2:6929958-6929977 | Msa1230830:intron | 30.0% | |
| AAAAAATTGGTTGTGGTACA+AGG | - | chr8_2:6929985-6930004 | None:intergenic | 30.0% | |
| !!! | TTTTTTTACTAACCACACCA+CGG | + | chr8_2:6930000-6930019 | Msa1230830:intron | 30.0% |
| AAATTTCAATAGACCGAATG+TGG | - | chr8_2:6930090-6930109 | None:intergenic | 30.0% | |
| AAATGAGATAGTTACTGACA+CGG | - | chr8_2:6930120-6930139 | None:intergenic | 30.0% | |
| AAGAGTGACACTCATTAATT+CGG | - | chr8_2:6930393-6930412 | None:intergenic | 30.0% | |
| ! | TATTGGAGGAATTGATTCAA+AGG | - | chr8_2:6930425-6930444 | None:intergenic | 30.0% |
| AAAAACGCTGAAATTATTGG+AGG | - | chr8_2:6930439-6930458 | None:intergenic | 30.0% | |
| ! | AGATTCCATTTTGTTCATCT+CGG | - | chr8_2:6930525-6930544 | None:intergenic | 30.0% |
| GCCAAGTTTGTAATTAACAA+AGG | + | chr8_2:6930546-6930565 | Msa1230830:intron | 30.0% | |
| CCCTTTGTTAATTACAAACT+TGG | - | chr8_2:6930550-6930569 | None:intergenic | 30.0% | |
| AAGATGGTGTAGAATTTACA+AGG | - | chr8_2:6930803-6930822 | None:intergenic | 30.0% | |
| GATAAGATTAATACCTCTAG+GGG | - | chr8_2:6931111-6931130 | None:intergenic | 30.0% | |
| CAGATAAGATTAATACCTCT+AGG | - | chr8_2:6931113-6931132 | None:intergenic | 30.0% | |
| !! | AGAGGTATTAATCTTATCTG+AGG | + | chr8_2:6931113-6931132 | Msa1230830:intron | 30.0% |
| CCCAAACAATATTAGAACTT+TGG | + | chr8_2:6931155-6931174 | Msa1230830:intron | 30.0% | |
| ATGTCATGTTGTGAGAATTT+AGG | + | chr8_2:6931179-6931198 | Msa1230830:intron | 30.0% | |
| GATAAGGAACATGCATATAT+TGG | + | chr8_2:6931399-6931418 | Msa1230830:CDS | 30.0% | |
| TTACCTTTCCCTCTTTCATT+TGG | + | chr8_2:6927855-6927874 | Msa1230830:intron | 35.0% | |
| ACAACATACCCATTGAACTT+GGG | - | chr8_2:6928205-6928224 | None:intergenic | 35.0% | |
| TACAACATACCCATTGAACT+TGG | - | chr8_2:6928206-6928225 | None:intergenic | 35.0% | |
| GGTATGTTGTAGCTCAATAA+TGG | + | chr8_2:6928215-6928234 | Msa1230830:intron | 35.0% | |
| GTTCGAATTTGTACTTCAAG+GGG | - | chr8_2:6928344-6928363 | None:intergenic | 35.0% | |
| ATGCATTTGCAAGCAGAATT+TGG | + | chr8_2:6928371-6928390 | Msa1230830:CDS | 35.0% | |
| TTCTTCATATGTGCTTCAGA+TGG | + | chr8_2:6928436-6928455 | Msa1230830:CDS | 35.0% | |
| AGTAAAGATTCCACTTCTGT+TGG | + | chr8_2:6928503-6928522 | Msa1230830:CDS | 35.0% | |
| CAATCAGGCTTGTAAGAATA+TGG | - | chr8_2:6928584-6928603 | None:intergenic | 35.0% | |
| ! | AATAAGGAACACGCATTGAT+TGG | + | chr8_2:6928769-6928788 | Msa1230830:intron | 35.0% |
| !! | ATAAGGAACACGCATTGATT+GGG | + | chr8_2:6928770-6928789 | Msa1230830:intron | 35.0% |
| GGTATGAAATTTACTAGCAG+AGG | + | chr8_2:6929275-6929294 | Msa1230830:intron | 35.0% | |
| ! | TACTTCGATTTTGTTCCGAA+TGG | - | chr8_2:6929507-6929526 | None:intergenic | 35.0% |
| CAACTTAGGGTGTGTTAAAT+CGG | + | chr8_2:6929751-6929770 | Msa1230830:intron | 35.0% | |
| ! | ACAAGAAAGTTGCCTCATTT+TGG | - | chr8_2:6929885-6929904 | None:intergenic | 35.0% |
| TGTGATAAAGCAAAAAGACG+CGG | + | chr8_2:6929905-6929924 | Msa1230830:intron | 35.0% | |
| TGGAAGGATTTATGCAGTTT+AGG | - | chr8_2:6930056-6930075 | None:intergenic | 35.0% | |
| !! | GTGGGATTTGTTATGGAAAA+GGG | - | chr8_2:6930162-6930181 | None:intergenic | 35.0% |
| !! | ATTAGTGGTGGGATTTGTTA+TGG | - | chr8_2:6930169-6930188 | None:intergenic | 35.0% |
| ! | CCAAAAATATATGGTGGGAT+AGG | - | chr8_2:6930221-6930240 | None:intergenic | 35.0% |
| ! | CCTATCCCACCATATATTTT+TGG | + | chr8_2:6930218-6930237 | Msa1230830:intron | 35.0% |
| GTTTGTCGGCCAAAAATATA+TGG | - | chr8_2:6930230-6930249 | None:intergenic | 35.0% | |
| CAGGGGAGAAAAAAATTGTT+CGG | - | chr8_2:6930265-6930284 | None:intergenic | 35.0% | |
| AACGGAATTCTATATGGAGT+GGG | - | chr8_2:6930292-6930311 | None:intergenic | 35.0% | |
| TGCTTCAACGGAATTCTATA+TGG | - | chr8_2:6930298-6930317 | None:intergenic | 35.0% | |
| AGAAGAGTGAAATGCTTCAA+CGG | - | chr8_2:6930310-6930329 | None:intergenic | 35.0% | |
| AGGAACGACCTTAAGAAAAT+TGG | + | chr8_2:6930353-6930372 | Msa1230830:intron | 35.0% | |
| GGAACGACCTTAAGAAAATT+GGG | + | chr8_2:6930354-6930373 | Msa1230830:intron | 35.0% | |
| CGGAAAAACGCTGAAATTAT+TGG | - | chr8_2:6930442-6930461 | None:intergenic | 35.0% | |
| ! | GATTCCATTTTGTTCATCTC+GGG | - | chr8_2:6930524-6930543 | None:intergenic | 35.0% |
| GATCGAGTAAGTTAAAATGC+AGG | + | chr8_2:6930635-6930654 | Msa1230830:intron | 35.0% | |
| AATTCCTGCAGTTCAATTTG+TGG | + | chr8_2:6930677-6930696 | Msa1230830:intron | 35.0% | |
| CCTTATGTTAAAGTGTGTGA+GGG | - | chr8_2:6930734-6930753 | None:intergenic | 35.0% | |
| TCCTTATGTTAAAGTGTGTG+AGG | - | chr8_2:6930735-6930754 | None:intergenic | 35.0% | |
| ! | GCAGTGATTTTCACACTTAA+AGG | - | chr8_2:6931376-6931395 | None:intergenic | 35.0% |
| ! | TGAAAATCACTGCATCGATA+AGG | + | chr8_2:6931383-6931402 | Msa1230830:CDS | 35.0% |
| !!! | GTAGTGTTGTTTTTGTTAGC+AGG | - | chr8_2:6931472-6931491 | None:intergenic | 35.0% |
| CAAAAACAACACTACCTTTC+TGG | + | chr8_2:6931477-6931496 | Msa1230830:CDS | 35.0% | |
| ! | TAACATTGGTTGAACCAGAA+AGG | - | chr8_2:6931494-6931513 | None:intergenic | 35.0% |
| AAGCCTTAGAAGTTGTTCAC+CGG | + | chr8_2:6928134-6928153 | Msa1230830:CDS | 40.0% | |
| TAACCGGTGAACAACTTCTA+AGG | - | chr8_2:6928140-6928159 | None:intergenic | 40.0% | |
| ! | TAGAAGTTGTTCACCGGTTA+TGG | + | chr8_2:6928140-6928159 | Msa1230830:CDS | 40.0% |
| ATACATTGCCCCAAGTTCAA+TGG | + | chr8_2:6928193-6928212 | Msa1230830:CDS | 40.0% | |
| TACATTGCCCCAAGTTCAAT+GGG | + | chr8_2:6928194-6928213 | Msa1230830:CDS | 40.0% | |
| CAACATACCCATTGAACTTG+GGG | - | chr8_2:6928204-6928223 | None:intergenic | 40.0% | |
| TTATCAATCTCTGCACACTG+TGG | + | chr8_2:6928298-6928317 | Msa1230830:CDS | 40.0% | |
| AATTTGGATTCGCTGCTCAT+TGG | + | chr8_2:6928387-6928406 | Msa1230830:CDS | 40.0% | |
| ATCGACAAATCCAACAGAAG+TGG | - | chr8_2:6928516-6928535 | None:intergenic | 40.0% | |
| GACAGTTATCAGCATGAGAA+GGG | - | chr8_2:6928562-6928581 | None:intergenic | 40.0% | |
| AGTTCGAAGCTATCATCATC+AGG | - | chr8_2:6928805-6928824 | None:intergenic | 40.0% | |
| ! | CTTGCTTGCTTCTGTTACTT+CGG | + | chr8_2:6928823-6928842 | Msa1230830:intron | 40.0% |
| TGAACAGAAAGATGGTGCAT+TGG | + | chr8_2:6929254-6929273 | Msa1230830:intron | 40.0% | |
| ! | AGGAAGACATGCTTGCTAAA+TGG | + | chr8_2:6929295-6929314 | Msa1230830:intron | 40.0% |
| !! | TTGCCTCATTTTGGAGATAG+GGG | - | chr8_2:6929876-6929895 | None:intergenic | 40.0% |
| !! | GTTGCCTCATTTTGGAGATA+GGG | - | chr8_2:6929877-6929896 | None:intergenic | 40.0% |
| !! | AGTTGCCTCATTTTGGAGAT+AGG | - | chr8_2:6929878-6929897 | None:intergenic | 40.0% |
| TAAAGCAAAAAGACGCGGAA+AGG | + | chr8_2:6929910-6929929 | Msa1230830:intron | 40.0% | |
| !!! | GGAAAGGTGAGGTTTTGAAT+GGG | + | chr8_2:6929926-6929945 | Msa1230830:intron | 40.0% |
| GGATTTATGCAGTTTAGGTG+AGG | - | chr8_2:6930051-6930070 | None:intergenic | 40.0% | |
| CACCATAAAGAAGCCACATT+CGG | + | chr8_2:6930074-6930093 | Msa1230830:intron | 40.0% | |
| !! | GTTATGGAAAAGGGTGTTGA+TGG | - | chr8_2:6930153-6930172 | None:intergenic | 40.0% |
| !! | GGTGGGATTTGTTATGGAAA+AGG | - | chr8_2:6930163-6930182 | None:intergenic | 40.0% |
| TAGTGGAGGTTATTAGTGGT+GGG | - | chr8_2:6930180-6930199 | None:intergenic | 40.0% | |
| TTAGTGGAGGTTATTAGTGG+TGG | - | chr8_2:6930181-6930200 | None:intergenic | 40.0% | |
| AGCTTAGTGGAGGTTATTAG+TGG | - | chr8_2:6930184-6930203 | None:intergenic | 40.0% | |
| ! | AAGGGTTTAAAGCTTAGTGG+AGG | - | chr8_2:6930194-6930213 | None:intergenic | 40.0% |
| ! | GTGAAGGGTTTAAAGCTTAG+TGG | - | chr8_2:6930197-6930216 | None:intergenic | 40.0% |
| GTCGGCCAAAAATATATGGT+GGG | - | chr8_2:6930226-6930245 | None:intergenic | 40.0% | |
| TGTCGGCCAAAAATATATGG+TGG | - | chr8_2:6930227-6930246 | None:intergenic | 40.0% | |
| GGTAAAATGGGGATGTTTGT+CGG | - | chr8_2:6930244-6930263 | None:intergenic | 40.0% | |
| CAACGGAATTCTATATGGAG+TGG | - | chr8_2:6930293-6930312 | None:intergenic | 40.0% | |
| !! | ACACTCATTAATTCGGTGCT+GGG | - | chr8_2:6930386-6930405 | None:intergenic | 40.0% |
| TTCCAGTGAATCCTAATCCA+AGG | - | chr8_2:6930500-6930519 | None:intergenic | 40.0% | |
| GGGACACCAATTCCATAAAA+TGG | + | chr8_2:6930568-6930587 | Msa1230830:intron | 40.0% | |
| TCTTCCACAAATTGAACTGC+AGG | - | chr8_2:6930684-6930703 | None:intergenic | 40.0% | |
| CCCTCACACACTTTAACATA+AGG | + | chr8_2:6930731-6930750 | Msa1230830:intron | 40.0% | |
| GGTGTAGAATTTACAAGGAG+AGG | - | chr8_2:6930798-6930817 | None:intergenic | 40.0% | |
| ! | TCATATAGTCTTACCCAGTG+TGG | - | chr8_2:6930858-6930877 | None:intergenic | 40.0% |
| AAACATTAGGTTTCCCCTAG+AGG | + | chr8_2:6931095-6931114 | Msa1230830:intron | 40.0% | |
| TACAAGCCAGTATTTGTCCA+AGG | + | chr8_2:6931310-6931329 | Msa1230830:CDS | 40.0% | |
| CAGCCAAATGAAAGAGGGAA+AGG | - | chr8_2:6927861-6927880 | None:intergenic | 45.0% | |
| CTTTCCCTCTTTCATTTGGC+TGG | + | chr8_2:6927859-6927878 | Msa1230830:intron | 45.0% | |
| GTGACCAGCCAAATGAAAGA+GGG | - | chr8_2:6927866-6927885 | None:intergenic | 45.0% | |
| AGTGACCAGCCAAATGAAAG+AGG | - | chr8_2:6927867-6927886 | None:intergenic | 45.0% | |
| GCTGCGCTTGATTGTTGATA+AGG | + | chr8_2:6928096-6928115 | Msa1230830:CDS | 45.0% | |
| ! | GCGCTTGATTGTTGATAAGG+AGG | + | chr8_2:6928099-6928118 | Msa1230830:CDS | 45.0% |
| ATGTGCTTCAGATGGTTGAG+TGG | + | chr8_2:6928444-6928463 | Msa1230830:CDS | 45.0% | |
| TGTGCTTCAGATGGTTGAGT+GGG | + | chr8_2:6928445-6928464 | Msa1230830:CDS | 45.0% | |
| GGACAGTTATCAGCATGAGA+AGG | - | chr8_2:6928563-6928582 | None:intergenic | 45.0% | |
| ! | AATGGAGTACCTACACAACG+AGG | - | chr8_2:6929489-6929508 | None:intergenic | 45.0% |
| CGTTGTGTAGGTACTCCATT+CGG | + | chr8_2:6929489-6929508 | Msa1230830:intron | 45.0% | |
| TAAAAACCGAGCTGAACCAC+TGG | - | chr8_2:6929821-6929840 | None:intergenic | 45.0% | |
| !! | TCATTTTGGAGATAGGGGAG+TGG | - | chr8_2:6929871-6929890 | None:intergenic | 45.0% |
| ACTCCCCTATCTCCAAAATG+AGG | + | chr8_2:6929870-6929889 | Msa1230830:intron | 45.0% | |
| !!! | CGGAAAGGTGAGGTTTTGAA+TGG | + | chr8_2:6929925-6929944 | Msa1230830:intron | 45.0% |
| ! | GTGGTACAAGGACCTGATTT+TGG | - | chr8_2:6929973-6929992 | None:intergenic | 45.0% |
| GAACCAATCCAACCTCTTAC+CGG | + | chr8_2:6930022-6930041 | Msa1230830:intron | 45.0% | |
| ! | TGTGGCTTCTTTATGGTGGA+AGG | - | chr8_2:6930072-6930091 | None:intergenic | 45.0% |
| CGAATGTGGCTTCTTTATGG+TGG | - | chr8_2:6930076-6930095 | None:intergenic | 45.0% | |
| GACCGAATGTGGCTTCTTTA+TGG | - | chr8_2:6930079-6930098 | None:intergenic | 45.0% | |
| ! | TATGGTGGGATAGGAGTGAA+GGG | - | chr8_2:6930212-6930231 | None:intergenic | 45.0% |
| ! | ATATGGTGGGATAGGAGTGA+AGG | - | chr8_2:6930213-6930232 | None:intergenic | 45.0% |
| !! | GACACTCATTAATTCGGTGC+TGG | - | chr8_2:6930387-6930406 | None:intergenic | 45.0% |
| ! | AATTGATTCAAAGGCCCTGG+TGG | - | chr8_2:6930416-6930435 | None:intergenic | 45.0% |
| ! | AGGAATTGATTCAAAGGCCC+TGG | - | chr8_2:6930419-6930438 | None:intergenic | 45.0% |
| !! | GATCTGATGGTGGAGGTTAT+CGG | - | chr8_2:6930462-6930481 | None:intergenic | 45.0% |
| !! | TACTTTGGATCTGATGGTGG+AGG | - | chr8_2:6930469-6930488 | None:intergenic | 45.0% |
| GTCTACTTTGGATCTGATGG+TGG | - | chr8_2:6930472-6930491 | None:intergenic | 45.0% | |
| GACGTCTACTTTGGATCTGA+TGG | - | chr8_2:6930475-6930494 | None:intergenic | 45.0% | |
| ! | GTCCTTGGATTAGGATTCAC+TGG | + | chr8_2:6930495-6930514 | Msa1230830:intron | 45.0% |
| GAAGCCCGAGATGAACAAAA+TGG | + | chr8_2:6930517-6930536 | Msa1230830:intron | 45.0% | |
| ! | ACTCATCCTTTTCTCCACAC+TGG | + | chr8_2:6930841-6930860 | Msa1230830:intron | 45.0% |
| ! | CTCATCCTTTTCTCCACACT+GGG | + | chr8_2:6930842-6930861 | Msa1230830:intron | 45.0% |
| TCTTACCCAGTGTGGAGAAA+AGG | - | chr8_2:6930850-6930869 | None:intergenic | 45.0% | |
| ! | TTTGGTTCATTCGTGTGCAG+AGG | + | chr8_2:6931287-6931306 | Msa1230830:CDS | 45.0% |
| !! | CACTTAAAGGTGTCTCGATG+TGG | - | chr8_2:6931363-6931382 | None:intergenic | 45.0% |
| ! | ATTGGGTCTTGTCAGCCTAA+TGG | + | chr8_2:6931417-6931436 | Msa1230830:CDS | 45.0% |
| CAAGCAAGATCAACGCCATT+AGG | - | chr8_2:6931435-6931454 | None:intergenic | 45.0% | |
| !!! | ATATTTTATTATTGAAATTA+AGG | - | chr8_2:6929110-6929129 | None:intergenic | 5.0% |
| AGCGCAGCCCATAAATGTCA+TGG | - | chr8_2:6928084-6928103 | None:intergenic | 50.0% | |
| ! | TGTTCACCGGTTATGGTCTG+AGG | + | chr8_2:6928147-6928166 | Msa1230830:CDS | 50.0% |
| CATGCACCTCAGACCATAAC+CGG | - | chr8_2:6928156-6928175 | None:intergenic | 50.0% | |
| ! | GGTTATGGTCTGAGGTGCAT+GGG | + | chr8_2:6928155-6928174 | Msa1230830:CDS | 50.0% |
| ATCTCTGCACACTGTGGTGA+TGG | + | chr8_2:6928304-6928323 | Msa1230830:CDS | 50.0% | |
| TCTCTGCACACTGTGGTGAT+GGG | + | chr8_2:6928305-6928324 | Msa1230830:CDS | 50.0% | |
| TTGGATTCGCTGCTCATTGG+AGG | + | chr8_2:6928390-6928409 | Msa1230830:CDS | 50.0% | |
| TGAGAAGGGAACTTGCAAGG+TGG | - | chr8_2:6928548-6928567 | None:intergenic | 50.0% | |
| GCATGAGAAGGGAACTTGCA+AGG | - | chr8_2:6928551-6928570 | None:intergenic | 50.0% | |
| TTACAAGCCTGATTGCGAGC+AGG | + | chr8_2:6928589-6928608 | Msa1230830:CDS | 50.0% | |
| TGGCTTCTACCTCGTTGTGT+AGG | + | chr8_2:6929477-6929496 | Msa1230830:intron | 50.0% | |
| ! | ACCACTGGTCAGATAGTGGT+TGG | - | chr8_2:6929806-6929825 | None:intergenic | 50.0% |
| CTGAACCACTGGTCAGATAG+TGG | - | chr8_2:6929810-6929829 | None:intergenic | 50.0% | |
| ATCTGACCAGTGGTTCAGCT+CGG | + | chr8_2:6929812-6929831 | Msa1230830:intron | 50.0% | |
| CAAAAAGACGCGGAAAGGTG+AGG | + | chr8_2:6929915-6929934 | Msa1230830:intron | 50.0% | |
| !! | AAGAGGTTGGATTGGTTCCG+TGG | - | chr8_2:6930020-6930039 | None:intergenic | 50.0% |
| TGACCGGTAAGAGGTTGGAT+TGG | - | chr8_2:6930028-6930047 | None:intergenic | 50.0% | |
| TGCAGTTTAGGTGAGGTGAC+CGG | - | chr8_2:6930044-6930063 | None:intergenic | 50.0% | |
| !! | GGAAAAGGGTGTTGATGGCA+AGG | - | chr8_2:6930148-6930167 | None:intergenic | 50.0% |
| !! | TATATGGAGTGGGCTGTCAG+GGG | - | chr8_2:6930282-6930301 | None:intergenic | 50.0% |
| !! | CTATATGGAGTGGGCTGTCA+GGG | - | chr8_2:6930283-6930302 | None:intergenic | 50.0% |
| !! | TCTATATGGAGTGGGCTGTC+AGG | - | chr8_2:6930284-6930303 | None:intergenic | 50.0% |
| ! | ATGAGTGTCACTCTTCCACC+AGG | + | chr8_2:6930398-6930417 | Msa1230830:intron | 50.0% |
| ! | TGAGTGTCACTCTTCCACCA+GGG | + | chr8_2:6930399-6930418 | Msa1230830:intron | 50.0% |
| TCCAAAGTAGACGTCGTCCT+TGG | + | chr8_2:6930480-6930499 | Msa1230830:intron | 50.0% | |
| TCCAAGGACGACGTCTACTT+TGG | - | chr8_2:6930484-6930503 | None:intergenic | 50.0% | |
| GTAGACGTCGTCCTTGGATT+AGG | + | chr8_2:6930486-6930505 | Msa1230830:intron | 50.0% | |
| GCTGAGCCTTGGACAAATAC+TGG | - | chr8_2:6931319-6931338 | None:intergenic | 50.0% | |
| ! | AAGGTGTCTCGATGTGGACA+CGG | - | chr8_2:6931357-6931376 | None:intergenic | 50.0% |
| ! | CGGTTATGGTCTGAGGTGCA+TGG | + | chr8_2:6928154-6928173 | Msa1230830:CDS | 55.0% |
| !! | CACACTGTGGTGATGGGTGA+AGG | + | chr8_2:6928311-6928330 | Msa1230830:CDS | 55.0% |
| !! | TGTGGTGATGGGTGAAGGCA+AGG | + | chr8_2:6928316-6928335 | Msa1230830:CDS | 55.0% |
| ! | CGCTGCTCATTGGAGGTACA+AGG | + | chr8_2:6928397-6928416 | Msa1230830:CDS | 55.0% |
| ! | AGATGGTTGAGTGGGCTCGA+TGG | + | chr8_2:6928453-6928472 | Msa1230830:CDS | 55.0% |
| ! | GATGGTTGAGTGGGCTCGAT+GGG | + | chr8_2:6928454-6928473 | Msa1230830:CDS | 55.0% |
| ACTCATTGCTTCGCACTGCC+AGG | - | chr8_2:6928486-6928505 | None:intergenic | 55.0% | |
| AAGCCTGATTGCGAGCAGGA+TGG | + | chr8_2:6928593-6928612 | Msa1230830:CDS | 55.0% | |
| ! | GATAGTGGTTGGCGTTGGAG+TGG | - | chr8_2:6929795-6929814 | None:intergenic | 55.0% |
| ! | GGTCAGATAGTGGTTGGCGT+TGG | - | chr8_2:6929800-6929819 | None:intergenic | 55.0% |
| GCCAACCACTATCTGACCAG+TGG | + | chr8_2:6929802-6929821 | Msa1230830:intron | 55.0% | |
| !! | GTTGGATTGGTTCCGTGGTG+TGG | - | chr8_2:6930015-6930034 | None:intergenic | 55.0% |
| TGAGGTGACCGGTAAGAGGT+TGG | - | chr8_2:6930033-6930052 | None:intergenic | 55.0% | |
| TAGGTGAGGTGACCGGTAAG+AGG | - | chr8_2:6930037-6930056 | None:intergenic | 55.0% | |
| TTCCATGTTGCGCTGAGCCT+TGG | - | chr8_2:6931330-6931349 | None:intergenic | 55.0% | |
| GGTCCATCCTGCTCGCAATC+AGG | - | chr8_2:6928599-6928618 | None:intergenic | 60.0% | |
| CCTGAACCGAACCATGCCCA+CGG | + | chr8_2:6929842-6929861 | Msa1230830:intron | 60.0% | |
| GTCCAAGGCTCAGCGCAACA+TGG | + | chr8_2:6931325-6931344 | Msa1230830:CDS | 60.0% | |
| !! | GGGCTCGATGGGTTGTCACC+TGG | + | chr8_2:6928465-6928484 | Msa1230830:CDS | 65.0% |
| !! | CCGTGGGCATGGTTCGGTTC+AGG | - | chr8_2:6929845-6929864 | None:intergenic | 65.0% |
| TGGTCGCCGTGGGCATGGTT+CGG | - | chr8_2:6929851-6929870 | None:intergenic | 65.0% | |
| GATAGGGGAGTGGTCGCCGT+GGG | - | chr8_2:6929861-6929880 | None:intergenic | 65.0% | |
| AGATAGGGGAGTGGTCGCCG+TGG | - | chr8_2:6929862-6929881 | None:intergenic | 65.0% | |
| GGGAGTGGTCGCCGTGGGCA+TGG | - | chr8_2:6929856-6929875 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 6927834 | 6931525 | 6927834 | ID=Msa1230830;Name=Msa1230830 |
| chr8_2 | mRNA | 6927834 | 6931525 | 6927834 | ID=Msa1230830-mRNA-1;Parent=Msa1230830;Name=Msa1230830-mRNA-1;_AED=0.28;_eAED=0.30;_QI=0|0.66|0.5|1|0.33|0.5|4|0|269 |
| chr8_2 | exon | 6927834 | 6927847 | 6927834 | ID=Msa1230830-mRNA-1:exon:2591;Parent=Msa1230830-mRNA-1 |
| chr8_2 | exon | 6928057 | 6928215 | 6928057 | ID=Msa1230830-mRNA-1:exon:2592;Parent=Msa1230830-mRNA-1 |
| chr8_2 | exon | 6928298 | 6928649 | 6928298 | ID=Msa1230830-mRNA-1:exon:2593;Parent=Msa1230830-mRNA-1 |
| chr8_2 | exon | 6931241 | 6931525 | 6931241 | ID=Msa1230830-mRNA-1:exon:2594;Parent=Msa1230830-mRNA-1 |
| chr8_2 | CDS | 6927834 | 6927847 | 6927834 | ID=Msa1230830-mRNA-1:cds;Parent=Msa1230830-mRNA-1 |
| chr8_2 | CDS | 6928057 | 6928215 | 6928057 | ID=Msa1230830-mRNA-1:cds;Parent=Msa1230830-mRNA-1 |
| chr8_2 | CDS | 6928298 | 6928649 | 6928298 | ID=Msa1230830-mRNA-1:cds;Parent=Msa1230830-mRNA-1 |
| chr8_2 | CDS | 6931241 | 6931525 | 6931241 | ID=Msa1230830-mRNA-1:cds;Parent=Msa1230830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
