AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0219240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0219240 MtrunA17_Chr2g0321691 92.120 533 18 2 1 511 1 531 0.0 869
Msa0219240 MtrunA17_Chr4g0053171 34.127 126 76 3 244 365 40 162 3.59e-14 74.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0219240 AT2G27350.1 62.727 440 136 5 98 511 68 505 1.65e-166 481
Msa0219240 AT2G27350.2 62.727 440 136 5 98 511 68 505 1.65e-166 481
Msa0219240 AT2G27350.3 63.551 428 127 6 111 511 81 506 6.93e-164 474
Msa0219240 AT2G27350.4 63.551 428 127 6 111 511 81 506 6.93e-164 474
Msa0219240 AT2G27350.6 63.551 428 127 6 111 511 81 506 6.93e-164 474
Msa0219240 AT2G27350.5 63.551 428 127 6 111 511 81 506 6.93e-164 474
Msa0219240 AT5G67170.2 33.094 139 83 3 244 373 36 173 3.95e-16 80.5
Msa0219240 AT5G67170.1 33.094 139 83 3 244 373 36 173 3.95e-16 80.5

Find 183 sgRNAs with CRISPR-Local

Find 489 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTATTGAAATTAAGAAAT+TGG 0.111880 2_1:-66735302 None:intergenic
AACCCTTTCTGGCAGGTTTA+TGG 0.130034 2_1:+66740074 Msa0219240:intron
ATTGAGGCATACAGCATATT+TGG 0.176533 2_1:+66741262 Msa0219240:CDS
AAATGAAGACTTTCCATTAA+AGG 0.214610 2_1:-66735972 None:intergenic
GGATATTCATTTATTCGATT+TGG 0.237876 2_1:-66741417 None:intergenic
ATTGATATTAGAAGGGTAAA+AGG 0.272382 2_1:+66737020 Msa0219240:CDS
TTCTTTCCCACTTTCCATCC+TGG 0.297988 2_1:-66741173 None:intergenic
ACCCTTTCTGGCAGGTTTAT+GGG 0.298664 2_1:+66740075 Msa0219240:intron
CCCACAATTGGTGCAGGACT+TGG 0.302410 2_1:+66740354 Msa0219240:CDS
AATGAAGACTTTCCATTAAA+GGG 0.311292 2_1:-66735971 None:intergenic
TTGAGGCATACAGCATATTT+GGG 0.322519 2_1:+66741263 Msa0219240:CDS
GCACGATTAGGGTTAGGGTT+AGG 0.323331 2_1:-66735801 None:intergenic
ATTATTGAAATTAAGAAATT+GGG 0.328395 2_1:-66735301 None:intergenic
AATGATACGCATACTCCTTT+AGG 0.333180 2_1:+66736002 Msa0219240:CDS
GAACACGCGATAAACTCTTT+TGG 0.341163 2_1:+66735683 Msa0219240:five_prime_UTR
AGTTTGAAATTGATATTAGA+AGG 0.344316 2_1:+66737012 Msa0219240:CDS
TTCTATGATTTGTTACTTGT+TGG 0.348240 2_1:+66741297 Msa0219240:CDS
GCAGATGAGCGTAGATTATA+TGG 0.348920 2_1:+66737139 Msa0219240:CDS
CACGATTAGGGTTAGGGTTA+GGG 0.352773 2_1:-66735800 None:intergenic
GAGCCTATCAATACATTTCA+TGG 0.353732 2_1:+66740249 Msa0219240:intron
CATACAATGTATAATAGATT+TGG 0.356783 2_1:-66741581 None:intergenic
GGACTCAGAATTGTATGATT+TGG 0.360597 2_1:+66737112 Msa0219240:CDS
AGTATGCTGGGAGTAGTAAT+AGG 0.363405 2_1:+66735934 Msa0219240:CDS
AAAGAGTGATGACCCTTTAA+TGG 0.366219 2_1:+66735959 Msa0219240:CDS
GCAGGTTGCGGTTGCGGAGG+AGG 0.366993 2_1:+66735476 Msa0219240:intron
GAAAGTGGAGAGGAGGAGCT+TGG 0.377608 2_1:+66735885 Msa0219240:CDS
TCGGCTAGGACTTCGCCTGC+TGG 0.378489 2_1:+66736299 Msa0219240:CDS
GACCCACGGCGTCCCACAAT+TGG 0.381817 2_1:+66740342 Msa0219240:CDS
GGTGGAACAGGTGGAGGTGG+AGG 0.383817 2_1:-66736167 None:intergenic
TTGCCGTGATGGAAGCTTCT+CGG 0.388388 2_1:+66740882 Msa0219240:CDS
GATGATGTTGTGGAGTATGC+TGG 0.388990 2_1:+66735921 Msa0219240:CDS
TCTTTCCCACTTTCCATCCT+GGG 0.392643 2_1:-66741172 None:intergenic
GAAGAAGACCCAGCACGATT+AGG 0.394372 2_1:-66735813 None:intergenic
AAGAAGACCCAGCACGATTA+GGG 0.398736 2_1:-66735812 None:intergenic
CTTCCATGAAATGTATTGAT+AGG 0.401908 2_1:-66740252 None:intergenic
GTGGTTGCAGGTTGCGGTTG+CGG 0.403972 2_1:+66735470 Msa0219240:intron
TGCCGTGATGGAAGCTTCTC+GGG 0.407832 2_1:+66740883 Msa0219240:CDS
TCTCTTCCTCTTACAGTATG+AGG 0.408181 2_1:-66738461 None:intergenic
GACCCAGCACGATTAGGGTT+AGG 0.414072 2_1:-66735807 None:intergenic
TGTATGCCTCAATCGCTTGT+AGG 0.415074 2_1:-66741252 None:intergenic
AAGTTAGTTGATGAAGGCTT+TGG 0.423312 2_1:-66736191 None:intergenic
GAAGGCTTTGGAGGTGGAAC+AGG 0.425435 2_1:-66736179 None:intergenic
TCTCGGGCTGAATACCTTGC+CGG 0.426700 2_1:+66740899 Msa0219240:CDS
TTGGGTTCAGCTCTCTTCGT+GGG 0.428248 2_1:+66740373 Msa0219240:CDS
TTTACGTCTGCTACTGCTGC+CGG 0.430656 2_1:-66741323 None:intergenic
GAGGAGCTTGGATTGGTTGT+TGG 0.431403 2_1:+66735897 Msa0219240:CDS
CAGAATTGTATGATTTGGTC+AGG 0.432551 2_1:+66737117 Msa0219240:CDS
TGCGTGGCCTGTTGTTGTTT+CGG 0.437622 2_1:+66736280 Msa0219240:CDS
ATTTGTTACTTGTTGGAAAC+CGG 0.438822 2_1:+66741304 Msa0219240:CDS
AATCCTGTTGTTAGCGGTGG+TGG 0.440498 2_1:+66736134 Msa0219240:CDS
TTATCGCGTGTTCTTGCCCT+GGG 0.440879 2_1:-66735673 None:intergenic
TGGAGAGGAGGAGCTTGGAT+TGG 0.445208 2_1:+66735890 Msa0219240:CDS
ATGTGAGTTGCAGGATCGTC+AGG 0.447330 2_1:+66741142 Msa0219240:intron
ACTGCTGAGCCATCTTCCTC+TGG 0.448459 2_1:+66740968 Msa0219240:CDS
GATGTTAAAGAAGAGATTGA+GGG 0.449253 2_1:+66736056 Msa0219240:CDS
TTTATCGCGTGTTCTTGCCC+TGG 0.450373 2_1:-66735674 None:intergenic
GAATTTAAGTTAGTTGATGA+AGG 0.450932 2_1:-66736197 None:intergenic
TATACATTTCACACATGGCT+TGG 0.451765 2_1:-66740112 None:intergenic
CCCAAGTCCTGCACCAATTG+TGG 0.451802 2_1:-66740355 None:intergenic
ACCCAGCACGATTAGGGTTA+GGG 0.453125 2_1:-66735806 None:intergenic
AATTCAAGAAGGAGTGCATC+GGG 0.454425 2_1:+66736215 Msa0219240:CDS
CGGCTAGGACTTCGCCTGCT+GGG 0.458808 2_1:+66736300 Msa0219240:CDS
GAGTAGGAGTATATATGAAT+AGG 0.459015 2_1:-66740140 None:intergenic
GTTCAACGTGGTTCTTCTGC+TGG 0.459785 2_1:+66735747 Msa0219240:CDS
AGATGTTAAAGAAGAGATTG+AGG 0.460740 2_1:+66736055 Msa0219240:CDS
AACCCTAACCCTAATCGTGC+TGG 0.461432 2_1:+66735804 Msa0219240:CDS
ACTTACTACATCATCATAAG+AGG 0.463060 2_1:-66736402 None:intergenic
GTTGATGAAGGCTTTGGAGG+TGG 0.469803 2_1:-66736185 None:intergenic
CCACCACCACCGCTAACAAC+AGG 0.470320 2_1:-66736137 None:intergenic
GAGAGTGGCACGTGAGATAG+AGG 0.471351 2_1:-66735180 None:intergenic
GATCCTGCATTAACAGCATT+AGG 0.471649 2_1:-66736242 None:intergenic
TAATCGTGCTGGGTCTTCTT+CGG 0.472975 2_1:+66735815 Msa0219240:CDS
GGTCTCGACCTTCATCTCCC+CGG 0.476006 2_1:+66736321 Msa0219240:CDS
GTCTCGACCTTCATCTCCCC+GGG 0.476186 2_1:+66736322 Msa0219240:CDS
CACGTCTTTAGGAGCGGGAG+AGG 0.481120 2_1:+66738404 Msa0219240:intron
GGTCTGCAACAGCACGGAAA+AGG 0.483309 2_1:-66737079 None:intergenic
CTGTGTAACGTGCTCCGGCC+GGG 0.484018 2_1:-66735838 None:intergenic
ACGAAAACTTCATTTCCTAA+AGG 0.485670 2_1:-66736017 None:intergenic
GGAGGTGGAACAGGTGGAGG+TGG 0.486650 2_1:-66736170 None:intergenic
CTTCACTTTCACTATGAGCC+CGG 0.486820 2_1:-66736340 None:intergenic
TGGGTCTTCTTCGGCCCGGC+CGG 0.487424 2_1:+66735824 Msa0219240:CDS
ATCTCTCATATATCAAACTT+AGG 0.489702 2_1:-66741536 None:intergenic
TTAGTTGATGAAGGCTTTGG+AGG 0.490951 2_1:-66736188 None:intergenic
GTATGCTGGGAGTAGTAATA+GGG 0.491306 2_1:+66735935 Msa0219240:CDS
TTTGGAGGTGGAACAGGTGG+AGG 0.494963 2_1:-66736173 None:intergenic
TTCACTTTCACTATGAGCCC+GGG 0.495969 2_1:-66736339 None:intergenic
CCACAATTGGTGCAGGACTT+GGG 0.496349 2_1:+66740355 Msa0219240:CDS
GGCTTTGGAGGTGGAACAGG+TGG 0.497303 2_1:-66736176 None:intergenic
TGCACCTGTGTAACGTGCTC+CGG 0.499439 2_1:-66735843 None:intergenic
GGAAATTGAACTTGCCGTGA+TGG 0.500131 2_1:+66740871 Msa0219240:CDS
CTTGGGTTCAGCTCTCTTCG+TGG 0.501925 2_1:+66740372 Msa0219240:CDS
TAGTTACCTACAAGCGATTG+AGG 0.502638 2_1:+66741246 Msa0219240:CDS
CCTGTGTAACGTGCTCCGGC+CGG 0.503618 2_1:-66735839 None:intergenic
AAATCGTTCAGCAAAGGCAT+TGG 0.506180 2_1:+66735640 Msa0219240:five_prime_UTR
CATGAATATGTTACTGTCGA+TGG 0.506460 2_1:+66741219 Msa0219240:CDS
TAAGAGGAAGAGAAGAGATA+AGG 0.507324 2_1:+66738471 Msa0219240:CDS
GCACCAATTGTGGGACGCCG+TGG 0.510578 2_1:-66740345 None:intergenic
CTATGAGCCCGGGGAGATGA+AGG 0.510791 2_1:-66736329 None:intergenic
CCAAGTCCTGCACCAATTGT+GGG 0.516638 2_1:-66740354 None:intergenic
TGATGAAAACTTAGGCGTAC+TGG 0.517126 2_1:-66740294 None:intergenic
CTGTTGCAGACCAAGTGTAC+GGG 0.517724 2_1:+66737090 Msa0219240:CDS
ATGATGTTGTGGAGTATGCT+GGG 0.520937 2_1:+66735922 Msa0219240:CDS
GTCCTAGCCGAAACAACAAC+AGG 0.525011 2_1:-66736287 None:intergenic
GTTGCAGGTTGCGGTTGCGG+AGG 0.527495 2_1:+66735473 Msa0219240:intron
ATAAGCTCTACCTGTGGAGT+AGG 0.529541 2_1:-66740156 None:intergenic
TCTCCTAATGCTGTTAATGC+AGG 0.529824 2_1:+66736239 Msa0219240:CDS
GGTTGTTGGTGATGATGTTG+TGG 0.533732 2_1:+66735911 Msa0219240:CDS
GCTGTTGCAGACCAAGTGTA+CGG 0.534570 2_1:+66737089 Msa0219240:CDS
GTTTGAAATTGATATTAGAA+GGG 0.536886 2_1:+66737013 Msa0219240:CDS
AAACATACTAGAGTAAATAC+AGG 0.536953 2_1:-66741438 None:intergenic
AAGCCCTCGTTCTCTATCAC+TGG 0.537120 2_1:-66736101 None:intergenic
GGTTACCATGATGAAAACTT+AGG 0.539612 2_1:-66740302 None:intergenic
GCATTGGAATCACTGCTCCC+AGG 0.542057 2_1:+66735656 Msa0219240:five_prime_UTR
GGTCAACAAGGGAGTTGTAA+TGG 0.546094 2_1:-66740323 None:intergenic
TGGGACGCCGTGGGTCAACA+AGG 0.546376 2_1:-66740335 None:intergenic
ATGAATATGTTACTGTCGAT+GGG 0.547760 2_1:+66741220 Msa0219240:CDS
CCTGTTGTTAGCGGTGGTGG+TGG 0.548646 2_1:+66736137 Msa0219240:CDS
TAGGCGTACTGGTGGTGTAT+CGG 0.549271 2_1:-66740283 None:intergenic
GATCGTCAGGTAGTGATCCC+AGG 0.549376 2_1:+66741155 Msa0219240:CDS
CGGCGTCCCACAATTGGTGC+AGG 0.549910 2_1:+66740348 Msa0219240:CDS
TAACTTGCTCCAGAGGAAGA+TGG 0.550315 2_1:-66740977 None:intergenic
GGCCACGCAGATCCTCTCCT+TGG 0.551230 2_1:-66736266 None:intergenic
ACAGGTGCAATCTGTTGCTA+AGG 0.553828 2_1:+66735857 Msa0219240:CDS
GGCCTGTTGTTGTTTCGGCT+AGG 0.555957 2_1:+66736285 Msa0219240:CDS
ACCCTAACCCTAATCGTGCT+GGG 0.564355 2_1:+66735805 Msa0219240:CDS
CAACTAACTTAAATTCAAGA+AGG 0.565387 2_1:+66736204 Msa0219240:CDS
TGGCACGTGAGATAGAGGTT+TGG 0.567490 2_1:-66735175 None:intergenic
TCTTCTTTAACATCTTTCCC+AGG 0.569223 2_1:-66736047 None:intergenic
ACAACTCCCTTGTTGACCCA+CGG 0.570726 2_1:+66740328 Msa0219240:CDS
GGCAGCAGTAGCAGACGTAA+AGG 0.571294 2_1:+66741325 Msa0219240:CDS
ATTCTGAGTCCCCGTACACT+TGG 0.573961 2_1:-66737100 None:intergenic
CACCAATTGTGGGACGCCGT+GGG 0.574073 2_1:-66740344 None:intergenic
GATGAAGGTCGAGACCCAGC+AGG 0.574826 2_1:-66736314 None:intergenic
GTTGCTAAGGATGAAGAAAG+TGG 0.575080 2_1:+66735870 Msa0219240:CDS
GGATGAAGAAAGTGGAGAGG+AGG 0.578913 2_1:+66735878 Msa0219240:CDS
GAGATATTAACTTGCTCCAG+AGG 0.579465 2_1:-66740984 None:intergenic
GTTTGCAAGAATCGAGGGAA+AGG 0.580810 2_1:+66736078 Msa0219240:CDS
AAATTCAAGAAGGAGTGCAT+CGG 0.581706 2_1:+66736214 Msa0219240:CDS
TGAGGGTTTGCAAGAATCGA+GGG 0.582086 2_1:+66736073 Msa0219240:CDS
CATATATACTCCTACTCCAC+AGG 0.582359 2_1:+66740146 Msa0219240:CDS
TCATAAGAGGACACATAGCA+TGG 0.582849 2_1:-66736389 None:intergenic
GGTACATTTAAGCAACAACT+TGG 0.583320 2_1:+66740923 Msa0219240:CDS
TTGTTGCTTAAATGTACCAC+CGG 0.583828 2_1:-66740918 None:intergenic
TGATCTTGAGCTCACAGAGA+AGG 0.583852 2_1:+66740850 Msa0219240:CDS
CATTGGAATCACTGCTCCCA+GGG 0.587906 2_1:+66735657 Msa0219240:five_prime_UTR
TTGAGGGTTTGCAAGAATCG+AGG 0.591729 2_1:+66736072 Msa0219240:CDS
TGGGTTCAGCTCTCTTCGTG+GGG 0.593495 2_1:+66740374 Msa0219240:CDS
AGTGATCCCAGGATGGAAAG+TGG 0.596810 2_1:+66741166 Msa0219240:CDS
TAAGGATGAAGAAAGTGGAG+AGG 0.597056 2_1:+66735875 Msa0219240:CDS
ACGTCTTTAGGAGCGGGAGA+GGG 0.598464 2_1:+66738405 Msa0219240:intron
GTGATCCCAGGATGGAAAGT+GGG 0.600838 2_1:+66741167 Msa0219240:CDS
GAGGGTAATCCTGTTGTTAG+CGG 0.603801 2_1:+66736128 Msa0219240:CDS
CAGTAGCAGACGTAAAGGAA+AGG 0.605981 2_1:+66741330 Msa0219240:CDS
AGAGAACGAGGGCTTGTGTG+AGG 0.609028 2_1:+66736109 Msa0219240:CDS
GCTTAAATGTACCACCGGCA+AGG 0.611381 2_1:-66740913 None:intergenic
CTGAAGAAATCGTTCAGCAA+AGG 0.611706 2_1:+66735634 Msa0219240:five_prime_UTR
CGGGCTCATAGTGAAAGTGA+AGG 0.622688 2_1:+66736341 Msa0219240:CDS
GTGCTGGGTCTTCTTCGGCC+CGG 0.623317 2_1:+66735820 Msa0219240:CDS
GAGAACGAGGGCTTGTGTGA+GGG 0.624656 2_1:+66736110 Msa0219240:CDS
GTCAGGTAGTGATCCCAGGA+TGG 0.629925 2_1:+66741159 Msa0219240:CDS
AGCCCGAGAAGCTTCCATCA+CGG 0.635675 2_1:-66740885 None:intergenic
TCGATTATACATTTCACACA+TGG 0.637286 2_1:-66740117 None:intergenic
TGAGGCATACAGCATATTTG+GGG 0.641767 2_1:+66741264 Msa0219240:CDS
AGAGGTTTGGTTATGACACG+TGG 0.645455 2_1:-66735162 None:intergenic
GGTAATCCTGTTGTTAGCGG+TGG 0.646970 2_1:+66736131 Msa0219240:CDS
CGGGCTGAATACCTTGCCGG+TGG 0.647286 2_1:+66740902 Msa0219240:CDS
TCACTTTCACTATGAGCCCG+GGG 0.647451 2_1:-66736338 None:intergenic
CCGGCCGGAGCACGTTACAC+AGG 0.649179 2_1:+66735839 Msa0219240:CDS
GGGCTCATAGTGAAAGTGAA+GGG 0.654153 2_1:+66736342 Msa0219240:CDS
GGGACGCCGTGGGTCAACAA+GGG 0.656673 2_1:-66740334 None:intergenic
ACACTTGGTCTGCAACAGCA+CGG 0.659941 2_1:-66737085 None:intergenic
GGAGGAGGAAGCTGAATCAA+CGG 0.676953 2_1:+66735491 Msa0219240:five_prime_UTR
AAGGCCAGTGATAGAGAACG+AGG 0.680419 2_1:+66736097 Msa0219240:CDS
TGTTGCAGACCAAGTGTACG+GGG 0.685558 2_1:+66737091 Msa0219240:CDS
AATGCAGGATCACCAAGGAG+AGG 0.689700 2_1:+66736254 Msa0219240:CDS
ACGGTGGGAGGAAAAGAGAG+TGG 0.690544 2_1:-66735195 None:intergenic
CTGTTAATGCAGGATCACCA+AGG 0.695840 2_1:+66736249 Msa0219240:CDS
GGAGGAAGCTGAATCAACGG+TGG 0.733312 2_1:+66735494 Msa0219240:five_prime_UTR
AGGCCAGTGATAGAGAACGA+GGG 0.741926 2_1:+66736098 Msa0219240:CDS
TGAAAACTTAGGCGTACTGG+TGG 0.744384 2_1:-66740291 None:intergenic
ATTCAAGAAGGAGTGCATCG+GGG 0.750742 2_1:+66736216 Msa0219240:CDS
CACCAAGGAGAGGATCTGCG+TGG 0.755511 2_1:+66736264 Msa0219240:CDS
ACTCGTATCTATGTTCAACG+TGG 0.784709 2_1:+66735735 Msa0219240:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTGAAATTAAGAAATT+GGG - chr2_1:66735304-66735323 None:intergenic 10.0%
!! AATTATTGAAATTAAGAAAT+TGG - chr2_1:66735305-66735324 None:intergenic 10.0%
!! TTATATATTAGTTAATTAGA+AGG + chr2_1:66736914-66736933 Msa0219240:intron 10.0%
!! TTACAAAAATGATATTATAT+AGG + chr2_1:66738199-66738218 Msa0219240:intron 10.0%
!! AAACAAATTTCTAAATATTT+AGG + chr2_1:66738620-66738639 Msa0219240:intron 10.0%
!!! TTTTTTTGATGAAGTTTTTT+TGG + chr2_1:66735444-66735463 Msa0219240:intron 15.0%
!!! TTTTTTGATGAAGTTTTTTT+GGG + chr2_1:66735445-66735464 Msa0219240:intron 15.0%
!! GATAATATCTTATATTGAAA+TGG + chr2_1:66736958-66736977 Msa0219240:intron 15.0%
!!! ATTTAAGAAGATTTGATTTT+AGG + chr2_1:66737442-66737461 Msa0219240:intron 15.0%
!! AAATGGTATAAACTAAATAT+GGG - chr2_1:66738789-66738808 None:intergenic 15.0%
!! AACAAATTTCAAAATATTTG+TGG - chr2_1:66738812-66738831 None:intergenic 15.0%
!!! TTTGATTTAAAATAGTTAGT+TGG + chr2_1:66739406-66739425 Msa0219240:intron 15.0%
!!! ACTTTTTAACTTTTTTGAAT+AGG + chr2_1:66740039-66740058 Msa0219240:intron 15.0%
!! TTAGTTCATTAAAAAAATCA+TGG + chr2_1:66741372-66741391 Msa0219240:three_prime_UTR 15.0%
!!! AAAAAATTAGGGTTTTGTTT+CGG - chr2_1:66735281-66735300 None:intergenic 20.0%
!! AAGAAATTGGGAAAAAATTA+GGG - chr2_1:66735292-66735311 None:intergenic 20.0%
!! TAAGAAATTGGGAAAAAATT+AGG - chr2_1:66735293-66735312 None:intergenic 20.0%
!! TTAATTACTTAATGAGAACA+AGG - chr2_1:66736437-66736456 None:intergenic 20.0%
!! GTTCTCATTAAGTAATTAAT+TGG + chr2_1:66736438-66736457 Msa0219240:intron 20.0%
!! TATATTGGCATGTTAATATT+GGG + chr2_1:66736839-66736858 Msa0219240:intron 20.0%
!!! AGTTTGAAATTGATATTAGA+AGG + chr2_1:66737012-66737031 Msa0219240:CDS 20.0%
!!! GTTTGAAATTGATATTAGAA+GGG + chr2_1:66737013-66737032 Msa0219240:CDS 20.0%
!! ATTATATGGTATGTTAATGT+TGG + chr2_1:66737153-66737172 Msa0219240:intron 20.0%
!! TTATATGGTATGTTAATGTT+GGG + chr2_1:66737154-66737173 Msa0219240:intron 20.0%
!! CGTAATATATTGAACTTATT+AGG + chr2_1:66737223-66737242 Msa0219240:intron 20.0%
!!! CATGAATTTTTTATTATAGC+TGG + chr2_1:66737545-66737564 Msa0219240:intron 20.0%
!!! TTCTTTGATTTTGTAACAAA+AGG - chr2_1:66737583-66737602 None:intergenic 20.0%
!! TACAAAATCAAAGAAATGTT+AGG + chr2_1:66737588-66737607 Msa0219240:intron 20.0%
!! ACAAAATCAAAGAAATGTTA+GGG + chr2_1:66737589-66737608 Msa0219240:intron 20.0%
!!! TTTTAAGATGTAAATAAGCA+AGG + chr2_1:66737656-66737675 Msa0219240:intron 20.0%
!! TAAATTTACATTTATACCAC+AGG - chr2_1:66738116-66738135 None:intergenic 20.0%
!! TGGTATAAATGTAAATTTAG+CGG + chr2_1:66738117-66738136 Msa0219240:intron 20.0%
!! AATTCTATTAAAATATTGCC+TGG + chr2_1:66738348-66738367 Msa0219240:intron 20.0%
!!! TTTTCTCAATTTATAACAGA+AGG + chr2_1:66738433-66738452 Msa0219240:CDS 20.0%
!! TTTAAAAACAATACATGCTA+GGG - chr2_1:66738602-66738621 None:intergenic 20.0%
!!! TTTTAAAAACAATACATGCT+AGG - chr2_1:66738603-66738622 None:intergenic 20.0%
!! GAAATGGTATAAACTAAATA+TGG - chr2_1:66738790-66738809 None:intergenic 20.0%
!! TTTCAAAATATTTGTGGAAA+TGG - chr2_1:66738806-66738825 None:intergenic 20.0%
!! CATAAAAAGTTTACACAAAT+GGG - chr2_1:66739471-66739490 None:intergenic 20.0%
!! ACATAAAAAGTTTACACAAA+TGG - chr2_1:66739472-66739491 None:intergenic 20.0%
!!! GTAAACTTTTTATGTATACT+TGG + chr2_1:66739477-66739496 Msa0219240:intron 20.0%
!! GTTTACATGTAATAAACTAA+AGG - chr2_1:66739849-66739868 None:intergenic 20.0%
!! ATCATTAACAAGAAAATCAA+GGG - chr2_1:66739899-66739918 None:intergenic 20.0%
!! AATCATTAACAAGAAAATCA+AGG - chr2_1:66739900-66739919 None:intergenic 20.0%
!!! CTTTCTATTTTATTGTATGA+TGG + chr2_1:66740438-66740457 Msa0219240:intron 20.0%
!! AATTTCTGTTCAATGTAATA+TGG - chr2_1:66740590-66740609 None:intergenic 20.0%
!!! TCTATTGATAGATTTAAGAT+GGG - chr2_1:66741046-66741065 None:intergenic 20.0%
!!! TTGATGTATTTGTTGAAATT+TGG + chr2_1:66741092-66741111 Msa0219240:intron 20.0%
!!! ATTATTTGCAACATTTTTCA+AGG + chr2_1:66741557-66741576 Msa0219240:three_prime_UTR 20.0%
!!! TTATTTGCAACATTTTTCAA+GGG + chr2_1:66741558-66741577 Msa0219240:three_prime_UTR 20.0%
!! CATACAATGTATAATAGATT+TGG - chr2_1:66741584-66741603 None:intergenic 20.0%
! AGAAAACTGAGAAAAAGAAA+CGG - chr2_1:66735246-66735265 None:intergenic 25.0%
!!! TTGTTGTTTAAAGTAGTTGA+AGG + chr2_1:66735555-66735574 Msa0219240:intron 25.0%
!! TTTAAAGTAGTTGAAGGATT+TGG + chr2_1:66735561-66735580 Msa0219240:intron 25.0%
! TTAAAGTAGTTGAAGGATTT+GGG + chr2_1:66735562-66735581 Msa0219240:intron 25.0%
! AATGAAGACTTTCCATTAAA+GGG - chr2_1:66735974-66735993 None:intergenic 25.0%
! AAATGAAGACTTTCCATTAA+AGG - chr2_1:66735975-66735994 None:intergenic 25.0%
!!! GAATTTAAGTTAGTTGATGA+AGG - chr2_1:66736200-66736219 None:intergenic 25.0%
! CAACTAACTTAAATTCAAGA+AGG + chr2_1:66736204-66736223 Msa0219240:CDS 25.0%
!!! TTTTTTTTATATCCCCAGTT+AGG + chr2_1:66736490-66736509 Msa0219240:intron 25.0%
! AAACTATCCTACAATTTAAC+TGG + chr2_1:66736695-66736714 Msa0219240:intron 25.0%
! AACTATCCTACAATTTAACT+GGG + chr2_1:66736696-66736715 Msa0219240:intron 25.0%
!!! TTTTGAAAGAGTTGTTTGTT+AGG + chr2_1:66736811-66736830 Msa0219240:intron 25.0%
! CAATATTAACATGCCAATAT+AGG - chr2_1:66736840-66736859 None:intergenic 25.0%
! CTATATTGGCATGTTAATAT+TGG + chr2_1:66736838-66736857 Msa0219240:intron 25.0%
!! TTAATTAGAAGGTTGATTCA+TGG + chr2_1:66736925-66736944 Msa0219240:intron 25.0%
! ATTGATATTAGAAGGGTAAA+AGG + chr2_1:66737020-66737039 Msa0219240:CDS 25.0%
!! ACTTACTTATTTGATTTCCA+CGG + chr2_1:66737268-66737287 Msa0219240:intron 25.0%
!!! CATAATAAATACCGCTTTTT+GGG - chr2_1:66737310-66737329 None:intergenic 25.0%
!!! TCATAATAAATACCGCTTTT+TGG - chr2_1:66737311-66737330 None:intergenic 25.0%
! AAAAGCGGTATTTATTATGA+AGG + chr2_1:66737311-66737330 Msa0219240:intron 25.0%
!!! AATTTTTTATTATAGCTGGC+CGG + chr2_1:66737549-66737568 Msa0219240:intron 25.0%
! ATGTAAATAAGCAAGGAATA+AGG + chr2_1:66737663-66737682 Msa0219240:intron 25.0%
! TGTAAATAAGCAAGGAATAA+GGG + chr2_1:66737664-66737683 Msa0219240:intron 25.0%
! AATTACACTAAAACATGGAA+TGG - chr2_1:66738044-66738063 None:intergenic 25.0%
! GCTAAAATTACACTAAAACA+TGG - chr2_1:66738049-66738068 None:intergenic 25.0%
!!! CATTTTTTCCTTCATATAGT+GGG - chr2_1:66738176-66738195 None:intergenic 25.0%
!!! ACATTTTTTCCTTCATATAG+TGG - chr2_1:66738177-66738196 None:intergenic 25.0%
!!! GAAATTTGTTTTGTACTAAC+AGG + chr2_1:66738822-66738841 Msa0219240:intron 25.0%
! TAATTCTCTTTATCATGACA+AGG - chr2_1:66739181-66739200 None:intergenic 25.0%
! TAACTATAACTGTAACTTCA+CGG - chr2_1:66739518-66739537 None:intergenic 25.0%
! ATTACATGTAAACACATTAC+AGG + chr2_1:66739856-66739875 Msa0219240:intron 25.0%
! TACATTGAACAGAAATTGAT+TGG + chr2_1:66740593-66740612 Msa0219240:intron 25.0%
! GTTCTTTAAATTGAACTTGA+CGG + chr2_1:66740762-66740781 Msa0219240:intron 25.0%
! ATATCTCTTCTCATACAATT+TGG + chr2_1:66741000-66741019 Msa0219240:intron 25.0%
! GTCTATTGATAGATTTAAGA+TGG - chr2_1:66741047-66741066 None:intergenic 25.0%
! TATCAATAGACAGATTCATA+TGG + chr2_1:66741056-66741075 Msa0219240:intron 25.0%
!! ATGTATTTGTTGAAATTTGG+TGG + chr2_1:66741095-66741114 Msa0219240:intron 25.0%
!!! TTCTATGATTTGTTACTTGT+TGG + chr2_1:66741297-66741316 Msa0219240:CDS 25.0%
! GGATATTCATTTATTCGATT+TGG - chr2_1:66741420-66741439 None:intergenic 25.0%
! AAACATACTAGAGTAAATAC+AGG - chr2_1:66741441-66741460 None:intergenic 25.0%
! ATCTCTCATATATCAAACTT+AGG - chr2_1:66741539-66741558 None:intergenic 25.0%
GAAAACTGAGAAAAAGAAAC+GGG - chr2_1:66735245-66735264 None:intergenic 30.0%
!!! TTTGATGAAGTTTTTTTGGG+AGG + chr2_1:66735448-66735467 Msa0219240:intron 30.0%
TAAATTCGACATCTCAAAGA+AGG + chr2_1:66735530-66735549 Msa0219240:intron 30.0%
! CGATAAACTCTTTTGGATTA+GGG + chr2_1:66735690-66735709 Msa0219240:five_prime_UTR 30.0%
! AATGGAAAGTCTTCATTTTG+AGG + chr2_1:66735977-66735996 Msa0219240:CDS 30.0%
ACGAAAACTTCATTTCCTAA+AGG - chr2_1:66736020-66736039 None:intergenic 30.0%
AGATGTTAAAGAAGAGATTG+AGG + chr2_1:66736055-66736074 Msa0219240:CDS 30.0%
GATGTTAAAGAAGAGATTGA+GGG + chr2_1:66736056-66736075 Msa0219240:CDS 30.0%
ACTTACTACATCATCATAAG+AGG - chr2_1:66736405-66736424 None:intergenic 30.0%
! CGTGTAGGACATAATTTTTA+TGG + chr2_1:66736567-66736586 Msa0219240:intron 30.0%
CAAACAACTCTTTCAAAACT+AGG - chr2_1:66736809-66736828 None:intergenic 30.0%
! GTTTGTTAGGTTTCCTATAT+TGG + chr2_1:66736824-66736843 Msa0219240:intron 30.0%
ATAAGATATTATCGCAGTGA+AGG - chr2_1:66736951-66736970 None:intergenic 30.0%
TGAAGTAAAAAGAATGTCAG+AGG + chr2_1:66737046-66737065 Msa0219240:CDS 30.0%
TAAAAAGAATGTCAGAGGAT+GGG + chr2_1:66737051-66737070 Msa0219240:CDS 30.0%
! TATCCATATTTCTGCTTTGT+TGG + chr2_1:66737198-66737217 Msa0219240:intron 30.0%
! CTTACTTATTTGATTTCCAC+GGG + chr2_1:66737269-66737288 Msa0219240:intron 30.0%
TATTTATTATGAAGGTCCCT+GGG + chr2_1:66737319-66737338 Msa0219240:intron 30.0%
AGGTTAGCAATTCATATTGA+AGG + chr2_1:66737462-66737481 Msa0219240:intron 30.0%
! GAAGGTTTTTAAATGCATCT+AGG + chr2_1:66737480-66737499 Msa0219240:intron 30.0%
ATAAAACCTAAGCCAACAAA+TGG + chr2_1:66737789-66737808 Msa0219240:intron 30.0%
ATTTCCTTCATTCCATTTGT+TGG - chr2_1:66737804-66737823 None:intergenic 30.0%
GAATGAGCAAATATAATGTC+TGG - chr2_1:66737855-66737874 None:intergenic 30.0%
GACATTATATTTGCTCATTC+TGG + chr2_1:66737855-66737874 Msa0219240:intron 30.0%
GATGTAACACAATACATCAA+GGG - chr2_1:66737888-66737907 None:intergenic 30.0%
TGATGTAACACAATACATCA+AGG - chr2_1:66737889-66737908 None:intergenic 30.0%
!! TTTTCTCATTTTTGTTCAGC+TGG + chr2_1:66737911-66737930 Msa0219240:intron 30.0%
TTCTACAAAAATATTGCCTG+TGG + chr2_1:66737975-66737994 Msa0219240:intron 30.0%
AATTAGAATCCTACCATGAT+GGG - chr2_1:66738021-66738040 None:intergenic 30.0%
!! TTTTCTCACTTTTGCTTAGA+TGG + chr2_1:66738285-66738304 Msa0219240:intron 30.0%
! TAGATGGCATATTTTTCTTC+TGG + chr2_1:66738301-66738320 Msa0219240:intron 30.0%
! ACAAAATTAGTTTGATCACC+AGG - chr2_1:66738369-66738388 None:intergenic 30.0%
GGTATGTCAGAACATAATTT+AGG + chr2_1:66738492-66738511 Msa0219240:intron 30.0%
ACATAATTTAGGCTTCTATG+TGG + chr2_1:66738503-66738522 Msa0219240:intron 30.0%
! AATACATGCTAGGGAAATTT+TGG - chr2_1:66738593-66738612 None:intergenic 30.0%
TACAGCTTTCAAAACATTTG+TGG - chr2_1:66738655-66738674 None:intergenic 30.0%
! AAGCTGTACTTTTGTACTTA+TGG + chr2_1:66738667-66738686 Msa0219240:intron 30.0%
! GAATGTGAATTTTCAACTAC+CGG - chr2_1:66738862-66738881 None:intergenic 30.0%
ATGCAAAATAATCCAGATGT+GGG + chr2_1:66738895-66738914 Msa0219240:intron 30.0%
AACGCGGTTTAAACAAAAAA+GGG - chr2_1:66738944-66738963 None:intergenic 30.0%
ATATCTTGACAAAAACAACG+CGG - chr2_1:66738960-66738979 None:intergenic 30.0%
GAAAATAACTGAATGAAGAG+CGG - chr2_1:66739027-66739046 None:intergenic 30.0%
ATAATCGCCAAATTTCTCAT+AGG - chr2_1:66739154-66739173 None:intergenic 30.0%
GATCGAATAGTCAATAGAAT+TGG + chr2_1:66739217-66739236 Msa0219240:intron 30.0%
! GGGTCTTTGGTATTTAATTT+AGG + chr2_1:66739253-66739272 Msa0219240:intron 30.0%
! TTCCTTTAAAGAAGTGTGTT+TGG + chr2_1:66739323-66739342 Msa0219240:intron 30.0%
ATCTCTTTATCGTATGTGAT+GGG - chr2_1:66739638-66739657 None:intergenic 30.0%
! AAACACATTACAGGATTTTC+TGG + chr2_1:66739865-66739884 Msa0219240:intron 30.0%
!! TTACCTTTCCCTCTAAAATA+AGG + chr2_1:66739933-66739952 Msa0219240:intron 30.0%
!! TACCTTTCCCTCTAAAATAA+GGG + chr2_1:66739934-66739953 Msa0219240:intron 30.0%
!!! AAGTGATCCCTTATTTTAGA+GGG - chr2_1:66739944-66739963 None:intergenic 30.0%
!!! AAAGTGATCCCTTATTTTAG+AGG - chr2_1:66739945-66739964 None:intergenic 30.0%
GTAAATATGTTAACCCTTTC+TGG + chr2_1:66740063-66740082 Msa0219240:intron 30.0%
TCGATTATACATTTCACACA+TGG - chr2_1:66740120-66740139 None:intergenic 30.0%
! GAGTAGGAGTATATATGAAT+AGG - chr2_1:66740143-66740162 None:intergenic 30.0%
! CTTCCATGAAATGTATTGAT+AGG - chr2_1:66740255-66740274 None:intergenic 30.0%
! CAAATTTGTGTTTTGTCAGT+TGG - chr2_1:66740490-66740509 None:intergenic 30.0%
GACAGTTTCCAAGTTATATA+GGG - chr2_1:66740566-66740585 None:intergenic 30.0%
AGACAGTTTCCAAGTTATAT+AGG - chr2_1:66740567-66740586 None:intergenic 30.0%
AACAGAAATTGATTGGAAGA+TGG + chr2_1:66740600-66740619 Msa0219240:intron 30.0%
!! TACTTGCATTATCGATTTGT+TGG - chr2_1:66740705-66740724 None:intergenic 30.0%
AATAGACAGATTCATATGGT+CGG + chr2_1:66741060-66741079 Msa0219240:intron 30.0%
ATGAATATGTTACTGTCGAT+GGG + chr2_1:66741220-66741239 Msa0219240:CDS 30.0%
! ATTTGTTACTTGTTGGAAAC+CGG + chr2_1:66741304-66741323 Msa0219240:CDS 30.0%
AAAAAGAAACGGGAAGAAGA+AGG - chr2_1:66735235-66735254 None:intergenic 35.0%
!!! TCGATTTTTTCGATTCTCAC+AGG + chr2_1:66735330-66735349 Msa0219240:five_prime_UTR 35.0%
CGAATCGTGAAGATTTAACA+GGG - chr2_1:66735380-66735399 None:intergenic 35.0%
TCGAATCGTGAAGATTTAAC+AGG - chr2_1:66735381-66735400 None:intergenic 35.0%
TGGGTCTGATGAGAATTATT+AGG + chr2_1:66735581-66735600 Msa0219240:intron 35.0%
GGGTCTGATGAGAATTATTA+GGG + chr2_1:66735582-66735601 Msa0219240:intron 35.0%
GGTCTGATGAGAATTATTAG+GGG + chr2_1:66735583-66735602 Msa0219240:intron 35.0%
! GCGATAAACTCTTTTGGATT+AGG + chr2_1:66735689-66735708 Msa0219240:five_prime_UTR 35.0%
!! ACTCTTTTGGATTAGGGTTT+TGG + chr2_1:66735696-66735715 Msa0219240:five_prime_UTR 35.0%
!! CTCTTTTGGATTAGGGTTTT+GGG + chr2_1:66735697-66735716 Msa0219240:five_prime_UTR 35.0%
AAAGAGTGATGACCCTTTAA+TGG + chr2_1:66735959-66735978 Msa0219240:CDS 35.0%
AATGATACGCATACTCCTTT+AGG + chr2_1:66736002-66736021 Msa0219240:CDS 35.0%
! AAGTTTTCGTTGATCTTCCT+GGG + chr2_1:66736030-66736049 Msa0219240:CDS 35.0%
TCTTCTTTAACATCTTTCCC+AGG - chr2_1:66736050-66736069 None:intergenic 35.0%
!! AAGTTAGTTGATGAAGGCTT+TGG - chr2_1:66736194-66736213 None:intergenic 35.0%
! AAATTCAAGAAGGAGTGCAT+CGG + chr2_1:66736214-66736233 Msa0219240:CDS 35.0%
TATTCTGCCAAAAGACTTGT+AGG + chr2_1:66736592-66736611 Msa0219240:intron 35.0%
TAGGAATGAGGTGGATAATT+TGG + chr2_1:66736611-66736630 Msa0219240:intron 35.0%
! CTCTTATAGCATTGAAGAGA+AGG - chr2_1:66736638-66736657 None:intergenic 35.0%
AAGTAGCCCAGTTAAATTGT+AGG - chr2_1:66736705-66736724 None:intergenic 35.0%
GTAAAAAGAATGTCAGAGGA+TGG + chr2_1:66737050-66737069 Msa0219240:CDS 35.0%
GGACTCAGAATTGTATGATT+TGG + chr2_1:66737112-66737131 Msa0219240:CDS 35.0%
!! CAGAATTGTATGATTTGGTC+AGG + chr2_1:66737117-66737136 Msa0219240:CDS 35.0%
AGCAGAAATATGGATACTGA+AGG - chr2_1:66737194-66737213 None:intergenic 35.0%
GATCCAACAAAGCAGAAATA+TGG - chr2_1:66737204-66737223 None:intergenic 35.0%
GTATTTATTATGAAGGTCCC+TGG + chr2_1:66737318-66737337 Msa0219240:intron 35.0%
CAGTGACATACTGCATAATT+AGG + chr2_1:66737375-66737394 Msa0219240:intron 35.0%
!!! CCTAGTTTTAAAACCACCTA+TGG - chr2_1:66737422-66737441 None:intergenic 35.0%
!!! CCATAGGTGGTTTTAAAACT+AGG + chr2_1:66737419-66737438 Msa0219240:intron 35.0%
GTAACAAAAGGTCATAAGTC+CGG - chr2_1:66737571-66737590 None:intergenic 35.0%
TGAGAATGAGTTAGTGAGAA+TGG + chr2_1:66737622-66737641 Msa0219240:intron 35.0%
GAGAATGAGTTAGTGAGAAT+GGG + chr2_1:66737623-66737642 Msa0219240:intron 35.0%
AATTGAAACATGAACAGCGT+TGG + chr2_1:66737710-66737729 Msa0219240:intron 35.0%
ACTCTCAGAAGTTAAAGTTC+AGG - chr2_1:66737748-66737767 None:intergenic 35.0%
!! TTCATTCCATTTGTTGGCTT+AGG - chr2_1:66737798-66737817 None:intergenic 35.0%
TAAGCCAACAAATGGAATGA+AGG + chr2_1:66737797-66737816 Msa0219240:intron 35.0%
GAATTAGAATCCTACCATGA+TGG - chr2_1:66738022-66738041 None:intergenic 35.0%
! CTCATTAGATTTGCTCATTC+TGG + chr2_1:66738083-66738102 Msa0219240:intron 35.0%
! CTCATTAGATTTGCTCATTC+TGG + chr2_1:66738083-66738102 Msa0219240:intron 35.0%
CATTCTGATTTCACGTCTTT+AGG + chr2_1:66738393-66738412 Msa0219240:intron 35.0%
! GTTTTACCTCATACTGTAAG+AGG + chr2_1:66738455-66738474 Msa0219240:CDS 35.0%
TAAGAGGAAGAGAAGAGATA+AGG + chr2_1:66738471-66738490 Msa0219240:CDS 35.0%
CTTTAGTGTGCCAATTAATC+CGG + chr2_1:66738733-66738752 Msa0219240:intron 35.0%
GTATAAACTAAATATGGGCC+GGG - chr2_1:66738784-66738803 None:intergenic 35.0%
GGTATAAACTAAATATGGGC+CGG - chr2_1:66738785-66738804 None:intergenic 35.0%
CATGCAAAATAATCCAGATG+TGG + chr2_1:66738894-66738913 Msa0219240:intron 35.0%
CAACGCGGTTTAAACAAAAA+AGG - chr2_1:66738945-66738964 None:intergenic 35.0%
CATCTTAGAAGAGTAAAGCA+TGG - chr2_1:66739073-66739092 None:intergenic 35.0%
CGAATAGTCAATAGAATTGG+CGG + chr2_1:66739220-66739239 Msa0219240:intron 35.0%
GAATAGTCAATAGAATTGGC+GGG + chr2_1:66739221-66739240 Msa0219240:intron 35.0%
AATAGTCAATAGAATTGGCG+GGG + chr2_1:66739222-66739241 Msa0219240:intron 35.0%
! ATTTAATTTAGGTGCAGCAG+TGG + chr2_1:66739264-66739283 Msa0219240:intron 35.0%
! ATTTTACTCCCTTATAGCTG+TGG + chr2_1:66739293-66739312 Msa0219240:intron 35.0%
AGCCAAACACACTTCTTTAA+AGG - chr2_1:66739328-66739347 None:intergenic 35.0%
!! TTGGTAACTCTTGAGTCTTT+TGG + chr2_1:66739425-66739444 Msa0219240:intron 35.0%
CATCTCTTTATCGTATGTGA+TGG - chr2_1:66739639-66739658 None:intergenic 35.0%
TCGTGTATCTCAAATCTCAA+TGG + chr2_1:66739688-66739707 Msa0219240:intron 35.0%
CAAATCTCAATGGACATGTT+AGG + chr2_1:66739698-66739717 Msa0219240:intron 35.0%
TTGACACATTCAAAACCAAG+TGG - chr2_1:66739729-66739748 None:intergenic 35.0%
!!! ATCCCTTATTTTAGAGGGAA+AGG - chr2_1:66739939-66739958 None:intergenic 35.0%
CAACAAACTAAAACTGCATG+TGG - chr2_1:66740000-66740019 None:intergenic 35.0%
!!! CACATGCAGTTTTAGTTTGT+TGG + chr2_1:66739998-66740017 Msa0219240:intron 35.0%
!! TGTTGGCATATGTTGATAGT+TGG + chr2_1:66740015-66740034 Msa0219240:intron 35.0%
TATACATTTCACACATGGCT+TGG - chr2_1:66740115-66740134 None:intergenic 35.0%
GAGCCTATCAATACATTTCA+TGG + chr2_1:66740249-66740268 Msa0219240:intron 35.0%
GGTTACCATGATGAAAACTT+AGG - chr2_1:66740305-66740324 None:intergenic 35.0%
TTATAGAAGCCCCAAAAGAA+AGG + chr2_1:66740539-66740558 Msa0219240:intron 35.0%
TATAGAAGCCCCAAAAGAAA+GGG + chr2_1:66740540-66740559 Msa0219240:intron 35.0%
! TATATAGGGCCCTTTCTTTT+GGG - chr2_1:66740552-66740571 None:intergenic 35.0%
! TTATATAGGGCCCTTTCTTT+TGG - chr2_1:66740553-66740572 None:intergenic 35.0%
ATTGATTGGAAGATGGTTGA+CGG + chr2_1:66740607-66740626 Msa0219240:intron 35.0%
TGTTGACAAAGATCAAGTCA+AGG + chr2_1:66740657-66740676 Msa0219240:intron 35.0%
! TTGTTGCTTAAATGTACCAC+CGG - chr2_1:66740921-66740940 None:intergenic 35.0%
GGTACATTTAAGCAACAACT+TGG + chr2_1:66740923-66740942 Msa0219240:CDS 35.0%
CATGAATATGTTACTGTCGA+TGG + chr2_1:66741219-66741238 Msa0219240:CDS 35.0%
ATTGAGGCATACAGCATATT+TGG + chr2_1:66741262-66741281 Msa0219240:CDS 35.0%
TTGAGGCATACAGCATATTT+GGG + chr2_1:66741263-66741282 Msa0219240:CDS 35.0%
! GAAGGCGATAGCGTTTTTAA+CGG - chr2_1:66735217-66735236 None:intergenic 40.0%
!!! AGGGTTTTGTTTCGGAGAAA+GGG - chr2_1:66735273-66735292 None:intergenic 40.0%
!!! TAGGGTTTTGTTTCGGAGAA+AGG - chr2_1:66735274-66735293 None:intergenic 40.0%
TTTGTAACAAGAATCGCACG+CGG - chr2_1:66735409-66735428 None:intergenic 40.0%
!!! GATGAAGTTTTTTTGGGAGG+TGG + chr2_1:66735451-66735470 Msa0219240:intron 40.0%
TCAACGGTGGTGAAAAATCT+CGG + chr2_1:66735507-66735526 Msa0219240:five_prime_UTR 40.0%
CTGAAGAAATCGTTCAGCAA+AGG + chr2_1:66735634-66735653 Msa0219240:five_prime_UTR 40.0%
! AAATCGTTCAGCAAAGGCAT+TGG + chr2_1:66735640-66735659 Msa0219240:five_prime_UTR 40.0%
! GAACACGCGATAAACTCTTT+TGG + chr2_1:66735683-66735702 Msa0219240:five_prime_UTR 40.0%
ACTCGTATCTATGTTCAACG+TGG + chr2_1:66735735-66735754 Msa0219240:CDS 40.0%
GTTGCTAAGGATGAAGAAAG+TGG + chr2_1:66735870-66735889 Msa0219240:CDS 40.0%
TAAGGATGAAGAAAGTGGAG+AGG + chr2_1:66735875-66735894 Msa0219240:CDS 40.0%
ATGATGTTGTGGAGTATGCT+GGG + chr2_1:66735922-66735941 Msa0219240:CDS 40.0%
AGTATGCTGGGAGTAGTAAT+AGG + chr2_1:66735934-66735953 Msa0219240:CDS 40.0%
GTATGCTGGGAGTAGTAATA+GGG + chr2_1:66735935-66735954 Msa0219240:CDS 40.0%
! GAAGTTTTCGTTGATCTTCC+TGG + chr2_1:66736029-66736048 Msa0219240:CDS 40.0%
!! TTAGTTGATGAAGGCTTTGG+AGG - chr2_1:66736191-66736210 None:intergenic 40.0%
! AATTCAAGAAGGAGTGCATC+GGG + chr2_1:66736215-66736234 Msa0219240:CDS 40.0%
TCTCCTAATGCTGTTAATGC+AGG + chr2_1:66736239-66736258 Msa0219240:CDS 40.0%
GATCCTGCATTAACAGCATT+AGG - chr2_1:66736245-66736264 None:intergenic 40.0%
TCATAAGAGGACACATAGCA+TGG - chr2_1:66736392-66736411 None:intergenic 40.0%
! CCTCATTCCTACAAGTCTTT+TGG - chr2_1:66736602-66736621 None:intergenic 40.0%
CCAAAAGACTTGTAGGAATG+AGG + chr2_1:66736599-66736618 Msa0219240:intron 40.0%
AAAGACTTGTAGGAATGAGG+TGG + chr2_1:66736602-66736621 Msa0219240:intron 40.0%
ATGGTATTTGCATCCATGTC+AGG + chr2_1:66736977-66736996 Msa0219240:intron 40.0%
GCAGATGAGCGTAGATTATA+TGG + chr2_1:66737139-66737158 Msa0219240:CDS 40.0%
TTGATTTCCACGGGTTTGAA+CGG + chr2_1:66737278-66737297 Msa0219240:intron 40.0%
TATCACAACCACAAAACCCA+GGG - chr2_1:66737338-66737357 None:intergenic 40.0%
TTATCACAACCACAAAACCC+AGG - chr2_1:66737339-66737358 None:intergenic 40.0%
GTTATCATAAGCTAGACCAG+AGG - chr2_1:66737946-66737965 None:intergenic 40.0%
TAGTTTGATACACAGTCCAC+AGG - chr2_1:66737994-66738013 None:intergenic 40.0%
ATCAAACTAACCTCCCATCA+TGG + chr2_1:66738005-66738024 Msa0219240:intron 40.0%
GTAGTAGTGCAATAAACCAC+AGG - chr2_1:66738259-66738278 None:intergenic 40.0%
! TGATTTCACGTCTTTAGGAG+CGG + chr2_1:66738398-66738417 Msa0219240:intron 40.0%
TCTCTTCCTCTTACAGTATG+AGG - chr2_1:66738464-66738483 None:intergenic 40.0%
ACAGGAGTGATTTATGCAAC+CGG + chr2_1:66738840-66738859 Msa0219240:intron 40.0%
GGTTTAAACAAAAAAGGGCC+GGG - chr2_1:66738939-66738958 None:intergenic 40.0%
CGGTTTAAACAAAAAAGGGC+CGG - chr2_1:66738940-66738959 None:intergenic 40.0%
AACTTGTGCCACAGCTATAA+GGG - chr2_1:66739304-66739323 None:intergenic 40.0%
AAACTTGTGCCACAGCTATA+AGG - chr2_1:66739305-66739324 None:intergenic 40.0%
ACATGTTAGGAACTTCCACT+TGG + chr2_1:66739711-66739730 Msa0219240:intron 40.0%
AGAGAGATCTCGACAACTAA+TGG + chr2_1:66739804-66739823 Msa0219240:intron 40.0%
! ATATGTTAACCCTTTCTGGC+AGG + chr2_1:66740067-66740086 Msa0219240:intron 40.0%
CATATATACTCCTACTCCAC+AGG + chr2_1:66740146-66740165 Msa0219240:CDS 40.0%
TGTAAGATAAGCTCTACCTG+TGG - chr2_1:66740165-66740184 None:intergenic 40.0%
TGATGAAAACTTAGGCGTAC+TGG - chr2_1:66740297-66740316 None:intergenic 40.0%
! GTACGCCTAAGTTTTCATCA+TGG + chr2_1:66740297-66740316 Msa0219240:CDS 40.0%
! ATATAGGGCCCTTTCTTTTG+GGG - chr2_1:66740551-66740570 None:intergenic 40.0%
AGAAAGGGCCCTATATAACT+TGG + chr2_1:66740555-66740574 Msa0219240:intron 40.0%
! TTTTACAACTCCCTTCTGAC+AGG + chr2_1:66740799-66740818 Msa0219240:intron 40.0%
!! GAGATATTAACTTGCTCCAG+AGG - chr2_1:66740987-66741006 None:intergenic 40.0%
! AGATTCATATGGTCGGTTCT+TGG + chr2_1:66741067-66741086 Msa0219240:intron 40.0%
!! TGGTGGACTATAAGCTAACT+TGG + chr2_1:66741112-66741131 Msa0219240:intron 40.0%
GGTGTATTAATGTGAGTTGC+AGG + chr2_1:66741133-66741152 Msa0219240:intron 40.0%
TAGTTACCTACAAGCGATTG+AGG + chr2_1:66741246-66741265 Msa0219240:CDS 40.0%
TGAGGCATACAGCATATTTG+GGG + chr2_1:66741264-66741283 Msa0219240:CDS 40.0%
! AGAGGTTTGGTTATGACACG+TGG - chr2_1:66735165-66735184 None:intergenic 45.0%
! ATAGCGTTTTTAACGGTGGG+AGG - chr2_1:66735210-66735229 None:intergenic 45.0%
! GCGATAGCGTTTTTAACGGT+GGG - chr2_1:66735213-66735232 None:intergenic 45.0%
!!! GGTTTTGTTTCGGAGAAAGG+GGG - chr2_1:66735271-66735290 None:intergenic 45.0%
!!! GGGTTTTGTTTCGGAGAAAG+GGG - chr2_1:66735272-66735291 None:intergenic 45.0%
!!! TTTTTTTGGGAGGTGGTTGC+AGG + chr2_1:66735458-66735477 Msa0219240:intron 45.0%
!! GCAGAGAACGTTTTATTGCG+AGG + chr2_1:66735609-66735628 Msa0219240:intron 45.0%
CACGATTAGGGTTAGGGTTA+GGG - chr2_1:66735803-66735822 None:intergenic 45.0%
AAGAAGACCCAGCACGATTA+GGG - chr2_1:66735815-66735834 None:intergenic 45.0%
TAATCGTGCTGGGTCTTCTT+CGG + chr2_1:66735815-66735834 Msa0219240:CDS 45.0%
ACAGGTGCAATCTGTTGCTA+AGG + chr2_1:66735857-66735876 Msa0219240:CDS 45.0%
!! GGTTGTTGGTGATGATGTTG+TGG + chr2_1:66735911-66735930 Msa0219240:CDS 45.0%
GATGATGTTGTGGAGTATGC+TGG + chr2_1:66735921-66735940 Msa0219240:CDS 45.0%
TTGAGGGTTTGCAAGAATCG+AGG + chr2_1:66736072-66736091 Msa0219240:CDS 45.0%
TGAGGGTTTGCAAGAATCGA+GGG + chr2_1:66736073-66736092 Msa0219240:CDS 45.0%
GTTTGCAAGAATCGAGGGAA+AGG + chr2_1:66736078-66736097 Msa0219240:CDS 45.0%
GAGGGTAATCCTGTTGTTAG+CGG + chr2_1:66736128-66736147 Msa0219240:CDS 45.0%
! ATTCAAGAAGGAGTGCATCG+GGG + chr2_1:66736216-66736235 Msa0219240:CDS 45.0%
CTGTTAATGCAGGATCACCA+AGG + chr2_1:66736249-66736268 Msa0219240:CDS 45.0%
TTCACTTTCACTATGAGCCC+GGG - chr2_1:66736342-66736361 None:intergenic 45.0%
CTTCACTTTCACTATGAGCC+CGG - chr2_1:66736343-66736362 None:intergenic 45.0%
GGGCTCATAGTGAAAGTGAA+GGG + chr2_1:66736342-66736361 Msa0219240:CDS 45.0%
TTTATATCCCCAGTTAGGCG+AGG + chr2_1:66736495-66736514 Msa0219240:intron 45.0%
TTATATCCCCAGTTAGGCGA+GGG + chr2_1:66736496-66736515 Msa0219240:intron 45.0%
TAAACTCGCTTGCATCATCG+CGG + chr2_1:66736783-66736802 Msa0219240:intron 45.0%
AACGGTCTTCTCCCAAAAAG+CGG + chr2_1:66737296-66737315 Msa0219240:intron 45.0%
TAAAACCACCTATGGCAGAC+TGG - chr2_1:66737414-66737433 None:intergenic 45.0%
TTCACTAAGTCTATGCACGC+CGG + chr2_1:66737504-66737523 Msa0219240:intron 45.0%
! CATGAACAGCGTTGGAGATA+AGG + chr2_1:66737718-66737737 Msa0219240:intron 45.0%
AGCTAGACCAGAGGAGAAAT+GGG - chr2_1:66737937-66737956 None:intergenic 45.0%
AAGCTAGACCAGAGGAGAAA+TGG - chr2_1:66737938-66737957 None:intergenic 45.0%
AACTAACCTCCCATCATGGT+AGG + chr2_1:66738009-66738028 Msa0219240:intron 45.0%
! TAGAATCCTACCATGATGGG+AGG - chr2_1:66738018-66738037 None:intergenic 45.0%
GCGGTATAAATGCAACCTCA+TGG + chr2_1:66738136-66738155 Msa0219240:intron 45.0%
CTTGCTCACCCACTATATGA+AGG + chr2_1:66738165-66738184 Msa0219240:intron 45.0%
! TCATTCTGGTTACACTCCTG+TGG + chr2_1:66738240-66738259 Msa0219240:intron 45.0%
! GATTTCACGTCTTTAGGAGC+GGG + chr2_1:66738399-66738418 Msa0219240:intron 45.0%
GAACAATCACAACCCACATC+TGG - chr2_1:66738910-66738929 None:intergenic 45.0%
TTGTGATTGTTCCCTTCTCC+CGG + chr2_1:66738918-66738937 Msa0219240:intron 45.0%
ACTGAATGAAGAGCGGAAAG+TGG - chr2_1:66739020-66739039 None:intergenic 45.0%
CATGGCACAATGTAACTAGC+AGG - chr2_1:66739055-66739074 None:intergenic 45.0%
AGAATTGGCGGGGATATACT+TGG + chr2_1:66739232-66739251 Msa0219240:intron 45.0%
GAATTGGCGGGGATATACTT+GGG + chr2_1:66739233-66739252 Msa0219240:intron 45.0%
! AACCCTTTCTGGCAGGTTTA+TGG + chr2_1:66740074-66740093 Msa0219240:intron 45.0%
! ACCCTTTCTGGCAGGTTTAT+GGG + chr2_1:66740075-66740094 Msa0219240:intron 45.0%
TCCCATAAACCTGCCAGAAA+GGG - chr2_1:66740079-66740098 None:intergenic 45.0%
TTCCCATAAACCTGCCAGAA+AGG - chr2_1:66740080-66740099 None:intergenic 45.0%
ATAAGCTCTACCTGTGGAGT+AGG - chr2_1:66740159-66740178 None:intergenic 45.0%
TGAAAACTTAGGCGTACTGG+TGG - chr2_1:66740294-66740313 None:intergenic 45.0%
GGTCAACAAGGGAGTTGTAA+TGG - chr2_1:66740326-66740345 None:intergenic 45.0%
!! GCTAAAAGTGCCTGTCAGAA+GGG - chr2_1:66740812-66740831 None:intergenic 45.0%
!! AGCTAAAAGTGCCTGTCAGA+AGG - chr2_1:66740813-66740832 None:intergenic 45.0%
!! TGACAGGCACTTTTAGCTGA+GGG + chr2_1:66740815-66740834 Msa0219240:intron 45.0%
TGATCTTGAGCTCACAGAGA+AGG + chr2_1:66740850-66740869 Msa0219240:CDS 45.0%
GGAAATTGAACTTGCCGTGA+TGG + chr2_1:66740871-66740890 Msa0219240:CDS 45.0%
!! TAACTTGCTCCAGAGGAAGA+TGG - chr2_1:66740980-66740999 None:intergenic 45.0%
TCTTTCCCACTTTCCATCCT+GGG - chr2_1:66741175-66741194 None:intergenic 45.0%
TTCTTTCCCACTTTCCATCC+TGG - chr2_1:66741176-66741195 None:intergenic 45.0%
TGTATGCCTCAATCGCTTGT+AGG - chr2_1:66741255-66741274 None:intergenic 45.0%
CAGTAGCAGACGTAAAGGAA+AGG + chr2_1:66741330-66741349 Msa0219240:CDS 45.0%
!!! AATATTTTAATAGAATTAAA+AGG - chr2_1:66738345-66738364 None:intergenic 5.0%
TGGCACGTGAGATAGAGGTT+TGG - chr2_1:66735178-66735197 None:intergenic 50.0%
! GGCGATAGCGTTTTTAACGG+TGG - chr2_1:66735214-66735233 None:intergenic 50.0%
GGAGGAGGAAGCTGAATCAA+CGG + chr2_1:66735491-66735510 Msa0219240:five_prime_UTR 50.0%
CATTGGAATCACTGCTCCCA+GGG + chr2_1:66735657-66735676 Msa0219240:five_prime_UTR 50.0%
TTATCGCGTGTTCTTGCCCT+GGG - chr2_1:66735676-66735695 None:intergenic 50.0%
TTTATCGCGTGTTCTTGCCC+TGG - chr2_1:66735677-66735696 None:intergenic 50.0%
GTTCAACGTGGTTCTTCTGC+TGG + chr2_1:66735747-66735766 Msa0219240:CDS 50.0%
GCACGATTAGGGTTAGGGTT+AGG - chr2_1:66735804-66735823 None:intergenic 50.0%
AACCCTAACCCTAATCGTGC+TGG + chr2_1:66735804-66735823 Msa0219240:CDS 50.0%
ACCCTAACCCTAATCGTGCT+GGG + chr2_1:66735805-66735824 Msa0219240:CDS 50.0%
ACCCAGCACGATTAGGGTTA+GGG - chr2_1:66735809-66735828 None:intergenic 50.0%
GAAGAAGACCCAGCACGATT+AGG - chr2_1:66735816-66735835 None:intergenic 50.0%
GGATGAAGAAAGTGGAGAGG+AGG + chr2_1:66735878-66735897 Msa0219240:CDS 50.0%
!! GAGGAGCTTGGATTGGTTGT+TGG + chr2_1:66735897-66735916 Msa0219240:CDS 50.0%
AAGGCCAGTGATAGAGAACG+AGG + chr2_1:66736097-66736116 Msa0219240:CDS 50.0%
AGGCCAGTGATAGAGAACGA+GGG + chr2_1:66736098-66736117 Msa0219240:CDS 50.0%
AAGCCCTCGTTCTCTATCAC+TGG - chr2_1:66736104-66736123 None:intergenic 50.0%
GGTAATCCTGTTGTTAGCGG+TGG + chr2_1:66736131-66736150 Msa0219240:CDS 50.0%
AATCCTGTTGTTAGCGGTGG+TGG + chr2_1:66736134-66736153 Msa0219240:CDS 50.0%
!! GTTGATGAAGGCTTTGGAGG+TGG - chr2_1:66736188-66736207 None:intergenic 50.0%
AATGCAGGATCACCAAGGAG+AGG + chr2_1:66736254-66736273 Msa0219240:CDS 50.0%
!! TGCGTGGCCTGTTGTTGTTT+CGG + chr2_1:66736280-66736299 Msa0219240:CDS 50.0%
GTCCTAGCCGAAACAACAAC+AGG - chr2_1:66736290-66736309 None:intergenic 50.0%
TCACTTTCACTATGAGCCCG+GGG - chr2_1:66736341-66736360 None:intergenic 50.0%
CGGGCTCATAGTGAAAGTGA+AGG + chr2_1:66736341-66736360 Msa0219240:CDS 50.0%
AACAACTCCCTCGCCTAACT+GGG - chr2_1:66736506-66736525 None:intergenic 50.0%
TAACAACTCCCTCGCCTAAC+TGG - chr2_1:66736507-66736526 None:intergenic 50.0%
AGTTAGGCGAGGGAGTTGTT+AGG + chr2_1:66736506-66736525 Msa0219240:intron 50.0%
CGTATCGCGAACAAGGTCAT+TGG - chr2_1:66736549-66736568 None:intergenic 50.0%
ACCTTGTTCGCGATACGTGT+AGG + chr2_1:66736552-66736571 Msa0219240:intron 50.0%
TCCTACACGTATCGCGAACA+AGG - chr2_1:66736556-66736575 None:intergenic 50.0%
TGTCGCTCTCTTTCCTGACA+TGG - chr2_1:66736993-66737012 None:intergenic 50.0%
ACACTTGGTCTGCAACAGCA+CGG - chr2_1:66737088-66737107 None:intergenic 50.0%
GCTGTTGCAGACCAAGTGTA+CGG + chr2_1:66737089-66737108 Msa0219240:CDS 50.0%
CTGTTGCAGACCAAGTGTAC+GGG + chr2_1:66737090-66737109 Msa0219240:CDS 50.0%
TGTTGCAGACCAAGTGTACG+GGG + chr2_1:66737091-66737110 Msa0219240:CDS 50.0%
ATTCTGAGTCCCCGTACACT+TGG - chr2_1:66737103-66737122 None:intergenic 50.0%
! ATGAAGGTCCCTGGGTTTTG+TGG + chr2_1:66737327-66737346 Msa0219240:intron 50.0%
TCATTCTGGTCACACTCCTG+TGG + chr2_1:66738097-66738116 Msa0219240:intron 50.0%
GTGAGCAAGAAACGTCCATG+AGG - chr2_1:66738154-66738173 None:intergenic 50.0%
AAACCTACGCCTGCATTTGC+TGG + chr2_1:66738541-66738560 Msa0219240:intron 50.0%
AACCTACGCCTGCATTTGCT+GGG + chr2_1:66738542-66738561 Msa0219240:intron 50.0%
CCTAAAAGCCCAGCAAATGC+AGG - chr2_1:66738553-66738572 None:intergenic 50.0%
!! CCTGCATTTGCTGGGCTTTT+AGG + chr2_1:66738550-66738569 Msa0219240:intron 50.0%
TGTGCCAATTAATCCGGCTG+TGG + chr2_1:66738739-66738758 Msa0219240:intron 50.0%
GTGCCAATTAATCCGGCTGT+GGG + chr2_1:66738740-66738759 Msa0219240:intron 50.0%
GAACCCACAGCCGGATTAAT+TGG - chr2_1:66738746-66738765 None:intergenic 50.0%
GAACAATCAGAACCCACAGC+CGG - chr2_1:66738755-66738774 None:intergenic 50.0%
ACAAAAAAGGGCCGGGAGAA+GGG - chr2_1:66738932-66738951 None:intergenic 50.0%
AACAAAAAAGGGCCGGGAGA+AGG - chr2_1:66738933-66738952 None:intergenic 50.0%
CGGGGATATACTTGGGTCTT+TGG + chr2_1:66739240-66739259 Msa0219240:intron 50.0%
! TAGGCGTACTGGTGGTGTAT+CGG - chr2_1:66740286-66740305 None:intergenic 50.0%
ACAACTCCCTTGTTGACCCA+CGG + chr2_1:66740328-66740347 Msa0219240:CDS 50.0%
CCAAGTCCTGCACCAATTGT+GGG - chr2_1:66740357-66740376 None:intergenic 50.0%
CCACAATTGGTGCAGGACTT+GGG + chr2_1:66740355-66740374 Msa0219240:CDS 50.0%
TTGGGTTCAGCTCTCTTCGT+GGG + chr2_1:66740373-66740392 Msa0219240:CDS 50.0%
!! CTGACAGGCACTTTTAGCTG+AGG + chr2_1:66740814-66740833 Msa0219240:intron 50.0%
!! GACAGGCACTTTTAGCTGAG+GGG + chr2_1:66740816-66740835 Msa0219240:intron 50.0%
! TTGCCGTGATGGAAGCTTCT+CGG + chr2_1:66740882-66740901 Msa0219240:CDS 50.0%
GCTTAAATGTACCACCGGCA+AGG - chr2_1:66740916-66740935 None:intergenic 50.0%
ATGTGAGTTGCAGGATCGTC+AGG + chr2_1:66741142-66741161 Msa0219240:intron 50.0%
AGTGATCCCAGGATGGAAAG+TGG + chr2_1:66741166-66741185 Msa0219240:CDS 50.0%
GTGATCCCAGGATGGAAAGT+GGG + chr2_1:66741167-66741186 Msa0219240:CDS 50.0%
TTTACGTCTGCTACTGCTGC+CGG - chr2_1:66741326-66741345 None:intergenic 50.0%
GAGAGTGGCACGTGAGATAG+AGG - chr2_1:66735183-66735202 None:intergenic 55.0%
ACGGTGGGAGGAAAAGAGAG+TGG - chr2_1:66735198-66735217 None:intergenic 55.0%
GGAGGAAGCTGAATCAACGG+TGG + chr2_1:66735494-66735513 Msa0219240:five_prime_UTR 55.0%
GCATTGGAATCACTGCTCCC+AGG + chr2_1:66735656-66735675 Msa0219240:five_prime_UTR 55.0%
GACCCAGCACGATTAGGGTT+AGG - chr2_1:66735810-66735829 None:intergenic 55.0%
TGCACCTGTGTAACGTGCTC+CGG - chr2_1:66735846-66735865 None:intergenic 55.0%
GAAAGTGGAGAGGAGGAGCT+TGG + chr2_1:66735885-66735904 Msa0219240:CDS 55.0%
TGGAGAGGAGGAGCTTGGAT+TGG + chr2_1:66735890-66735909 Msa0219240:CDS 55.0%
AGAGAACGAGGGCTTGTGTG+AGG + chr2_1:66736109-66736128 Msa0219240:CDS 55.0%
GAGAACGAGGGCTTGTGTGA+GGG + chr2_1:66736110-66736129 Msa0219240:CDS 55.0%
TTTGGAGGTGGAACAGGTGG+AGG - chr2_1:66736176-66736195 None:intergenic 55.0%
!! GAAGGCTTTGGAGGTGGAAC+AGG - chr2_1:66736182-66736201 None:intergenic 55.0%
!! GGCCTGTTGTTGTTTCGGCT+AGG + chr2_1:66736285-66736304 Msa0219240:CDS 55.0%
ACAACTCCCTCGCCTAACTG+GGG - chr2_1:66736505-66736524 None:intergenic 55.0%
GGTCTGCAACAGCACGGAAA+AGG - chr2_1:66737082-66737101 None:intergenic 55.0%
GAGAAGACCGTTCAAACCCG+TGG - chr2_1:66737288-66737307 None:intergenic 55.0%
TGCCACTACCAGTCTGCCAT+AGG + chr2_1:66737403-66737422 Msa0219240:intron 55.0%
CACCTATGGCAGACTGGTAG+TGG - chr2_1:66737408-66737427 None:intergenic 55.0%
CACTACCAGTCTGCCATAGG+TGG + chr2_1:66737406-66737425 Msa0219240:intron 55.0%
AAATTCATGCTGCCAGCCCC+AGG - chr2_1:66737534-66737553 None:intergenic 55.0%
! ACGTCTTTAGGAGCGGGAGA+GGG + chr2_1:66738405-66738424 Msa0219240:intron 55.0%
TTCTGATTGTTCCCCTCGCC+CGG + chr2_1:66738763-66738782 Msa0219240:intron 55.0%
ACTAAATATGGGCCGGGCGA+GGG - chr2_1:66738778-66738797 None:intergenic 55.0%
AACTAAATATGGGCCGGGCG+AGG - chr2_1:66738779-66738798 None:intergenic 55.0%
CCCACAATTGGTGCAGGACT+TGG + chr2_1:66740354-66740373 Msa0219240:CDS 55.0%
CCCAAGTCCTGCACCAATTG+TGG - chr2_1:66740358-66740377 None:intergenic 55.0%
CTTGGGTTCAGCTCTCTTCG+TGG + chr2_1:66740372-66740391 Msa0219240:CDS 55.0%
TGGGTTCAGCTCTCTTCGTG+GGG + chr2_1:66740374-66740393 Msa0219240:CDS 55.0%
!! AGGCACTTTTAGCTGAGGGG+CGG + chr2_1:66740819-66740838 Msa0219240:intron 55.0%
! TGCCGTGATGGAAGCTTCTC+GGG + chr2_1:66740883-66740902 Msa0219240:CDS 55.0%
AGCCCGAGAAGCTTCCATCA+CGG - chr2_1:66740888-66740907 None:intergenic 55.0%
TCTCGGGCTGAATACCTTGC+CGG + chr2_1:66740899-66740918 Msa0219240:CDS 55.0%
ACTGCTGAGCCATCTTCCTC+TGG + chr2_1:66740968-66740987 Msa0219240:CDS 55.0%
GATCGTCAGGTAGTGATCCC+AGG + chr2_1:66741155-66741174 Msa0219240:CDS 55.0%
GTCAGGTAGTGATCCCAGGA+TGG + chr2_1:66741159-66741178 Msa0219240:CDS 55.0%
GGCAGCAGTAGCAGACGTAA+AGG + chr2_1:66741325-66741344 Msa0219240:CDS 55.0%
TGGGAGGTGGTTGCAGGTTG+CGG + chr2_1:66735464-66735483 Msa0219240:intron 60.0%
GTGGTTGCAGGTTGCGGTTG+CGG + chr2_1:66735470-66735489 Msa0219240:intron 60.0%
CCACCACCACCGCTAACAAC+AGG - chr2_1:66736140-66736159 None:intergenic 60.0%
! CCTGTTGTTAGCGGTGGTGG+TGG + chr2_1:66736137-66736156 Msa0219240:CDS 60.0%
!! GGCTTTGGAGGTGGAACAGG+TGG - chr2_1:66736179-66736198 None:intergenic 60.0%
CACCAAGGAGAGGATCTGCG+TGG + chr2_1:66736264-66736283 Msa0219240:CDS 60.0%
GATGAAGGTCGAGACCCAGC+AGG - chr2_1:66736317-66736336 None:intergenic 60.0%
GGTCTCGACCTTCATCTCCC+CGG + chr2_1:66736321-66736340 Msa0219240:CDS 60.0%
GTCTCGACCTTCATCTCCCC+GGG + chr2_1:66736322-66736341 Msa0219240:CDS 60.0%
CTATGAGCCCGGGGAGATGA+AGG - chr2_1:66736332-66736351 None:intergenic 60.0%
TCTATGCACGCCGGAATGCC+TGG + chr2_1:66737513-66737532 Msa0219240:intron 60.0%
CTATGCACGCCGGAATGCCT+GGG + chr2_1:66737514-66737533 Msa0219240:intron 60.0%
TATGCACGCCGGAATGCCTG+GGG + chr2_1:66737515-66737534 Msa0219240:intron 60.0%
CAGCTGGCCCATTTCTCCTC+TGG + chr2_1:66737927-66737946 Msa0219240:intron 60.0%
! CACGTCTTTAGGAGCGGGAG+AGG + chr2_1:66738404-66738423 Msa0219240:intron 60.0%
AGCCCAGCAAATGCAGGCGT+AGG - chr2_1:66738547-66738566 None:intergenic 60.0%
CTAAATATGGGCCGGGCGAG+GGG - chr2_1:66738777-66738796 None:intergenic 60.0%
CACCAATTGTGGGACGCCGT+GGG - chr2_1:66740347-66740366 None:intergenic 60.0%
AACTTGACGGCTGACGCTGC+TGG + chr2_1:66740775-66740794 Msa0219240:intron 60.0%
GTTGCAGGTTGCGGTTGCGG+AGG + chr2_1:66735473-66735492 Msa0219240:intron 65.0%
GTGCTGGGTCTTCTTCGGCC+CGG + chr2_1:66735820-66735839 Msa0219240:CDS 65.0%
CTGTGTAACGTGCTCCGGCC+GGG - chr2_1:66735841-66735860 None:intergenic 65.0%
CCTGTGTAACGTGCTCCGGC+CGG - chr2_1:66735842-66735861 None:intergenic 65.0%
GGTGGAACAGGTGGAGGTGG+AGG - chr2_1:66736170-66736189 None:intergenic 65.0%
GGAGGTGGAACAGGTGGAGG+TGG - chr2_1:66736173-66736192 None:intergenic 65.0%
GGCCACGCAGATCCTCTCCT+TGG - chr2_1:66736269-66736288 None:intergenic 65.0%
TCGGCTAGGACTTCGCCTGC+TGG + chr2_1:66736299-66736318 Msa0219240:CDS 65.0%
CGGCTAGGACTTCGCCTGCT+GGG + chr2_1:66736300-66736319 Msa0219240:CDS 65.0%
GGGACGCCGTGGGTCAACAA+GGG - chr2_1:66740337-66740356 None:intergenic 65.0%
TGGGACGCCGTGGGTCAACA+AGG - chr2_1:66740338-66740357 None:intergenic 65.0%
GACCCACGGCGTCCCACAAT+TGG + chr2_1:66740342-66740361 Msa0219240:CDS 65.0%
GCACCAATTGTGGGACGCCG+TGG - chr2_1:66740348-66740367 None:intergenic 65.0%
CGGCGTCCCACAATTGGTGC+AGG + chr2_1:66740348-66740367 Msa0219240:CDS 65.0%
CGGGCTGAATACCTTGCCGG+TGG + chr2_1:66740902-66740921 Msa0219240:CDS 65.0%
GCAGGTTGCGGTTGCGGAGG+AGG + chr2_1:66735476-66735495 Msa0219240:intron 70.0%
TGGGTCTTCTTCGGCCCGGC+CGG + chr2_1:66735824-66735843 Msa0219240:CDS 70.0%
CCGGCCGGAGCACGTTACAC+AGG + chr2_1:66735839-66735858 Msa0219240:CDS 70.0%
GCTGCCAGCCCCAGGCATTC+CGG - chr2_1:66737526-66737545 None:intergenic 70.0%
CACGCCGGAATGCCTGGGGC+TGG + chr2_1:66737519-66737538 Msa0219240:intron 75.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 66735147 66741635 66735147 ID=Msa0219240;Name=Msa0219240
chr2_1 mRNA 66735147 66741635 66735147 ID=Msa0219240-mRNA-1;Parent=Msa0219240;Name=Msa0219240-mRNA-1;_AED=0.15;_eAED=0.15;_QI=373|0.87|1|1|0.75|0.66|9|272|511
chr2_1 exon 66735147 66735351 66735147 ID=Msa0219240-mRNA-1:exon:18841;Parent=Msa0219240-mRNA-1
chr2_1 exon 66735480 66735528 66735480 ID=Msa0219240-mRNA-1:exon:18842;Parent=Msa0219240-mRNA-1
chr2_1 exon 66735613 66736418 66735613 ID=Msa0219240-mRNA-1:exon:18843;Parent=Msa0219240-mRNA-1
chr2_1 exon 66736999 66737160 66736999 ID=Msa0219240-mRNA-1:exon:18844;Parent=Msa0219240-mRNA-1
chr2_1 exon 66738415 66738492 66738415 ID=Msa0219240-mRNA-1:exon:18845;Parent=Msa0219240-mRNA-1
chr2_1 exon 66740089 66740167 66740089 ID=Msa0219240-mRNA-1:exon:18846;Parent=Msa0219240-mRNA-1
chr2_1 exon 66740250 66740395 66740250 ID=Msa0219240-mRNA-1:exon:18847;Parent=Msa0219240-mRNA-1
chr2_1 exon 66740821 66740995 66740821 ID=Msa0219240-mRNA-1:exon:18848;Parent=Msa0219240-mRNA-1
chr2_1 exon 66741155 66741635 66741155 ID=Msa0219240-mRNA-1:exon:18849;Parent=Msa0219240-mRNA-1
chr2_1 five_prime_UTR 66735147 66735351 66735147 ID=Msa0219240-mRNA-1:five_prime_utr;Parent=Msa0219240-mRNA-1
chr2_1 five_prime_UTR 66735480 66735528 66735480 ID=Msa0219240-mRNA-1:five_prime_utr;Parent=Msa0219240-mRNA-1
chr2_1 five_prime_UTR 66735613 66735731 66735613 ID=Msa0219240-mRNA-1:five_prime_utr;Parent=Msa0219240-mRNA-1
chr2_1 CDS 66735732 66736418 66735732 ID=Msa0219240-mRNA-1:cds;Parent=Msa0219240-mRNA-1
chr2_1 CDS 66736999 66737160 66736999 ID=Msa0219240-mRNA-1:cds;Parent=Msa0219240-mRNA-1
chr2_1 CDS 66738415 66738492 66738415 ID=Msa0219240-mRNA-1:cds;Parent=Msa0219240-mRNA-1
chr2_1 CDS 66740089 66740167 66740089 ID=Msa0219240-mRNA-1:cds;Parent=Msa0219240-mRNA-1
chr2_1 CDS 66740250 66740395 66740250 ID=Msa0219240-mRNA-1:cds;Parent=Msa0219240-mRNA-1
chr2_1 CDS 66740821 66740995 66740821 ID=Msa0219240-mRNA-1:cds;Parent=Msa0219240-mRNA-1
chr2_1 CDS 66741155 66741363 66741155 ID=Msa0219240-mRNA-1:cds;Parent=Msa0219240-mRNA-1
chr2_1 three_prime_UTR 66741364 66741635 66741364 ID=Msa0219240-mRNA-1:three_prime_utr;Parent=Msa0219240-mRNA-1
Gene Sequence

>Msa0219240

ATGACTCGTATCTATGTTCAACGTGGTTCTTCTGCTGGTAGCAATAGTACTCAGAACACTAATTCTAACCCTAACCCTAACCCTAATCGTGCTGGGTCTTCTTCGGCCCGGCCGGAGCACGTTACACAGGTGCAATCTGTTGCTAAGGATGAAGAAAGTGGAGAGGAGGAGCTTGGATTGGTTGTTGGTGATGATGTTGTGGAGTATGCTGGGAGTAGTAATAGGGCAAAGAGTGATGACCCTTTAATGGAAAGTCTTCATTTTGAGGAGAATGATACGCATACTCCTTTAGGAAATGAAGTTTTCGTTGATCTTCCTGGGAAAGATGTTAAAGAAGAGATTGAGGGTTTGCAAGAATCGAGGGAAAGGCCAGTGATAGAGAACGAGGGCTTGTGTGAGGGTAATCCTGTTGTTAGCGGTGGTGGTGGTTCGTCTCCTCCACCTCCACCTGTTCCACCTCCAAAGCCTTCATCAACTAACTTAAATTCAAGAAGGAGTGCATCGGGGTCTCCTAATGCTGTTAATGCAGGATCACCAAGGAGAGGATCTGCGTGGCCTGTTGTTGTTTCGGCTAGGACTTCGCCTGCTGGGTCTCGACCTTCATCTCCCCGGGCTCATAGTGAAAGTGAAGGGTATAATAGTGCTGATGAACAGAATCCATGCTATGTGTCCTCTTATGATGATGTAGAAAGAGAGCGACAGTTTGAAATTGATATTAGAAGGGTAAAAGGCTTTGAAGTAAAAAGAATGTCAGAGGATGGGAATTGCCTTTTCCGTGCTGTTGCAGACCAAGTGTACGGGGACTCAGAATTGTATGATTTGGTCAGGCAGATGAGCGTAGATTATATGGAGCGGGAGAGGGATCACTTTTCTCAATTTATAACAGAAGGTTTTACCTCATACTGTAAGAGGAAGAGAAGAGATAAGGTTTATGGGAACAATGTTGAGATCCAAGCCATGTGTGAAATGTATAATCGACCTATTCATATATACTCCTACTCCACAGAGCCTATCAATACATTTCATGGAAGTTATGACACCGATACACCACCAGTACGCCTAAGTTTTCATCATGGTAACCATTACAACTCCCTTGTTGACCCACGGCGTCCCACAATTGGTGCAGGACTTGGGTTCAGCTCTCTTCGTGGGGCACTTTTAGCTGAGGGGCGGTTTTACTCTGATCTTGAGCTCACAGAGAAGGAAATTGAACTTGCCGTGATGGAAGCTTCTCGGGCTGAATACCTTGCCGGTGGTACATTTAAGCAACAACTTGGCAATCGAGAGTCGTCTACGTCAACTGCTGAGCCATCTTCCTCTGGAGCAAGATCGTCAGGTAGTGATCCCAGGATGGAAAGTGGGAAAGAAAATAATTCTAATCTTAGCAGCAGCATGAATATGTTACTGTCGATGGGATTTAGTTACCTACAAGCGATTGAGGCATACAGCATATTTGGGGATGATGTTGATTCTATGATTTGTTACTTGTTGGAAACCGGCAGCAGTAGCAGACGTAAAGGAAAGGCTACTGAATGA
Protein sequence

>Msa0219240

MTRIYVQRGSSAGSNSTQNTNSNPNPNPNRAGSSSARPEHVTQVQSVAKDEESGEEELGLVVGDDVVEYAGSSNRAKSDDPLMESLHFEENDTHTPLGNEVFVDLPGKDVKEEIEGLQESRERPVIENEGLCEGNPVVSGGGGSSPPPPPVPPPKPSSTNLNSRRSASGSPNAVNAGSPRRGSAWPVVVSARTSPAGSRPSSPRAHSESEGYNSADEQNPCYVSSYDDVERERQFEIDIRRVKGFEVKRMSEDGNCLFRAVADQVYGDSELYDLVRQMSVDYMERERDHFSQFITEGFTSYCKRKRRDKVYGNNVEIQAMCEMYNRPIHIYSYSTEPINTFHGSYDTDTPPVRLSFHHGNHYNSLVDPRRPTIGAGLGFSSLRGALLAEGRFYSDLELTEKEIELAVMEASRAEYLAGGTFKQQLGNRESSTSTAEPSSSGARSSGSDPRMESGKENNSNLSSSMNMLLSMGFSYLQAIEAYSIFGDDVDSMICYLLETGSSSRRKGKATE*