AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0130970

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0130970 MtrunA17_Chr1g0199511 95.087 1486 64 4 1 1482 1 1481 0.0 2929
Msa0130970 MtrunA17_Chr3g0116441 45.669 381 169 7 292 635 173 552 2.25e-99 352
Msa0130970 MtrunA17_Chr3g0116441 52.326 172 58 2 1332 1479 1397 1568 8.74e-50 194
Msa0130970 MtrunA17_Chr3g0116441 43.147 197 71 3 3 197 5 162 3.80e-39 160
Msa0130970 MtrunA17_Chr3g0116441 36.800 125 75 3 704 825 766 889 1.23e-15 83.2
Msa0130970 MtrunA17_Chr5g0410721 50.532 188 89 1 291 474 233 420 2.67e-57 214
Msa0130970 MtrunA17_Chr1g0164731 45.213 188 99 1 291 474 189 376 1.29e-50 189
Msa0130970 MtrunA17_Chr1g0164761 44.785 163 86 1 316 474 159 321 4.53e-45 172
Msa0130970 MtrunA17_Chr2g0303101 40.426 235 136 3 295 528 264 495 2.97e-43 172
Msa0130970 MtrunA17_Chr8g0380981 39.381 226 117 3 272 492 239 449 6.22e-41 165
Msa0130970 MtrunA17_Chr5g0397501 37.795 254 142 5 266 516 365 605 7.55e-41 165
Msa0130970 MtrunA17_Chr1g0189211 44.324 185 90 2 295 474 361 537 3.64e-39 159
Msa0130970 MtrunA17_Chr7g0261401 35.359 181 115 2 295 474 338 517 1.41e-26 118
Msa0130970 MtrunA17_Chr7g0214951 40.000 120 50 3 320 434 99 201 8.74e-21 92.8
Msa0130970 MtrunA17_Chr1g0197421 68.293 41 13 0 13 53 1 41 3.98e-14 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0130970 AT5G04240.1 52.280 943 363 20 1 921 1 878 0.0 922
Msa0130970 AT5G04240.1 56.650 203 82 3 1282 1478 1137 1339 6.20e-67 249
Msa0130970 AT3G48430.1 47.154 369 156 8 297 635 206 565 3.02e-96 340
Msa0130970 AT3G48430.1 63.717 113 41 0 1367 1479 1243 1355 1.23e-46 184
Msa0130970 AT3G48430.1 46.032 189 79 4 9 194 13 181 9.14e-34 142
Msa0130970 AT3G48430.1 34.286 140 87 4 704 840 737 874 5.96e-15 81.3
Msa0130970 AT5G46910.2 47.317 205 103 2 275 474 230 434 5.92e-56 207
Msa0130970 AT5G46910.1 47.317 205 103 2 275 474 230 434 9.22e-56 209
Msa0130970 AT3G48430.2 63.717 113 41 0 1367 1479 884 996 3.98e-47 185
Msa0130970 AT3G48430.2 33.023 215 105 8 451 635 1 206 8.00e-19 93.6
Msa0130970 AT3G48430.2 34.286 140 87 4 704 840 378 515 3.83e-15 81.6
Msa0130970 AT2G34880.1 30.149 471 227 13 16 474 61 441 8.74e-45 176
Msa0130970 AT1G63490.4 41.530 183 98 2 295 474 383 559 2.80e-40 164
Msa0130970 AT1G63490.2 41.530 183 98 2 295 474 383 559 3.07e-40 164
Msa0130970 AT1G63490.1 41.530 183 98 2 295 474 130 306 3.23e-40 163
Msa0130970 AT4G20400.1 42.268 194 99 2 291 479 263 448 4.68e-40 162
Msa0130970 AT4G20400.2 42.268 194 99 2 291 479 206 391 4.94e-40 162
Msa0130970 AT1G08620.3 44.565 184 99 1 291 474 375 555 5.90e-39 159
Msa0130970 AT1G08620.2 44.565 184 99 1 291 474 361 541 6.54e-39 159
Msa0130970 AT1G08620.4 44.565 184 99 1 291 474 361 541 6.54e-39 159
Msa0130970 AT1G08620.1 44.565 184 99 1 291 474 361 541 6.54e-39 159
Msa0130970 AT1G30810.3 43.716 183 94 2 295 474 265 441 1.16e-37 154
Msa0130970 AT1G30810.2 43.716 183 94 2 295 474 265 441 1.16e-37 154
Msa0130970 AT1G30810.1 43.716 183 94 2 295 474 265 441 1.16e-37 154
Msa0130970 AT2G38950.1 31.746 189 110 3 294 475 293 469 1.04e-23 108
Msa0130970 AT1G63490.3 39.535 86 52 0 389 474 15 100 2.56e-14 79.0

Find 349 sgRNAs with CRISPR-Local

Find 627 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCTTACCTTTGAAGAAAT+TGG 0.073340 1_3:+61466416 None:intergenic
TTTCCCCAAATCCCCAATTT+AGG 0.114967 1_3:-61466391 Msa0130970:five_prime_UTR
GCCAGCTGCTTTGAAACTTT+TGG 0.142212 1_3:-61463885 Msa0130970:intron
GAGCAGAAAGCTGGTAAATT+TGG 0.160512 1_3:-61466140 Msa0130970:CDS
TACCAATGGCTTCAGTAATT+TGG 0.188357 1_3:+61459384 None:intergenic
TATTGCATCCCCAGAAAATT+TGG 0.189649 1_3:-61460089 Msa0130970:CDS
ACCTTTCCATGTGCATTTAA+AGG 0.190859 1_3:+61458110 None:intergenic
AGGGCTGCGGTCTTTCTTTC+AGG 0.194000 1_3:-61458002 Msa0130970:CDS
GGTTGTATTAATGTCATAAA+TGG 0.206343 1_3:+61461665 None:intergenic
TTGAAAATATTCATTCATTT+TGG 0.209449 1_3:-61457920 Msa0130970:exon
ATTGCACGATGAAGTGATTT+TGG 0.213832 1_3:-61458892 Msa0130970:CDS
GTGCTTATAATTTGCCATTC+AGG 0.214739 1_3:-61460704 Msa0130970:intron
GTCCTGGTTTATCTTTAAAT+TGG 0.217100 1_3:-61459904 Msa0130970:CDS
GTAGCAATCTTCTCAGTTCT+TGG 0.217831 1_3:+61458411 None:intergenic
TCTTCGGCCTGGTTATTAAT+TGG 0.218887 1_3:+61459218 None:intergenic
AATTCTTGGAAAACGGGTTC+TGG 0.220595 1_3:-61465996 Msa0130970:CDS
CATCCAAGTTTACTGTATTA+TGG 0.226259 1_3:+61459030 None:intergenic
GCAAAGTAGAGTGCGAAATT+TGG 0.226627 1_3:+61466515 None:intergenic
CACTTTGCCAAACTTGCTTA+TGG 0.231366 1_3:+61465862 None:intergenic
TTCGAATACTGAAAAGAAAA+TGG 0.233515 1_3:-61458703 Msa0130970:CDS
CTGCTTGGAGCATGCTGTTC+AGG 0.235544 1_3:-61460762 Msa0130970:CDS
TTGAATACATGAGTCTTCTT+TGG 0.238673 1_3:+61458731 None:intergenic
TATTAATTTCATTTGTTGTT+AGG 0.239258 1_3:-61457619 Msa0130970:three_prime_UTR
TCTGATTTAGCTTCTACTTC+TGG 0.243338 1_3:-61461878 Msa0130970:CDS
AGAACATCCTATTTCTGATA+TGG 0.244065 1_3:+61458776 None:intergenic
CATTAGTTATATTCTCGTTT+TGG 0.254149 1_3:+61458847 None:intergenic
GGGGCCAGATATTAGTTCTT+TGG 0.261679 1_3:-61466027 Msa0130970:CDS
TAGTGGGAGCTTCAGCATTC+TGG 0.262846 1_3:+61459531 None:intergenic
AGCTTGACACAGACAATTTC+AGG 0.263346 1_3:-61459616 Msa0130970:CDS
ATGACATATGCACATGTTAT+AGG 0.263469 1_3:+61457888 None:intergenic
CTTTCTGACCATAAGCATTC+TGG 0.264244 1_3:-61457850 Msa0130970:three_prime_UTR
AAAACCCTAAATTGGGGATT+TGG 0.264931 1_3:+61466386 None:intergenic
AAACCCTAAATTGGGGATTT+GGG 0.267181 1_3:+61466387 None:intergenic
ATCCCCAATGCTAGCGTAAA+AGG 0.275717 1_3:+61459944 None:intergenic
AAGCTGCTATCCATTCTTCT+TGG 0.284198 1_3:-61461974 Msa0130970:CDS
GTTGATTTACTACCAGATTC+TGG 0.284705 1_3:-61461917 Msa0130970:CDS
GGGCTAGGACAGAGCATCTA+AGG 0.287975 1_3:-61458062 Msa0130970:CDS
GTATCAGTTGGTCGAAATTC+AGG 0.292950 1_3:+61466200 None:intergenic
GGTTAGCTAGCTGTAAATTA+AGG 0.293711 1_3:-61457829 Msa0130970:three_prime_UTR
CGCCGTACCCAAAACGCTTC+TGG 0.297279 1_3:+61465791 None:intergenic
TCTCGGTTTGAGAACATTCC+TGG 0.298579 1_3:+61458634 None:intergenic
TGTCACTTCCAAACTGATTC+AGG 0.303320 1_3:-61461725 Msa0130970:CDS
CAAGTTATTCCTCGTGCTTC+AGG 0.304366 1_3:-61465351 Msa0130970:CDS
CTAATATCTGGCCCCAATTC+AGG 0.307902 1_3:+61466035 None:intergenic
TGCTTCTGCAAAGGATTTGC+CGG 0.310347 1_3:-61460852 Msa0130970:CDS
GGGCCAGATATTAGTTCTTT+GGG 0.310595 1_3:-61466026 Msa0130970:CDS
TTCCCCAAATCCCCAATTTA+GGG 0.313493 1_3:-61466390 Msa0130970:five_prime_UTR
AGTATAACCATATCAGAAAT+AGG 0.315470 1_3:-61458783 Msa0130970:CDS
CTTTGGGTGCTGGTAATTCT+TGG 0.316778 1_3:-61466010 Msa0130970:CDS
TAAAGTCATAGCAATCAAAT+TGG 0.320966 1_3:+61458460 None:intergenic
TGTCAGAACAATAAATATTC+TGG 0.322990 1_3:-61459455 Msa0130970:CDS
AAGAGAGATTCTAGTAAAAC+AGG 0.323540 1_3:-61462026 Msa0130970:CDS
TTAGCATACTCCACATAAAT+AGG 0.324402 1_3:+61465711 None:intergenic
TTTCTTCCCAGCATTTGATC+TGG 0.329191 1_3:+61458515 None:intergenic
CTAACCACTTCCAAATGAAT+TGG 0.337520 1_3:+61457780 None:intergenic
AAGACTTGGTACTCCGTTCC+TGG 0.339475 1_3:-61465186 Msa0130970:CDS
TGTAGACTATCCGAAAATAA+AGG 0.339555 1_3:-61460176 Msa0130970:intron
AGGAAAATCCAGTAGCTAAA+AGG 0.341139 1_3:-61458353 Msa0130970:CDS
AGCAGAAAGCTGGTAAATTT+GGG 0.341520 1_3:-61466139 Msa0130970:CDS
ATTTCTTTATCATCATTTAG+AGG 0.342109 1_3:+61459119 None:intergenic
GACGTGCCTGGTTCGGCGTT+TGG 0.346548 1_3:-61465687 Msa0130970:CDS
TTCATTCTCTGAATGTTGTC+AGG 0.348652 1_3:+61459830 None:intergenic
CCTGAGGTAGTTGTTGCATC+TGG 0.348719 1_3:-61463839 Msa0130970:CDS
TTCTACTTCTGGAACCTATA+TGG 0.352611 1_3:-61461867 Msa0130970:CDS
CCTTTCCATGTGCATTTAAA+GGG 0.355632 1_3:+61458111 None:intergenic
ATTAATTTCATTTGTTGTTA+GGG 0.357043 1_3:-61457618 Msa0130970:three_prime_UTR
GGTGGTGATGTTGATCAATT+AGG 0.359563 1_3:-61465117 Msa0130970:intron
ACCAACTGAGAAATTGATAA+TGG 0.362895 1_3:-61461645 Msa0130970:CDS
CAAAGTAGAGTGCGAAATTT+GGG 0.363046 1_3:+61466516 None:intergenic
TGAGGCTTCACAGCCTTCTA+AGG 0.364910 1_3:-61465448 Msa0130970:CDS
TGTGTGGGTTGTGGAATACT+TGG 0.365624 1_3:-61461692 Msa0130970:CDS
TGCTCAATGCCCAATTCATT+TGG 0.366458 1_3:-61457790 Msa0130970:three_prime_UTR
TGCTTACCTTTGAAGAAATT+GGG 0.368539 1_3:+61466417 None:intergenic
TGAATACATGAGTCTTCTTT+GGG 0.371012 1_3:+61458732 None:intergenic
TCTTCAACTAGATGATTATC+AGG 0.371697 1_3:+61461617 None:intergenic
ACATTGGTATGTTGTTTAGT+TGG 0.376959 1_3:-61465272 Msa0130970:CDS
GGCAACCCTTCAAGCCAATT+GGG 0.379995 1_3:+61466230 None:intergenic
ATCTTTGAGATATAAGCAAT+TGG 0.382855 1_3:+61466164 None:intergenic
GAGCATCTAAGGGTGCATAC+TGG 0.383899 1_3:-61458051 Msa0130970:CDS
TGGCAACCCTTCAAGCCAAT+TGG 0.386954 1_3:+61466229 None:intergenic
TAGACTTCTAGCGTTATTAG+AGG 0.391254 1_3:-61457760 Msa0130970:three_prime_UTR
CACAGAAAGCTCGATCTAAA+AGG 0.392381 1_3:-61459877 Msa0130970:CDS
CATGTGTCCATAAGCAAGTT+TGG 0.392827 1_3:-61465869 Msa0130970:CDS
ATTTGACATGTCCGCCATAT+AGG 0.394452 1_3:+61461853 None:intergenic
TGCTGGTAATTCTTGGAAAA+CGG 0.395089 1_3:-61466003 Msa0130970:CDS
AAGTAAGTCTTTGACTGAAA+TGG 0.395480 1_3:-61459150 Msa0130970:CDS
GAAGGCTGTGAAGCCTCATT+TGG 0.397557 1_3:+61465453 None:intergenic
AGAAACTGCTTCAATATTCA+AGG 0.398497 1_3:-61459763 Msa0130970:CDS
CTAGCTAACCAGAATGCTTA+TGG 0.400628 1_3:+61457842 None:intergenic
TCCTCATCAACTCTAGTAAT+GGG 0.401920 1_3:+61458672 None:intergenic
GCAGAAGCATAAAGCTCTCT+TGG 0.402187 1_3:+61459059 None:intergenic
AAATTTGGCTTTGATAGATC+TGG 0.402588 1_3:-61460074 Msa0130970:CDS
CCAATTCAGGCCGCTTCAAA+AGG 0.403868 1_3:+61466048 None:intergenic
CTTCCATAATACAGTAAACT+TGG 0.404160 1_3:-61459033 Msa0130970:CDS
ATTCTTGGAAAACGGGTTCT+GGG 0.404488 1_3:-61465995 Msa0130970:CDS
AGCATCTAAGGGTGCATACT+GGG 0.404544 1_3:-61458050 Msa0130970:CDS
TACACTAGTAAGCTGTAAAC+AGG 0.404878 1_3:+61457522 None:intergenic
GGTGGCAGAGAAAATGTAAA+TGG 0.408244 1_3:-61458603 Msa0130970:CDS
CCAATGCTCCTGAATCAGTT+TGG 0.409699 1_3:+61461717 None:intergenic
CAACATACCAATGTATATCA+TGG 0.410757 1_3:+61465281 None:intergenic
TGGCGATATTTGCCAGAATC+TGG 0.411094 1_3:+61461905 None:intergenic
CCCTCAACCTTACATTGATA+AGG 0.411482 1_3:+61458021 None:intergenic
TTGATAGATCTGGCAATTGA+TGG 0.412000 1_3:-61460064 Msa0130970:CDS
TGCTAATGACGTGCCTGGTT+CGG 0.412477 1_3:-61465694 Msa0130970:CDS
GCATTGGTTTGTGTGGGTTG+TGG 0.412625 1_3:-61461701 Msa0130970:CDS
TCTGAAATCATCTCCTTAGA+AGG 0.412686 1_3:+61465435 None:intergenic
TGTGATAACTTAGATTTAGA+TGG 0.413591 1_3:-61459356 Msa0130970:CDS
ACACCAGGTAATAGTGTTCT+TGG 0.413876 1_3:+61462085 None:intergenic
GTCATCGAAGGCAACGGAAA+AGG 0.422246 1_3:-61465638 Msa0130970:CDS
TTCTTCCCAGCATTTGATCT+GGG 0.423011 1_3:+61458516 None:intergenic
AAAGCAAAGGCATAATTTCC+AGG 0.424207 1_3:+61465168 None:intergenic
TGTGGGGAGGCTGCTAACTT+TGG 0.426461 1_3:-61462710 Msa0130970:CDS
TGTTGTTTAGTTGGTTTGCC+TGG 0.426727 1_3:-61465263 Msa0130970:CDS
AATGAAGGATGATCAATTGC+AGG 0.426909 1_3:-61459813 Msa0130970:CDS
ACAGAGAAACAACTTTGCTT+TGG 0.427172 1_3:+61459728 None:intergenic
GGAGTCTTCAAAGCAGAGTC+TGG 0.427940 1_3:-61458871 Msa0130970:CDS
CATCTGGGATTCCTTGCTGC+AGG 0.429913 1_3:-61463823 Msa0130970:intron
GAAATCCCCAATTGGCTTGA+AGG 0.430083 1_3:-61466236 Msa0130970:CDS
AGCAGGCACAGGCGGAAAAC+AGG 0.431896 1_3:-61457964 Msa0130970:CDS
TATCTCTTCTGCAACTGCCC+TGG 0.435108 1_3:+61460147 None:intergenic
GCTGGTAATTCTTGGAAAAC+GGG 0.437570 1_3:-61466002 Msa0130970:CDS
TGCTAACCCTTTCTTCGGCC+TGG 0.438829 1_3:+61459207 None:intergenic
CCATGTCATTCAAGTGGTCA+TGG 0.439817 1_3:-61458083 Msa0130970:CDS
GTGGGGAGGCTGCTAACTTT+GGG 0.443634 1_3:-61462709 Msa0130970:CDS
AGAATTGCTAACCCTTTCTT+CGG 0.444382 1_3:+61459202 None:intergenic
CCACAGTAGCGAGAGCAGTT+TGG 0.444635 1_3:+61459258 None:intergenic
CCAAACTGATTCAGGAGCAT+TGG 0.446262 1_3:-61461717 Msa0130970:CDS
GGAAGCTTTCAAATAGTCCT+TGG 0.448245 1_3:-61465380 Msa0130970:CDS
TCTGGGGATGCAATATCCAT+TGG 0.451020 1_3:+61460097 None:intergenic
ACATGAGTCTTCTTTGGGAC+AGG 0.452410 1_3:+61458737 None:intergenic
GATATTAGTTCTTTGGGTGC+TGG 0.455358 1_3:-61466020 Msa0130970:CDS
AATCCTACATGATAAGCTCT+TGG 0.455827 1_3:+61463597 None:intergenic
CTGAGGTAGTTGTTGCATCT+GGG 0.455880 1_3:-61463838 Msa0130970:CDS
CGAAAATAAAGGCACATGCC+AGG 0.458389 1_3:-61460165 Msa0130970:CDS
TTCATGCCAGATGATATTCC+TGG 0.459210 1_3:-61465315 Msa0130970:CDS
TATTCTGGCTCACTTACAAA+TGG 0.459824 1_3:-61459440 Msa0130970:CDS
CATTCAAGTGGTCATGGGCT+AGG 0.460298 1_3:-61458077 Msa0130970:CDS
TACTACAAGGCAACAGGAAG+TGG 0.460339 1_3:-61465937 Msa0130970:CDS
TCCATTATCAATTTCTCAGT+TGG 0.460695 1_3:+61461644 None:intergenic
GTCATCCGCACAGAGGGTTA+TGG 0.461806 1_3:-61465138 Msa0130970:CDS
TTTGAAGGCTTGGGCAATGG+TGG 0.462057 1_3:+61466101 None:intergenic
CGAGGAACTGAAGCTTCGGC+AGG 0.462685 1_3:+61458321 None:intergenic
GCACCCAAAGAACTAATATC+TGG 0.464511 1_3:+61466023 None:intergenic
CGTGTTTACTACAAGGCAAC+AGG 0.465200 1_3:-61465943 Msa0130970:CDS
GGAGCATGCTGTTCAGGTTG+TGG 0.466494 1_3:-61460756 Msa0130970:CDS
TGGTTGTAGAGGCCATGTTT+TGG 0.466623 1_3:-61465752 Msa0130970:CDS
AGTTGGAGAAAGTGGCGAAC+AGG 0.469224 1_3:-61458985 Msa0130970:CDS
AGTATTCCCAATTTCTTCAA+AGG 0.473480 1_3:-61466423 Msa0130970:five_prime_UTR
TGTGCATATGTCATATAGTA+AGG 0.478288 1_3:-61457879 Msa0130970:three_prime_UTR
TCTCTCTTTCTTCTTTCTGA+CGG 0.478936 1_3:+61462041 None:intergenic
TTCCTCATCAACTCTAGTAA+TGG 0.480378 1_3:+61458671 None:intergenic
ATTTATTGTTCTGACAATCC+TGG 0.480717 1_3:+61459462 None:intergenic
GGCGAAGGATGTTTCTCCAT+TGG 0.480903 1_3:-61465772 Msa0130970:CDS
AACACGATTCTGCATGACTT+GGG 0.483343 1_3:+61465517 None:intergenic
TTAATAACCAGGCCGAAGAA+AGG 0.485006 1_3:-61459214 Msa0130970:CDS
TTGCTACAGGCAAAAGTGTA+GGG 0.485030 1_3:-61458395 Msa0130970:CDS
GGTTAAGCAAAATAGCGAAA+TGG 0.485694 1_3:+61466460 None:intergenic
CACTTGAGACTGCACTATGA+AGG 0.489576 1_3:+61461570 None:intergenic
GTTGATTTGTCACAAGATGA+TGG 0.492026 1_3:-61458573 Msa0130970:CDS
AAGGACTGATTATAAGAGTA+GGG 0.492783 1_3:-61465619 Msa0130970:CDS
TTTCCAAGAGCTTATCATGT+AGG 0.493613 1_3:-61463600 Msa0130970:CDS
GCAAGTAAAGCAGTTGCTGA+TGG 0.493864 1_3:+61462612 None:intergenic
TGTTTGTAAAGAAACTGAAA+TGG 0.495743 1_3:-61465586 Msa0130970:CDS
TAGAAGCTAAATCAGACAAC+TGG 0.497172 1_3:+61461885 None:intergenic
GATTCCTCTCTGAACTCTGT+TGG 0.497914 1_3:-61461596 Msa0130970:CDS
TAACCACTTCCAAATGAATT+GGG 0.498461 1_3:+61457781 None:intergenic
CACTCGTTCAATGACTGATC+CGG 0.498733 1_3:+61460833 None:intergenic
CAATTGCAGGAAAGAATTGA+TGG 0.499509 1_3:-61459800 Msa0130970:CDS
TTGATTTGTCACAAGATGAT+GGG 0.499538 1_3:-61458572 Msa0130970:CDS
TAATAACCAGGCCGAAGAAA+GGG 0.499765 1_3:-61459213 Msa0130970:CDS
CTTGCGAGGAACTGAAGCTT+CGG 0.502058 1_3:+61458317 None:intergenic
GCCTTATCAATGTAAGGTTG+AGG 0.502406 1_3:-61458022 Msa0130970:CDS
TGAACGAGTGCAATAAATGT+TGG 0.502758 1_3:-61460820 Msa0130970:CDS
TTCGGCGTTTGGAGAATCAC+AGG 0.504268 1_3:-61465676 Msa0130970:CDS
AACTTGATGAATGTGAAGAT+TGG 0.506062 1_3:-61460036 Msa0130970:CDS
GTGCAACTGTAACTCAGCCT+TGG 0.506411 1_3:+61458227 None:intergenic
GAACGACAAGTTGGAGAAAG+TGG 0.507919 1_3:-61458993 Msa0130970:CDS
TCTTTGAGATATAAGCAATT+GGG 0.508742 1_3:+61466165 None:intergenic
AATGATATGCAAGGCACTGC+TGG 0.508938 1_3:-61465405 Msa0130970:CDS
TGTAAACAGGACTATGTAAG+AGG 0.512083 1_3:+61457535 None:intergenic
GTATCTAGTTATGTTGCAAA+AGG 0.512305 1_3:-61458816 Msa0130970:CDS
TTCAGGAGCATTGGTTTGTG+TGG 0.513204 1_3:-61461708 Msa0130970:CDS
CCTTATCAATGTAAGGTTGA+GGG 0.513587 1_3:-61458021 Msa0130970:CDS
CGCACCCTTCATGTGGGCAA+AGG 0.514323 1_3:+61458196 None:intergenic
CCCTTTAAATGCACATGGAA+AGG 0.514499 1_3:-61458111 Msa0130970:CDS
ATGCCCAATTCATTTGGAAG+TGG 0.515269 1_3:-61457784 Msa0130970:three_prime_UTR
AAAGGACTGATTATAAGAGT+AGG 0.515773 1_3:-61465620 Msa0130970:CDS
TTCTGAACTTGCTTCTGCAA+AGG 0.515774 1_3:-61460861 Msa0130970:CDS
CAGTTCTATGATAAACGTCC+TGG 0.515832 1_3:-61459920 Msa0130970:CDS
TCAAAGATTGAGCAGAAAGC+TGG 0.517124 1_3:-61466149 Msa0130970:CDS
GAAGTCCGTGTGAGAGGCTG+AGG 0.517924 1_3:-61458434 Msa0130970:CDS
AACTTAGATTTAGATGGTGA+AGG 0.518157 1_3:-61459350 Msa0130970:CDS
AAACACGATTCTGCATGACT+TGG 0.518199 1_3:+61465516 None:intergenic
TGTTGATTGCATGTACTTGA+AGG 0.520047 1_3:-61457692 Msa0130970:three_prime_UTR
TTTGGGACTCCACAATGGCT+TGG 0.520154 1_3:-61462692 Msa0130970:CDS
TTGGCTTGAAGGGTTGCCAC+TGG 0.520642 1_3:-61466225 Msa0130970:CDS
AATCTGACTGATTCAGATGT+TGG 0.520844 1_3:-61461764 Msa0130970:CDS
CGCGGGCCGTGTTTACTACA+AGG 0.522312 1_3:-61465950 Msa0130970:CDS
GTCAACATCTACACCAAATG+AGG 0.522577 1_3:-61465466 Msa0130970:CDS
TTCTTACCGCACCCTTCATG+TGG 0.522892 1_3:+61458189 None:intergenic
TCTGGGGATAGTAGTAATGA+TGG 0.523983 1_3:-61465978 Msa0130970:CDS
TTGGTTTGCCTGGCATGTAG+AGG 0.524331 1_3:-61465253 Msa0130970:CDS
TCTAGGTTAGTACAGAATCC+TGG 0.524538 1_3:-61463639 Msa0130970:intron
ACACAAAATAATGAGTCTAA+AGG 0.525354 1_3:-61465549 Msa0130970:CDS
CAATGTAAGGTTGAGGGCTG+CGG 0.525486 1_3:-61458015 Msa0130970:CDS
GGAGAAGCCTTATCAATGTA+AGG 0.525496 1_3:-61458028 Msa0130970:CDS
AACTCATACGGCAATTATCA+AGG 0.525770 1_3:+61458256 None:intergenic
GTAACACCAGGAATATCATC+TGG 0.527491 1_3:+61465309 None:intergenic
AAATCCCCAATTGGCTTGAA+GGG 0.528256 1_3:-61466235 Msa0130970:CDS
TTCAGAGAAGCCTATTTATG+TGG 0.528434 1_3:-61465721 Msa0130970:CDS
ACTGCTCTCGCTACTGTGGA+TGG 0.528809 1_3:-61459254 Msa0130970:CDS
CATAAGCAAGTTTGGCAAAG+TGG 0.530953 1_3:-61465861 Msa0130970:CDS
CATCAACTCTAGTAATGGGT+TGG 0.531454 1_3:+61458676 None:intergenic
TCAGGAGCATTGGTTTGTGT+GGG 0.532536 1_3:-61461707 Msa0130970:CDS
TTCTGGATTTCATTATGCAA+TGG 0.532881 1_3:+61459548 None:intergenic
GTCACAAGATGATGGGGAGC+TGG 0.534782 1_3:-61458565 Msa0130970:CDS
AATCTTCAAACAGACCTGAA+TGG 0.537072 1_3:+61460690 None:intergenic
ACTTAGATTTAGATGGTGAA+GGG 0.537172 1_3:-61459349 Msa0130970:CDS
TGTTTCTCCATTGGTTGTAG+AGG 0.537971 1_3:-61465763 Msa0130970:CDS
GGTGAATCAATGCGTATTTG+TGG 0.538426 1_3:+61458157 None:intergenic
CGATGAGATGAGTTTGTACA+TGG 0.539507 1_3:-61461789 Msa0130970:CDS
CGTAACCTTTGCCCACATGA+AGG 0.543525 1_3:-61458201 Msa0130970:CDS
AACCCTAAATTGGGGATTTG+GGG 0.544001 1_3:+61466388 None:intergenic
GAAAATAAAGGCACATGCCA+GGG 0.545650 1_3:-61460164 Msa0130970:CDS
CAACTGTAACTCAGCCTTGG+TGG 0.546136 1_3:+61458230 None:intergenic
TTCATGATCCTCTACATGCC+AGG 0.546401 1_3:+61465245 None:intergenic
TGAAAGTCCAATTAATAACC+AGG 0.547043 1_3:-61459225 Msa0130970:CDS
GTAATGCTGAAATCCCCAAT+TGG 0.547243 1_3:-61466244 Msa0130970:CDS
GATTCTCCAAACGCCGAACC+AGG 0.548500 1_3:+61465681 None:intergenic
ATGCAGCAAGAACGACAAGT+TGG 0.550182 1_3:-61459002 Msa0130970:CDS
AACATACCAATGTATATCAT+GGG 0.550555 1_3:+61465282 None:intergenic
GAAGTTCCCAGATCAAATGC+TGG 0.553820 1_3:-61458522 Msa0130970:CDS
TACAAGTGGGGAATATGCAG+AGG 0.554205 1_3:-61458916 Msa0130970:CDS
CAAGTAAAGCAGTTGCTGAT+GGG 0.554412 1_3:+61462613 None:intergenic
GTTTGTAAAGAAACTGAAAT+GGG 0.554656 1_3:-61465585 Msa0130970:CDS
TGATTATAACGAGGTTCCAA+TGG 0.555648 1_3:-61460113 Msa0130970:CDS
CATGTCATTCAAGTGGTCAT+GGG 0.556513 1_3:-61458082 Msa0130970:CDS
CCAGATGCAACAACTACCTC+AGG 0.557532 1_3:+61463839 None:intergenic
AGACGAGAACTGCGCACACC+AGG 0.558625 1_3:+61462070 None:intergenic
TTGAAGGCTTGGGCAATGGT+GGG 0.559074 1_3:+61466102 None:intergenic
TAGTAATGATGGAGTGTCGC+GGG 0.559804 1_3:-61465967 Msa0130970:CDS
AGAACTGAGAAGATTGCTAC+AGG 0.560360 1_3:-61458408 Msa0130970:CDS
ACTTCACCCATGATATACAT+TGG 0.561234 1_3:-61465288 Msa0130970:CDS
ATTGCTACAGGCAAAAGTGT+AGG 0.561753 1_3:-61458396 Msa0130970:CDS
AAACGAGAATATAACTAATG+AGG 0.562704 1_3:-61458844 Msa0130970:CDS
TTGTTTCTCTGTAGCAAGCA+CGG 0.563055 1_3:-61459717 Msa0130970:CDS
GGAACTCTCTACATCAATCC+AGG 0.565169 1_3:-61458652 Msa0130970:CDS
TAATTTCATTTGTTGTTAGG+GGG 0.565301 1_3:-61457616 Msa0130970:three_prime_UTR
AGCGTGTTCATGAGGATGAT+AGG 0.566776 1_3:-61458134 Msa0130970:CDS
GTTATCACACTTGCTACCAA+TGG 0.567211 1_3:+61459370 None:intergenic
TTCTTGGAAAACGGGTTCTG+GGG 0.567841 1_3:-61465994 Msa0130970:CDS
AACATGGCCTCTACAACCAA+TGG 0.568033 1_3:+61465756 None:intergenic
ATATGCAAGGCACTGCTGGT+TGG 0.568262 1_3:-61465401 Msa0130970:CDS
TGAAGCTGCCTTCCAAAACA+TGG 0.568999 1_3:+61465740 None:intergenic
CAATTCAGGCCGCTTCAAAA+GGG 0.571732 1_3:+61466049 None:intergenic
AGTTGCTGATGGGAGAGCAT+AGG 0.571977 1_3:+61462623 None:intergenic
GAGGAAGTCATCCGCACAGA+GGG 0.574609 1_3:-61465144 Msa0130970:CDS
ATCGTAGTCATCGAAGGCAA+CGG 0.575286 1_3:-61465644 Msa0130970:CDS
GAGTTTGAATACTAGTGTCT+CGG 0.575658 1_3:-61459504 Msa0130970:CDS
AGACTTCTAGCGTTATTAGA+GGG 0.576742 1_3:-61457759 Msa0130970:three_prime_UTR
CGAAGCTTCAGTTCCTCGCA+AGG 0.576977 1_3:-61458316 Msa0130970:CDS
CCTTGGTGGTGAAACTCATA+CGG 0.579314 1_3:+61458244 None:intergenic
AAAGAGGAAAATGGAAGACA+CGG 0.580046 1_3:-61458490 Msa0130970:CDS
GTAAAAGGAACTTGTTTACA+TGG 0.580325 1_3:+61459959 None:intergenic
GTGAATCAATGCGTATTTGT+GGG 0.582573 1_3:+61458158 None:intergenic
AGGGGTTGTTCAGAAGTCAA+TGG 0.582930 1_3:-61465892 Msa0130970:CDS
TGACAACATTCAGAGAATGA+AGG 0.583561 1_3:-61459828 Msa0130970:CDS
AACCAAATTACTGAAGCCAT+TGG 0.584646 1_3:-61459386 Msa0130970:CDS
CTGTTGCCTTGTAGTAAACA+CGG 0.586506 1_3:+61465944 None:intergenic
GAGTATGCTAATGACGTGCC+TGG 0.587685 1_3:-61465699 Msa0130970:CDS
AGTATTCAAACTCATACTAG+TGG 0.588281 1_3:+61459514 None:intergenic
CCAAACTGCTCTCGCTACTG+TGG 0.588975 1_3:-61459258 Msa0130970:CDS
TTAATTTCATTTGTTGTTAG+GGG 0.590293 1_3:-61457617 Msa0130970:three_prime_UTR
GCAACCCTTCAAGCCAATTG+GGG 0.592425 1_3:+61466231 None:intergenic
CAATTGTGTGAATCTACAAG+TGG 0.592771 1_3:-61458930 Msa0130970:CDS
TTATAAGAAGTCCGTGTGAG+AGG 0.594372 1_3:-61458440 Msa0130970:CDS
TTAGCTATGCCAAGCCATTG+TGG 0.594643 1_3:+61462683 None:intergenic
CTAACTTTGGGACTCCACAA+TGG 0.595022 1_3:-61462697 Msa0130970:CDS
GTAACCTTTGCCCACATGAA+GGG 0.595791 1_3:-61458200 Msa0130970:CDS
GAGATGTTGCAGAGCAAAGG+TGG 0.596350 1_3:-61460734 Msa0130970:CDS
GATTCACCAGCGTGTTCATG+AGG 0.599558 1_3:-61458142 Msa0130970:CDS
AAGTTCCCAGATCAAATGCT+GGG 0.601275 1_3:-61458521 Msa0130970:CDS
AAAATGCAGCATAGAGAACC+AGG 0.603432 1_3:-61459480 Msa0130970:CDS
ACCCATTACTAGAGTTGATG+AGG 0.603897 1_3:-61458673 Msa0130970:CDS
TCGGAAAATTCAGTATCAGT+TGG 0.606485 1_3:+61466188 None:intergenic
GAATACTATGATGAGGTGAA+AGG 0.607430 1_3:+61466439 None:intergenic
TAGAGGGTGCTGCAGCATGT+TGG 0.607703 1_3:-61457743 Msa0130970:three_prime_UTR
GGAATAACTTGCAGATTCCA+AGG 0.607933 1_3:+61465363 None:intergenic
ATGGCAAATTATAAGCACAT+TGG 0.609580 1_3:+61460709 None:intergenic
AATTGTGTGAATCTACAAGT+GGG 0.610866 1_3:-61458929 Msa0130970:CDS
AGGGGACAACAGCCAAAATG+AGG 0.612546 1_3:-61458376 Msa0130970:CDS
ACTTGAGACTGCACTATGAA+GGG 0.612664 1_3:+61461571 None:intergenic
GTTGTTCCATGTCATTCAAG+TGG 0.612717 1_3:-61458089 Msa0130970:CDS
CCATGACCACTTGAATGACA+TGG 0.613149 1_3:+61458083 None:intergenic
ATCATGGGTGAAGTAACACC+AGG 0.617425 1_3:+61465297 None:intergenic
AAAGGCATAATTTCCAGGAA+CGG 0.617478 1_3:+61465173 None:intergenic
CTTGGCCTCAGCCTCTCACA+CGG 0.617508 1_3:+61458429 None:intergenic
ACTTCACAAACGTCTGCAGT+AGG 0.617757 1_3:+61459083 None:intergenic
GTGCCAAGAACACTATTACC+TGG 0.618321 1_3:-61462088 Msa0130970:CDS
GGCTAGGACAGAGCATCTAA+GGG 0.618405 1_3:-61458061 Msa0130970:CDS
GAAGATTGGACATCTAAACT+AGG 0.618611 1_3:-61460022 Msa0130970:CDS
CTTTGCCCACATGAAGGGTG+CGG 0.619226 1_3:-61458195 Msa0130970:CDS
CTAAACTAGGTCTTAATCTG+CGG 0.620144 1_3:-61460009 Msa0130970:CDS
TGATTTGTCACAAGATGATG+GGG 0.620226 1_3:-61458571 Msa0130970:CDS
GTATTCAAACTCATACTAGT+GGG 0.621009 1_3:+61459515 None:intergenic
ACACGATTCTGCATGACTTG+GGG 0.622776 1_3:+61465518 None:intergenic
TCATCTCATCGAGCAGACAA+TGG 0.623638 1_3:+61461801 None:intergenic
GATGACTTCCTCAAAAGCAA+AGG 0.625253 1_3:+61465155 None:intergenic
ACACTGGCTCATCAAAGACT+TGG 0.625855 1_3:-61465200 Msa0130970:CDS
GAATCAGTTTGGAAGTGACA+TGG 0.626890 1_3:+61461728 None:intergenic
GGGTGCTGCAGCATGTTGGT+TGG 0.628318 1_3:-61457739 Msa0130970:three_prime_UTR
TCATTGAAAGAGACAACTGA+GGG 0.629188 1_3:-61459176 Msa0130970:CDS
TGAGATATAAGCAATTGGGT+CGG 0.629574 1_3:+61466169 None:intergenic
GTGGAGATGTTGCAGAGCAA+AGG 0.630466 1_3:-61460737 Msa0130970:CDS
CCGTATGAGTTTCACCACCA+AGG 0.634300 1_3:-61458244 Msa0130970:CDS
TGCTCCAAGCAGAAAATCCG+TGG 0.637437 1_3:+61460773 None:intergenic
GGTCGAAATTCAGGTGCCAG+TGG 0.638321 1_3:+61466209 None:intergenic
ATAGGCCCTTTAAATGCACA+TGG 0.638974 1_3:-61458116 Msa0130970:CDS
TCACCTTGAAATAAAAGACA+TGG 0.639403 1_3:+61462586 None:intergenic
TCTTACCGCACCCTTCATGT+GGG 0.641304 1_3:+61458190 None:intergenic
ATCCAGTAGCTAAAAGGACA+CGG 0.642114 1_3:-61458347 Msa0130970:CDS
ACTACAAGGCAACAGGAAGT+GGG 0.648096 1_3:-61465936 Msa0130970:CDS
ATCCGCACAGAGGGTTATGG+TGG 0.648464 1_3:-61465135 Msa0130970:CDS
GATGCTGACAATGATATGCA+AGG 0.650720 1_3:-61465414 Msa0130970:CDS
GTCTTTGACTGAAATGGACG+AGG 0.652229 1_3:-61459144 Msa0130970:CDS
TTATCAAGGTCACACTTATG+CGG 0.652852 1_3:+61458270 None:intergenic
TGCTACAGGCAAAAGTGTAG+GGG 0.653624 1_3:-61458394 Msa0130970:CDS
AAAGTCACAACAAATTCACC+AGG 0.656830 1_3:+61463621 None:intergenic
GATTCTGCATGACTTGGGGA+AGG 0.659374 1_3:+61465522 None:intergenic
ACAAGTGGGGAATATGCAGA+GGG 0.659964 1_3:-61458915 Msa0130970:CDS
TAAGCAACTAACCTGCAGCA+AGG 0.661037 1_3:+61463812 None:intergenic
GCATCTAAGGGTGCATACTG+GGG 0.667862 1_3:-61458049 Msa0130970:CDS
AAATTGGGAATACTATGATG+AGG 0.671363 1_3:+61466432 None:intergenic
GGACAACAGCCAAAATGAGG+AGG 0.671631 1_3:-61458373 Msa0130970:CDS
GTAGTAATGATGGAGTGTCG+CGG 0.672073 1_3:-61465968 Msa0130970:CDS
TGCCAATTTAAAGATAAACC+AGG 0.676523 1_3:+61459902 None:intergenic
AGTGATTGTGCATTGTCACG+TGG 0.680404 1_3:-61459593 Msa0130970:CDS
GTTAGTGAGCCTGAAGCACG+AGG 0.681206 1_3:+61465342 None:intergenic
ATTGTGTGAATCTACAAGTG+GGG 0.682641 1_3:-61458928 Msa0130970:CDS
GTCATTGAAAGAGACAACTG+AGG 0.685031 1_3:-61459177 Msa0130970:CDS
TCGGCGTTTGGAGAATCACA+GGG 0.686552 1_3:-61465675 Msa0130970:CDS
TACTTCTGGAACCTATATGG+CGG 0.687140 1_3:-61461864 Msa0130970:CDS
TATCATCCTCATGAACACGC+TGG 0.693927 1_3:+61458136 None:intergenic
TGTAAAGAAACTGAAATGGG+TGG 0.710565 1_3:-61465582 Msa0130970:CDS
CACCACCATAACCCTCTGTG+CGG 0.713502 1_3:+61465133 None:intergenic
AAAGATGAGAGTAACAAACA+AGG 0.723432 1_3:-61457588 Msa0130970:three_prime_UTR
GGAGCCAACAGAGTTCAGAG+AGG 0.726712 1_3:+61461592 None:intergenic
TGAGGAAGTCATCCGCACAG+AGG 0.728883 1_3:-61465145 Msa0130970:CDS
TATCATGTAGGATTCAGCCA+CGG 0.736120 1_3:-61463588 Msa0130970:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTTTCTAAACATATAT+TGG + chr1_3:61458973-61458992 None:intergenic 10.0%
!! TTACATTATATTAATAAAGA+AGG + chr1_3:61463441-61463460 None:intergenic 10.0%
!!! GAAAAAACATATTTTTTTGA+AGG + chr1_3:61457936-61457955 None:intergenic 15.0%
!! AAAATGTCAAAAAAACTAAA+GGG - chr1_3:61458108-61458127 Msa0130970:CDS 15.0%
!! TCAAACAAATCATATTATTA+AGG + chr1_3:61459420-61459439 None:intergenic 15.0%
!! TACTAAAAATTACAAAAGTA+TGG - chr1_3:61459619-61459638 Msa0130970:CDS 15.0%
!!! TTTTTCTTCTTTTTTTGAAA+AGG + chr1_3:61460001-61460020 None:intergenic 15.0%
!! AACACTAAAAACAATATATT+TGG - chr1_3:61460886-61460905 Msa0130970:intron 15.0%
!! ACACTAAAAACAATATATTT+GGG - chr1_3:61460887-61460906 Msa0130970:intron 15.0%
!! ATATAACATTAGTATTCTAT+TGG + chr1_3:61462676-61462695 None:intergenic 15.0%
!! ATAGAATACTAATGTTATAT+AGG - chr1_3:61462676-61462695 Msa0130970:CDS 15.0%
!! ATTGTATATTCATGATATTA+TGG - chr1_3:61463029-61463048 Msa0130970:intron 15.0%
!!! ACATTTGTTAAAAAGTATAT+TGG - chr1_3:61463087-61463106 Msa0130970:intron 15.0%
!! ATAAAAAATCCAATGTTAAA+AGG - chr1_3:61465726-61465745 Msa0130970:CDS 15.0%
!!! TTGAAAATATTCATTCATTT+TGG - chr1_3:61466099-61466118 Msa0130970:CDS 15.0%
!!! TATTAATTTCATTTGTTGTT+AGG - chr1_3:61466400-61466419 Msa0130970:five_prime_UTR 15.0%
!!! ATTAATTTCATTTGTTGTTA+GGG - chr1_3:61466401-61466420 Msa0130970:five_prime_UTR 15.0%
!!! GTACTTTAATTTTTTTTTTG+TGG - chr1_3:61466541-61466560 Msa0130970:five_prime_UTR 15.0%
!!! TTTGATTCTTTTTCATGATA+TGG - chr1_3:61457752-61457771 Msa0130970:three_prime_UTR 20.0%
!!! TTGATTCTTTTTCATGATAT+GGG - chr1_3:61457753-61457772 Msa0130970:three_prime_UTR 20.0%
!! CAAAATGTCAAAAAAACTAA+AGG - chr1_3:61458107-61458126 Msa0130970:CDS 20.0%
!! AAATGTCAAAAAAACTAAAG+GGG - chr1_3:61458109-61458128 Msa0130970:CDS 20.0%
!!! AGATCAAGTCTTTTAATATT+TGG + chr1_3:61459035-61459054 None:intergenic 20.0%
!! AATAGAACAAATATCAAAAC+AGG + chr1_3:61459452-61459471 None:intergenic 20.0%
!! TAACACAAAAGTAAATTAGA+AGG - chr1_3:61459489-61459508 Msa0130970:CDS 20.0%
!! ATAGTTTCTTAAAGAAAACA+TGG - chr1_3:61459566-61459585 Msa0130970:CDS 20.0%
!! TGTAGAAAATATGAAATAGA+AGG - chr1_3:61459592-61459611 Msa0130970:CDS 20.0%
!!! AAAAATTACAAAAGTATGGA+AGG - chr1_3:61459623-61459642 Msa0130970:CDS 20.0%
!!! AAGGTTTTATTTTTAACCTT+TGG + chr1_3:61459982-61460001 None:intergenic 20.0%
!! GAAAAACAAATAAGATGAAT+AGG + chr1_3:61460045-61460064 None:intergenic 20.0%
!! ACAAATACAGTGTAATAAAA+TGG + chr1_3:61460088-61460107 None:intergenic 20.0%
!!! TTTTACACTTTTACTAGAAA+AGG - chr1_3:61461157-61461176 Msa0130970:intron 20.0%
!! TAATTCTTATGTGTACAATA+TGG - chr1_3:61461268-61461287 Msa0130970:intron 20.0%
!!! CTTTTAAGCTTAATTAGTTA+TGG - chr1_3:61461663-61461682 Msa0130970:CDS 20.0%
!! ATTAAACATTAATGTAAGTC+AGG - chr1_3:61461749-61461768 Msa0130970:CDS 20.0%
!!! AATGCTGTTTTTATATTCAA+AGG - chr1_3:61461862-61461881 Msa0130970:CDS 20.0%
!! ACTCCTACAAAAATATTATT+TGG - chr1_3:61462850-61462869 Msa0130970:intron 20.0%
!!! ACACCAAATAATATTTTTGT+AGG + chr1_3:61462856-61462875 None:intergenic 20.0%
!! AATCAGAAATTGTACATATT+TGG + chr1_3:61462998-61463017 None:intergenic 20.0%
!!! TGTTTTTGTTTTGAAAATCT+TGG + chr1_3:61463070-61463089 None:intergenic 20.0%
!! ATTATCATTCTGTTAAAGTT+GGG - chr1_3:61463366-61463385 Msa0130970:intron 20.0%
!! AATACTAGATTCATGATATA+TGG + chr1_3:61463564-61463583 None:intergenic 20.0%
!! AATCTAGTATTGTATGAATA+AGG - chr1_3:61463573-61463592 Msa0130970:intron 20.0%
!! ATTTCTTTATCATCATTTAG+AGG + chr1_3:61464903-61464922 None:intergenic 20.0%
!!! TTAATTTCATTTGTTGTTAG+GGG - chr1_3:61466402-61466421 Msa0130970:five_prime_UTR 20.0%
!! ATTCTGAAAAACCCTAAATT+GGG + chr1_3:61457643-61457662 None:intergenic 25.0%
!! AATTCTGAAAAACCCTAAAT+TGG + chr1_3:61457644-61457663 None:intergenic 25.0%
!!! TCTTTGAGATATAAGCAATT+GGG + chr1_3:61457857-61457876 None:intergenic 25.0%
!!! ATCTTTGAGATATAAGCAAT+TGG + chr1_3:61457858-61457877 None:intergenic 25.0%
!!! ACATATTTTTTTGAAGGCTT+GGG + chr1_3:61457930-61457949 None:intergenic 25.0%
!!! AACATATTTTTTTGAAGGCT+TGG + chr1_3:61457931-61457950 None:intergenic 25.0%
! TGTTTGTAAAGAAACTGAAA+TGG - chr1_3:61458433-61458452 Msa0130970:CDS 25.0%
! GTTTGTAAAGAAACTGAAAT+GGG - chr1_3:61458434-61458453 Msa0130970:CDS 25.0%
! ACACAAAATAATGAGTCTAA+AGG - chr1_3:61458470-61458489 Msa0130970:CDS 25.0%
! AACATACCAATGTATATCAT+GGG + chr1_3:61458740-61458759 None:intergenic 25.0%
! TAGAAAAAATTTCGCATCTA+TGG - chr1_3:61458982-61459001 Msa0130970:CDS 25.0%
! AAAGACTTGATCTGTATATT+TGG - chr1_3:61459042-61459061 Msa0130970:CDS 25.0%
! TTCTTATATTTCCTAGCAAA+TGG - chr1_3:61459106-61459125 Msa0130970:CDS 25.0%
! CATAATCTTATTCAAAGTGA+TGG + chr1_3:61459172-61459191 None:intergenic 25.0%
!! GAATAAGATTATGTTTTCCA+AGG - chr1_3:61459179-61459198 Msa0130970:CDS 25.0%
!!! CTCATGTGATTTTTGAAAAT+TGG + chr1_3:61459388-61459407 None:intergenic 25.0%
! GAAATAAACATTCCAATTGT+TGG + chr1_3:61459670-61459689 None:intergenic 25.0%
!!! TGTATTACTAGTTTTTTGTG+CGG + chr1_3:61459694-61459713 None:intergenic 25.0%
! AATTAAATAGGCAGTATCAA+TGG + chr1_3:61459927-61459946 None:intergenic 25.0%
!!! GTTTTATTTTTAACCTTTGG+AGG + chr1_3:61459979-61459998 None:intergenic 25.0%
! ACTAATTCAACATAGAGAAT+AGG + chr1_3:61460335-61460354 None:intergenic 25.0%
!! TAGGTTTTTACTCTGTAATA+TGG - chr1_3:61460508-61460527 Msa0130970:intron 25.0%
! AATATATTTGGGAGAAAGTT+CGG - chr1_3:61460898-61460917 Msa0130970:intron 25.0%
! GATGATTATAGAAACTCAAA+TGG - chr1_3:61460938-61460957 Msa0130970:intron 25.0%
! TCAATTAAAATGTTCTAGTG+AGG - chr1_3:61461091-61461110 Msa0130970:intron 25.0%
! TTATATTGAAGATTGAAGAG+AGG + chr1_3:61461251-61461270 None:intergenic 25.0%
! TGTACAATATGGTGAAATAA+AGG - chr1_3:61461279-61461298 Msa0130970:intron 25.0%
!!! TGAAATAAAGGTTTTAACTG+TGG - chr1_3:61461291-61461310 Msa0130970:intron 25.0%
!!! GAAATAAAGGTTTTAACTGT+GGG - chr1_3:61461292-61461311 Msa0130970:intron 25.0%
!!! AAATAAAGGTTTTAACTGTG+GGG - chr1_3:61461293-61461312 Msa0130970:intron 25.0%
! ATGTTATATTCTCATTCCTA+TGG - chr1_3:61461492-61461511 Msa0130970:intron 25.0%
! AATAGTTGAAAGGAAAATAG+AGG + chr1_3:61461532-61461551 None:intergenic 25.0%
!! CTATTTTCCTTTCAACTATT+TGG - chr1_3:61461532-61461551 Msa0130970:intron 25.0%
!! ATGGATTATGTTTAATGACA+TGG - chr1_3:61461584-61461603 Msa0130970:CDS 25.0%
! ATTATGTTTAATGACATGGA+TGG - chr1_3:61461588-61461607 Msa0130970:CDS 25.0%
! TTATGTTTAATGACATGGAT+GGG - chr1_3:61461589-61461608 Msa0130970:CDS 25.0%
! CATATAAAGTAGAGTTGTTT+GGG - chr1_3:61461711-61461730 Msa0130970:CDS 25.0%
! ATATAAAGTAGAGTTGTTTG+GGG - chr1_3:61461712-61461731 Msa0130970:CDS 25.0%
!!! CTACTAAAGAAGTTGTTTTA+TGG - chr1_3:61462076-61462095 Msa0130970:CDS 25.0%
! GGTTGTATTAATGTCATAAA+TGG + chr1_3:61462357-61462376 None:intergenic 25.0%
! AACATTAGTATTCTATTGGT+TGG + chr1_3:61462672-61462691 None:intergenic 25.0%
! AGTATATTTGAATTGTGAAG+TGG - chr1_3:61462770-61462789 Msa0130970:intron 25.0%
! GCTATAATGATATATTGCAT+TGG - chr1_3:61462792-61462811 Msa0130970:intron 25.0%
! TTTCATTCAATCATGAGATA+AGG + chr1_3:61462955-61462974 None:intergenic 25.0%
! CATGATTGAATGAAAATGAA+TGG - chr1_3:61462960-61462979 Msa0130970:intron 25.0%
! CATTATCATTCTGTTAAAGT+TGG - chr1_3:61463365-61463384 Msa0130970:intron 25.0%
! TCTTTATTGAATCTTGCAAT+AGG - chr1_3:61463505-61463524 Msa0130970:intron 25.0%
! AAAGTAGTTTAGATGATCTT+AGG - chr1_3:61463530-61463549 Msa0130970:intron 25.0%
! AAAACTTAGACAGAATAATC+TGG + chr1_3:61463653-61463672 None:intergenic 25.0%
! ATCAACAAATGACATATAGA+TGG + chr1_3:61463737-61463756 None:intergenic 25.0%
! TGTCAGAACAATAAATATTC+TGG - chr1_3:61464564-61464583 Msa0130970:intron 25.0%
! TGTGATAACTTAGATTTAGA+TGG - chr1_3:61464663-61464682 Msa0130970:intron 25.0%
!! CATTAGTTATATTCTCGTTT+TGG + chr1_3:61465175-61465194 None:intergenic 25.0%
! AAACGAGAATATAACTAATG+AGG - chr1_3:61465175-61465194 Msa0130970:CDS 25.0%
! AGTATAACCATATCAGAAAT+AGG - chr1_3:61465236-61465255 Msa0130970:CDS 25.0%
! TTCGAATACTGAAAAGAAAA+TGG - chr1_3:61465316-61465335 Msa0130970:CDS 25.0%
! GAAGAAAAAAAAGAGGAAAA+TGG - chr1_3:61465520-61465539 Msa0130970:CDS 25.0%
! TAAAGTCATAGCAATCAAAT+TGG + chr1_3:61465562-61465581 None:intergenic 25.0%
!!! ATGAATGAATATTTTCAAGC+AGG + chr1_3:61466097-61466116 None:intergenic 25.0%
!!! TAGTTCTTTTAAGTCTTCAT+TGG - chr1_3:61466350-61466369 Msa0130970:five_prime_UTR 25.0%
!!! TAATTTCATTTGTTGTTAGG+GGG - chr1_3:61466403-61466422 Msa0130970:five_prime_UTR 25.0%
AAATTGGGAATACTATGATG+AGG + chr1_3:61457590-61457609 None:intergenic 30.0%
AGTATTCCCAATTTCTTCAA+AGG - chr1_3:61457596-61457615 Msa0130970:three_prime_UTR 30.0%
! TGCTTACCTTTGAAGAAATT+GGG + chr1_3:61457605-61457624 None:intergenic 30.0%
! TTGCTTACCTTTGAAGAAAT+TGG + chr1_3:61457606-61457625 None:intergenic 30.0%
! TTCTGAAAAACCCTAAATTG+GGG + chr1_3:61457642-61457661 None:intergenic 30.0%
TTAGCATACTCCACATAAAT+AGG + chr1_3:61458311-61458330 None:intergenic 30.0%
! AATTTTATCGTAGTCATCGA+AGG - chr1_3:61458369-61458388 Msa0130970:CDS 30.0%
AAAGGACTGATTATAAGAGT+AGG - chr1_3:61458399-61458418 Msa0130970:CDS 30.0%
AAGGACTGATTATAAGAGTA+GGG - chr1_3:61458400-61458419 Msa0130970:CDS 30.0%
CAACATACCAATGTATATCA+TGG + chr1_3:61458741-61458760 None:intergenic 30.0%
! ACATTGGTATGTTGTTTAGT+TGG - chr1_3:61458747-61458766 Msa0130970:CDS 30.0%
!! AAATTATGCCTTTGCTTTTG+AGG - chr1_3:61458856-61458875 Msa0130970:CDS 30.0%
!! ATTCAAAGTGATGGATATTG+AGG + chr1_3:61459163-61459182 None:intergenic 30.0%
TCCAAGGATGATAAAGTAAT+TGG - chr1_3:61459195-61459214 Msa0130970:CDS 30.0%
TAAGAATGTGTGAATTCTCT+TGG - chr1_3:61459286-61459305 Msa0130970:CDS 30.0%
TATTCTTAGAAATCGTGGTT+GGG + chr1_3:61459815-61459834 None:intergenic 30.0%
ATAGGTATTCTTAGAAATCG+TGG + chr1_3:61459820-61459839 None:intergenic 30.0%
AATTTGTCAAACACAGATGA+AGG - chr1_3:61459873-61459892 Msa0130970:CDS 30.0%
TATTTAATTCCCGTACTGTA+CGG - chr1_3:61459938-61459957 Msa0130970:CDS 30.0%
TTATGCTGTTATGTCATGAA+TGG - chr1_3:61460239-61460258 Msa0130970:intron 30.0%
! TATTGTTTGAGATCCATAGT+TGG - chr1_3:61460290-61460309 Msa0130970:intron 30.0%
ATTAGTAATAATATCCGTGC+CGG - chr1_3:61460349-61460368 Msa0130970:intron 30.0%
ACAGTATTCTGCAAAATATC+AGG + chr1_3:61460483-61460502 None:intergenic 30.0%
!!! AATGACACGACATTTTTTCA+AGG - chr1_3:61460703-61460722 Msa0130970:intron 30.0%
!!! ATGACACGACATTTTTTCAA+GGG - chr1_3:61460704-61460723 Msa0130970:intron 30.0%
! CAAGGGTGAAATATGTTTTT+AGG - chr1_3:61460721-61460740 Msa0130970:CDS 30.0%
GCATAAATGAAAATGCTGAT+TGG - chr1_3:61460847-61460866 Msa0130970:CDS 30.0%
ATATATTTGGGAGAAAGTTC+GGG - chr1_3:61460899-61460918 Msa0130970:intron 30.0%
! TAGAAACTCAAATGGTGTTT+TGG - chr1_3:61460946-61460965 Msa0130970:intron 30.0%
TAGTGAGAAAGTGAATAAAG+TGG - chr1_3:61461060-61461079 Msa0130970:intron 30.0%
! ATTTTCCCTTTGTATCTTAG+AGG - chr1_3:61461185-61461204 Msa0130970:intron 30.0%
!! TGACCATGTCTTTTATTTCA+AGG - chr1_3:61461430-61461449 Msa0130970:intron 30.0%
TCACCTTGAAATAAAAGACA+TGG + chr1_3:61461436-61461455 None:intergenic 30.0%
AGATTGTATACAAGTTGTGT+TGG + chr1_3:61461468-61461487 None:intergenic 30.0%
CACAACTTGTATACAATCTA+TGG - chr1_3:61461469-61461488 Msa0130970:intron 30.0%
TCATTCCTATGGAATATGAA+TGG - chr1_3:61461503-61461522 Msa0130970:intron 30.0%
ACTCTACTTTATATGCAGTA+AGG + chr1_3:61461706-61461725 None:intergenic 30.0%
GCATATAAAGTAGAGTTGTT+TGG - chr1_3:61461710-61461729 Msa0130970:CDS 30.0%
AAGAGAGATTCTAGTAAAAC+AGG - chr1_3:61461993-61462012 Msa0130970:CDS 30.0%
ACCAACTGAGAAATTGATAA+TGG - chr1_3:61462374-61462393 Msa0130970:intron 30.0%
TCCATTATCAATTTCTCAGT+TGG + chr1_3:61462378-61462397 None:intergenic 30.0%
TCTTCAACTAGATGATTATC+AGG + chr1_3:61462405-61462424 None:intergenic 30.0%
ATTGTACATTTCTTAGTTCC+TGG - chr1_3:61462644-61462663 Msa0130970:CDS 30.0%
! GTAGGAGTAATTTGACATTT+TGG + chr1_3:61462838-61462857 None:intergenic 30.0%
TGATATTATGGAAGCTGATA+TGG - chr1_3:61463041-61463060 Msa0130970:intron 30.0%
! AGTTATGTTATCTGTTTTCC+AGG - chr1_3:61463123-61463142 Msa0130970:intron 30.0%
! GTTATGTTATCTGTTTTCCA+GGG - chr1_3:61463124-61463143 Msa0130970:intron 30.0%
! TTATGTTATCTGTTTTCCAG+GGG - chr1_3:61463125-61463144 Msa0130970:intron 30.0%
ATGGCAAATTATAAGCACAT+TGG + chr1_3:61463313-61463332 None:intergenic 30.0%
! AACAGAATGATAATGCAAAC+AGG + chr1_3:61463360-61463379 None:intergenic 30.0%
TTGGTGAAATTATAGGGTTT+AGG + chr1_3:61463696-61463715 None:intergenic 30.0%
TAAACCCTATAATTTCACCA+AGG - chr1_3:61463695-61463714 Msa0130970:intron 30.0%
TAGACCTTGGTGAAATTATA+GGG + chr1_3:61463702-61463721 None:intergenic 30.0%
TTAGACCTTGGTGAAATTAT+AGG + chr1_3:61463703-61463722 None:intergenic 30.0%
TTCACCAAGGTCTAATAAAA+AGG - chr1_3:61463708-61463727 Msa0130970:intron 30.0%
! GATTCCTTTTTATTAGACCT+TGG + chr1_3:61463715-61463734 None:intergenic 30.0%
!!! TAATGCATGCTGTGTTTTTT+TGG - chr1_3:61463761-61463780 Msa0130970:intron 30.0%
AAAAAAAAGCAGAATCGTGA+AGG + chr1_3:61463824-61463843 None:intergenic 30.0%
TGTAGACTATCCGAAAATAA+AGG - chr1_3:61463843-61463862 Msa0130970:CDS 30.0%
!! AAGTGCTTTTGATTATAACG+AGG - chr1_3:61463897-61463916 Msa0130970:intron 30.0%
! TATCAAAGCCAAATTTTCTG+GGG + chr1_3:61463941-61463960 None:intergenic 30.0%
! CTATCAAAGCCAAATTTTCT+GGG + chr1_3:61463942-61463961 None:intergenic 30.0%
! TCTATCAAAGCCAAATTTTC+TGG + chr1_3:61463943-61463962 None:intergenic 30.0%
!! AAATTTGGCTTTGATAGATC+TGG - chr1_3:61463945-61463964 Msa0130970:intron 30.0%
AACTTGATGAATGTGAAGAT+TGG - chr1_3:61463983-61464002 Msa0130970:intron 30.0%
! GTAAAAGGAACTTGTTTACA+TGG + chr1_3:61464063-61464082 None:intergenic 30.0%
GTCCTGGTTTATCTTTAAAT+TGG - chr1_3:61464115-61464134 Msa0130970:intron 30.0%
TGCCAATTTAAAGATAAACC+AGG + chr1_3:61464120-61464139 None:intergenic 30.0%
AGAAACTGCTTCAATATTCA+AGG - chr1_3:61464256-61464275 Msa0130970:intron 30.0%
TTCTGGATTTCATTATGCAA+TGG + chr1_3:61464474-61464493 None:intergenic 30.0%
GTATTCAAACTCATACTAGT+GGG + chr1_3:61464507-61464526 None:intergenic 30.0%
AGTATTCAAACTCATACTAG+TGG + chr1_3:61464508-61464527 None:intergenic 30.0%
ATTTATTGTTCTGACAATCC+TGG + chr1_3:61464560-61464579 None:intergenic 30.0%
AACTTAGATTTAGATGGTGA+AGG - chr1_3:61464669-61464688 Msa0130970:intron 30.0%
ACTTAGATTTAGATGGTGAA+GGG - chr1_3:61464670-61464689 Msa0130970:intron 30.0%
! TGTTTTATCTACTGCTTCAT+TGG - chr1_3:61464734-61464753 Msa0130970:intron 30.0%
TGAAAGTCCAATTAATAACC+AGG - chr1_3:61464794-61464813 Msa0130970:intron 30.0%
AAGTAAGTCTTTGACTGAAA+TGG - chr1_3:61464869-61464888 Msa0130970:intron 30.0%
CTTCCATAATACAGTAAACT+TGG - chr1_3:61464986-61465005 Msa0130970:intron 30.0%
CATCCAAGTTTACTGTATTA+TGG + chr1_3:61464992-61465011 None:intergenic 30.0%
!! TTGTTTTGTGGAAATATGAG+TGG + chr1_3:61465072-61465091 None:intergenic 30.0%
!! AGATTCACACAATTGTTTTG+TGG + chr1_3:61465084-61465103 None:intergenic 30.0%
AATTGTGTGAATCTACAAGT+GGG - chr1_3:61465090-61465109 Msa0130970:intron 30.0%
GTATCTAGTTATGTTGCAAA+AGG - chr1_3:61465203-61465222 Msa0130970:CDS 30.0%
!! AGAACATCCTATTTCTGATA+TGG + chr1_3:61465246-61465265 None:intergenic 30.0%
TGAATACATGAGTCTTCTTT+GGG + chr1_3:61465290-61465309 None:intergenic 30.0%
TTGAATACATGAGTCTTCTT+TGG + chr1_3:61465291-61465310 None:intergenic 30.0%
!! TTGATTTGTCACAAGATGAT+GGG - chr1_3:61465447-61465466 Msa0130970:CDS 30.0%
ATGACATATGCACATGTTAT+AGG + chr1_3:61466134-61466153 None:intergenic 30.0%
TGTGCATATGTCATATAGTA+AGG - chr1_3:61466140-61466159 Msa0130970:CDS 30.0%
TAACCACTTCCAAATGAATT+GGG + chr1_3:61466241-61466260 None:intergenic 30.0%
AAAGATGAGAGTAACAAACA+AGG - chr1_3:61466431-61466450 Msa0130970:five_prime_UTR 30.0%
CAAAGTAGAGTGCGAAATTT+GGG + chr1_3:61457506-61457525 None:intergenic 35.0%
GGTTAAGCAAAATAGCGAAA+TGG + chr1_3:61457562-61457581 None:intergenic 35.0%
GAATACTATGATGAGGTGAA+AGG + chr1_3:61457583-61457602 None:intergenic 35.0%
AAACCCTAAATTGGGGATTT+GGG + chr1_3:61457635-61457654 None:intergenic 35.0%
AAAACCCTAAATTGGGGATT+TGG + chr1_3:61457636-61457655 None:intergenic 35.0%
TCGGAAAATTCAGTATCAGT+TGG + chr1_3:61457834-61457853 None:intergenic 35.0%
TGAGATATAAGCAATTGGGT+CGG + chr1_3:61457853-61457872 None:intergenic 35.0%
AGCAGAAAGCTGGTAAATTT+GGG - chr1_3:61457880-61457899 Msa0130970:three_prime_UTR 35.0%
!! TGAATAAGTCCCTTTTGAAG+CGG - chr1_3:61457961-61457980 Msa0130970:CDS 35.0%
TGCTGGTAATTCTTGGAAAA+CGG - chr1_3:61458016-61458035 Msa0130970:CDS 35.0%
TTCAGAGAAGCCTATTTATG+TGG - chr1_3:61458298-61458317 Msa0130970:CDS 35.0%
TGTAAAGAAACTGAAATGGG+TGG - chr1_3:61458437-61458456 Msa0130970:CDS 35.0%
! TCTGAAATCATCTCCTTAGA+AGG + chr1_3:61458587-61458606 None:intergenic 35.0%
ACTTCACCCATGATATACAT+TGG - chr1_3:61458731-61458750 Msa0130970:CDS 35.0%
! AGCTTGAATTTTCTTCACAC+TGG - chr1_3:61458803-61458822 Msa0130970:CDS 35.0%
! AAAGGCATAATTTCCAGGAA+CGG + chr1_3:61458849-61458868 None:intergenic 35.0%
! AAAGCAAAGGCATAATTTCC+AGG + chr1_3:61458854-61458873 None:intergenic 35.0%
GCCAATTACTTTATCATCCT+TGG + chr1_3:61459199-61459218 None:intergenic 35.0%
TTGGCATAGACTACTTAAGT+TGG + chr1_3:61459221-61459240 None:intergenic 35.0%
TATGCCAATCTATATCGATG+AGG - chr1_3:61459233-61459252 Msa0130970:CDS 35.0%
ATTGCCTCATCGATATAGAT+TGG + chr1_3:61459240-61459259 None:intergenic 35.0%
TTCAGAAAGTAGCCAACAAT+TGG - chr1_3:61459655-61459674 Msa0130970:CDS 35.0%
TACATGTTAGAGTCTCACAT+CGG - chr1_3:61459710-61459729 Msa0130970:CDS 35.0%
CCACTTATAAACACATTGTC+GGG + chr1_3:61459747-61459766 None:intergenic 35.0%
CCCACTTATAAACACATTGT+CGG + chr1_3:61459748-61459767 None:intergenic 35.0%
CCGACAATGTGTTTATAAGT+GGG - chr1_3:61459745-61459764 Msa0130970:CDS 35.0%
CGACAATGTGTTTATAAGTG+GGG - chr1_3:61459746-61459765 Msa0130970:CDS 35.0%
GACAATGTGTTTATAAGTGG+GGG - chr1_3:61459747-61459766 Msa0130970:CDS 35.0%
GTATTCTTAGAAATCGTGGT+TGG + chr1_3:61459816-61459835 None:intergenic 35.0%
GTACAGTACGGGAATTAAAT+AGG + chr1_3:61459939-61459958 None:intergenic 35.0%
ATTTAATTCCCGTACTGTAC+GGG - chr1_3:61459939-61459958 Msa0130970:CDS 35.0%
!! TTTTTAACCTTTGGAGGACT+TGG + chr1_3:61459973-61459992 None:intergenic 35.0%
! AACTACTCTTTTATCACCTG+AGG - chr1_3:61460164-61460183 Msa0130970:CDS 35.0%
AGCAGAAAAAACACCAACTA+TGG + chr1_3:61460306-61460325 None:intergenic 35.0%
ACTAACCTAGAAAGAAACAC+CGG + chr1_3:61460371-61460390 None:intergenic 35.0%
AAAGTCACAACAAATTCACC+AGG + chr1_3:61460401-61460420 None:intergenic 35.0%
TTTCCAAGAGCTTATCATGT+AGG - chr1_3:61460419-61460438 Msa0130970:intron 35.0%
AATCCTACATGATAAGCTCT+TGG + chr1_3:61460425-61460444 None:intergenic 35.0%
AAACTTCAAAGCAATTACCG+TGG + chr1_3:61460451-61460470 None:intergenic 35.0%
TTGCAGAATACTGTTGTTGT+AGG - chr1_3:61460489-61460508 Msa0130970:intron 35.0%
! GTAATATGGAGTGATAATGC+TGG - chr1_3:61460522-61460541 Msa0130970:intron 35.0%
ATTTAGACCTGTTTGGCATA+TGG - chr1_3:61460564-61460583 Msa0130970:intron 35.0%
!!! TGCTTATTTTTTGCTCCTGT+TGG + chr1_3:61460825-61460844 None:intergenic 35.0%
! GGAAAAGAACTTGCTCTAAA+TGG - chr1_3:61461134-61461153 Msa0130970:intron 35.0%
TTGAGTTATACTGTCTTGTG+AGG - chr1_3:61461221-61461240 Msa0130970:intron 35.0%
ACTAGCACCAAATAGTTGAA+AGG + chr1_3:61461542-61461561 None:intergenic 35.0%
TGCAGTAAGGATATTAGCAA+AGG + chr1_3:61461693-61461712 None:intergenic 35.0%
ATTAATGTAAGTCAGGTCTG+AGG - chr1_3:61461756-61461775 Msa0130970:CDS 35.0%
TCTCTCTTTCTTCTTTCTGA+CGG + chr1_3:61461981-61462000 None:intergenic 35.0%
! AGCTTCTTTTCCAAGAAGAA+TGG + chr1_3:61462058-61462077 None:intergenic 35.0%
! GTTGATTTACTACCAGATTC+TGG - chr1_3:61462102-61462121 Msa0130970:intron 35.0%
TAGAAGCTAAATCAGACAAC+TGG + chr1_3:61462137-61462156 None:intergenic 35.0%
! TCTGATTTAGCTTCTACTTC+TGG - chr1_3:61462141-61462160 Msa0130970:intron 35.0%
! AATCTGACTGATTCAGATGT+TGG - chr1_3:61462255-61462274 Msa0130970:intron 35.0%
ATTAGCCACTACATGTATGA+CGG - chr1_3:61462572-61462591 Msa0130970:intron 35.0%
GTGCAGTAAGGACATTAATA+AGG + chr1_3:61462741-61462760 None:intergenic 35.0%
TGAACGAGTGCAATAAATGT+TGG - chr1_3:61463199-61463218 Msa0130970:intron 35.0%
! GTGCTTATAATTTGCCATTC+AGG - chr1_3:61463315-61463334 Msa0130970:intron 35.0%
AATCTTCAAACAGACCTGAA+TGG + chr1_3:61463332-61463351 None:intergenic 35.0%
GAAATTATAGGGTTTAGGCA+GGG + chr1_3:61463691-61463710 None:intergenic 35.0%
TGAAATTATAGGGTTTAGGC+AGG + chr1_3:61463692-61463711 None:intergenic 35.0%
GATTGCAACACATCATACAT+TGG + chr1_3:61463788-61463807 None:intergenic 35.0%
TGATTATAACGAGGTTCCAA+TGG - chr1_3:61463906-61463925 Msa0130970:intron 35.0%
TATTGCATCCCCAGAAAATT+TGG - chr1_3:61463930-61463949 Msa0130970:intron 35.0%
TTGATAGATCTGGCAATTGA+TGG - chr1_3:61463955-61463974 Msa0130970:intron 35.0%
GAAGATTGGACATCTAAACT+AGG - chr1_3:61463997-61464016 Msa0130970:intron 35.0%
CTAAACTAGGTCTTAATCTG+CGG - chr1_3:61464010-61464029 Msa0130970:intron 35.0%
TTCATTCTCTGAATGTTGTC+AGG + chr1_3:61464192-61464211 None:intergenic 35.0%
TGACAACATTCAGAGAATGA+AGG - chr1_3:61464191-61464210 Msa0130970:intron 35.0%
AATGAAGGATGATCAATTGC+AGG - chr1_3:61464206-61464225 Msa0130970:intron 35.0%
CAATTGCAGGAAAGAATTGA+TGG - chr1_3:61464219-61464238 Msa0130970:intron 35.0%
ACAGAGAAACAACTTTGCTT+TGG + chr1_3:61464294-61464313 None:intergenic 35.0%
!! CACATTTTTGGACTTCTCAT+GGG + chr1_3:61464337-61464356 None:intergenic 35.0%
!! ACACATTTTTGGACTTCTCA+TGG + chr1_3:61464338-61464357 None:intergenic 35.0%
! CAAAACAGCTGACACATTTT+TGG + chr1_3:61464349-61464368 None:intergenic 35.0%
GAGTTTGAATACTAGTGTCT+CGG - chr1_3:61464515-61464534 Msa0130970:intron 35.0%
!! TATTCTGGCTCACTTACAAA+TGG - chr1_3:61464579-61464598 Msa0130970:intron 35.0%
GACAAAAATGTCGATGTGTT+TGG - chr1_3:61464606-61464625 Msa0130970:intron 35.0%
AACCAAATTACTGAAGCCAT+TGG - chr1_3:61464633-61464652 Msa0130970:intron 35.0%
TACCAATGGCTTCAGTAATT+TGG + chr1_3:61464638-61464657 None:intergenic 35.0%
AGAATTGCTAACCCTTTCTT+CGG + chr1_3:61464820-61464839 None:intergenic 35.0%
TCATTGAAAGAGACAACTGA+GGG - chr1_3:61464843-61464862 Msa0130970:intron 35.0%
CAATTGTGTGAATCTACAAG+TGG - chr1_3:61465089-61465108 Msa0130970:intron 35.0%
ATTGTGTGAATCTACAAGTG+GGG - chr1_3:61465091-61465110 Msa0130970:intron 35.0%
! ATTGCACGATGAAGTGATTT+TGG - chr1_3:61465127-61465146 Msa0130970:CDS 35.0%
TCCTCATCAACTCTAGTAAT+GGG + chr1_3:61465350-61465369 None:intergenic 35.0%
TTCCTCATCAACTCTAGTAA+TGG + chr1_3:61465351-61465370 None:intergenic 35.0%
TTCTCAAACCGAGAAAAAGA+CGG - chr1_3:61465394-61465413 Msa0130970:CDS 35.0%
!! GTTGATTTGTCACAAGATGA+TGG - chr1_3:61465446-61465465 Msa0130970:CDS 35.0%
! TGATTTGTCACAAGATGATG+GGG - chr1_3:61465448-61465467 Msa0130970:CDS 35.0%
ATGCTGGGAAGAAAAAAAAG+AGG - chr1_3:61465513-61465532 Msa0130970:CDS 35.0%
AAAGAGGAAAATGGAAGACA+CGG - chr1_3:61465529-61465548 Msa0130970:CDS 35.0%
AGGAAAATCCAGTAGCTAAA+AGG - chr1_3:61465666-61465685 Msa0130970:CDS 35.0%
!!! TTGGATTTTTTATCCTTGCG+AGG + chr1_3:61465719-61465738 None:intergenic 35.0%
TTATCAAGGTCACACTTATG+CGG + chr1_3:61465752-61465771 None:intergenic 35.0%
AACTCATACGGCAATTATCA+AGG + chr1_3:61465766-61465785 None:intergenic 35.0%
GTGAATCAATGCGTATTTGT+GGG + chr1_3:61465864-61465883 None:intergenic 35.0%
CCTTTCCATGTGCATTTAAA+GGG + chr1_3:61465911-61465930 None:intergenic 35.0%
ACCTTTCCATGTGCATTTAA+AGG + chr1_3:61465912-61465931 None:intergenic 35.0%
CCTTATCAATGTAAGGTTGA+GGG - chr1_3:61465998-61466017 Msa0130970:CDS 35.0%
!! GGTTCATATCAGATTTTAGC+AGG - chr1_3:61466038-61466057 Msa0130970:CDS 35.0%
! GGTTAGCTAGCTGTAAATTA+AGG - chr1_3:61466190-61466209 Msa0130970:CDS 35.0%
CTAACCACTTCCAAATGAAT+TGG + chr1_3:61466242-61466261 None:intergenic 35.0%
TAGACTTCTAGCGTTATTAG+AGG - chr1_3:61466259-61466278 Msa0130970:exon 35.0%
AGACTTCTAGCGTTATTAGA+GGG - chr1_3:61466260-61466279 Msa0130970:exon 35.0%
! TGTTGATTGCATGTACTTGA+AGG - chr1_3:61466327-61466346 Msa0130970:five_prime_UTR 35.0%
TGTAAACAGGACTATGTAAG+AGG + chr1_3:61466487-61466506 None:intergenic 35.0%
TACACTAGTAAGCTGTAAAC+AGG + chr1_3:61466500-61466519 None:intergenic 35.0%
GCAAAGTAGAGTGCGAAATT+TGG + chr1_3:61457507-61457526 None:intergenic 40.0%
TTTCCCCAAATCCCCAATTT+AGG - chr1_3:61457628-61457647 Msa0130970:three_prime_UTR 40.0%
TTCCCCAAATCCCCAATTTA+GGG - chr1_3:61457629-61457648 Msa0130970:three_prime_UTR 40.0%
AACCCTAAATTGGGGATTTG+GGG + chr1_3:61457634-61457653 None:intergenic 40.0%
GTAATGCTGAAATCCCCAAT+TGG - chr1_3:61457775-61457794 Msa0130970:three_prime_UTR 40.0%
!! AAATCCCCAATTGGCTTGAA+GGG - chr1_3:61457784-61457803 Msa0130970:three_prime_UTR 40.0%
GTATCAGTTGGTCGAAATTC+AGG + chr1_3:61457822-61457841 None:intergenic 40.0%
TCAAAGATTGAGCAGAAAGC+TGG - chr1_3:61457870-61457889 Msa0130970:three_prime_UTR 40.0%
GAGCAGAAAGCTGGTAAATT+TGG - chr1_3:61457879-61457898 Msa0130970:three_prime_UTR 40.0%
!!! TTTTTTGAAGGCTTGGGCAA+TGG + chr1_3:61457924-61457943 None:intergenic 40.0%
! GGGCCAGATATTAGTTCTTT+GGG - chr1_3:61457993-61458012 Msa0130970:CDS 40.0%
GCACCCAAAGAACTAATATC+TGG + chr1_3:61457999-61458018 None:intergenic 40.0%
! GATATTAGTTCTTTGGGTGC+TGG - chr1_3:61457999-61458018 Msa0130970:CDS 40.0%
GCTGGTAATTCTTGGAAAAC+GGG - chr1_3:61458017-61458036 Msa0130970:CDS 40.0%
! AATTCTTGGAAAACGGGTTC+TGG - chr1_3:61458023-61458042 Msa0130970:CDS 40.0%
! ATTCTTGGAAAACGGGTTCT+GGG - chr1_3:61458024-61458043 Msa0130970:CDS 40.0%
TCTGGGGATAGTAGTAATGA+TGG - chr1_3:61458041-61458060 Msa0130970:CDS 40.0%
CTGTTGCCTTGTAGTAAACA+CGG + chr1_3:61458078-61458097 None:intergenic 40.0%
CATGTGTCCATAAGCAAGTT+TGG - chr1_3:61458150-61458169 Msa0130970:CDS 40.0%
! CACTTTGCCAAACTTGCTTA+TGG + chr1_3:61458160-61458179 None:intergenic 40.0%
CATAAGCAAGTTTGGCAAAG+TGG - chr1_3:61458158-61458177 Msa0130970:CDS 40.0%
!!! ACTTTTGCCAGAAGCGTTTT+GGG - chr1_3:61458221-61458240 Msa0130970:CDS 40.0%
! TGTTTCTCCATTGGTTGTAG+AGG - chr1_3:61458256-61458275 Msa0130970:CDS 40.0%
AACACGATTCTGCATGACTT+GGG + chr1_3:61458505-61458524 None:intergenic 40.0%
AAACACGATTCTGCATGACT+TGG + chr1_3:61458506-61458525 None:intergenic 40.0%
GTCAACATCTACACCAAATG+AGG - chr1_3:61458553-61458572 Msa0130970:CDS 40.0%
GATGCTGACAATGATATGCA+AGG - chr1_3:61458605-61458624 Msa0130970:CDS 40.0%
GGAAGCTTTCAAATAGTCCT+TGG - chr1_3:61458639-61458658 Msa0130970:CDS 40.0%
! GGAATAACTTGCAGATTCCA+AGG + chr1_3:61458659-61458678 None:intergenic 40.0%
TTCATGCCAGATGATATTCC+TGG - chr1_3:61458704-61458723 Msa0130970:CDS 40.0%
GTAACACCAGGAATATCATC+TGG + chr1_3:61458713-61458732 None:intergenic 40.0%
!! TGTTGTTTAGTTGGTTTGCC+TGG - chr1_3:61458756-61458775 Msa0130970:CDS 40.0%
GATGACTTCCTCAAAAGCAA+AGG + chr1_3:61458867-61458886 None:intergenic 40.0%
! GGTGGTGATGTTGATCAATT+AGG - chr1_3:61458902-61458921 Msa0130970:CDS 40.0%
! GAATCACAACGCACTTTTCT+TGG + chr1_3:61459072-61459091 None:intergenic 40.0%
ATTTCCTAGCAAATGGCCAA+TGG - chr1_3:61459113-61459132 Msa0130970:CDS 40.0%
TTTCCTAGCAAATGGCCAAT+GGG - chr1_3:61459114-61459133 Msa0130970:CDS 40.0%
!! AAAGTGATGGATATTGAGGC+AGG + chr1_3:61459159-61459178 None:intergenic 40.0%
GAATGTGTGAATTCTCTTGG+TGG - chr1_3:61459289-61459308 Msa0130970:CDS 40.0%
!! GTGAATTCTCTTGGTGGTTT+TGG - chr1_3:61459295-61459314 Msa0130970:CDS 40.0%
CCCGACAATGTGTTTATAAG+TGG - chr1_3:61459744-61459763 Msa0130970:CDS 40.0%
GTCTCGACAATTCAACACAT+AGG + chr1_3:61459838-61459857 None:intergenic 40.0%
!!! CCAGCTGCTTTGAAACTTTT+GGG - chr1_3:61460135-61460154 Msa0130970:CDS 40.0%
TCTAGGTTAGTACAGAATCC+TGG - chr1_3:61460380-61460399 Msa0130970:intron 40.0%
TATCATGTAGGATTCAGCCA+CGG - chr1_3:61460431-61460450 Msa0130970:intron 40.0%
!! GTGTGCTATTTAGACCTGTT+TGG - chr1_3:61460557-61460576 Msa0130970:intron 40.0%
AAGCCCAAAATTCACTACCA+GGG + chr1_3:61460795-61460814 None:intergenic 40.0%
AAAGCCCAAAATTCACTACC+AGG + chr1_3:61460796-61460815 None:intergenic 40.0%
! TTTGCCTCTTTTGACAACTC+TGG + chr1_3:61460989-61461008 None:intergenic 40.0%
TTGACGCTCTTTCACAATAG+CGG + chr1_3:61461017-61461036 None:intergenic 40.0%
CAATGTGAGAAGACCAATAG+AGG - chr1_3:61461034-61461053 Msa0130970:intron 40.0%
TTTCTCACTAGAGCCTCTAT+TGG + chr1_3:61461050-61461069 None:intergenic 40.0%
TGTTCTAGTGAGGAACCTTT+AGG - chr1_3:61461101-61461120 Msa0130970:intron 40.0%
! GAACCTTTAGGAGAAACCAA+CGG - chr1_3:61461113-61461132 Msa0130970:intron 40.0%
!! TTTCCGTTGGTTTCTCCTAA+AGG + chr1_3:61461119-61461138 None:intergenic 40.0%
! TAGAGCAAGTTCTTTTCCGT+TGG + chr1_3:61461132-61461151 None:intergenic 40.0%
!! GTGAGCCTCTAAGATACAAA+GGG + chr1_3:61461193-61461212 None:intergenic 40.0%
!! AGTGAGCCTCTAAGATACAA+AGG + chr1_3:61461194-61461213 None:intergenic 40.0%
!!! TAAAGGTTTTAACTGTGGGG+AGG - chr1_3:61461296-61461315 Msa0130970:intron 40.0%
CAAGTAAAGCAGTTGCTGAT+GGG + chr1_3:61461409-61461428 None:intergenic 40.0%
GGCAACCATTCATATTCCAT+AGG + chr1_3:61461511-61461530 None:intergenic 40.0%
CTCTAACTCTTTGTGATGCA+TGG - chr1_3:61461565-61461584 Msa0130970:CDS 40.0%
ACACCAGGTAATAGTGTTCT+TGG + chr1_3:61461937-61461956 None:intergenic 40.0%
AAGCTGCTATCCATTCTTCT+TGG - chr1_3:61462045-61462064 Msa0130970:CDS 40.0%
CGATGAGATGAGTTTGTACA+TGG - chr1_3:61462230-61462249 Msa0130970:intron 40.0%
GAATCAGTTTGGAAGTGACA+TGG + chr1_3:61462294-61462313 None:intergenic 40.0%
! TGTCACTTCCAAACTGATTC+AGG - chr1_3:61462294-61462313 Msa0130970:intron 40.0%
ACTTGAGACTGCACTATGAA+GGG + chr1_3:61462451-61462470 None:intergenic 40.0%
TAACTCCGTCATACATGTAG+TGG + chr1_3:61462580-61462599 None:intergenic 40.0%
! GTATTCTATTGGTTGGATCC+AGG + chr1_3:61462665-61462684 None:intergenic 40.0%
!! GGACATTAATAAGGTGCTGA+GGG + chr1_3:61462732-61462751 None:intergenic 40.0%
!! AGGACATTAATAAGGTGCTG+AGG + chr1_3:61462733-61462752 None:intergenic 40.0%
ACTGAAGAATCAGTGCAGTA+AGG + chr1_3:61462753-61462772 None:intergenic 40.0%
! TTCTGAACTTGCTTCTGCAA+AGG - chr1_3:61463158-61463177 Msa0130970:intron 40.0%
TGGCTTCAAAAATGTACTGG+AGG + chr1_3:61463229-61463248 None:intergenic 40.0%
!!! CCAGTACATTTTTGAAGCCA+CGG - chr1_3:61463229-61463248 Msa0130970:intron 40.0%
!!! CTGGCATGTGCCTTTATTTT+CGG + chr1_3:61463856-61463875 None:intergenic 40.0%
! GAAAATAAAGGCACATGCCA+GGG - chr1_3:61463855-61463874 Msa0130970:CDS 40.0%
! AGTTCCTTTTACGCTAGCAT+TGG - chr1_3:61464071-61464090 Msa0130970:intron 40.0%
! GTTCCTTTTACGCTAGCATT+GGG - chr1_3:61464072-61464091 Msa0130970:intron 40.0%
! TTCCTTTTACGCTAGCATTG+GGG - chr1_3:61464073-61464092 Msa0130970:intron 40.0%
CAGTTCTATGATAAACGTCC+TGG - chr1_3:61464099-61464118 Msa0130970:intron 40.0%
CACAGAAAGCTCGATCTAAA+AGG - chr1_3:61464142-61464161 Msa0130970:intron 40.0%
! AAGCAGTTTCTTTTCAGCAG+TGG + chr1_3:61464247-61464266 None:intergenic 40.0%
! TTGTTTCTCTGTAGCAAGCA+CGG - chr1_3:61464302-61464321 Msa0130970:intron 40.0%
AGCTTGACACAGACAATTTC+AGG - chr1_3:61464403-61464422 Msa0130970:intron 40.0%
AAAATGCAGCATAGAGAACC+AGG - chr1_3:61464539-61464558 Msa0130970:intron 40.0%
! GTTATCACACTTGCTACCAA+TGG + chr1_3:61464652-61464671 None:intergenic 40.0%
TCTTCGGCCTGGTTATTAAT+TGG + chr1_3:61464804-61464823 None:intergenic 40.0%
TTAATAACCAGGCCGAAGAA+AGG - chr1_3:61464805-61464824 Msa0130970:intron 40.0%
TAATAACCAGGCCGAAGAAA+GGG - chr1_3:61464806-61464825 Msa0130970:intron 40.0%
GTCATTGAAAGAGACAACTG+AGG - chr1_3:61464842-61464861 Msa0130970:intron 40.0%
!! CATCAACTCTAGTAATGGGT+TGG + chr1_3:61465346-61465365 None:intergenic 40.0%
!! ACCCATTACTAGAGTTGATG+AGG - chr1_3:61465346-61465365 Msa0130970:CDS 40.0%
TCTCAAACCGAGAAAAAGAC+GGG - chr1_3:61465395-61465414 Msa0130970:CDS 40.0%
GGTGGCAGAGAAAATGTAAA+TGG - chr1_3:61465416-61465435 Msa0130970:CDS 40.0%
AAGTTCCCAGATCAAATGCT+GGG - chr1_3:61465498-61465517 Msa0130970:CDS 40.0%
TTCTTCCCAGCATTTGATCT+GGG + chr1_3:61465506-61465525 None:intergenic 40.0%
TTTCTTCCCAGCATTTGATC+TGG + chr1_3:61465507-61465526 None:intergenic 40.0%
TTATAAGAAGTCCGTGTGAG+AGG - chr1_3:61465579-61465598 Msa0130970:CDS 40.0%
GTAGCAATCTTCTCAGTTCT+TGG + chr1_3:61465611-61465630 None:intergenic 40.0%
AGAACTGAGAAGATTGCTAC+AGG - chr1_3:61465611-61465630 Msa0130970:CDS 40.0%
! ATTGCTACAGGCAAAAGTGT+AGG - chr1_3:61465623-61465642 Msa0130970:CDS 40.0%
! TTGCTACAGGCAAAAGTGTA+GGG - chr1_3:61465624-61465643 Msa0130970:CDS 40.0%
! CTGGATTTTCCTCCTCATTT+TGG + chr1_3:61465658-61465677 None:intergenic 40.0%
ATCCAGTAGCTAAAAGGACA+CGG - chr1_3:61465672-61465691 Msa0130970:CDS 40.0%
! CTTATGCGGCCTTTTAACAT+TGG + chr1_3:61465738-61465757 None:intergenic 40.0%
GGTGAATCAATGCGTATTTG+TGG + chr1_3:61465865-61465884 None:intergenic 40.0%
ATAGGCCCTTTAAATGCACA+TGG - chr1_3:61465903-61465922 Msa0130970:CDS 40.0%
CCCTTTAAATGCACATGGAA+AGG - chr1_3:61465908-61465927 Msa0130970:CDS 40.0%
GTTGTTCCATGTCATTCAAG+TGG - chr1_3:61465930-61465949 Msa0130970:CDS 40.0%
CATGTCATTCAAGTGGTCAT+GGG - chr1_3:61465937-61465956 Msa0130970:CDS 40.0%
! GGAGAAGCCTTATCAATGTA+AGG - chr1_3:61465991-61466010 Msa0130970:CDS 40.0%
GCCTTATCAATGTAAGGTTG+AGG - chr1_3:61465997-61466016 Msa0130970:CDS 40.0%
CCCTCAACCTTACATTGATA+AGG + chr1_3:61466001-61466020 None:intergenic 40.0%
!! TATCAGATTTTAGCAGGCAC+AGG - chr1_3:61466044-61466063 Msa0130970:CDS 40.0%
CTTTCTGACCATAAGCATTC+TGG - chr1_3:61466169-61466188 Msa0130970:CDS 40.0%
CTAGCTAACCAGAATGCTTA+TGG + chr1_3:61466180-61466199 None:intergenic 40.0%
TGCTCAATGCCCAATTCATT+TGG - chr1_3:61466229-61466248 Msa0130970:CDS 40.0%
ATGCCCAATTCATTTGGAAG+TGG - chr1_3:61466235-61466254 Msa0130970:CDS 40.0%
!! GAAATCCCCAATTGGCTTGA+AGG - chr1_3:61457783-61457802 Msa0130970:three_prime_UTR 45.0%
CAATTCAGGCCGCTTCAAAA+GGG + chr1_3:61457973-61457992 None:intergenic 45.0%
!!! CTTTTGAAGCGGCCTGAATT+GGG - chr1_3:61457972-61457991 Msa0130970:CDS 45.0%
!!! TTTTGAAGCGGCCTGAATTG+GGG - chr1_3:61457973-61457992 Msa0130970:CDS 45.0%
CTAATATCTGGCCCCAATTC+AGG + chr1_3:61457987-61458006 None:intergenic 45.0%
! GGGGCCAGATATTAGTTCTT+TGG - chr1_3:61457992-61458011 Msa0130970:CDS 45.0%
!! CTTTGGGTGCTGGTAATTCT+TGG - chr1_3:61458009-61458028 Msa0130970:CDS 45.0%
! TTCTTGGAAAACGGGTTCTG+GGG - chr1_3:61458025-61458044 Msa0130970:CDS 45.0%
!! GTAGTAATGATGGAGTGTCG+CGG - chr1_3:61458051-61458070 Msa0130970:CDS 45.0%
!! TAGTAATGATGGAGTGTCGC+GGG - chr1_3:61458052-61458071 Msa0130970:CDS 45.0%
CGTGTTTACTACAAGGCAAC+AGG - chr1_3:61458076-61458095 Msa0130970:CDS 45.0%
TACTACAAGGCAACAGGAAG+TGG - chr1_3:61458082-61458101 Msa0130970:CDS 45.0%
ACTACAAGGCAACAGGAAGT+GGG - chr1_3:61458083-61458102 Msa0130970:CDS 45.0%
AGGGGTTGTTCAGAAGTCAA+TGG - chr1_3:61458127-61458146 Msa0130970:CDS 45.0%
!!! GACTTTTGCCAGAAGCGTTT+TGG - chr1_3:61458220-61458239 Msa0130970:CDS 45.0%
AACATGGCCTCTACAACCAA+TGG + chr1_3:61458266-61458285 None:intergenic 45.0%
! TGGTTGTAGAGGCCATGTTT+TGG - chr1_3:61458267-61458286 Msa0130970:CDS 45.0%
!! TGTAGAGGCCATGTTTTGGA+AGG - chr1_3:61458271-61458290 Msa0130970:CDS 45.0%
TGAAGCTGCCTTCCAAAACA+TGG + chr1_3:61458282-61458301 None:intergenic 45.0%
ATCGTAGTCATCGAAGGCAA+CGG - chr1_3:61458375-61458394 Msa0130970:CDS 45.0%
ACACGATTCTGCATGACTTG+GGG + chr1_3:61458504-61458523 None:intergenic 45.0%
!! AATGATATGCAAGGCACTGC+TGG - chr1_3:61458614-61458633 Msa0130970:CDS 45.0%
CAAGTTATTCCTCGTGCTTC+AGG - chr1_3:61458668-61458687 Msa0130970:CDS 45.0%
ATCATGGGTGAAGTAACACC+AGG + chr1_3:61458725-61458744 None:intergenic 45.0%
TTCATGATCCTCTACATGCC+AGG + chr1_3:61458777-61458796 None:intergenic 45.0%
!! ACACTGGCTCATCAAAGACT+TGG - chr1_3:61458819-61458838 Msa0130970:CDS 45.0%
!! GGTTTTGGCACTAGACTTAC+TGG - chr1_3:61459310-61459329 Msa0130970:CDS 45.0%
TCATTGTGTCCACAAACCAC+AGG - chr1_3:61459521-61459540 Msa0130970:CDS 45.0%
CATTGTGTCCACAAACCACA+GGG - chr1_3:61459522-61459541 Msa0130970:CDS 45.0%
GTCTCACATCGGATAAGAGA+TGG - chr1_3:61459721-61459740 Msa0130970:CDS 45.0%
!!! ACCTCACAAGCTGGTTTTGT+GGG - chr1_3:61459778-61459797 Msa0130970:CDS 45.0%
!!! TGGTTTTGTGGGGTTGTGTT+AGG - chr1_3:61459789-61459808 Msa0130970:CDS 45.0%
! CTTTGGAGGACTTGGATGTA+CGG + chr1_3:61459965-61459984 None:intergenic 45.0%
!!! GCCAGCTGCTTTGAAACTTT+TGG - chr1_3:61460134-61460153 Msa0130970:CDS 45.0%
CCCAAAAGTTTCAAAGCAGC+TGG + chr1_3:61460138-61460157 None:intergenic 45.0%
CTGAGGTAGTTGTTGCATCT+GGG - chr1_3:61460181-61460200 Msa0130970:intron 45.0%
TAAGCAACTAACCTGCAGCA+AGG + chr1_3:61460210-61460229 None:intergenic 45.0%
TCATGCACCATATGCCAAAC+AGG + chr1_3:61460574-61460593 None:intergenic 45.0%
ATGAAACCAATGATGCTCCC+TGG - chr1_3:61460775-61460794 Msa0130970:CDS 45.0%
!! TGCTCCCTGGTAGTGAATTT+TGG - chr1_3:61460788-61460807 Msa0130970:CDS 45.0%
!! GCTCCCTGGTAGTGAATTTT+GGG - chr1_3:61460789-61460808 Msa0130970:CDS 45.0%
! CCTCTTTTGACAACTCTGGT+CGG + chr1_3:61460985-61461004 None:intergenic 45.0%
!! CTAACTTTGGGACTCCACAA+TGG - chr1_3:61461322-61461341 Msa0130970:intron 45.0%
TTAGCTATGCCAAGCCATTG+TGG + chr1_3:61461339-61461358 None:intergenic 45.0%
GCAAGTAAAGCAGTTGCTGA+TGG + chr1_3:61461410-61461429 None:intergenic 45.0%
GTGCCAAGAACACTATTACC+TGG - chr1_3:61461931-61461950 Msa0130970:CDS 45.0%
TGGCGATATTTGCCAGAATC+TGG + chr1_3:61462117-61462136 None:intergenic 45.0%
TCATCTCATCGAGCAGACAA+TGG + chr1_3:61462221-61462240 None:intergenic 45.0%
CCAATGCTCCTGAATCAGTT+TGG + chr1_3:61462305-61462324 None:intergenic 45.0%
! CCAAACTGATTCAGGAGCAT+TGG - chr1_3:61462302-61462321 Msa0130970:intron 45.0%
!! TTCAGGAGCATTGGTTTGTG+TGG - chr1_3:61462311-61462330 Msa0130970:intron 45.0%
!! TCAGGAGCATTGGTTTGTGT+GGG - chr1_3:61462312-61462331 Msa0130970:intron 45.0%
! TGTGTGGGTTGTGGAATACT+TGG - chr1_3:61462327-61462346 Msa0130970:intron 45.0%
GATTCCTCTCTGAACTCTGT+TGG - chr1_3:61462423-61462442 Msa0130970:intron 45.0%
CACTTGAGACTGCACTATGA+AGG + chr1_3:61462452-61462471 None:intergenic 45.0%
TTCACAACGAACAGAGCAGA+GGG + chr1_3:61462922-61462941 None:intergenic 45.0%
ATTCACAACGAACAGAGCAG+AGG + chr1_3:61462923-61462942 None:intergenic 45.0%
TCAGAAACAGAAAGATCCCC+TGG + chr1_3:61463144-61463163 None:intergenic 45.0%
TGCTTCTGCAAAGGATTTGC+CGG - chr1_3:61463167-61463186 Msa0130970:intron 45.0%
CACTCGTTCAATGACTGATC+CGG + chr1_3:61463189-61463208 None:intergenic 45.0%
CCGTGGCTTCAAAAATGTAC+TGG + chr1_3:61463232-61463251 None:intergenic 45.0%
TCGTGAAGGTCAGAAGAAAC+TGG + chr1_3:61463810-61463829 None:intergenic 45.0%
! CGAAAATAAAGGCACATGCC+AGG - chr1_3:61463854-61463873 Msa0130970:CDS 45.0%
TCTGGGGATGCAATATCCAT+TGG + chr1_3:61463925-61463944 None:intergenic 45.0%
ATCCCCAATGCTAGCGTAAA+AGG + chr1_3:61464078-61464097 None:intergenic 45.0%
!! TGTGTCAGCTGTTTTGAGTG+CGG - chr1_3:61464353-61464372 Msa0130970:intron 45.0%
AGTGATTGTGCATTGTCACG+TGG - chr1_3:61464426-61464445 Msa0130970:intron 45.0%
GTCTTTGACTGAAATGGACG+AGG - chr1_3:61464875-61464894 Msa0130970:intron 45.0%
ACTTCACAAACGTCTGCAGT+AGG + chr1_3:61464939-61464958 None:intergenic 45.0%
! GCAGAAGCATAAAGCTCTCT+TGG + chr1_3:61464963-61464982 None:intergenic 45.0%
ATGCAGCAAGAACGACAAGT+TGG - chr1_3:61465017-61465036 Msa0130970:intron 45.0%
! GAACGACAAGTTGGAGAAAG+TGG - chr1_3:61465026-61465045 Msa0130970:intron 45.0%
TACAAGTGGGGAATATGCAG+AGG - chr1_3:61465103-61465122 Msa0130970:intron 45.0%
ACAAGTGGGGAATATGCAGA+GGG - chr1_3:61465104-61465123 Msa0130970:intron 45.0%
!! ACATGAGTCTTCTTTGGGAC+AGG + chr1_3:61465285-61465304 None:intergenic 45.0%
GGAACTCTCTACATCAATCC+AGG - chr1_3:61465367-61465386 Msa0130970:CDS 45.0%
! TCTCGGTTTGAGAACATTCC+TGG + chr1_3:61465388-61465407 None:intergenic 45.0%
GAAGTTCCCAGATCAAATGC+TGG - chr1_3:61465497-61465516 Msa0130970:CDS 45.0%
! TGCTACAGGCAAAAGTGTAG+GGG - chr1_3:61465625-61465644 Msa0130970:CDS 45.0%
!! TTCCGTGTCCTTTTAGCTAC+TGG + chr1_3:61465677-61465696 None:intergenic 45.0%
!! CCTTGGTGGTGAAACTCATA+CGG + chr1_3:61465778-61465797 None:intergenic 45.0%
GTAACCTTTGCCCACATGAA+GGG - chr1_3:61465819-61465838 Msa0130970:CDS 45.0%
TATCATCCTCATGAACACGC+TGG + chr1_3:61465886-61465905 None:intergenic 45.0%
AGCGTGTTCATGAGGATGAT+AGG - chr1_3:61465885-61465904 Msa0130970:CDS 45.0%
CCATGACCACTTGAATGACA+TGG + chr1_3:61465939-61465958 None:intergenic 45.0%
CCATGTCATTCAAGTGGTCA+TGG - chr1_3:61465936-61465955 Msa0130970:CDS 45.0%
! AGCATCTAAGGGTGCATACT+GGG - chr1_3:61465969-61465988 Msa0130970:CDS 45.0%
GCAACCCTTCAAGCCAATTG+GGG + chr1_3:61457791-61457810 None:intergenic 50.0%
GGCAACCCTTCAAGCCAATT+GGG + chr1_3:61457792-61457811 None:intergenic 50.0%
TGGCAACCCTTCAAGCCAAT+TGG + chr1_3:61457793-61457812 None:intergenic 50.0%
TTGAAGGCTTGGGCAATGGT+GGG + chr1_3:61457920-61457939 None:intergenic 50.0%
TTTGAAGGCTTGGGCAATGG+TGG + chr1_3:61457921-61457940 None:intergenic 50.0%
CCAATTCAGGCCGCTTCAAA+AGG + chr1_3:61457974-61457993 None:intergenic 50.0%
!!! CCTTTTGAAGCGGCCTGAAT+TGG - chr1_3:61457971-61457990 Msa0130970:CDS 50.0%
!!! TGCCAGAAGCGTTTTGGGTA+CGG - chr1_3:61458226-61458245 Msa0130970:CDS 50.0%
GGCGAAGGATGTTTCTCCAT+TGG - chr1_3:61458247-61458266 Msa0130970:CDS 50.0%
GAGTATGCTAATGACGTGCC+TGG - chr1_3:61458320-61458339 Msa0130970:CDS 50.0%
TGCTAATGACGTGCCTGGTT+CGG - chr1_3:61458325-61458344 Msa0130970:CDS 50.0%
TTCGGCGTTTGGAGAATCAC+AGG - chr1_3:61458343-61458362 Msa0130970:CDS 50.0%
TCGGCGTTTGGAGAATCACA+GGG - chr1_3:61458344-61458363 Msa0130970:CDS 50.0%
GTCATCGAAGGCAACGGAAA+AGG - chr1_3:61458381-61458400 Msa0130970:CDS 50.0%
! GATTCTGCATGACTTGGGGA+AGG + chr1_3:61458500-61458519 None:intergenic 50.0%
GAAGGCTGTGAAGCCTCATT+TGG + chr1_3:61458569-61458588 None:intergenic 50.0%
TGAGGCTTCACAGCCTTCTA+AGG - chr1_3:61458571-61458590 Msa0130970:CDS 50.0%
!! ATATGCAAGGCACTGCTGGT+TGG - chr1_3:61458618-61458637 Msa0130970:CDS 50.0%
!! TTGGTTTGCCTGGCATGTAG+AGG - chr1_3:61458766-61458785 Msa0130970:CDS 50.0%
! AAGACTTGGTACTCCGTTCC+TGG - chr1_3:61458833-61458852 Msa0130970:CDS 50.0%
AGACCCATTGGCCATTTGCT+AGG + chr1_3:61459120-61459139 None:intergenic 50.0%
GATCTGAACAGGAGACCCAT+TGG + chr1_3:61459132-61459151 None:intergenic 50.0%
GATGGATATTGAGGCAGGCA+TGG + chr1_3:61459154-61459173 None:intergenic 50.0%
ATGTTAGTGTCTGTGCCCTG+TGG + chr1_3:61459540-61459559 None:intergenic 50.0%
ACAGGGCACAGACACTAACA+TGG - chr1_3:61459539-61459558 Msa0130970:CDS 50.0%
CAAAACCAGCTTGTGAGGTG+AGG + chr1_3:61459777-61459796 None:intergenic 50.0%
!!! CACCTCACAAGCTGGTTTTG+TGG - chr1_3:61459777-61459796 Msa0130970:CDS 50.0%
!!! CCTCACAAGCTGGTTTTGTG+GGG - chr1_3:61459779-61459798 Msa0130970:CDS 50.0%
CGTACATCCAAGTCCTCCAA+AGG - chr1_3:61459963-61459982 Msa0130970:CDS 50.0%
CCAGATGCAACAACTACCTC+AGG + chr1_3:61460183-61460202 None:intergenic 50.0%
CCTGAGGTAGTTGTTGCATC+TGG - chr1_3:61460180-61460199 Msa0130970:intron 50.0%
CCTAGAAAGAAACACCGGCA+CGG + chr1_3:61460366-61460385 None:intergenic 50.0%
!! TCACTACCAGGGAGCATCAT+TGG + chr1_3:61460784-61460803 None:intergenic 50.0%
TTGGGCTTTCAGATGCCAAC+AGG - chr1_3:61460807-61460826 Msa0130970:CDS 50.0%
CCGACCAGAGTTGTCAAAAG+AGG - chr1_3:61460982-61461001 Msa0130970:intron 50.0%
! TTTGGGACTCCACAATGGCT+TGG - chr1_3:61461327-61461346 Msa0130970:intron 50.0%
! AGTTGCTGATGGGAGAGCAT+AGG + chr1_3:61461399-61461418 None:intergenic 50.0%
!! ACATGGATGGGCTAGTTGAG+TGG - chr1_3:61461601-61461620 Msa0130970:CDS 50.0%
!! CATGGATGGGCTAGTTGAGT+GGG - chr1_3:61461602-61461621 Msa0130970:CDS 50.0%
!! GCATTGGTTTGTGTGGGTTG+TGG - chr1_3:61462318-61462337 Msa0130970:intron 50.0%
AGCAGAGGGTAAATGGCTAG+GGG + chr1_3:61462908-61462927 None:intergenic 50.0%
GAGCAGAGGGTAAATGGCTA+GGG + chr1_3:61462909-61462928 None:intergenic 50.0%
AGAGCAGAGGGTAAATGGCT+AGG + chr1_3:61462910-61462929 None:intergenic 50.0%
CGAACAGAGCAGAGGGTAAA+TGG + chr1_3:61462915-61462934 None:intergenic 50.0%
! GAAGCCACGGATTTTCTGCT+TGG - chr1_3:61463242-61463261 Msa0130970:intron 50.0%
TGCTCCAAGCAGAAAATCCG+TGG + chr1_3:61463249-61463268 None:intergenic 50.0%
GTGGAGATGTTGCAGAGCAA+AGG - chr1_3:61463282-61463301 Msa0130970:intron 50.0%
GAGATGTTGCAGAGCAAAGG+TGG - chr1_3:61463285-61463304 Msa0130970:intron 50.0%
TATCTCTTCTGCAACTGCCC+TGG + chr1_3:61463875-61463894 None:intergenic 50.0%
TAGTGGGAGCTTCAGCATTC+TGG + chr1_3:61464491-61464510 None:intergenic 50.0%
AGTTGGAGAAAGTGGCGAAC+AGG - chr1_3:61465034-61465053 Msa0130970:intron 50.0%
GGAGTCTTCAAAGCAGAGTC+TGG - chr1_3:61465148-61465167 Msa0130970:CDS 50.0%
CAAACCGAGAAAAAGACGGG+TGG - chr1_3:61465398-61465417 Msa0130970:CDS 50.0%
! TCTGCCACCCGTCTTTTTCT+CGG + chr1_3:61465405-61465424 None:intergenic 50.0%
AGGGGACAACAGCCAAAATG+AGG - chr1_3:61465643-61465662 Msa0130970:CDS 50.0%
GGACAACAGCCAAAATGAGG+AGG - chr1_3:61465646-61465665 Msa0130970:CDS 50.0%
CTTGCGAGGAACTGAAGCTT+CGG + chr1_3:61465705-61465724 None:intergenic 50.0%
CCGTATGAGTTTCACCACCA+AGG - chr1_3:61465775-61465794 Msa0130970:CDS 50.0%
CAACTGTAACTCAGCCTTGG+TGG + chr1_3:61465792-61465811 None:intergenic 50.0%
GTGCAACTGTAACTCAGCCT+TGG + chr1_3:61465795-61465814 None:intergenic 50.0%
CGTAACCTTTGCCCACATGA+AGG - chr1_3:61465818-61465837 Msa0130970:CDS 50.0%
TCTTACCGCACCCTTCATGT+GGG + chr1_3:61465832-61465851 None:intergenic 50.0%
TTCTTACCGCACCCTTCATG+TGG + chr1_3:61465833-61465852 None:intergenic 50.0%
GATTCACCAGCGTGTTCATG+AGG - chr1_3:61465877-61465896 Msa0130970:CDS 50.0%
CATTCAAGTGGTCATGGGCT+AGG - chr1_3:61465942-61465961 Msa0130970:CDS 50.0%
! GGCTAGGACAGAGCATCTAA+GGG - chr1_3:61465958-61465977 Msa0130970:CDS 50.0%
! GAGCATCTAAGGGTGCATAC+TGG - chr1_3:61465968-61465987 Msa0130970:CDS 50.0%
! GCATCTAAGGGTGCATACTG+GGG - chr1_3:61465970-61465989 Msa0130970:CDS 50.0%
CAATGTAAGGTTGAGGGCTG+CGG - chr1_3:61466004-61466023 Msa0130970:CDS 50.0%
!! CAGATTTTAGCAGGCACAGG+CGG - chr1_3:61466047-61466066 Msa0130970:CDS 50.0%
! TTGGCTTGAAGGGTTGCCAC+TGG - chr1_3:61457794-61457813 Msa0130970:three_prime_UTR 55.0%
GGTCGAAATTCAGGTGCCAG+TGG + chr1_3:61457813-61457832 None:intergenic 55.0%
!! AAGCGTTTTGGGTACGGCGA+AGG - chr1_3:61458232-61458251 Msa0130970:CDS 55.0%
GATTCTCCAAACGCCGAACC+AGG + chr1_3:61458341-61458360 None:intergenic 55.0%
GTTAGTGAGCCTGAAGCACG+AGG + chr1_3:61458680-61458699 None:intergenic 55.0%
TGAGGAAGTCATCCGCACAG+AGG - chr1_3:61458874-61458893 Msa0130970:CDS 55.0%
GAGGAAGTCATCCGCACAGA+GGG - chr1_3:61458875-61458894 Msa0130970:CDS 55.0%
GTCATCCGCACAGAGGGTTA+TGG - chr1_3:61458881-61458900 Msa0130970:CDS 55.0%
ATCCGCACAGAGGGTTATGG+TGG - chr1_3:61458884-61458903 Msa0130970:CDS 55.0%
CACCACCATAACCCTCTGTG+CGG + chr1_3:61458889-61458908 None:intergenic 55.0%
AGGCAGGCATGGATCTGAAC+AGG + chr1_3:61459143-61459162 None:intergenic 55.0%
TGTCTGTGCCCTGTGGTTTG+TGG + chr1_3:61459533-61459552 None:intergenic 55.0%
GCAATCCTCACCTCACAAGC+TGG - chr1_3:61459769-61459788 Msa0130970:CDS 55.0%
CCCCACAAAACCAGCTTGTG+AGG + chr1_3:61459782-61459801 None:intergenic 55.0%
ATGTACGGCCCGTACAGTAC+GGG + chr1_3:61459950-61459969 None:intergenic 55.0%
GATGTACGGCCCGTACAGTA+CGG + chr1_3:61459951-61459970 None:intergenic 55.0%
! CATCTGGGATTCCTTGCTGC+AGG - chr1_3:61460196-61460215 Msa0130970:intron 55.0%
! CCGTGCCGGTGTTTCTTTCT+AGG - chr1_3:61460363-61460382 Msa0130970:intron 55.0%
TGTGGGGAGGCTGCTAACTT+TGG - chr1_3:61461309-61461328 Msa0130970:intron 55.0%
GTGGGGAGGCTGCTAACTTT+GGG - chr1_3:61461310-61461329 Msa0130970:intron 55.0%
!! GATGGGCTAGTTGAGTGGGT+AGG - chr1_3:61461606-61461625 Msa0130970:CDS 55.0%
GGAGCCAACAGAGTTCAGAG+AGG + chr1_3:61462430-61462449 None:intergenic 55.0%
CTGCTTGGAGCATGCTGTTC+AGG - chr1_3:61463257-61463276 Msa0130970:intron 55.0%
!! GGAGCATGCTGTTCAGGTTG+TGG - chr1_3:61463263-61463282 Msa0130970:intron 55.0%
CCACAGTAGCGAGAGCAGTT+TGG + chr1_3:61464764-61464783 None:intergenic 55.0%
CCAAACTGCTCTCGCTACTG+TGG - chr1_3:61464761-61464780 Msa0130970:intron 55.0%
ACTGCTCTCGCTACTGTGGA+TGG - chr1_3:61464765-61464784 Msa0130970:intron 55.0%
TGCTAACCCTTTCTTCGGCC+TGG + chr1_3:61464815-61464834 None:intergenic 55.0%
!! GTCACAAGATGATGGGGAGC+TGG - chr1_3:61465454-61465473 Msa0130970:CDS 55.0%
CGAAGCTTCAGTTCCTCGCA+AGG - chr1_3:61465703-61465722 Msa0130970:CDS 55.0%
CTTTGCCCACATGAAGGGTG+CGG - chr1_3:61465824-61465843 Msa0130970:CDS 55.0%
! GGGCTAGGACAGAGCATCTA+AGG - chr1_3:61465957-61465976 Msa0130970:CDS 55.0%
AGGGCTGCGGTCTTTCTTTC+AGG - chr1_3:61466017-61466036 Msa0130970:CDS 55.0%
!! TAGAGGGTGCTGCAGCATGT+TGG - chr1_3:61466276-61466295 Msa0130970:five_prime_UTR 55.0%
CGCGGGCCGTGTTTACTACA+AGG - chr1_3:61458069-61458088 Msa0130970:CDS 60.0%
CGCCGTACCCAAAACGCTTC+TGG + chr1_3:61458231-61458250 None:intergenic 60.0%
AGACGAGAACTGCGCACACC+AGG + chr1_3:61461952-61461971 None:intergenic 60.0%
GAAGTCCGTGTGAGAGGCTG+AGG - chr1_3:61465585-61465604 Msa0130970:CDS 60.0%
CTTGGCCTCAGCCTCTCACA+CGG + chr1_3:61465593-61465612 None:intergenic 60.0%
CGAGGAACTGAAGCTTCGGC+AGG + chr1_3:61465701-61465720 None:intergenic 60.0%
CGCACCCTTCATGTGGGCAA+AGG + chr1_3:61465826-61465845 None:intergenic 60.0%
AGCAGGCACAGGCGGAAAAC+AGG - chr1_3:61466055-61466074 Msa0130970:CDS 60.0%
! GGGTGCTGCAGCATGTTGGT+TGG - chr1_3:61466280-61466299 Msa0130970:five_prime_UTR 60.0%
!! GACGTGCCTGGTTCGGCGTT+TGG - chr1_3:61458332-61458351 Msa0130970:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 61457470 61466571 61457470 ID=Msa0130970;Name=Msa0130970
chr1_3 mRNA 61457470 61466571 61457470 ID=Msa0130970-mRNA-1;Parent=Msa0130970;Name=Msa0130970-mRNA-1;_AED=0.01;_eAED=0.01;_QI=301|0.83|0.85|1|1|1|7|469|1482
chr1_3 exon 61457470 61460193 61457470 ID=Msa0130970-mRNA-1:exon:20407;Parent=Msa0130970-mRNA-1
chr1_3 exon 61460705 61460896 61460705 ID=Msa0130970-mRNA-1:exon:20406;Parent=Msa0130970-mRNA-1
chr1_3 exon 61461561 61462111 61461561 ID=Msa0130970-mRNA-1:exon:20405;Parent=Msa0130970-mRNA-1
chr1_3 exon 61462590 61462740 61462590 ID=Msa0130970-mRNA-1:exon:20404;Parent=Msa0130970-mRNA-1
chr1_3 exon 61463589 61463656 61463589 ID=Msa0130970-mRNA-1:exon:20403;Parent=Msa0130970-mRNA-1
chr1_3 exon 61463824 61463902 61463824 ID=Msa0130970-mRNA-1:exon:20402;Parent=Msa0130970-mRNA-1
chr1_3 exon 61465118 61466571 61465118 ID=Msa0130970-mRNA-1:exon:20401;Parent=Msa0130970-mRNA-1
chr1_3 five_prime_UTR 61466271 61466571 61466271 ID=Msa0130970-mRNA-1:five_prime_utr;Parent=Msa0130970-mRNA-1
chr1_3 CDS 61465118 61466270 61465118 ID=Msa0130970-mRNA-1:cds;Parent=Msa0130970-mRNA-1
chr1_3 CDS 61463824 61463902 61463824 ID=Msa0130970-mRNA-1:cds;Parent=Msa0130970-mRNA-1
chr1_3 CDS 61463589 61463656 61463589 ID=Msa0130970-mRNA-1:cds;Parent=Msa0130970-mRNA-1
chr1_3 CDS 61462590 61462740 61462590 ID=Msa0130970-mRNA-1:cds;Parent=Msa0130970-mRNA-1
chr1_3 CDS 61461561 61462111 61461561 ID=Msa0130970-mRNA-1:cds;Parent=Msa0130970-mRNA-1
chr1_3 CDS 61460705 61460896 61460705 ID=Msa0130970-mRNA-1:cds;Parent=Msa0130970-mRNA-1
chr1_3 CDS 61457939 61460193 61457939 ID=Msa0130970-mRNA-1:cds;Parent=Msa0130970-mRNA-1
chr1_3 three_prime_UTR 61457470 61457938 61457470 ID=Msa0130970-mRNA-1:three_prime_utr;Parent=Msa0130970-mRNA-1
Gene Sequence

>Msa0130970

ATGGGTAATGCTGAAATCCCCAATTGGCTTGAAGGGTTGCCACTGGCACCTGAATTTCGACCAACTGATACTGAATTTTCCGACCCAATTGCTTATATCTCAAAGATTGAGCAGAAAGCTGGTAAATTTGGGATATGTAAGATTATCCCACCATTGCCCAAGCCTTCAAAAAAATATGTTTTTTCTAATTTGAATAAGTCCCTTTTGAAGCGGCCTGAATTGGGGCCAGATATTAGTTCTTTGGGTGCTGGTAATTCTTGGAAAACGGGTTCTGGGGATAGTAGTAATGATGGAGTGTCGCGGGCCGTGTTTACTACAAGGCAACAGGAAGTGGGACAAAATGTCAAAAAAACTAAAGGGGTTGTTCAGAAGTCAATGGCATGTGTCCATAAGCAAGTTTGGCAAAGTGGAGAAGTTTATACAATTGAACAGTTTGAGTCTAAATCGAAGACTTTTGCCAGAAGCGTTTTGGGTACGGCGAAGGATGTTTCTCCATTGGTTGTAGAGGCCATGTTTTGGAAGGCAGCTTCAGAGAAGCCTATTTATGTGGAGTATGCTAATGACGTGCCTGGTTCGGCGTTTGGAGAATCACAGGGTCAATTTTATCGTAGTCATCGAAGGCAACGGAAAAGGACTGATTATAAGAGTAGGGTAGATAGCTCTGTTTGTAAAGAAACTGAAATGGGTGGTGTAAATGATACACAAAATAATGAGTCTAAAGGCGTTCCTTCCCCAAGTCATGCAGAATCGTGTTTAGAGACGTCTAAATCAGCTATGACTTTGTCAACATCTACACCAAATGAGGCTTCACAGCCTTCTAAGGAGATGATTTCAGATGCTGACAATGATATGCAAGGCACTGCTGGTTGGAAGCTTTCAAATAGTCCTTGGAATCTGCAAGTTATTCCTCGTGCTTCAGGCTCACTAACACGTTTCATGCCAGATGATATTCCTGGTGTTACTTCACCCATGATATACATTGGTATGTTGTTTAGTTGGTTTGCCTGGCATGTAGAGGATCATGAACTTCACAGCTTGAATTTTCTTCACACTGGCTCATCAAAGACTTGGTACTCCGTTCCTGGAAATTATGCCTTTGCTTTTGAGGAAGTCATCCGCACAGAGGGTTATGGTGGTGATGTTGATCAATTAGCTGCTTTGAAACTTTTGGGCGAAAAAACTACTCTTTTATCACCTGAGGTAGTTGTTGCATCTGGGATTCCTTGCTGCAGGTTAGTACAGAATCCTGGTGAATTTGTTGTGACTTTTCCAAGAGCTTATCATGTAGGATTCAGCCACGGTTTTAACTGTGGGGAGGCTGCTAACTTTGGGACTCCACAATGGCTTGGCATAGCTAAAGAAGCTGCAGTGCGTAGAGCTACAATGAATCATCTTCCTATGCTCTCCCATCAGCAACTGCTTTACTTGCTGACCATGTCTTTTATTTCAAGTGTGCCAAGAACACTATTACCTGGTGTGCGCAGTTCTCGTCTGAGAGACCGTCAGAAAGAAGAAAGAGAGATTCTAGTAAAACAGGCTTTTATAGAAGATATGCTGCACGAAAACAAGCTGCTATCCATTCTTCTTGGAAAAGAAGCTACTAAAGAAGTTGTTTTATGGAATGTTGATTTACTACCAGATTCTGGCAAATATCGCCAGTTGTCTGATTTAGCTTCTACTTCTGGAACCTATATGGCGGACATGTCAAATGATAATATTAGTTCTGCTGATAAGAGTAGCCATTGTCTGCTCGATGAGATGAGTTTGTACATGGAGAATCTGACTGATTCAGATGTTGGCTATGATGATCTTCCATGTCACTTCCAAACTGATTCAGGAGCATTGGTTTGTGTGGGTTGTGGAATACTTGGTTTTCCATTTATGACATTAATACAACCAACTGAGAAATTGATAATGGAACTTCCTGATAATCATCTAGTTGAAGATTCCTCTCTGAACTCTGTTGGCTCCCTTCATAGTGCAGTCTCAAGTGCAGTCTCAAGGGATCTTTCTGTTTCTGAACTTGCTTCTGCAAAGGATTTGCCGGATCAGTCATTGAACGAGTGCAATAAATGTTGGAACACCTCCAGTACATTTTTGAAGCCACGGATTTTCTGCTTGGAGCATGCTGTTCAGGTTGTGGAGATGTTGCAGAGCAAAGGTGGAGCCAATGTGCTTATAATTTGCCATTCAGACTATCCGAAAATAAAGGCACATGCCAGGGCAGTTGCAGAAGAGATACAAAGTGCTTTTGATTATAACGAGGTTCCAATGGATATTGCATCCCCAGAAAATTTGGCTTTGATAGATCTGGCAATTGATGGTAAAGAACTTGATGAATGTGAAGATTGGACATCTAAACTAGGTCTTAATCTGCGGTTTTGTGTCAATAATATAAACAAATCTCCATGTAAACAAGTTCCTTTTACGCTAGCATTGGGGATGCAGTTCTATGATAAACGTCCTGGTTTATCTTTAAATTGGCATTCACAGAAAGCTCGATCTAAAAGGTCAAATCGTTTAGCTCAGTCTAAACCTGACAACATTCAGAGAATGAAGGATGATCAATTGCAGGAAAGAATTGATGGCTCCACTGCTGAAAAGAAACTGCTTCAATATTCAAGGAGAAAATTCAAGCCAAAGCAAAGTTGTTTCTCTGTAGCAAGCACGGTCTGTGAATCCCATGAGAAGTCCAAAAATGTGTCAGCTGTTTTGAGTGCGGAGCATTATAAATTTGTTTCTAAAGATGAGCTTGACACAGACAATTTCAGGAGTGATTGTGCATTGTCACGTGGCTCTGCTTCTGCTGCAATGACTCCATTGCATAATGAAATCCAGAATGCTGAAGCTCCCACTAGTATGAGTTTGAATACTAGTGTCTCGGAAAAATGCAGCATAGAGAACCAGGATTGTCAGAACAATAAATATTCTGGCTCACTTACAAATGGAATAGACAAAAATGTCGATGTGTTTGGAAACAACCAAATTACTGAAGCCATTGGTAGCAAGTGTGATAACTTAGATTTAGATGGTGAAGGGTATCAAGAACATCAGTCTGCATGCAAAAGCAACAGTGAAGCTGTTTTATCTACTGCTTCATTGGTAAACCAAACTGCTCTCGCTACTGTGGATGGAAGTTTTGAAAGTCCAATTAATAACCAGGCCGAAGAAAGGGTTAGCAATTCTATGTCATTGAAAGAGACAACTGAGGGAGAAAGTAAGTCTTTGACTGAAATGGACGAGGAACCTCTAAATGATGATAAAGAAATGAGTGAACATGCTCCTACTGCAGACGTTTGTGAAGTTCCAAGAGAGCTTTATGCTTCTGCAAACTTCCATAATACAGTAAACTTGGATGCTGAGATGCAGCAAGAACGACAAGTTGGAGAAAGTGGCGAACAGGAAATAATTCAGTCCACTCATATTTCCACAAAACAATTGTGTGAATCTACAAGTGGGGAATATGCAGAGGGATTGCACGATGAAGTGATTTTGGAGTCTTCAAAGCAGAGTCTGGTCCAAAACGAGAATATAACTAATGAGGAACATGTATCTAGTTATGTTGCAAAAGGCGACAATAGAAGTATAACCATATCAGAAATAGGATGTTCTGAAGTTTCAGCAGAAACCTGTCCCAAAGAAGACTCATGTATTCAATTTGTTTCGAATACTGAAAAGAAAATGGAAATCCAACCCATTACTAGAGTTGATGAGGAACTCTCTACATCAATCCAGGAATGTTCTCAAACCGAGAAAAAGACGGGTGGCAGAGAAAATGTAAATGGAAGTGAAGTTGATTTGTCACAAGATGATGGGGAGCTGGAAAGCTGTGAGTTGACTACAGAAGTTCCCAGATCAAATGCTGGGAAGAAAAAAAAGAGGAAAATGGAAGACACGGAAAAAAACCAATTTGATTGCTATGACTTTATAAGAAGTCCGTGTGAGAGGCTGAGGCCAAGAACTGAGAAGATTGCTACAGGCAAAAGTGTAGGGGACAACAGCCAAAATGAGGAGGAAAATCCAGTAGCTAAAAGGACACGGAAACCTGCCGAAGCTTCAGTTCCTCGCAAGGATAAAAAATCCAATGTTAAAAGGCCGCATAAGTGTGACCTTGATAATTGCCGTATGAGTTTCACCACCAAGGCTGAGTTACAGTTGCACAAACGTAACCTTTGCCCACATGAAGGGTGCGGTAAGAAATTCAGTTCCCACAAATACGCATTGATTCACCAGCGTGTTCATGAGGATGATAGGCCCTTTAAATGCACATGGAAAGGTTGTTCCATGTCATTCAAGTGGTCATGGGCTAGGACAGAGCATCTAAGGGTGCATACTGGGGAGAAGCCTTATCAATGTAAGGTTGAGGGCTGCGGTCTTTCTTTCAGGTTCATATCAGATTTTAGCAGGCACAGGCGGAAAACAGGACACTACGTGAAATCTCCTGCTTGA
Protein sequence

>Msa0130970

MGNAEIPNWLEGLPLAPEFRPTDTEFSDPIAYISKIEQKAGKFGICKIIPPLPKPSKKYVFSNLNKSLLKRPELGPDISSLGAGNSWKTGSGDSSNDGVSRAVFTTRQQEVGQNVKKTKGVVQKSMACVHKQVWQSGEVYTIEQFESKSKTFARSVLGTAKDVSPLVVEAMFWKAASEKPIYVEYANDVPGSAFGESQGQFYRSHRRQRKRTDYKSRVDSSVCKETEMGGVNDTQNNESKGVPSPSHAESCLETSKSAMTLSTSTPNEASQPSKEMISDADNDMQGTAGWKLSNSPWNLQVIPRASGSLTRFMPDDIPGVTSPMIYIGMLFSWFAWHVEDHELHSLNFLHTGSSKTWYSVPGNYAFAFEEVIRTEGYGGDVDQLAALKLLGEKTTLLSPEVVVASGIPCCRLVQNPGEFVVTFPRAYHVGFSHGFNCGEAANFGTPQWLGIAKEAAVRRATMNHLPMLSHQQLLYLLTMSFISSVPRTLLPGVRSSRLRDRQKEEREILVKQAFIEDMLHENKLLSILLGKEATKEVVLWNVDLLPDSGKYRQLSDLASTSGTYMADMSNDNISSADKSSHCLLDEMSLYMENLTDSDVGYDDLPCHFQTDSGALVCVGCGILGFPFMTLIQPTEKLIMELPDNHLVEDSSLNSVGSLHSAVSSAVSRDLSVSELASAKDLPDQSLNECNKCWNTSSTFLKPRIFCLEHAVQVVEMLQSKGGANVLIICHSDYPKIKAHARAVAEEIQSAFDYNEVPMDIASPENLALIDLAIDGKELDECEDWTSKLGLNLRFCVNNINKSPCKQVPFTLALGMQFYDKRPGLSLNWHSQKARSKRSNRLAQSKPDNIQRMKDDQLQERIDGSTAEKKLLQYSRRKFKPKQSCFSVASTVCESHEKSKNVSAVLSAEHYKFVSKDELDTDNFRSDCALSRGSASAAMTPLHNEIQNAEAPTSMSLNTSVSEKCSIENQDCQNNKYSGSLTNGIDKNVDVFGNNQITEAIGSKCDNLDLDGEGYQEHQSACKSNSEAVLSTASLVNQTALATVDGSFESPINNQAEERVSNSMSLKETTEGESKSLTEMDEEPLNDDKEMSEHAPTADVCEVPRELYASANFHNTVNLDAEMQQERQVGESGEQEIIQSTHISTKQLCESTSGEYAEGLHDEVILESSKQSLVQNENITNEEHVSSYVAKGDNRSITISEIGCSEVSAETCPKEDSCIQFVSNTEKKMEIQPITRVDEELSTSIQECSQTEKKTGGRENVNGSEVDLSQDDGELESCELTTEVPRSNAGKKKKRKMEDTEKNQFDCYDFIRSPCERLRPRTEKIATGKSVGDNSQNEEENPVAKRTRKPAEASVPRKDKKSNVKRPHKCDLDNCRMSFTTKAELQLHKRNLCPHEGCGKKFSSHKYALIHQRVHEDDRPFKCTWKGCSMSFKWSWARTEHLRVHTGEKPYQCKVEGCGLSFRFISDFSRHRRKTGHYVKSPA*